Citrus Sinensis ID: 020675
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | 2.2.26 [Sep-21-2011] | |||||||
| P40119 | 254 | Protein CbbY, chromosomal | yes | no | 0.297 | 0.377 | 0.333 | 8e-08 | |
| Q04541 | 254 | Protein CbbY, plasmid OS= | yes | no | 0.297 | 0.377 | 0.325 | 1e-07 |
| >sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3 | Back alignment and function desciption |
|---|
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 24/120 (20%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF- 144
A++ +VDG L D + QAFN AF ++GLD W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ESAHLQAFNAAFAEVGLDW-YWDAPLYTRLL-KVAGGKERLMHYWR 59
Query: 145 ---------FNRKNALD-----------EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLT 184
K +D E + + PLRPG+ +D+A G+PL + T
Sbjct: 60 MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGLPLAIAT 119
|
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 24/120 (20%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF- 144
A++ +VDG L D + QAFN AF ++GLD +W AP+YT LL K AG ++R++ +
Sbjct: 3 ALIFDVDGTLADT-ETAHLQAFNAAFAEVGLDW-HWDAPLYTRLL-KVAGGKERLMHYWR 59
Query: 145 ---------FNRKNALD-----------EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLT 184
K +D E + + PLRPG+ + +A G+PL + T
Sbjct: 60 MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGLPLAIAT 119
|
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | ||||||
| 255549546 | 340 | 2-deoxyglucose-6-phosphate phosphatase, | 0.972 | 0.923 | 0.639 | 1e-115 | |
| 224134306 | 380 | predicted protein [Populus trichocarpa] | 0.975 | 0.828 | 0.617 | 1e-104 | |
| 296081418 | 367 | unnamed protein product [Vitis vinifera] | 0.950 | 0.836 | 0.562 | 1e-97 | |
| 225465107 | 376 | PREDICTED: uncharacterized protein LOC10 | 0.950 | 0.816 | 0.562 | 2e-97 | |
| 297791273 | 372 | hypothetical protein ARALYDRAFT_494462 [ | 0.959 | 0.833 | 0.529 | 8e-96 | |
| 30694711 | 372 | CbbY protein-like protein [Arabidopsis t | 0.962 | 0.836 | 0.522 | 8e-95 | |
| 356555851 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.792 | 0.684 | 0.623 | 1e-94 | |
| 356532993 | 371 | PREDICTED: uncharacterized protein LOC10 | 0.792 | 0.690 | 0.620 | 1e-93 | |
| 449433515 | 374 | PREDICTED: uncharacterized protein LOC10 | 0.845 | 0.729 | 0.583 | 2e-91 | |
| 414869086 | 418 | TPA: hypothetical protein ZEAMMB73_04861 | 0.789 | 0.610 | 0.607 | 2e-90 |
| >gi|255549546|ref|XP_002515825.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223545054|gb|EEF46567.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/341 (63%), Positives = 258/341 (75%), Gaps = 27/341 (7%)
Query: 6 TSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVN 65
+SCS+L SLR S ++ + + Q T RN N PSFS +FPRNY GK L N
Sbjct: 4 SSCSILYSLRLSNNF-INYNNKFCSQ-TLPRNCNSFCLGPSFSFSFPRNYKIPGKFLQPN 61
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
++F+SSS QNP +LAVLLEVDGVL+D YR GNRQAFN+AFQKLGLDCANWT PI
Sbjct: 62 GLASFTSSS--PDQNPSLELAVLLEVDGVLMDVYRLGNRQAFNIAFQKLGLDCANWTEPI 119
Query: 126 YTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDAPL 162
Y DL+RKSAGDE+RMLVLFFNR KNA+DEF+ SK APL
Sbjct: 120 YLDLVRKSAGDEERMLVLFFNRIGWPTSLPTSEKGTFVNNILQEKKNAMDEFVMSKSAPL 179
Query: 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222
RPG EDF+DDA NEGIP+++LT+Y KS ++IARS+V+KLG ERI KIKIVG+ EV++SLY
Sbjct: 180 RPGAEDFIDDASNEGIPVVILTSYNKSEEKIARSIVDKLGPERILKIKIVGDAEVKQSLY 239
Query: 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 282
GQ VLGKG+ SG+DEQLA EARKA SA++Q+IAEEVASMLKLSV IDTSS ESL+KIVAA
Sbjct: 240 GQLVLGKGVLSGLDEQLAKEARKAASAERQKIAEEVASMLKLSVQIDTSSSESLEKIVAA 299
Query: 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323
LRAGAEYA V NC LIAGSQSGV+ A++IGMPC+V+RSR
Sbjct: 300 LRAGAEYAGLRVSNCVLIAGSQSGVSAAEKIGMPCIVLRSR 340
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134306|ref|XP_002321787.1| predicted protein [Populus trichocarpa] gi|222868783|gb|EEF05914.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/353 (61%), Positives = 258/353 (73%), Gaps = 38/353 (10%)
Query: 1 MKTSSTSCSLLNSLRFSTAITVSKKSYY--HYQATQLRNHNCLSPFPS------FSSTFP 52
M+ +++SCS+L+ LR S +Y+ HY T RN + S + FSSTF
Sbjct: 1 MEAAASSCSILHPLR-------SSSNYHSKHYTETPPRNSSSSSCCNNLYLGLPFSSTFL 53
Query: 53 RNYNFHGKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQ 112
RNY F GK + N F+ F + QNP + AVLLEVDGVL+DAYR GNR+AFNVAFQ
Sbjct: 54 RNYTFPGKFVQQNLFTTFCLTPSSSKQNPSTEFAVLLEVDGVLIDAYRLGNRRAFNVAFQ 113
Query: 113 KLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----------------------KN 149
KLGLDCANWT PIY DL+RKS GDE+RMLVLFFNR KN
Sbjct: 114 KLGLDCANWTQPIYQDLVRKSDGDEERMLVLFFNRIGWPTSLPTSEKGAFIKSVLREKKN 173
Query: 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209
ALDEF+ASK + LRPGVEDF+DDA N+GIP+++LTAYGKS ++IARS+++KLG ERISK+
Sbjct: 174 ALDEFVASKSSLLRPGVEDFIDDASNKGIPVVILTAYGKSVEKIARSIIDKLGHERISKL 233
Query: 210 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDID 269
KIVGNEEVE+SLYGQ V KGI SG +E+LA EA KAVSAQKQ+IAEEVASMLKLSV +D
Sbjct: 234 KIVGNEEVEKSLYGQLVHHKGILSGTNEELAKEAMKAVSAQKQKIAEEVASMLKLSVSLD 293
Query: 270 TSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
+SS ESL K VAALRAGAEYA V NC LIAGSQSGVAGA++IGMPCVV+RS
Sbjct: 294 SSSSESLQKTVAALRAGAEYAGVSVNNCVLIAGSQSGVAGAEQIGMPCVVLRS 346
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296081418|emb|CBI16769.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 236/345 (68%), Gaps = 38/345 (11%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 3 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 50
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 51 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 110
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDA 160
P+Y DLLRKSAGDE+RML+LFFN+ KNALD+ L SK
Sbjct: 111 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 170
Query: 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 171 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 230
Query: 221 LYGQFVLG--KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 278
YGQ +LG KG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 231 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 290
Query: 279 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ SR
Sbjct: 291 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR 335
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465107|ref|XP_002271573.1| PREDICTED: uncharacterized protein LOC100253116 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 236/345 (68%), Gaps = 38/345 (11%)
Query: 5 STSCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCL-H 63
+ SCS+L+ L F T S ++ + TQL SF TF N +F K H
Sbjct: 12 TVSCSVLHPLPFFD--TCSYNKHFQFLKTQL----------SFLPTFSTNLHFPRKNFPH 59
Query: 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
N +AF S H++ NP ++LA+LLEV+GV+VD Y GNR AFN AF+KLGLDCANW
Sbjct: 60 FNGLTAFRSLPPHNNPNPSQELAILLEVEGVIVDVYWMGNRNAFNTAFRKLGLDCANWPE 119
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDA 160
P+Y DLLRKSAGDE+RML+LFFN+ KNALD+ L SK
Sbjct: 120 PVYLDLLRKSAGDEERMLILFFNKIGWPTSVPTSEQKTFMQNVLREKKNALDDLLVSKGL 179
Query: 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
PLRPGVEDF+DDAYNEGIPL+VLT +S D++ R + +KLG ERISK+KIVGNEEVE+S
Sbjct: 180 PLRPGVEDFIDDAYNEGIPLLVLTPCCESEDKVRRFIADKLGPERISKVKIVGNEEVEQS 239
Query: 221 LYGQFVLG--KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 278
YGQ +LG KG+ SGVDEQLA EA KAVSA+KQ IAEEVAS+LKL V+I + E+L K
Sbjct: 240 SYGQIILGIGKGLLSGVDEQLAKEAIKAVSAEKQRIAEEVASILKLKVEIGSGLHENLPK 299
Query: 279 IVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323
+AAL AG+EYA PV NC LI GSQSGVAGA+R+GMP VV+ SR
Sbjct: 300 TIAALHAGSEYAGVPVNNCVLITGSQSGVAGAERVGMPYVVLHSR 344
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297791273|ref|XP_002863521.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] gi|297309356|gb|EFH39780.1| hypothetical protein ARALYDRAFT_494462 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 180/340 (52%), Positives = 237/340 (69%), Gaps = 30/340 (8%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNC-LSPFPSFSSTFPRNYNFHGKCLHVN 65
SCS+L++L+ S +K S + ++ +H+ F SFS+ FP GKCL +
Sbjct: 5 SCSILDNLQLSC----TKTSLFTQYLSEPSSHDTGRRNFLSFSN-FPGKSQILGKCLRLQ 59
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
FS+ S+ + NP +LAV+LEVDGV++D + NRQAFNVAFQKLGLDCANW P+
Sbjct: 60 RFSSICLSASREDVNPSEELAVILEVDGVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPV 118
Query: 126 YTDLLRKSAGDEDRMLVLFFN-----------------------RKNALDEFLASKDAPL 162
Y+DLLRK A DE++ML+L+FN +KNA+DEFL SK PL
Sbjct: 119 YSDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLMSKSLPL 178
Query: 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222
R GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G EVE+S+Y
Sbjct: 179 RSGVQEFIDNAYTERVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGENEVEQSMY 238
Query: 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 282
GQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV A
Sbjct: 239 GQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVA 298
Query: 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
LRA AE+ PV+NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 299 LRAAAEHIGLPVKNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30694711|ref|NP_199330.2| CbbY protein-like protein [Arabidopsis thaliana] gi|44917581|gb|AAS49115.1| At5g45170 [Arabidopsis thaliana] gi|62321581|dbj|BAD95125.1| putative protein [Arabidopsis thaliana] gi|332007829|gb|AED95212.1| CbbY protein-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 177/339 (52%), Positives = 229/339 (67%), Gaps = 28/339 (8%)
Query: 7 SCSLLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNP 66
SCS+LN+L+ S T Y +++ PF S FP GKCL +
Sbjct: 5 SCSILNNLQISCTKTSIFTQYLSERSSHDTGRRNFLPF----SNFPGKSQILGKCLRLQR 60
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
FS+ S+ + NP + AV+LEVD V++D + NRQAFNVAFQKLGLDCANW P+Y
Sbjct: 61 FSSICLSASREDVNPSEEFAVILEVDRVMIDTWS-SNRQAFNVAFQKLGLDCANWPEPVY 119
Query: 127 TDLLRKSAGDEDRMLVLFFN-----------------------RKNALDEFLASKDAPLR 163
+DLLRK A DE++ML+L+FN +KNA+DEFL SK PLR
Sbjct: 120 SDLLRKGAADEEKMLLLYFNQIGWPSSLPTSEKASFVKSVLREKKNAMDEFLISKSLPLR 179
Query: 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223
GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+ +K++G+ EVE+S+YG
Sbjct: 180 SGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERLPNVKVIGDNEVEQSMYG 239
Query: 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 283
Q VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSVDIDT+S E L+KIV AL
Sbjct: 240 QLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSVDIDTTSSERLEKIVVAL 299
Query: 284 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
RA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 300 RAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555851|ref|XP_003546243.1| PREDICTED: uncharacterized protein LOC100800683 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/279 (62%), Positives = 217/279 (77%), Gaps = 23/279 (8%)
Query: 67 FSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY 126
SA SSS H + + D+AVLLEVDGVL+D++R GNR AFN AF+KLGLDCANWT P+Y
Sbjct: 56 ISASSSSEYHHNSSSSPDIAVLLEVDGVLMDSHRVGNRLAFNKAFEKLGLDCANWTEPVY 115
Query: 127 TDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDAPLR 163
+DL ++SAGDE++M+ L+FNR + AL+EF+ SK PLR
Sbjct: 116 SDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSLPLR 175
Query: 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223
PG+E F+DDAYNEG+P+++LTAYGKSGD I S++EKLG +R K+ IVGN+EVE+SLYG
Sbjct: 176 PGLEQFIDDAYNEGVPVVILTAYGKSGDNITGSIMEKLGDDRSIKVIIVGNKEVEQSLYG 235
Query: 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAAL 283
Q VLGK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDTSS ESL KIVAAL
Sbjct: 236 QLVLGKVIASGLDEELANEAKRAVSAEKQRLAKEVASMLKLSVEIDTSSSESLAKIVAAL 295
Query: 284 RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
RAGAEYA PV NC L+AGSQSGVAG ++GMPCVV+RS
Sbjct: 296 RAGAEYAGIPVCNCVLVAGSQSGVAGGTQVGMPCVVLRS 334
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356532993|ref|XP_003535053.1| PREDICTED: uncharacterized protein LOC100792632 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/282 (62%), Positives = 218/282 (77%), Gaps = 26/282 (9%)
Query: 67 FSAFSSSSGHDSQNPP---RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA 123
SA SS++ H+ N +DLAVLLEV GVL+D++R GNR AFN AF+KLGLDCANWT
Sbjct: 50 ISASSSTAEHNHPNSSSSSQDLAVLLEVQGVLMDSHRVGNRLAFNKAFEKLGLDCANWTE 109
Query: 124 PIYTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDA 160
P+Y+DL ++SAGDE++M+ L+FNR + AL+EF+ SK
Sbjct: 110 PVYSDLSKRSAGDEEKMVFLYFNRIGWPSSLPTNEQGLFAKRVLQQKEKALEEFVMSKSL 169
Query: 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
PLRPG+E F+DDAYNEGIP+++LTAY KSGD IARS++EKLG +R K+ IVGN+EVE+S
Sbjct: 170 PLRPGLEQFIDDAYNEGIPVVILTAYSKSGDNIARSIMEKLGDDRSIKVIIVGNKEVEQS 229
Query: 221 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIV 280
LYGQ V GK I+SG+DE+LA EA++AVSA+KQ +A+EVASMLKLSV+IDT S ESL KIV
Sbjct: 230 LYGQLVSGKVIASGLDEELAKEAKRAVSAEKQRLAKEVASMLKLSVEIDTGSSESLAKIV 289
Query: 281 AALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
AALRAGAEYA PV NC L+AGSQSGVAGA ++GMPCVV+RS
Sbjct: 290 AALRAGAEYAGIPVCNCVLVAGSQSGVAGATQVGMPCVVLRS 331
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433515|ref|XP_004134543.1| PREDICTED: uncharacterized protein LOC101206737 [Cucumis sativus] gi|449506776|ref|XP_004162845.1| PREDICTED: uncharacterized protein LOC101226823 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/298 (58%), Positives = 225/298 (75%), Gaps = 25/298 (8%)
Query: 49 STFPRNYNFH-GKCLHVNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAF 107
S F R+YNF L + +AFSSSS ++ +P ++LAVLLEV+GVLVDAYR NRQAF
Sbjct: 44 SVFSRSYNFIVDSSLRIRRLTAFSSSSSSNNDSP-QELAVLLEVEGVLVDAYRSTNRQAF 102
Query: 108 NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-------------------- 147
N AF+KLGLDCANWT P+Y+DL+RK+A +E+RML+++FNR
Sbjct: 103 NEAFRKLGLDCANWTEPVYSDLVRKNAANEERMLIMYFNRIGWPTSLPTNEKESFIKSVL 162
Query: 148 ---KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204
K A DE + S+ PLRPGVEDF+D+A+NEGIP+I+LTAY KSG+ IARS++ KLG E
Sbjct: 163 REKKKASDELMVSQSLPLRPGVEDFIDNAHNEGIPVIILTAYSKSGEEIARSIINKLGPE 222
Query: 205 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL 264
RISK+KIVGNEE+ +SLY +FV G+ SG++E+LA EA KA SA+KQ IA++VAS LKL
Sbjct: 223 RISKVKIVGNEEMRQSLYSEFVSGQAKQSGLEEELAKEAMKAASAEKQRIAKKVASALKL 282
Query: 265 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
SV+I+T+S ESLDKI+ ALRAG+E A PV NC L+AG+QSG+ GA+RIGMP +V+RS
Sbjct: 283 SVEINTTSSESLDKIICALRAGSELAGTPVSNCILVAGTQSGIDGAERIGMPRIVIRS 340
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|414869086|tpg|DAA47643.1| TPA: hypothetical protein ZEAMMB73_048619 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/280 (60%), Positives = 204/280 (72%), Gaps = 25/280 (8%)
Query: 66 PFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI 125
P F SS + PRDL +LLEV+GVL D YRFGNRQAFNVAF+ LGLDCANWT PI
Sbjct: 107 PAPPFRCSSSSPENSAPRDLGLLLEVEGVLADVYRFGNRQAFNVAFRSLGLDCANWTEPI 166
Query: 126 YTDLLRKSAGDEDRMLVLFFNR-----------------------KNALDEFLASKDAPL 162
Y DL+RK+ GDE+RML LFF+R AL+EF AS PL
Sbjct: 167 YADLVRKACGDEERMLALFFDRIGWPTSLPTSEKGSFIKSVLREKLKALEEFSASDSLPL 226
Query: 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222
RPGVE F+DDA EG+PL +L AYG++G++I+RS+ KLG ERISKIKIVGN EVE S Y
Sbjct: 227 RPGVEKFIDDALGEGVPLAILAAYGRNGEKISRSIAMKLGPERISKIKIVGNVEVEESFY 286
Query: 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 282
GQ VLGKG++SG+DEQL EA+KA SA+KQ IAE+VAS+LKLSVDI S ES DK++AA
Sbjct: 287 GQLVLGKGVTSGLDEQLVREAQKAASAEKQRIAEKVASILKLSVDITAS--ESSDKVIAA 344
Query: 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
LRAG+EY V++C L+AGSQSGV A+RIGMPC+V+RS
Sbjct: 345 LRAGSEYVGCDVQSCILVAGSQSGVLAAERIGMPCIVVRS 384
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | ||||||
| TAIR|locus:2153348 | 372 | AT5G45170 "AT5G45170" [Arabido | 0.544 | 0.473 | 0.636 | 8.3e-83 | |
| TAIR|locus:2101165 | 319 | AT3G48420 [Arabidopsis thalian | 0.182 | 0.184 | 0.387 | 1.4e-05 |
| TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 588 (212.0 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 112/176 (63%), Positives = 143/176 (81%)
Query: 147 RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206
+KNA+DEFL SK PLR GV++F+D+AY E +P+ ++TAY KSGD++A S+VE LG ER+
Sbjct: 163 KKNAMDEFLISKSLPLRSGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQERL 222
Query: 207 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSV 266
+K++G+ EVE+S+YGQ VLGKG+SS ++EQL E +KA SA+KQ IAEEVASMLKLSV
Sbjct: 223 PNVKVIGDNEVEQSMYGQLVLGKGVSSSLEEQLVKEVKKAASAEKQRIAEEVASMLKLSV 282
Query: 267 DIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322
DIDT+S E L+KIV ALRA AE+ PV NC L+AGSQ GV+ A+ IGMPCVVMRS
Sbjct: 283 DIDTTSSERLEKIVVALRAAAEHIGLPVNNCVLVAGSQPGVSAAKMIGMPCVVMRS 338
|
|
| TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 102 (41.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLVD + G+R +FN F++ L+ W +Y +LL K G ++RM +F
Sbjct: 78 ALLFDCDGVLVDTEKDGHRISFNDTFKERDLN-VTWDVDLYGELL-KIGGGKERMTA-YF 134
Query: 146 NR 147
N+
Sbjct: 135 NK 136
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| eugene3.00150918 | hypothetical protein (380 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.XIII.601.1 | SubName- Full=Putative uncharacterized protein; (1016 aa) | • | • | 0.508 | |||||||
| gw1.XIX.851.1 | hypothetical protein (317 aa) | • | • | 0.427 | |||||||
| fgenesh4_pm.C_LG_X000153 | hypothetical protein (221 aa) | • | • | 0.403 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 323 | |||
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 1e-12 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 1e-07 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 8e-06 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 0.001 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 1e-12
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A+L + DGVLV+ R G+R AFN AF++ GL W +Y D L G ++RM +F
Sbjct: 42 ALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELY-DELLNIGGGKERM-TWYF 99
Query: 146 N------------------RKNALD-----------EFLASKDAPLRPGVEDFVDDAYNE 176
N RK +D E + S PLRPGV +D+A
Sbjct: 100 NENGWPTSTIEKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAA 159
Query: 177 GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219
GI + V + + + + LG ER + + ++V +
Sbjct: 160 GIKVAVCSTSNEKAVSKIVNTL--LGPERAQGLDVFAGDDVPK 200
|
Length = 286 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 1e-07
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 21/129 (16%)
Query: 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW---------TAPIYTDLLRKSAGDE 137
++ ++DG L+D ++A ++LGLD + DLLR+ D
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60
Query: 138 DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDR-IARS 196
D +L E+ P V + + +G+ L++L+ +G R
Sbjct: 61 DEILEAL-------LEYNLESRLEPFPDVVELLRRLKAKGVKLVILS----NGSREAVER 109
Query: 197 VVEKLGSER 205
++EKLG
Sbjct: 110 LLEKLGLLD 118
|
Length = 176 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 8e-06
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW---------TAPIYTDLLRKSAGD 136
A+L ++DG LVD+ +AFN A +LGL + + L A +
Sbjct: 6 AILFDLDGTLVDSAE-DILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADE 64
Query: 137 EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARS 196
E ++ R+ L + ++ L PGV++ + + G L ++T +
Sbjct: 65 EAAAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERE---LDI 121
Query: 197 VVEKLG 202
+++ LG
Sbjct: 122 LLKALG 127
|
Length = 220 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.001
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA-NWTAPIY-------TDLLRKSAGDE 137
AV+ ++DG LVD+ + +A+ A ++ G++ + ++ DLLRK A E
Sbjct: 4 AVIFDMDGTLVDSEPL-HARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGE 62
Query: 138 DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSV 197
D + R E L + PGV + ++ GIPL V ++ S R A V
Sbjct: 63 DPADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERV 119
Query: 198 VEKLGSERISKIKIVGNEEVERS 220
+ +LG IV ++V R
Sbjct: 120 LARLGLLDYFD-VIVTADDVARG 141
|
Length = 221 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.96 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.95 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.95 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.95 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.95 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.95 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.95 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.95 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.94 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.94 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.94 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.94 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.94 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.94 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.93 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.93 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.93 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.93 | |
| PLN02940 | 382 | riboflavin kinase | 99.93 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.92 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.92 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.92 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.92 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.92 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.92 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.91 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.91 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.9 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.9 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.9 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.9 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.88 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.88 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.88 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.88 | |
| PLN02811 | 220 | hydrolase | 99.87 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.87 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.87 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.86 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.86 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.85 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.82 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.82 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.81 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.8 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.78 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.77 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.77 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.77 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.76 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.76 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.76 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.76 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.76 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.75 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.71 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.71 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.69 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.67 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.66 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.64 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.62 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.6 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.6 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.59 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.59 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.59 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.59 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.59 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.57 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.57 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.56 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.56 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.55 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.55 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.51 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.49 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.48 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.48 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.48 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.38 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.36 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.34 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.33 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.33 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.31 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.3 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.3 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.25 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.24 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.18 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.17 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.16 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.1 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.1 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.09 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.07 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.07 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.02 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.02 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.97 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 98.96 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.93 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.92 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.9 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.84 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.82 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.77 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 98.77 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.76 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.75 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.75 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.75 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.66 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.64 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.64 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.64 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.62 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.58 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.55 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.55 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.49 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.48 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.45 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.39 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.39 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.39 | |
| PLN02887 | 580 | hydrolase family protein | 98.38 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.37 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.33 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.33 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.32 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.32 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.31 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.27 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.25 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.15 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.11 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.09 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.0 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.96 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.84 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.83 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.71 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.69 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.66 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.63 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.59 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.55 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.54 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.53 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.5 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.49 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.47 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.45 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 97.4 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.4 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.35 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.29 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.25 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.23 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.2 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.16 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.07 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.04 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 96.98 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 96.97 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 96.94 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.86 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.73 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.73 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.69 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.61 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.51 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 96.5 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 96.46 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 96.4 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 96.28 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.28 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.2 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.17 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.11 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.11 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 96.04 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.78 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 95.66 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 95.62 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 95.59 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 95.32 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 95.22 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.11 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 94.56 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 94.5 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 94.49 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 94.43 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 94.4 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 94.3 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 93.83 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 93.7 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.68 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 93.67 | |
| PLN02423 | 245 | phosphomannomutase | 93.19 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 93.16 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 92.39 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 92.15 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 91.96 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 91.13 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 90.93 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 90.82 | |
| PLN02580 | 384 | trehalose-phosphatase | 90.48 | |
| PLN03017 | 366 | trehalose-phosphatase | 90.45 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 89.78 | |
| PLN02151 | 354 | trehalose-phosphatase | 89.66 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 89.04 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 88.42 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 87.93 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 87.82 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 87.59 | |
| PLN02423 | 245 | phosphomannomutase | 86.86 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 85.86 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 85.73 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 84.8 | |
| PF06506 | 176 | PrpR_N: Propionate catabolism activator; InterPro: | 84.68 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 84.55 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 84.41 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 84.18 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 83.35 | |
| TIGR02329 | 526 | propionate_PrpR propionate catabolism operon regul | 81.09 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 80.95 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 80.53 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 80.02 |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=219.35 Aligned_cols=176 Identities=24% Similarity=0.321 Sum_probs=137.9
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh---------HHH-HH-
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN---------RKN-AL- 151 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~- 151 (323)
.+|+|||||||||+||+.. +.++|.++++++|+. .+.+.+....+............... ... .+
T Consensus 1 ~~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIE---ISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYE 76 (221)
T ss_pred CCcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCC---CCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHH
Confidence 3689999999999999997 999999999999997 35555555544332222221111110 011 11
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
.........+++||+.++|+.|+++|+++++.|+ +....+...++.+|+.++|+.+ ++++++.+
T Consensus 77 ~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~---s~~~~~~~~L~~~gl~~~f~~~-v~~~dv~~------------ 140 (221)
T COG0637 77 AEALELEGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDYFDVI-VTADDVAR------------ 140 (221)
T ss_pred HHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecC---ChHHHHHHHHHHccChhhcchh-ccHHHHhc------------
Confidence 1112234688999999999999999999999999 5678899999999999999985 55555544
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
.||+|++ |..+++++|++|++||.|+|+.++|++|+
T Consensus 141 ------------------------------~KP~Pd~--------------yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~ 176 (221)
T COG0637 141 ------------------------------GKPAPDI--------------YLLAAERLGVDPEECVVVEDSPAGIQAAK 176 (221)
T ss_pred ------------------------------CCCCCHH--------------HHHHHHHcCCChHHeEEEecchhHHHHHH
Confidence 2999999 99999999999999999999999999999
Q ss_pred HcCCCEEEEcC
Q 020675 312 RIGMPCVVMRS 322 (323)
Q Consensus 312 ~aG~~~v~v~~ 322 (323)
+|||.+|+|.+
T Consensus 177 aAGm~vv~v~~ 187 (221)
T COG0637 177 AAGMRVVGVPA 187 (221)
T ss_pred HCCCEEEEecC
Confidence 99999999975
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-28 Score=218.91 Aligned_cols=180 Identities=19% Similarity=0.243 Sum_probs=136.7
Q ss_pred CCCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCC-CCCCHHHH-HHHHcccCCcHHHHHHHH-----------H
Q 020675 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC-ANWTAPIY-TDLLRKSAGDEDRMLVLF-----------F 145 (323)
Q Consensus 79 ~~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~ 145 (323)
....++|+|||||||||+|+... +..+|+++++++|... ..++.+.+ ..+.+.. ....+... .
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~---~~~~~~~~~~~~~~~~~~~~ 92 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVENIAGKH---NEDIALGLFPDDLERGLKFT 92 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHHcCCCC---HHHHHHHHcCcchhhHHHHH
Confidence 34456899999999999999986 8999999999997531 12334332 2223321 11111111 0
Q ss_pred h-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcc
Q 020675 146 N-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (323)
Q Consensus 146 ~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~ 224 (323)
. ....|.+.. .....++||+.++|+.|+++|++++|+|| +....++..++++|+.++|+.+ ++++++..
T Consensus 93 ~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~i-v~~~~~~~----- 162 (248)
T PLN02770 93 DDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTN---APRENAELMISLLGLSDFFQAV-IIGSECEH----- 162 (248)
T ss_pred HHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCChhhCcEE-EecCcCCC-----
Confidence 0 122333322 23477999999999999999999999999 5679999999999999999975 45544432
Q ss_pred cccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh
Q 020675 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 304 (323)
Q Consensus 225 ~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~ 304 (323)
.||+|++ |..+++++|++|++|++|||+.
T Consensus 163 -------------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~l~vgDs~ 191 (248)
T PLN02770 163 -------------------------------------AKPHPDP--------------YLKALEVLKVSKDHTFVFEDSV 191 (248)
T ss_pred -------------------------------------CCCChHH--------------HHHHHHHhCCChhHEEEEcCCH
Confidence 3999999 9999999999999999999999
Q ss_pred hhHHHHHHcCCCEEEEcCC
Q 020675 305 SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 305 ~Di~aA~~aG~~~v~v~~g 323 (323)
.|+++|+++||.+|+|.+|
T Consensus 192 ~Di~aA~~aGi~~i~v~~g 210 (248)
T PLN02770 192 SGIKAGVAAGMPVVGLTTR 210 (248)
T ss_pred HHHHHHHHCCCEEEEEeCC
Confidence 9999999999999999764
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=212.04 Aligned_cols=179 Identities=11% Similarity=0.098 Sum_probs=136.1
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHH-HHH-hHHHHHHHHH---h
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV-LFF-NRKNALDEFL---A 156 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~i---~ 156 (323)
|.+|+|+||+||||+|+... +..+|++++++++... .+.+.+....+........... ... .....+.+.. .
T Consensus 1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPNQ--YKREDVLPFIGPSLHDTFSKIDESKVEEMITTYREFNHEHH 77 (214)
T ss_pred CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 56899999999999999986 8999999999988652 3455555555533111110000 000 0011122211 1
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcc
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
....+++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ ++.++...
T Consensus 78 ~~~~~~~~g~~~~l~~L~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~f~~i-~~~~~~~~----------------- 136 (214)
T PRK13288 78 DELVTEYETVYETLKTLKKQGYKLGIVTT---KMRDTVEMGLKLTGLDEFFDVV-ITLDDVEH----------------- 136 (214)
T ss_pred hhhcccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhceeEE-EecCcCCC-----------------
Confidence 23467999999999999999999999999 5678899999999999999975 45444322
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
.||+|++ |+.+++++|++|+++++|||+.+|+++|+++|+.
T Consensus 137 -------------------------~Kp~p~~--------------~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 137 -------------------------AKPDPEP--------------VLKALELLGAKPEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred -------------------------CCCCcHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 3999999 9999999999999999999999999999999999
Q ss_pred EEEEcCC
Q 020675 317 CVVMRSR 323 (323)
Q Consensus 317 ~v~v~~g 323 (323)
+|+|.+|
T Consensus 178 ~i~v~~g 184 (214)
T PRK13288 178 TAGVAWT 184 (214)
T ss_pred EEEEcCC
Confidence 9999875
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=215.54 Aligned_cols=176 Identities=17% Similarity=0.126 Sum_probs=131.1
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH-----------------------HHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-----------------------DRM 140 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~ 140 (323)
+|+||||+||||+|+....+..+++++++++|.+ ++.+.+...++...... ...
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQ---ITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEAD 78 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCC---ccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHH
Confidence 6899999999999986532578999999999986 34444433333221000 000
Q ss_pred HHHHHh-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc-cceeechhhhh
Q 020675 141 LVLFFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEEVE 218 (323)
Q Consensus 141 ~~~~~~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f-d~~v~s~~~~~ 218 (323)
....+. ..+.+.+.+ .....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+| +. +++++++.
T Consensus 79 ~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~---~~~~~~~~~l~~~gl~~~f~d~-ii~~~~~~ 153 (253)
T TIGR01422 79 IEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTG---YTREMMDVVAPEAALQGYRPDY-NVTTDDVP 153 (253)
T ss_pred HHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHHHHhcCCCCce-EEccccCC
Confidence 000000 011112222 23477999999999999999999999999 5678899999999999986 65 46665543
Q ss_pred hhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcE
Q 020675 219 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNC 297 (323)
Q Consensus 219 ~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~ 297 (323)
. .||+|++ |..+++++|+. |++|
T Consensus 154 ~------------------------------------------~KP~p~~--------------~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 154 A------------------------------------------GRPAPWM--------------ALKNAIELGVYDVAAC 177 (253)
T ss_pred C------------------------------------------CCCCHHH--------------HHHHHHHcCCCCchhe
Confidence 3 3999999 99999999995 9999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 298 FLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 298 v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++|||+.+|+++|+++||.+|+|.+|
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEEecC
Confidence 99999999999999999999999875
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=216.57 Aligned_cols=179 Identities=23% Similarity=0.252 Sum_probs=134.6
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHH----------HHHHhHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML----------VLFFNRKNA 150 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 150 (323)
...+|+|||||||||+|+....+..+|+++++++|++. ...+.+..+.+.......+.. .........
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~--~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 98 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRP--PPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKED 98 (260)
T ss_pred cCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 45688999999999999964226789999999999873 223344445454322111111 000111111
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+..........++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+.+ ++++++..
T Consensus 99 ~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~i-i~~~d~~~----------- 163 (260)
T PLN03243 99 LYEYMQGGLYRLRPGSREFVQALKKHEIPIAVAST---RPRRYLERAIEAVGMEGFFSVV-LAAEDVYR----------- 163 (260)
T ss_pred HHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeC---cCHHHHHHHHHHcCCHhhCcEE-EecccCCC-----------
Confidence 11222234577999999999999999999999999 5678899999999999999985 44444432
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
.||+|++ |..+++++|++|++|+||||+..|+++|
T Consensus 164 -------------------------------~KP~Pe~--------------~~~a~~~l~~~p~~~l~IgDs~~Di~aA 198 (260)
T PLN03243 164 -------------------------------GKPDPEM--------------FMYAAERLGFIPERCIVFGNSNSSVEAA 198 (260)
T ss_pred -------------------------------CCCCHHH--------------HHHHHHHhCCChHHeEEEcCCHHHHHHH
Confidence 3999999 9999999999999999999999999999
Q ss_pred HHcCCCEEEEc
Q 020675 311 QRIGMPCVVMR 321 (323)
Q Consensus 311 ~~aG~~~v~v~ 321 (323)
+++||.+|+|.
T Consensus 199 ~~aG~~~i~v~ 209 (260)
T PLN03243 199 HDGCMKCVAVA 209 (260)
T ss_pred HHcCCEEEEEe
Confidence 99999999986
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=212.59 Aligned_cols=176 Identities=19% Similarity=0.218 Sum_probs=134.4
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHH---------HHHHHh-HHHHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRM---------LVLFFN-RKNALDE 153 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~ 153 (323)
+|+||||+||||+|+... +..+++.+++++|.+. ++.+.+....+......... ...... ..+.|.+
T Consensus 12 ~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (229)
T PRK13226 12 PRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRAP--ITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEA 88 (229)
T ss_pred CCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 479999999999999996 9999999999999873 56655554444221110000 000000 0222322
Q ss_pred HHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccccc
Q 020675 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 154 ~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
.+. ...+++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 89 ~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~--------------- 148 (229)
T PRK13226 89 LIG-TQSQLFDGVEGMLQRLECAGCVWGIVTN---KPEYLARLILPQLGWEQRCAVL-IGGDTLA--------------- 148 (229)
T ss_pred hhh-hcCeeCCCHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCchhcccEE-EecCcCC---------------
Confidence 222 2467999999999999999999999999 5567888899999999999864 4544332
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
..||+|++ |..+++++|++|++|+||||+.+|+++|+++
T Consensus 149 ---------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~a 187 (229)
T PRK13226 149 ---------------------------ERKPHPLP--------------LLVAAERIGVAPTDCVYVGDDERDILAARAA 187 (229)
T ss_pred ---------------------------CCCCCHHH--------------HHHHHHHhCCChhhEEEeCCCHHHHHHHHHC
Confidence 23999999 9999999999999999999999999999999
Q ss_pred CCCEEEEcCC
Q 020675 314 GMPCVVMRSR 323 (323)
Q Consensus 314 G~~~v~v~~g 323 (323)
||.+|+|.+|
T Consensus 188 G~~~i~v~~g 197 (229)
T PRK13226 188 GMPSVAALWG 197 (229)
T ss_pred CCcEEEEeec
Confidence 9999999775
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-27 Score=209.94 Aligned_cols=172 Identities=20% Similarity=0.286 Sum_probs=127.2
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH------------HhHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF------------FNRKN 149 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 149 (323)
|.+|+|||||||||+|+... +..+++++++++|++. .+....+.+.. ....+..+ +....
T Consensus 1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~----~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP----DEVLNFIHGKQ---AITSLRHFMAGASEAEIQAEFTRLE 72 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH----HHHHHHHcCCC---HHHHHHHHhccCCcHHHHHHHHHHH
Confidence 57899999999999999986 8999999999999862 22222222221 11111111 10001
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
.+... ......++||+.++|+.|+++|++++|+||. ........++.+++. +|+. +++.+++..
T Consensus 73 ~~~~~-~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~---~~~~~~~~l~~~~l~-~~~~-i~~~~~~~~---------- 136 (218)
T PRK11587 73 QIEAT-DTEGITALPGAIALLNHLNKLGIPWAIVTSG---SVPVASARHKAAGLP-APEV-FVTAERVKR---------- 136 (218)
T ss_pred HHHHh-hhcCceeCcCHHHHHHHHHHcCCcEEEEcCC---CchHHHHHHHhcCCC-CccE-EEEHHHhcC----------
Confidence 11111 1235779999999999999999999999994 456667778888884 4654 455544422
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
.||+|++ |..+++++|+.|++|+||||+..|+++
T Consensus 137 --------------------------------~KP~p~~--------------~~~~~~~~g~~p~~~l~igDs~~di~a 170 (218)
T PRK11587 137 --------------------------------GKPEPDA--------------YLLGAQLLGLAPQECVVVEDAPAGVLS 170 (218)
T ss_pred --------------------------------CCCCcHH--------------HHHHHHHcCCCcccEEEEecchhhhHH
Confidence 3999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEEcCC
Q 020675 310 AQRIGMPCVVMRSR 323 (323)
Q Consensus 310 A~~aG~~~v~v~~g 323 (323)
|+++||.+|+|.++
T Consensus 171 A~~aG~~~i~v~~~ 184 (218)
T PRK11587 171 GLAAGCHVIAVNAP 184 (218)
T ss_pred HHHCCCEEEEECCC
Confidence 99999999999763
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=206.93 Aligned_cols=179 Identities=21% Similarity=0.246 Sum_probs=138.0
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHH---------HHHh-HHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV---------LFFN-RKNAL 151 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~ 151 (323)
|.+++|+||+||||+|+... +..+++.+++++|.+. ...+....+.+........... .... ..+.|
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP--LDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEF 78 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 56889999999999999996 8999999999999983 4555555555443211111000 0110 11223
Q ss_pred HHHHhcC-CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 152 DEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 152 ~~~i~~~-~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
.+..... ...++||+.++|+.|+++|++++|+|| .+...++..++.+|+..+|+.+ ++.++...
T Consensus 79 ~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~---k~~~~~~~~l~~~gl~~~F~~i-~g~~~~~~----------- 143 (220)
T COG0546 79 LTAYAELLESRLFPGVKELLAALKSAGYKLGIVTN---KPERELDILLKALGLADYFDVI-VGGDDVPP----------- 143 (220)
T ss_pred HHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHhCCccccceE-EcCCCCCC-----------
Confidence 2222222 256999999999999999999999999 6789999999999999999985 44333322
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
.||+|.. +..+++++|++|++++||||+.+|+++|
T Consensus 144 -------------------------------~KP~P~~--------------l~~~~~~~~~~~~~~l~VGDs~~Di~aA 178 (220)
T COG0546 144 -------------------------------PKPDPEP--------------LLLLLEKLGLDPEEALMVGDSLNDILAA 178 (220)
T ss_pred -------------------------------CCcCHHH--------------HHHHHHHhCCChhheEEECCCHHHHHHH
Confidence 3999999 8999999999988999999999999999
Q ss_pred HHcCCCEEEEcCC
Q 020675 311 QRIGMPCVVMRSR 323 (323)
Q Consensus 311 ~~aG~~~v~v~~g 323 (323)
++||+.+|+|.||
T Consensus 179 ~~Ag~~~v~v~~g 191 (220)
T COG0546 179 KAAGVPAVGVTWG 191 (220)
T ss_pred HHcCCCEEEEECC
Confidence 9999999999986
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=205.22 Aligned_cols=176 Identities=19% Similarity=0.182 Sum_probs=132.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHH-HHcccCCcHHHHH-----------HHHHh-HHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTD-LLRKSAGDEDRML-----------VLFFN-RKNA 150 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~-~~~~ 150 (323)
+|+||||+||||+|+... +..+++++++++|.+. +...+.. +.+.......+.. ..... ..+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLSP---TPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEER 76 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCCC---CHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 479999999999999996 9999999999999873 3333322 3332211111100 00000 0122
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC--ccccceeechhhhhhhhhcccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~--~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
+.+.+.....+++||+.++|+.|+++|++++|+|| +....+..+++.+|+. .+|+.+ +++++...
T Consensus 77 ~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~---~~~~~~~~~l~~~~l~~~~~f~~i-~~~~~~~~--------- 143 (220)
T TIGR03351 77 LAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTG---FDRDTAERLLEKLGWTVGDDVDAV-VCPSDVAA--------- 143 (220)
T ss_pred HHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHHhhhhhhccCCEE-EcCCcCCC---------
Confidence 22222233467999999999999999999999999 6678899999999998 999974 55444322
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCChhhH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGV 307 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~v~VGDs~~Di 307 (323)
.||+|++ |..+++++|+. |++|+||||+..|+
T Consensus 144 ---------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~~~~igD~~~Di 176 (220)
T TIGR03351 144 ---------------------------------GRPAPDL--------------ILRAMELTGVQDVQSVAVAGDTPNDL 176 (220)
T ss_pred ---------------------------------CCCCHHH--------------HHHHHHHcCCCChhHeEEeCCCHHHH
Confidence 3999999 99999999997 79999999999999
Q ss_pred HHHHHcCCCE-EEEcCC
Q 020675 308 AGAQRIGMPC-VVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~-v~v~~g 323 (323)
++|+++||.+ |++.+|
T Consensus 177 ~aa~~aG~~~~i~~~~g 193 (220)
T TIGR03351 177 EAGINAGAGAVVGVLTG 193 (220)
T ss_pred HHHHHCCCCeEEEEecC
Confidence 9999999999 888764
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=211.06 Aligned_cols=178 Identities=19% Similarity=0.133 Sum_probs=129.9
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH-----------------------
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED----------------------- 138 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------------------- 138 (323)
|++|+||||+||||+|+....+..+|+++++++|.+. +.+.+...++.......
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 78 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEI---TLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTE 78 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCC---CHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCH
Confidence 4579999999999999865324689999999999863 34433333332110000
Q ss_pred HHHHHHHh-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc-cceeechhh
Q 020675 139 RMLVLFFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEE 216 (323)
Q Consensus 139 ~~~~~~~~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f-d~~v~s~~~ 216 (323)
........ ....+.+.+ .....++||+.++|+.|+++|++++|+|| +....+..+++.+++..+| +. ++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~---~~~~~~~~~l~~~~l~~~~~d~-i~~~~~ 153 (267)
T PRK13478 79 ADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTG---YTREMMDVVVPLAAAQGYRPDH-VVTTDD 153 (267)
T ss_pred HHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHHhhcCCCceE-EEcCCc
Confidence 00000000 011222222 23467999999999999999999999999 5678888999999998875 54 455554
Q ss_pred hhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CC
Q 020675 217 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VR 295 (323)
Q Consensus 217 ~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~ 295 (323)
+.. .||+|++ |..+++++|+. |+
T Consensus 154 ~~~------------------------------------------~KP~p~~--------------~~~a~~~l~~~~~~ 177 (267)
T PRK13478 154 VPA------------------------------------------GRPYPWM--------------ALKNAIELGVYDVA 177 (267)
T ss_pred CCC------------------------------------------CCCChHH--------------HHHHHHHcCCCCCc
Confidence 432 3999999 99999999996 69
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 296 NCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 296 ~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
+|+||||+.+|+++|+++||.+|+|.+|
T Consensus 178 e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 178 ACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred ceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 9999999999999999999999999875
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=205.56 Aligned_cols=178 Identities=17% Similarity=0.204 Sum_probs=133.4
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHH-----------HHHh-HH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV-----------LFFN-RK 148 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~~ 148 (323)
.+.+|+|+||+||||+|+... +..++.++++++|++. ..++.+...++.......+.+. .... ..
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI--SRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRII 80 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCCC--CHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 345899999999999999986 8999999999999863 2223333333321111000000 0000 01
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccc
Q 020675 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 149 ~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
+.+.+.+. ....++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.+ ++++++.
T Consensus 81 ~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~---------- 145 (222)
T PRK10826 81 ARVISLIE-ETRPLLPGVREALALCKAQGLKIGLASA---SPLHMLEAVLTMFDLRDYFDAL-ASAEKLP---------- 145 (222)
T ss_pred HHHHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHhCcchhcccEE-EEcccCC----------
Confidence 22222222 3467999999999999999999999999 5678899999999999999975 4444432
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
..||+|++ |+.+++++|++|++|++|||+.+|++
T Consensus 146 --------------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~igDs~~Di~ 179 (222)
T PRK10826 146 --------------------------------YSKPHPEV--------------YLNCAAKLGVDPLTCVALEDSFNGMI 179 (222)
T ss_pred --------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCChhhHH
Confidence 23999999 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcC
Q 020675 309 GAQRIGMPCVVMRS 322 (323)
Q Consensus 309 aA~~aG~~~v~v~~ 322 (323)
+|+++||++|++.+
T Consensus 180 aA~~aG~~~i~v~~ 193 (222)
T PRK10826 180 AAKAARMRSIVVPA 193 (222)
T ss_pred HHHHcCCEEEEecC
Confidence 99999999999975
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=202.64 Aligned_cols=173 Identities=23% Similarity=0.285 Sum_probs=131.5
Q ss_pred EEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH-HHH------------HHHHhH-HHHHH
Q 020675 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED-RML------------VLFFNR-KNALD 152 (323)
Q Consensus 87 ViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~------------~~~~~~-~~~~~ 152 (323)
||||+||||+|+... +..+++++++++|.+. ++.+.+...++....... .+. ...... .+.|.
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLPP--ATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYE 77 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHH
Confidence 689999999999885 8899999999999863 455555544433211000 000 000100 12222
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 153 ~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
+.. .....++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+.+ +++++...
T Consensus 78 ~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~~------------- 139 (213)
T TIGR01449 78 EVA-GELTSVFPGVEATLGALRAKGLRLGLVTN---KPTPLARPLLELLGLAKYFSVL-IGGDSLAQ------------- 139 (213)
T ss_pred Hhc-cccCccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCcHhhCcEE-EecCCCCC-------------
Confidence 221 22467999999999999999999999999 5678899999999999999874 55544322
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
.||+|++ |..+++++|++|++|++|||+.+|+++|++
T Consensus 140 -----------------------------~Kp~p~~--------------~~~~~~~~~~~~~~~~~igDs~~d~~aa~~ 176 (213)
T TIGR01449 140 -----------------------------RKPHPDP--------------LLLAAERLGVAPQQMVYVGDSRVDIQAARA 176 (213)
T ss_pred -----------------------------CCCChHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence 3999999 999999999999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+||.+|+|.+|
T Consensus 177 aG~~~i~v~~g 187 (213)
T TIGR01449 177 AGCPSVLLTYG 187 (213)
T ss_pred CCCeEEEEccC
Confidence 99999999764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=217.68 Aligned_cols=178 Identities=19% Similarity=0.225 Sum_probs=135.6
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHH----------HHHHhH-HHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML----------VLFFNR-KNAL 151 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~ 151 (323)
..++|||||||||+|+....+..+|.++++++|++. ...+.+..+.+.......... ...... .+.|
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~--~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y 207 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSP--PPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIY 207 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence 678999999999999886326679999999999873 334344455553322111110 000000 2222
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
.+.. .....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..||+.+ ++++++..
T Consensus 208 ~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~yFd~I-v~sddv~~------------ 270 (381)
T PLN02575 208 QALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVST---RPRKTLENAIGSIGIRGFFSVI-VAAEDVYR------------ 270 (381)
T ss_pred HHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHHceEE-EecCcCCC------------
Confidence 2222 23467999999999999999999999999 5679999999999999999985 55554432
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
.||+|++ |..+++++|+.|++|+||||+..|+++|+
T Consensus 271 ------------------------------~KP~Pei--------------fl~A~~~lgl~Peecl~IGDS~~DIeAAk 306 (381)
T PLN02575 271 ------------------------------GKPDPEM--------------FIYAAQLLNFIPERCIVFGNSNQTVEAAH 306 (381)
T ss_pred ------------------------------CCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHHHHHH
Confidence 3999999 99999999999999999999999999999
Q ss_pred HcCCCEEEEcCC
Q 020675 312 RIGMPCVVMRSR 323 (323)
Q Consensus 312 ~aG~~~v~v~~g 323 (323)
++||.+|+|.++
T Consensus 307 ~AGm~~IgV~~~ 318 (381)
T PLN02575 307 DARMKCVAVASK 318 (381)
T ss_pred HcCCEEEEECCC
Confidence 999999999763
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=195.42 Aligned_cols=171 Identities=26% Similarity=0.350 Sum_probs=127.6
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHH-HHH------------HHHh-HHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-MLV------------LFFN-RKN 149 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------~~~~-~~~ 149 (323)
+|+|+||+||||+|+... +..++..+++++|.+ ++.+....+.+........ ... .... ..+
T Consensus 1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIE---FDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNE 76 (185)
T ss_pred CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCC---CCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 479999999999999986 889999999999986 3333332232221111100 000 0000 122
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
.+.+.+......++||+.++|+.|+++|++++++|| + ..++.+++.+|+..+|+.+ +++++..
T Consensus 77 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~---~--~~~~~~l~~~~l~~~f~~v-~~~~~~~----------- 139 (185)
T TIGR02009 77 LYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSS---S--KNADRILAKLGLTDYFDAI-VDADEVK----------- 139 (185)
T ss_pred HHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeC---c--hhHHHHHHHcChHHHCCEe-eehhhCC-----------
Confidence 333333234478999999999999999999999999 4 5678899999999999975 4444332
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
..||+|++ |+.+++++|++|+++++|||+..|+++
T Consensus 140 -------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~v~IgD~~~di~a 174 (185)
T TIGR02009 140 -------------------------------EGKPHPET--------------FLLAAELLGVSPNECVVFEDALAGVQA 174 (185)
T ss_pred -------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEeCcHhhHHH
Confidence 23999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEE
Q 020675 310 AQRIGMPCVVM 320 (323)
Q Consensus 310 A~~aG~~~v~v 320 (323)
|+++||++|.|
T Consensus 175 A~~~G~~~i~v 185 (185)
T TIGR02009 175 ARAAGMFAVAV 185 (185)
T ss_pred HHHCCCeEeeC
Confidence 99999999976
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-26 Score=196.62 Aligned_cols=170 Identities=24% Similarity=0.337 Sum_probs=125.5
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHH-------------HHHHh-HHHHH
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML-------------VLFFN-RKNAL 151 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~~~~ 151 (323)
+||||+||||+|+... +..+++++++++|++ ++.+....+.+.......+.. ..... ..+.|
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIP---FDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYY 76 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 5899999999999996 899999999999987 344443333332211111100 00000 11223
Q ss_pred HHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 152 DEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 152 ~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
.+.+.. ....++||+.++|+.|+++|++++|+||+ . .....++.+|+..+|+.+ +++++...
T Consensus 77 ~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~---~--~~~~~l~~~~l~~~f~~~-~~~~~~~~----------- 139 (185)
T TIGR01990 77 VELLKELTPADVLPGIKNLLDDLKKNNIKIALASAS---K--NAPTVLEKLGLIDYFDAI-VDPAEIKK----------- 139 (185)
T ss_pred HHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCC---c--cHHHHHHhcCcHhhCcEE-EehhhcCC-----------
Confidence 333221 23478999999999999999999999983 2 245789999999999975 44444322
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
.||+|++ |+.++++++++|++|++|||+.+|+++|
T Consensus 140 -------------------------------~kp~p~~--------------~~~~~~~~~~~~~~~v~vgD~~~di~aA 174 (185)
T TIGR01990 140 -------------------------------GKPDPEI--------------FLAAAEGLGVSPSECIGIEDAQAGIEAI 174 (185)
T ss_pred -------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEecCHHHHHHH
Confidence 3999999 9999999999999999999999999999
Q ss_pred HHcCCCEEEEc
Q 020675 311 QRIGMPCVVMR 321 (323)
Q Consensus 311 ~~aG~~~v~v~ 321 (323)
+++||++|+|.
T Consensus 175 ~~aG~~~i~v~ 185 (185)
T TIGR01990 175 KAAGMFAVGVG 185 (185)
T ss_pred HHcCCEEEecC
Confidence 99999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=200.68 Aligned_cols=174 Identities=24% Similarity=0.356 Sum_probs=130.6
Q ss_pred EEEecCCccccccccchHHHHHHHHHH-cCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHH-HHHHHH-hcCCCCCC
Q 020675 87 VLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKN-ALDEFL-ASKDAPLR 163 (323)
Q Consensus 87 ViFD~DGTLid~~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i-~~~~~~l~ 163 (323)
|||||||||+|+... +.+++++++.+ +|.+. ++.+.+....+.......+.........+ .+.+.. ....++++
T Consensus 1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDGP--APFEEYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYRLAGEVEVF 77 (205)
T ss_pred CeecCcCccccCHHH-HHHHHHHHHHHhcCCCC--CCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHhhcccccC
Confidence 689999999999996 99999999998 47652 45555555554332111110000000000 111111 12357899
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 243 (323)
||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 78 ~g~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~------------------------- 128 (205)
T TIGR01454 78 PGVPELLAELRADGVGTAIATG---KSGPRARSLLEALGLLPLFDHV-IGSDEVP------------------------- 128 (205)
T ss_pred CCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHcCChhheeeE-EecCcCC-------------------------
Confidence 9999999999999999999999 5678889999999999999974 4444332
Q ss_pred HHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 244 ~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||++|++.||
T Consensus 129 -----------------~~KP~~~~--------------~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 129 -----------------RPKPAPDI--------------VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWG 177 (205)
T ss_pred -----------------CCCCChHH--------------HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEec
Confidence 23999999 99999999999999999999999999999999999999875
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=206.20 Aligned_cols=183 Identities=29% Similarity=0.496 Sum_probs=130.7
Q ss_pred CCCceEEEEecCCcccccc-ccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCC-----------------------c
Q 020675 81 PPRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-----------------------D 136 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~-~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------------------~ 136 (323)
...+++|||||||||+|+. .. +..+|+++++++|++...++.+.+..+.....+ .
T Consensus 37 ~~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (286)
T PLN02779 37 SALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKD 115 (286)
T ss_pred ccCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCcc
Confidence 3457899999999999999 86 889999999999984213455443322211100 0
Q ss_pred H---HHHHHHHHh-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc-ee
Q 020675 137 E---DRMLVLFFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KI 211 (323)
Q Consensus 137 ~---~~~~~~~~~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~-~v 211 (323)
. .+....+.. ..+.|.+.+....++++||+.++|+.|+++|++++|+|| +....+..+++.++...+|+. .+
T Consensus 116 ~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn---~~~~~~~~~l~~~~~~~~~~~~~~ 192 (286)
T PLN02779 116 EEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCST---SNEKAVSKIVNTLLGPERAQGLDV 192 (286)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhccccccCceEE
Confidence 0 001111111 123344444334468999999999999999999999999 566788888887754444442 12
Q ss_pred echhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC
Q 020675 212 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 291 (323)
Q Consensus 212 ~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg 291 (323)
++++++. ..||+|++ |..+++++|
T Consensus 193 v~~~~~~------------------------------------------~~KP~p~~--------------~~~a~~~~~ 216 (286)
T PLN02779 193 FAGDDVP------------------------------------------KKKPDPDI--------------YNLAAETLG 216 (286)
T ss_pred EeccccC------------------------------------------CCCCCHHH--------------HHHHHHHhC
Confidence 3433332 23999999 999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 292 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 292 v~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++|++|+||||+.+|+++|+++||.+|+|.+|
T Consensus 217 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 217 VDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred cChHHEEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence 99999999999999999999999999999775
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=201.27 Aligned_cols=176 Identities=16% Similarity=0.222 Sum_probs=130.1
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-------HHHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-------KNALDEF 154 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 154 (323)
|.+|+|+||+||||+|+... +..+|.+++.++|++. ..++.+..+.+.........+...+.. ...+.+.
T Consensus 2 ~~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGITL--SLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAE 78 (221)
T ss_pred CCCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 35889999999999999886 8899999999999863 223334443332211111111111110 1122211
Q ss_pred H---hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 155 L---ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 155 i---~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
+ ......++||+.++|+.| +++++|+|| +....+...++++|+..+|+..+++++++..
T Consensus 79 ~~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn---~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~------------ 140 (221)
T PRK10563 79 VARLFDSELEPIAGANALLESI---TVPMCVVSN---GPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR------------ 140 (221)
T ss_pred HHHHHHccCCcCCCHHHHHHHc---CCCEEEEeC---CcHHHHHHHHHhcChHHhCcceEeeHHhcCC------------
Confidence 1 123477999999999999 499999999 5668899999999999999754566654432
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
.||+|++ |+.+++++|++|++|+||||+..||++|+
T Consensus 141 ------------------------------~KP~p~~--------------~~~a~~~~~~~p~~~l~igDs~~di~aA~ 176 (221)
T PRK10563 141 ------------------------------WKPDPAL--------------MFHAAEAMNVNVENCILVDDSSAGAQSGI 176 (221)
T ss_pred ------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEeCcHhhHHHHH
Confidence 3999999 99999999999999999999999999999
Q ss_pred HcCCCEEEEcC
Q 020675 312 RIGMPCVVMRS 322 (323)
Q Consensus 312 ~aG~~~v~v~~ 322 (323)
++||++|++.+
T Consensus 177 ~aG~~~i~~~~ 187 (221)
T PRK10563 177 AAGMEVFYFCA 187 (221)
T ss_pred HCCCEEEEECC
Confidence 99999998864
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-25 Score=195.17 Aligned_cols=169 Identities=21% Similarity=0.311 Sum_probs=128.2
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh--------------HH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN--------------RK 148 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 148 (323)
++|+||||+||||+|+... +..+|+++++++|.+ ++........+... ......... ..
T Consensus 4 ~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQ---FDEQAMVALNGSPT---WRIAQAIIELNQADLDPHALAREKT 76 (188)
T ss_pred cceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCCH---HHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 4789999999999999986 999999999999986 33333333333221 111111110 01
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccc
Q 020675 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 149 ~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
..+.+.. .....++|+ .++|+.|++. ++++|+|| +....+...++.+|+..+|+.+ +++++...
T Consensus 77 ~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~---~~~~~~~~~l~~~~l~~~fd~i-~~~~~~~~--------- 140 (188)
T PRK10725 77 EAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTG---SESAIAEALLAHLGLRRYFDAV-VAADDVQH--------- 140 (188)
T ss_pred HHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcC---CchHHHHHHHHhCCcHhHceEE-EehhhccC---------
Confidence 1222222 234567886 5899999875 99999999 5678999999999999999974 55554432
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
.||+|++ |+.+++++|++|++||+|||+..|++
T Consensus 141 ---------------------------------~KP~p~~--------------~~~~~~~~~~~~~~~l~igDs~~di~ 173 (188)
T PRK10725 141 ---------------------------------HKPAPDT--------------FLRCAQLMGVQPTQCVVFEDADFGIQ 173 (188)
T ss_pred ---------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEeccHhhHH
Confidence 3999999 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEc
Q 020675 309 GAQRIGMPCVVMR 321 (323)
Q Consensus 309 aA~~aG~~~v~v~ 321 (323)
+|+++||++|+|.
T Consensus 174 aA~~aG~~~i~~~ 186 (188)
T PRK10725 174 AARAAGMDAVDVR 186 (188)
T ss_pred HHHHCCCEEEeec
Confidence 9999999999986
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=204.04 Aligned_cols=176 Identities=16% Similarity=0.204 Sum_probs=132.2
Q ss_pred CCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHH-------HHHHHhH-HHHH
Q 020675 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRM-------LVLFFNR-KNAL 151 (323)
Q Consensus 80 ~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~ 151 (323)
.+..+|+|||||||||+|+... +..+++++++++|++. ++.+.+..+.+.......+. ....... .+.+
T Consensus 58 ~~~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~~--~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 134 (273)
T PRK13225 58 YPQTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYDP--IDERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQL 134 (273)
T ss_pred hhhhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4456899999999999999986 8899999999999873 55555555544321111010 0011111 1122
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
.+. ...+.++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+.+ ++.++.
T Consensus 135 ~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn---~~~~~~~~~L~~~gl~~~F~~v-i~~~~~-------------- 194 (273)
T PRK13225 135 GDC--LPALQLFPGVADLLAQLRSRSLCLGILSS---NSRQNIEAFLQRQGLRSLFSVV-QAGTPI-------------- 194 (273)
T ss_pred Hhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhheEEE-EecCCC--------------
Confidence 221 23467899999999999999999999999 6679999999999999999974 443222
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
+|.|++ |..++++++++|++|+||||+..|+++|+
T Consensus 195 -------------------------------~~k~~~--------------~~~~l~~~~~~p~~~l~IGDs~~Di~aA~ 229 (273)
T PRK13225 195 -------------------------------LSKRRA--------------LSQLVAREGWQPAAVMYVGDETRDVEAAR 229 (273)
T ss_pred -------------------------------CCCHHH--------------HHHHHHHhCcChhHEEEECCCHHHHHHHH
Confidence 222344 88999999999999999999999999999
Q ss_pred HcCCCEEEEcCC
Q 020675 312 RIGMPCVVMRSR 323 (323)
Q Consensus 312 ~aG~~~v~v~~g 323 (323)
++||.+|+|.+|
T Consensus 230 ~AG~~~I~v~~g 241 (273)
T PRK13225 230 QVGLIAVAVTWG 241 (273)
T ss_pred HCCCeEEEEecC
Confidence 999999999875
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.2e-25 Score=196.39 Aligned_cols=175 Identities=19% Similarity=0.244 Sum_probs=125.0
Q ss_pred ceEEEEecCCccccccccchHHHHHHH---HHHcCCCCCCCCHH-HHHHHHc------ccCCc-HHHHHHHHHh------
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAP-IYTDLLR------KSAGD-EDRMLVLFFN------ 146 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~---~~~~g~~~~~~~~~-~~~~~~~------~~~~~-~~~~~~~~~~------ 146 (323)
+++|+||+||||+|+... +..++..+ +.++|++. +.+ .+..+.. ..... ..........
T Consensus 2 ~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLNV---DFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKL 77 (221)
T ss_pred ceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCcC---CHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHH
Confidence 689999999999999985 66776654 45667653 322 2221111 11111 1111111100
Q ss_pred ---HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhc
Q 020675 147 ---RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223 (323)
Q Consensus 147 ---~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~ 223 (323)
....+.+. ....+.++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.++ ++++..
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn---~~~~~~~~~l~~~~l~~~f~~i~-~~~~~~----- 147 (221)
T TIGR02253 78 VAAFVYAYHKL-KFAYLRVYPGVRDTLMELRESGYRLGIITD---GLPVKQWEKLERLGVRDFFDAVI-TSEEEG----- 147 (221)
T ss_pred HHHHHHHHHHH-HHHhCCCCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHhCChHHhccEEE-EeccCC-----
Confidence 01111111 122467999999999999999999999999 55678888999999999999754 444432
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
..||+|++ |+.+++++|++|++|+||||+
T Consensus 148 -------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~igDs 176 (221)
T TIGR02253 148 -------------------------------------VEKPHPKI--------------FYAALKRLGVKPEEAVMVGDR 176 (221)
T ss_pred -------------------------------------CCCCCHHH--------------HHHHHHHcCCChhhEEEECCC
Confidence 23999999 999999999999999999999
Q ss_pred h-hhHHHHHHcCCCEEEEcCC
Q 020675 304 Q-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 304 ~-~Di~aA~~aG~~~v~v~~g 323 (323)
. +|+.+|+++||.+|++.++
T Consensus 177 ~~~di~~A~~aG~~~i~~~~~ 197 (221)
T TIGR02253 177 LDKDIKGAKNLGMKTVWINQG 197 (221)
T ss_pred hHHHHHHHHHCCCEEEEECCC
Confidence 8 8999999999999999764
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-25 Score=215.12 Aligned_cols=176 Identities=21% Similarity=0.305 Sum_probs=134.8
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh-----------HHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-----------RKNA 150 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 150 (323)
..+|+||||+||||+|+... +..+++++++++|.. |+.+.+....+.............+. ..+.
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ---WDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPL 84 (382)
T ss_pred ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 34889999999999999996 999999999999986 55555555554332111111100000 0112
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHH-HcCCCccccceeechhhhhhhhhccccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~-~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
+.+. .....++||+.++|+.|+++|++++|+|| +....+...++ .+|+.++|+.+ ++++++..
T Consensus 85 ~~~~--~~~~~l~pGv~elL~~Lk~~g~~l~IvTn---~~~~~~~~~l~~~~gl~~~Fd~i-i~~d~v~~---------- 148 (382)
T PLN02940 85 LSEQ--WCNIKALPGANRLIKHLKSHGVPMALASN---SPRANIEAKISCHQGWKESFSVI-VGGDEVEK---------- 148 (382)
T ss_pred HHHH--HccCCCCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHhccChHhhCCEE-EehhhcCC----------
Confidence 2221 12467899999999999999999999999 45677777887 78999999975 55555432
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
.||+|++ |..+++++|++|++|++|||+..|+++
T Consensus 149 --------------------------------~KP~p~~--------------~~~a~~~lgv~p~~~l~VGDs~~Di~a 182 (382)
T PLN02940 149 --------------------------------GKPSPDI--------------FLEAAKRLNVEPSNCLVIEDSLPGVMA 182 (382)
T ss_pred --------------------------------CCCCHHH--------------HHHHHHHcCCChhHEEEEeCCHHHHHH
Confidence 3999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEEcCC
Q 020675 310 AQRIGMPCVVMRSR 323 (323)
Q Consensus 310 A~~aG~~~v~v~~g 323 (323)
|+++||.+|+|.++
T Consensus 183 A~~aGi~~I~v~~g 196 (382)
T PLN02940 183 GKAAGMEVIAVPSI 196 (382)
T ss_pred HHHcCCEEEEECCC
Confidence 99999999999864
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=201.26 Aligned_cols=177 Identities=19% Similarity=0.226 Sum_probs=132.5
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHH-HH----------HHHH-hHHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-ML----------VLFF-NRKNAL 151 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~-~~~~~~ 151 (323)
+|+|||||||||+|+... +..+++.+++++|.+. +..+.+....+........ .. .... ...+.+
T Consensus 13 ~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (272)
T PRK13223 13 PRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPP--AGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALF 89 (272)
T ss_pred CCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHH
Confidence 579999999999999996 9999999999999873 3444343443322110000 00 0000 001222
Q ss_pred HHHHhc--CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 152 DEFLAS--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 152 ~~~i~~--~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
.+.+.. ....++||+.++|+.|+++|++++|+|| ++...+..+++.+++..+|+.+ +++++...
T Consensus 90 ~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn---~~~~~~~~~l~~~~i~~~f~~i-~~~d~~~~---------- 155 (272)
T PRK13223 90 MEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITN---KPERFVAPLLDQMKIGRYFRWI-IGGDTLPQ---------- 155 (272)
T ss_pred HHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEEC---CcHHHHHHHHHHcCcHhhCeEE-EecCCCCC----------
Confidence 222221 2356899999999999999999999999 5677888999999999999864 55544322
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
.||+|++ |+.+++++|++|++|++|||+.+|+++
T Consensus 156 --------------------------------~Kp~p~~--------------~~~~~~~~g~~~~~~l~IGD~~~Di~a 189 (272)
T PRK13223 156 --------------------------------KKPDPAA--------------LLFVMKMAGVPPSQSLFVGDSRSDVLA 189 (272)
T ss_pred --------------------------------CCCCcHH--------------HHHHHHHhCCChhHEEEECCCHHHHHH
Confidence 3999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEEcCC
Q 020675 310 AQRIGMPCVVMRSR 323 (323)
Q Consensus 310 A~~aG~~~v~v~~g 323 (323)
|+++||.+++|.+|
T Consensus 190 A~~aGi~~i~v~~G 203 (272)
T PRK13223 190 AKAAGVQCVALSYG 203 (272)
T ss_pred HHHCCCeEEEEecC
Confidence 99999999999774
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=191.57 Aligned_cols=170 Identities=17% Similarity=0.200 Sum_probs=121.9
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHH-H---HH----------ccc-CCcHHHH----HHHHH
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT-D---LL----------RKS-AGDEDRM----LVLFF 145 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~-~---~~----------~~~-~~~~~~~----~~~~~ 145 (323)
|+|+||+||||+|+... +..+++++++++|++. ..+.+. . .. +.. +....++ ....+
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVEV---SPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF 76 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999885 8899999999999973 322111 1 11 000 1111111 11111
Q ss_pred hH------------HHHHHHHHh-cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceee
Q 020675 146 NR------------KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 212 (323)
Q Consensus 146 ~~------------~~~~~~~i~-~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~ 212 (323)
.. .+.+.+.+. .....++||+.++|+.|+++|++++|+||. .. .....++.+|+..+|+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~---~~-~~~~~l~~~~l~~~fd~i~- 151 (203)
T TIGR02252 77 GRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNF---DS-RLRGLLEALGLLEYFDFVV- 151 (203)
T ss_pred HhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCC---ch-hHHHHHHHCCcHHhcceEE-
Confidence 10 111112111 223578999999999999999999999994 33 3577889999999999754
Q ss_pred chhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCC
Q 020675 213 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 292 (323)
Q Consensus 213 s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv 292 (323)
++++.. ..||+|++ |+.+++++|+
T Consensus 152 ~s~~~~------------------------------------------~~KP~~~~--------------~~~~~~~~~~ 175 (203)
T TIGR02252 152 TSYEVG------------------------------------------AEKPDPKI--------------FQEALERAGI 175 (203)
T ss_pred eecccC------------------------------------------CCCCCHHH--------------HHHHHHHcCC
Confidence 433332 24999999 9999999999
Q ss_pred CCCcEEEEcCCh-hhHHHHHHcCCCEEE
Q 020675 293 PVRNCFLIAGSQ-SGVAGAQRIGMPCVV 319 (323)
Q Consensus 293 ~p~~~v~VGDs~-~Di~aA~~aG~~~v~ 319 (323)
+|++|++|||+. +||++|+++||++|+
T Consensus 176 ~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 176 SPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred ChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999999997 899999999999885
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=192.44 Aligned_cols=173 Identities=16% Similarity=0.215 Sum_probs=124.4
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHH--Hccc--------CCcHHHHHHH----HHh-
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDL--LRKS--------AGDEDRMLVL----FFN- 146 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~----~~~- 146 (323)
|++|+|+||+||||+|.. ...+++++++++|++. +.+.+..+ .+.. .......... ...
T Consensus 1 m~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (224)
T PRK09449 1 MKYDWILFDADETLFHFD---AFAGLQRMFSRYGVDF---TAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEK 74 (224)
T ss_pred CCccEEEEcCCCchhcch---hhHHHHHHHHHhCCCC---cHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 568999999999999854 3478899999999863 34333322 1110 0001111100 000
Q ss_pred -------HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhh
Q 020675 147 -------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (323)
Q Consensus 147 -------~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~ 219 (323)
..+.+.+.+. ....++||+.++|+.|+ +|++++|+|| +....++..++.+|+..+|+.++ ++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~L~-~~~~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~v~-~~~~~~- 147 (224)
T PRK09449 75 LNVTPGELNSAFLNAMA-EICTPLPGAVELLNALR-GKVKMGIITN---GFTELQQVRLERTGLRDYFDLLV-ISEQVG- 147 (224)
T ss_pred cCCCHHHHHHHHHHHHh-hcCccCccHHHHHHHHH-hCCeEEEEeC---CcHHHHHHHHHhCChHHHcCEEE-EECccC-
Confidence 0122222222 23679999999999999 6899999999 56788888999999999999864 444432
Q ss_pred hhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC-CcEE
Q 020675 220 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCF 298 (323)
Q Consensus 220 ~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p-~~~v 298 (323)
..||+|++ |+.+++++|+.+ ++|+
T Consensus 148 -----------------------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 148 -----------------------------------------VAKPDVAI--------------FDYALEQMGNPDRSRVL 172 (224)
T ss_pred -----------------------------------------CCCCCHHH--------------HHHHHHHcCCCCcccEE
Confidence 23999999 999999999854 8999
Q ss_pred EEcCCh-hhHHHHHHcCCCEEEEcC
Q 020675 299 LIAGSQ-SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~v~v~~ 322 (323)
||||+. +|+++|+++||.+|++.+
T Consensus 173 ~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 173 MVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred EEcCCcHHHHHHHHHCCCcEEEECC
Confidence 999998 699999999999999864
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.8e-25 Score=196.15 Aligned_cols=176 Identities=15% Similarity=0.109 Sum_probs=120.7
Q ss_pred CCceEEEEecCCccccccc--cchHHHHHHHH-HHcCCCCCCCCHHHHHHHHccc---CCc----HHHHHHHHHhH-HHH
Q 020675 82 PRDLAVLLEVDGVLVDAYR--FGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKS---AGD----EDRMLVLFFNR-KNA 150 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~--~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~-~~~ 150 (323)
.++|+|||||||||+|+.. ..+...+.+.+ +.+|.+. ++....+.+.. ... ..+.+...... ...
T Consensus 8 ~~~k~vIFDlDGTL~d~~~~~~~~~~~~~~~~~~~~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLAFDNYFWQKLVPETLGAQRGISP----QEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLDICA 83 (224)
T ss_pred ccCCEEEEcCCCCccchhhhchHHHhhHHHHHHHHhCcCH----HHHHHHHHHHHHHHcCccceecHHHHHHHhCCCHHH
Confidence 4578999999999999641 11333333333 5677752 33332221100 000 01111111100 011
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+... ......++||+.++|+.|+++|++++|+|| +....++..++.+|+.++|+.++ ++++...
T Consensus 84 ~~~~-~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~iv-~s~~~~~----------- 147 (224)
T PRK14988 84 MTTE-QGPRAVLREDTVPFLEALKASGKRRILLTN---AHPHNLAVKLEHTGLDAHLDLLL-STHTFGY----------- 147 (224)
T ss_pred HHHH-HhccCCcCCCHHHHHHHHHhCCCeEEEEeC---cCHHHHHHHHHHCCcHHHCCEEE-EeeeCCC-----------
Confidence 1111 123477999999999999999999999999 56788888999999999999754 4444322
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
.||+|++ |+.+++++|++|++|+||||+..|+++|
T Consensus 148 -------------------------------~KP~p~~--------------~~~~~~~~~~~p~~~l~igDs~~di~aA 182 (224)
T PRK14988 148 -------------------------------PKEDQRL--------------WQAVAEHTGLKAERTLFIDDSEPILDAA 182 (224)
T ss_pred -------------------------------CCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHHH
Confidence 3999999 9999999999999999999999999999
Q ss_pred HHcCCCE-EEEcC
Q 020675 311 QRIGMPC-VVMRS 322 (323)
Q Consensus 311 ~~aG~~~-v~v~~ 322 (323)
+++||++ ++|.+
T Consensus 183 ~~aG~~~~~~v~~ 195 (224)
T PRK14988 183 AQFGIRYCLGVTN 195 (224)
T ss_pred HHcCCeEEEEEeC
Confidence 9999984 66764
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=192.12 Aligned_cols=177 Identities=21% Similarity=0.246 Sum_probs=134.4
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh-------------H
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-------------R 147 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 147 (323)
.+.+++|+||+||||+|+... +..++..+++++|.+. ++.+.+....+... ..++...+. .
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 76 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLPP--AGEERVRTWVGNGA---DVLVERALTWAGREPDEELLEKL 76 (226)
T ss_pred CCcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhCccH---HHHHHHHHhhccCCccHHHHHHH
Confidence 467889999999999999875 8899999999999873 44444444443221 111111110 0
Q ss_pred HHHHHHHHh---cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcc
Q 020675 148 KNALDEFLA---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (323)
Q Consensus 148 ~~~~~~~i~---~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~ 224 (323)
...+.+.+. .....++||+.++|+.|+++|++++++|| +....++.+++.+|+..+|+.+ ++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~------ 146 (226)
T PRK13222 77 RELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTN---KPTPFVAPLLEALGIADYFSVV-IGGDSLP------ 146 (226)
T ss_pred HHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCccCccEE-EcCCCCC------
Confidence 111222111 12467999999999999999999999999 5678888999999999999864 4444332
Q ss_pred cccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh
Q 020675 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 304 (323)
Q Consensus 225 ~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~ 304 (323)
..||+|++ |+.++++++++|++|++|||+.
T Consensus 147 ------------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~i~igD~~ 176 (226)
T PRK13222 147 ------------------------------------NKKPDPAP--------------LLLACEKLGLDPEEMLFVGDSR 176 (226)
T ss_pred ------------------------------------CCCcChHH--------------HHHHHHHcCCChhheEEECCCH
Confidence 23999999 9999999999999999999999
Q ss_pred hhHHHHHHcCCCEEEEcCC
Q 020675 305 SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 305 ~Di~aA~~aG~~~v~v~~g 323 (323)
+|+++|+++|+.+|+|.+|
T Consensus 177 ~Di~~a~~~g~~~i~v~~g 195 (226)
T PRK13222 177 NDIQAARAAGCPSVGVTYG 195 (226)
T ss_pred HHHHHHHHCCCcEEEECcC
Confidence 9999999999999999865
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.4e-25 Score=192.23 Aligned_cols=104 Identities=16% Similarity=0.265 Sum_probs=93.4
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..+++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.+ ++++++..
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~gl~~~fd~i-~~s~~~~~------------------- 146 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSN---GSPAMLKSLVKHAGLDDPFDAV-LSADAVRA------------------- 146 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHCCChhhhhee-EehhhcCC-------------------
Confidence 467999999999999999999999999 5678899999999999999975 55544422
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.||+|++ |+.+++++|++|++|++|||+..|+.+|+++||++|
T Consensus 147 -----------------------~KP~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 147 -----------------------YKPAPQV--------------YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred -----------------------CCCCHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 3999999 999999999999999999999999999999999999
Q ss_pred EEcC
Q 020675 319 VMRS 322 (323)
Q Consensus 319 ~v~~ 322 (323)
+|..
T Consensus 190 ~v~r 193 (198)
T TIGR01428 190 WVNR 193 (198)
T ss_pred EecC
Confidence 9875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.2e-24 Score=189.91 Aligned_cols=174 Identities=16% Similarity=0.239 Sum_probs=128.1
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHc----------ccCCcHHHH----HHHHHh---
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR----------KSAGDEDRM----LVLFFN--- 146 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~--- 146 (323)
+|+|+||+||||+|+... +..++.++++++|++. +...+..+.. ......... +.....
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIPL---TEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYN 76 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCCc---cHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 479999999999999986 7889999999999863 2222211111 000111111 001110
Q ss_pred -------HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhh
Q 020675 147 -------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (323)
Q Consensus 147 -------~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~ 219 (323)
....+.+.. .....++||+.++|+.|+++ ++++|+|| +....+...++.+|+..+|+.++ ++++..
T Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn---~~~~~~~~~l~~~~l~~~fd~i~-~~~~~~- 149 (224)
T TIGR02254 77 TEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTN---GVRETQYKRLRKSGLFPFFDDIF-VSEDAG- 149 (224)
T ss_pred CCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeC---CchHHHHHHHHHCCcHhhcCEEE-EcCccC-
Confidence 012223322 22367999999999999999 99999999 56788899999999999999754 443332
Q ss_pred hhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc-CCCCCcEE
Q 020675 220 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCF 298 (323)
Q Consensus 220 ~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l-gv~p~~~v 298 (323)
..||+|++ |+.+++++ |++|++|+
T Consensus 150 -----------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 150 -----------------------------------------IQKPDKEI--------------FNYALERMPKFSKEEVL 174 (224)
T ss_pred -----------------------------------------CCCCCHHH--------------HHHHHHHhcCCCchheE
Confidence 24999999 99999999 99999999
Q ss_pred EEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 299 LIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
||||+. +|+++|+++||++|++.++
T Consensus 175 ~igD~~~~di~~A~~~G~~~i~~~~~ 200 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTCWMNPD 200 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCC
Confidence 999998 7999999999999998753
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=185.04 Aligned_cols=167 Identities=23% Similarity=0.373 Sum_probs=127.4
Q ss_pred EEEecCCccccccccchHHHHHH-HHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh--------HHHHHHHHHhc
Q 020675 87 VLLEVDGVLVDAYRFGNRQAFNV-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN--------RKNALDEFLAS 157 (323)
Q Consensus 87 ViFD~DGTLid~~~~~~~~a~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~i~~ 157 (323)
|+||+||||+|+... +.+++.. +++++|.+ ++.+.+....+.. ....+...+. ..+.+.+....
T Consensus 1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE---ISAEELRELFGKS---YEEALERLLERFGIDPEEIQELFREYNLE 73 (176)
T ss_dssp EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH---HHHHHHHHHTTSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC---CCHHHHHHHhCCC---HHHHHHHhhhccchhHHHHHHHhhhhhhh
Confidence 799999999999884 7788887 47778775 3334444433221 2222222111 12333443223
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
...+++||+.++|+.|+++|++++++|| +....++..++.+|+.++|+.++ ++++..
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn---~~~~~~~~~l~~~~~~~~f~~i~-~~~~~~------------------- 130 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSN---GSRERIERVLERLGLDDYFDEII-SSDDVG------------------- 130 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEES---SEHHHHHHHHHHTTHGGGCSEEE-EGGGSS-------------------
T ss_pred hccchhhhhhhhhhhcccccceeEEeec---CCccccccccccccccccccccc-ccchhh-------------------
Confidence 4578999999999999999999999999 66788999999999999999754 444432
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
..||+|++ |+.+++++|++|++|+||||+..|+++|+++||.+
T Consensus 131 -----------------------~~Kp~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 131 -----------------------SRKPDPDA--------------YRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp -----------------------SSTTSHHH--------------HHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred -----------------------hhhhHHHH--------------HHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 23999999 99999999999999999999999999999999999
Q ss_pred EEE
Q 020675 318 VVM 320 (323)
Q Consensus 318 v~v 320 (323)
|+|
T Consensus 174 i~v 176 (176)
T PF13419_consen 174 IWV 176 (176)
T ss_dssp EEE
T ss_pred EeC
Confidence 986
|
... |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=207.40 Aligned_cols=175 Identities=11% Similarity=0.160 Sum_probs=129.4
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCC--CCC-CCHHHHHHHHcccCCcHHHHHHHHHh---------H--
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD--CAN-WTAPIYTDLLRKSAGDEDRMLVLFFN---------R-- 147 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 147 (323)
+.+++|||||||||+|+... +.++|++++++++.. +.. .+.+.+...++..... .+..... .
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~---~~~~l~~~~~~~~~~~~~~ 314 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPK---VWEALLPDHSLEIREQTDA 314 (459)
T ss_pred HhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHH---HHHHHhhhcchhHHHHHHH
Confidence 34689999999999999996 999999999998521 001 1334555555543221 1111110 0
Q ss_pred --HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccc
Q 020675 148 --KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQF 225 (323)
Q Consensus 148 --~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~ 225 (323)
.+.+.+.+.....+++||+.++|+.|+++|++++|+|| +....+...++.+|+.++|+.+ ++++++..
T Consensus 315 ~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~---~~~~~~~~~l~~~~l~~~f~~i-~~~d~v~~------ 384 (459)
T PRK06698 315 YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASN---GLTEYLRAIVSYYDLDQWVTET-FSIEQINS------ 384 (459)
T ss_pred HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHCCcHhhccee-EecCCCCC------
Confidence 11222222234568999999999999999999999999 6679999999999999999985 55544421
Q ss_pred ccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh
Q 020675 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (323)
Q Consensus 226 ~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~ 305 (323)
||+|++ |..++++++ |++|++|||+.+
T Consensus 385 -------------------------------------~~kP~~--------------~~~al~~l~--~~~~v~VGDs~~ 411 (459)
T PRK06698 385 -------------------------------------LNKSDL--------------VKSILNKYD--IKEAAVVGDRLS 411 (459)
T ss_pred -------------------------------------CCCcHH--------------HHHHHHhcC--cceEEEEeCCHH
Confidence 677777 888998875 789999999999
Q ss_pred hHHHHHHcCCCEEEEcCC
Q 020675 306 GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 306 Di~aA~~aG~~~v~v~~g 323 (323)
|+.+|+++||.+|++.++
T Consensus 412 Di~aAk~AG~~~I~v~~~ 429 (459)
T PRK06698 412 DINAAKDNGLIAIGCNFD 429 (459)
T ss_pred HHHHHHHCCCeEEEEeCC
Confidence 999999999999999764
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=180.95 Aligned_cols=173 Identities=14% Similarity=0.133 Sum_probs=118.4
Q ss_pred EEEEecCCccccccccchHHHHHHHHH-----HcCCCCCCCCHHHHH-HHHcccCCcHHHHHHHHHhHHHHHHHHHhc--
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQ-----KLGLDCANWTAPIYT-DLLRKSAGDEDRMLVLFFNRKNALDEFLAS-- 157 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~-----~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-- 157 (323)
+||||+||||+|+... +..++++++. ++|++. .+...+. ..+...+.....+....-...+.+.+.+..
T Consensus 2 ~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSE--EEARVLRKDYYREYGTTLAGLMILHEIDADEYLRYVHGRL 78 (184)
T ss_pred eEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHHchHHHHHHHhhCCCHHHHHHHHhccC
Confidence 7999999999999875 7788887654 567652 1111111 111111111111111100001122222221
Q ss_pred --CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 158 --KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 158 --~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
..++++||+.++|+.|+ ++++|+|| +....+...++.+|+..+|+.+ +++++.....
T Consensus 79 ~~~~~~~~~g~~~~L~~L~---~~~~i~Tn---~~~~~~~~~l~~~gl~~~fd~i-~~~~~~~~~~-------------- 137 (184)
T TIGR01993 79 PYEKLKPDPELRNLLLRLP---GRKIIFTN---GDRAHARRALNRLGIEDCFDGI-FCFDTANPDY-------------- 137 (184)
T ss_pred CHHhCCCCHHHHHHHHhCC---CCEEEEeC---CCHHHHHHHHHHcCcHhhhCeE-EEeecccCcc--------------
Confidence 24668999999999997 58999999 5678899999999999999975 4444332100
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
...||+|++ |+.+++++|++|++|+||||+..|+++|+++||
T Consensus 138 ------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 138 ------------------------LLPKPSPQA--------------YEKALREAGVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred ------------------------CCCCCCHHH--------------HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCC
Confidence 013999999 999999999999999999999999999999999
Q ss_pred CEEEE
Q 020675 316 PCVVM 320 (323)
Q Consensus 316 ~~v~v 320 (323)
++|+|
T Consensus 180 ~~i~v 184 (184)
T TIGR01993 180 KTVLV 184 (184)
T ss_pred EEeeC
Confidence 99986
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.9e-23 Score=219.14 Aligned_cols=179 Identities=21% Similarity=0.280 Sum_probs=135.6
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH-----------H-hHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF-----------F-NRK 148 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~ 148 (323)
-+++|+|||||||||+|+... +.++|+++++++|++ ++.+.+..+.+............. . ...
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~---it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 147 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVE---VTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFF 147 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 467899999999999999996 899999999999986 455555555443211111000000 0 001
Q ss_pred HHHHHHHh-cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC-ccccceeechhhhhhhhhcccc
Q 020675 149 NALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 149 ~~~~~~i~-~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~-~~fd~~v~s~~~~~~~~~~~~~ 226 (323)
+.+.+.+. .....++||+.++|+.|+++|++++|+|| .....++..++.+|+. .+|+.+ ++++++..
T Consensus 148 ~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn---~~~~~~~~~L~~~gl~~~~Fd~i-v~~~~~~~------- 216 (1057)
T PLN02919 148 EIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASS---ADRIKVDANLAAAGLPLSMFDAI-VSADAFEN------- 216 (1057)
T ss_pred HHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHcCCChhHCCEE-EECccccc-------
Confidence 12222211 12234799999999999999999999999 5678889999999996 789875 45544432
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
.||+|++ |+.+++++|++|++|++|||+..|
T Consensus 217 -----------------------------------~KP~Pe~--------------~~~a~~~lgv~p~e~v~IgDs~~D 247 (1057)
T PLN02919 217 -----------------------------------LKPAPDI--------------FLAAAKILGVPTSECVVIEDALAG 247 (1057)
T ss_pred -----------------------------------CCCCHHH--------------HHHHHHHcCcCcccEEEEcCCHHH
Confidence 3999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 020675 307 VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~g 323 (323)
+++|+++||++|+|.++
T Consensus 248 i~AA~~aGm~~I~v~~~ 264 (1057)
T PLN02919 248 VQAARAAGMRCIAVTTT 264 (1057)
T ss_pred HHHHHHcCCEEEEECCC
Confidence 99999999999999864
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=184.87 Aligned_cols=175 Identities=14% Similarity=0.129 Sum_probs=114.9
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCC-----------cHHHHHHHHHhH-----
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-----------DEDRMLVLFFNR----- 147 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----- 147 (323)
+|+|||||||||+|+.. ...+|...+...|++ ..+....+.+.... ....+...+...
T Consensus 2 ik~viFDldGtL~d~~~--~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 75 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG--VMRRWETERGLPGLK----DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRL 75 (211)
T ss_pred ceEEEEecCCceecCHH--HHHHHHHHcCCCCCc----cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhcccc
Confidence 57999999999999854 445666554444443 12222222221111 111111111100
Q ss_pred -----HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhh
Q 020675 148 -----KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222 (323)
Q Consensus 148 -----~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~ 222 (323)
...+.........+++||+.++|+.|+++|++++|+||.... .......+..+++..+|+.++ ++++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~-~~~~~~~~~~~~l~~~fd~v~-~s~~~~---- 149 (211)
T TIGR02247 76 GHDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPT-DHSAEEALLPGDIMALFDAVV-ESCLEG---- 149 (211)
T ss_pred CCCcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCc-cchhhhHhhhhhhHhhCCEEE-EeeecC----
Confidence 011111122235779999999999999999999999994311 111233344568888999754 333332
Q ss_pred cccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 020675 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (323)
Q Consensus 223 ~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGD 302 (323)
..||+|++ |+.+++++|++|++|+||||
T Consensus 150 --------------------------------------~~KP~p~~--------------~~~~~~~~g~~~~~~l~i~D 177 (211)
T TIGR02247 150 --------------------------------------LRKPDPRI--------------YQLMLERLGVAPEECVFLDD 177 (211)
T ss_pred --------------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcC
Confidence 23999999 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEEcC
Q 020675 303 SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 303 s~~Di~aA~~aG~~~v~v~~ 322 (323)
+..|+.+|+++||.+|++.+
T Consensus 178 ~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 178 LGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred CHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999875
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=178.41 Aligned_cols=164 Identities=13% Similarity=0.124 Sum_probs=120.8
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCc--H---HHHHHHHHh--------------
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD--E---DRMLVLFFN-------------- 146 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~-------------- 146 (323)
+|||||||||+|+... +..+++.+++++|.. ..+.+.+..+.+..... . ...+...+.
T Consensus 2 ~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
T TIGR01548 2 ALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV--SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLE 78 (197)
T ss_pred ceEEecCceEEechHH-HHHHHHHHHHHHcCC--CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHH
Confidence 7999999999999996 999999999999853 24556666665532211 0 000000000
Q ss_pred -HHHHHHHHHhcC------------CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeec
Q 020675 147 -RKNALDEFLASK------------DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 213 (323)
Q Consensus 147 -~~~~~~~~i~~~------------~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s 213 (323)
..+.+.+++... ...+.+++.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.+ ++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~~-~~ 154 (197)
T TIGR01548 79 AVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTG---RPRKDAAKFLTTHGLEILFPVQ-IW 154 (197)
T ss_pred HHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECC---CCHHHHHHHHHHcCchhhCCEE-Ee
Confidence 012333332211 123556679999999999999999999 6678999999999999999874 45
Q ss_pred hhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC
Q 020675 214 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~ 293 (323)
+++... ||+|++ |..+++++|++
T Consensus 155 ~~~~~~-------------------------------------------KP~p~~--------------~~~~~~~~~~~ 177 (197)
T TIGR01548 155 MEDCPP-------------------------------------------KPNPEP--------------LILAAKALGVE 177 (197)
T ss_pred ecCCCC-------------------------------------------CcCHHH--------------HHHHHHHhCcC
Confidence 444321 999999 99999999999
Q ss_pred CCcEEEEcCChhhHHHHHHc
Q 020675 294 VRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 294 p~~~v~VGDs~~Di~aA~~a 313 (323)
|++|++|||+.+|+++|+++
T Consensus 178 ~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 178 ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999975
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-22 Score=181.82 Aligned_cols=173 Identities=17% Similarity=0.154 Sum_probs=116.7
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCC---CCCCCHHHHHHHHc---ccCCc----HHH----HHHHHHhH-
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD---CANWTAPIYTDLLR---KSAGD----EDR----MLVLFFNR- 147 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~---~~~~~----~~~----~~~~~~~~- 147 (323)
++|+|+||+||||+|+... +..+++++++.++.. ...|....+..+.. ..... ... .+...+..
T Consensus 9 ~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 4789999999999999985 788888877655211 11233332222221 10000 000 00000000
Q ss_pred ----H------HHHHHHHh--cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh
Q 020675 148 ----K------NALDEFLA--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 215 (323)
Q Consensus 148 ----~------~~~~~~i~--~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~ 215 (323)
. +...+.+. ...+.++||+.++|+.|++. ++++|+||+ +.. ++.+|+..+|+.++ +++
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~---~~~-----~~~~gl~~~fd~i~-~~~ 157 (238)
T PRK10748 88 GLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNG---NAQ-----PELFGLGDYFEFVL-RAG 157 (238)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECC---Cch-----HHHCCcHHhhceeE-ecc
Confidence 0 00101111 12367999999999999975 999999994 332 47899999999754 444
Q ss_pred hhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 020675 216 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 295 (323)
Q Consensus 216 ~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~ 295 (323)
+... .||+|++ |+.+++++|++|+
T Consensus 158 ~~~~------------------------------------------~KP~p~~--------------~~~a~~~~~~~~~ 181 (238)
T PRK10748 158 PHGR------------------------------------------SKPFSDM--------------YHLAAEKLNVPIG 181 (238)
T ss_pred cCCc------------------------------------------CCCcHHH--------------HHHHHHHcCCChh
Confidence 4322 3999999 9999999999999
Q ss_pred cEEEEcCC-hhhHHHHHHcCCCEEEEcC
Q 020675 296 NCFLIAGS-QSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 296 ~~v~VGDs-~~Di~aA~~aG~~~v~v~~ 322 (323)
+|+||||+ ..|+.+|+++||++|+|..
T Consensus 182 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~ 209 (238)
T PRK10748 182 EILHVGDDLTTDVAGAIRCGMQACWINP 209 (238)
T ss_pred HEEEEcCCcHHHHHHHHHCCCeEEEEcC
Confidence 99999999 5999999999999999864
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=181.53 Aligned_cols=181 Identities=14% Similarity=0.182 Sum_probs=129.7
Q ss_pred CCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCC-CHHHHHHHH----------cccCC--cHHHHHHHHHh
Q 020675 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW-TAPIYTDLL----------RKSAG--DEDRMLVLFFN 146 (323)
Q Consensus 80 ~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~-~~~~~~~~~----------~~~~~--~~~~~~~~~~~ 146 (323)
..|++|+|+||++|||+..... ....+.++.+.+|+++..- .+..+..-+ +...+ .....+...+.
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~ 81 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVE 81 (237)
T ss_pred cccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHH
Confidence 4678999999999999986653 6788999999999984210 011111111 11112 11222211111
Q ss_pred H----------HHHH----HHHHhc---CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 147 R----------KNAL----DEFLAS---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 147 ~----------~~~~----~~~i~~---~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
. .+.+ ...+.. ...+..+++.++++.||++|..++++||. +...+.++..+|+..+||+
T Consensus 82 ~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~----d~r~~~~l~~~~l~~~fD~ 157 (237)
T KOG3085|consen 82 STFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNF----DDRLRLLLLPLGLSAYFDF 157 (237)
T ss_pred HHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCC----cHHHHHHhhccCHHHhhhh
Confidence 1 1111 111111 24567789999999999999999999994 5667788999999999999
Q ss_pred eeechhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHH
Q 020675 210 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 289 (323)
Q Consensus 210 ~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~ 289 (323)
++.|++... .||||+| |+.++++
T Consensus 158 vv~S~e~g~-------------------------------------------~KPDp~I--------------f~~al~~ 180 (237)
T KOG3085|consen 158 VVESCEVGL-------------------------------------------EKPDPRI--------------FQLALER 180 (237)
T ss_pred hhhhhhhcc-------------------------------------------CCCChHH--------------HHHHHHH
Confidence 877665443 4999999 9999999
Q ss_pred cCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcC
Q 020675 290 AEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 290 lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~ 322 (323)
+|+.|++|+||||.. +|+++|+++||++++|-+
T Consensus 181 l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~ 214 (237)
T KOG3085|consen 181 LGVKPEECVHIGDLLENDYEGARNLGWHAILVDN 214 (237)
T ss_pred hCCChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence 999999999999985 789999999999999865
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=174.36 Aligned_cols=100 Identities=23% Similarity=0.317 Sum_probs=86.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
.+++||+.++|+.|+++|++++|+||. .... ...+.++|+..+|+.++.+ ++..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~---~~~~-~~~~~~~~l~~~f~~i~~~-~~~~--------------------- 137 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNS---PRDH-AVLVQELGLRDLFDVVIFS-GDVG--------------------- 137 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCC---chHH-HHHHHhcCCHHHCCEEEEc-CCCC---------------------
Confidence 679999999999999999999999994 4455 5566669999999986444 3322
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..||+|++ |+.+++++|++|++|++|||+..|+.+|+++||.+|+
T Consensus 138 ---------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 138 ---------------------RGKPDPDI--------------YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 23999999 9999999999999999999999999999999999998
Q ss_pred E
Q 020675 320 M 320 (323)
Q Consensus 320 v 320 (323)
|
T Consensus 183 v 183 (183)
T TIGR01509 183 V 183 (183)
T ss_pred C
Confidence 5
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-22 Score=174.62 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=87.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++||+.++|+.|+++|++++|+||+ +.......+.. .++..+|+.++ ++++..
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~---~~~~~~~~~~~~~~l~~~fd~v~-~s~~~~-------------------- 138 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNT---NRLHTTFWPEEYPEVRAAADHIY-LSQDLG-------------------- 138 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCC---chhhHHHHHhhchhHHHhcCEEE-EecccC--------------------
Confidence 458999999999999999999999994 44555555544 47888898754 444432
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++||++|
T Consensus 139 ----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 139 ----------------------MRKPEARI--------------YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred ----------------------CCCCCHHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 24999999 999999999999999999999999999999999999
Q ss_pred EEcCC
Q 020675 319 VMRSR 323 (323)
Q Consensus 319 ~v~~g 323 (323)
++.++
T Consensus 183 ~~~~~ 187 (199)
T PRK09456 183 LVTDK 187 (199)
T ss_pred EecCC
Confidence 98753
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=175.59 Aligned_cols=168 Identities=23% Similarity=0.289 Sum_probs=119.6
Q ss_pred cCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH------------HhHHHHHHHHHhcC
Q 020675 91 VDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF------------FNRKNALDEFLASK 158 (323)
Q Consensus 91 ~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~ 158 (323)
|||||+|+... +..+|.++++++|++ ++.+.+..+.+.........+... ....+.+.... ..
T Consensus 1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 75 (220)
T PLN02811 1 MDGLLLDTEKF-YTEVQEKILARYGKT---FDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDL-FP 75 (220)
T ss_pred CCCcceecHHH-HHHHHHHHHHHcCCC---CCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH-Hh
Confidence 79999999996 999999999999986 344444444443221111111100 00011111111 12
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHH-HHHHHcCCCccccceeechh--hhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR-SVVEKLGSERISKIKIVGNE--EVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~-~~l~~lgl~~~fd~~v~s~~--~~~~~~~~~~~~g~~v~~~~ 235 (323)
...++||+.++|+.|+++|++++|+||. ...... ...+..++.++|+.+ ++++ ++.
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~---~~~~~~~~~~~~~~l~~~f~~i-~~~~~~~~~----------------- 134 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGS---HKRHFDLKTQRHGELFSLMHHV-VTGDDPEVK----------------- 134 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCC---chhhHHHHHcccHHHHhhCCEE-EECChhhcc-----------------
Confidence 3678999999999999999999999994 333333 334445778889875 4444 332
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC---CCCCcEEEEcCChhhHHHHHH
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg---v~p~~~v~VGDs~~Di~aA~~ 312 (323)
..||+|++ |..+++++| ++|++|+||||+..|+++|++
T Consensus 135 -------------------------~~KP~p~~--------------~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~ 175 (220)
T PLN02811 135 -------------------------QGKPAPDI--------------FLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN 175 (220)
T ss_pred -------------------------CCCCCcHH--------------HHHHHHHhCCCCCCccceEEEeccHhhHHHHHH
Confidence 23999999 999999997 999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+||++|+|.++
T Consensus 176 aG~~~i~v~~~ 186 (220)
T PLN02811 176 AGMSVVMVPDP 186 (220)
T ss_pred CCCeEEEEeCC
Confidence 99999999764
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=165.51 Aligned_cols=154 Identities=20% Similarity=0.291 Sum_probs=114.9
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCChh
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLRPG 165 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~pg 165 (323)
+|+||+||||+|+... ...+|+++++++|.+ .+.+....+... ..+ .......+.+.. + ......+||
T Consensus 1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~g~~~---~~~-~~~~~~~~~~~~-~-~~~~~~~~g 68 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGED-----FQALKALRGLAE---ELL-YRIATSFEELLG-Y-DAEEAYIRG 68 (154)
T ss_pred CeEecCCCcccccHHH-HHHHHHHHHHHhccc-----HHHHHHHHccCh---HHH-HHHHHHHHHHhC-c-chhheeccC
Confidence 4899999999999875 889999999998864 334444443321 111 111111122222 1 123557899
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHH
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARK 245 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k 245 (323)
+.++|+.|+++|++++|+|| +....+...++.+ +..+|+.+ ++.++..
T Consensus 69 ~~e~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~~-l~~~f~~i-~~~~~~~--------------------------- 116 (154)
T TIGR01549 69 AADLLKRLKEAGIKLGIISN---GSLRAQKLLLRKH-LGDYFDLI-LGSDEFG--------------------------- 116 (154)
T ss_pred HHHHHHHHHHCcCeEEEEeC---CchHHHHHHHHHH-HHhcCcEE-EecCCCC---------------------------
Confidence 99999999999999999999 5678888888887 78888864 4444332
Q ss_pred HhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 246 AVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 246 ~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
.||+|++ |..+++++|++| +|++|||+..|+++|+++|
T Consensus 117 ----------------~Kp~~~~--------------~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 117 ----------------AKPEPEI--------------FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred ----------------CCcCHHH--------------HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2999999 999999999999 9999999999999999998
|
HAD subfamilies caused by an overly broad single model. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=174.59 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=91.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..+++|++.++|+.|+.+ ++++|+|| +....+...++.+|+.++||.++++.+..
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTN---g~~~~~~~~l~~~gl~~~Fd~v~~s~~~g--------------------- 151 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTN---GARPHQERKLRQLGLLDYFDAVFISEDVG--------------------- 151 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeC---CChHHHHHHHHHcCChhhhheEEEecccc---------------------
Confidence 478999999999999999 99999999 66789999999999999999976554322
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~ 317 (323)
..||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++
T Consensus 152 ----------------------~~KP~~~~--------------f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 152 ----------------------VAKPDPEI--------------FEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred ----------------------cCCCCcHH--------------HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 34999999 9999999999999999999996 5779999999999
Q ss_pred EEEcC
Q 020675 318 VVMRS 322 (323)
Q Consensus 318 v~v~~ 322 (323)
|++..
T Consensus 196 vwi~~ 200 (229)
T COG1011 196 VWINR 200 (229)
T ss_pred EEECC
Confidence 99864
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-21 Score=168.16 Aligned_cols=165 Identities=12% Similarity=0.109 Sum_probs=108.9
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCc-HHHHHH----HHHhHHHHHHHHHhcC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLV----LFFNRKNALDEFLASK 158 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~i~~~ 158 (323)
+|+||||+||||+|+. .++.++++++|++. +.+....+..... ...... ......+.+.+.....
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIPT-----DHILKMIQDERFRDPGELFGCDQELAKKLIEKYNNSDFIR 71 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCCH-----HHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhHHHHHH
Confidence 6899999999999954 34678888888852 2222222221110 011100 0000112222111123
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc---eeechhhhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI---KIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~---~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
...++||+.++|+.|++. ++++++||. ........++.+++..+|+. .+++.++
T Consensus 72 ~~~~~pG~~e~L~~L~~~-~~~~i~Tn~---~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~------------------- 128 (197)
T PHA02597 72 YLSAYDDALDVINKLKED-YDFVAVTAL---GDSIDALLNRQFNLNALFPGAFSEVLMCGH------------------- 128 (197)
T ss_pred hccCCCCHHHHHHHHHhc-CCEEEEeCC---ccchhHHHHhhCCHHHhCCCcccEEEEecc-------------------
Confidence 366999999999999987 578888983 34555556677888765532 1233221
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc--
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-- 313 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a-- 313 (323)
.||+|++ |+.+++++| |++++||||+..|+++|+++
T Consensus 129 --------------------------~~~kp~~--------------~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~ 166 (197)
T PHA02597 129 --------------------------DESKEKL--------------FIKAKEKYG--DRVVCFVDDLAHNLDAAHEALS 166 (197)
T ss_pred --------------------------CcccHHH--------------HHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHc
Confidence 1677788 999999999 89999999999999999999
Q ss_pred CCCEEEEcCC
Q 020675 314 GMPCVVMRSR 323 (323)
Q Consensus 314 G~~~v~v~~g 323 (323)
||++|++.+|
T Consensus 167 Gi~~i~~~~~ 176 (197)
T PHA02597 167 QLPVIHMLRG 176 (197)
T ss_pred CCcEEEecch
Confidence 9999999875
|
2 hypothetical protein; Provisional |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=167.93 Aligned_cols=176 Identities=23% Similarity=0.347 Sum_probs=133.0
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh----H-------HHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----R-------KNA 150 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~ 150 (323)
..+-+++||+||||+|++.. +.+++++.+.++|.. ++.+......|....+..+.+..... . .+.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~---~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~ 83 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKP---YPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEI 83 (222)
T ss_pred cceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCC---ChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 34559999999999999997 999999999999985 55666655555443222222210000 0 111
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC-CCccccceeechh-hhhhhhhcccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNE-EVERSLYGQFVLG 228 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg-l~~~fd~~v~s~~-~~~~~~~~~~~~g 228 (323)
..++ .....+.||+.++++.|+.+|++++++|++ .....+..+.+++ +...|...+.+.+ ++.+
T Consensus 84 ~~~~--~~~~~~~PGa~kLv~~L~~~gip~alat~s---~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~--------- 149 (222)
T KOG2914|consen 84 LDRL--FMNSILMPGAEKLVNHLKNNGIPVALATSS---TSASFELKISRHEDIFKNFSHVVLGDDPEVKN--------- 149 (222)
T ss_pred HHHh--ccccccCCcHHHHHHHHHhCCCCeeEEecC---CcccHHHHHHHhhHHHHhcCCCeecCCccccC---------
Confidence 1221 234678999999999999999999999994 4577777788776 6777777655322 2222
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC-CcEEEEcCChhhH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGV 307 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p-~~~v~VGDs~~Di 307 (323)
.||+|++ |..+++++|..| +.|++++|+..++
T Consensus 150 ---------------------------------gKP~Pdi--------------~l~A~~~l~~~~~~k~lVfeds~~Gv 182 (222)
T KOG2914|consen 150 ---------------------------------GKPDPDI--------------YLKAAKRLGVPPPSKCLVFEDSPVGV 182 (222)
T ss_pred ---------------------------------CCCCchH--------------HHHHHHhcCCCCccceEEECCCHHHH
Confidence 3999999 999999999999 9999999999999
Q ss_pred HHHHHcCCCEEEEcC
Q 020675 308 AGAQRIGMPCVVMRS 322 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~ 322 (323)
++|++|||++|+|.+
T Consensus 183 ~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 183 QAAKAAGMQVVGVAT 197 (222)
T ss_pred HHHHhcCCeEEEecC
Confidence 999999999999975
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=166.72 Aligned_cols=178 Identities=16% Similarity=0.141 Sum_probs=117.2
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i 155 (323)
.+++|+|+|||||||+++.. +.++++.+|.+. ...+......... ..........+.. .+.+.+..
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~------~~~l~~~~g~~~--~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET------IDEIAKIAGVEE--EVSEITERAMRGE-LDFKASLRERVALLKGLPVELLKEVR 81 (219)
T ss_pred hccCCEEEEeCcccCCCchH------HHHHHHHhCCHH--HHHHHHHHHHcCC-CCHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45678999999999999754 356666777642 1112222222211 1111111111110 22333332
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
. ..+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+...+.. +.+.+.+..
T Consensus 82 -~-~~~~~~g~~~~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~~i~~~~~~~~~~~~~~----~~~~~~~~~----- 147 (219)
T TIGR00338 82 -E-NLPLTEGAEELVKTLKEKGYKVAVISG---GFDLFAEHVKDKLGLDAAFANRLEVEDGK----LTGLVEGPI----- 147 (219)
T ss_pred -h-cCCcCCCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceEeeEEEEECCE----EEEEecCcc-----
Confidence 2 367999999999999999999999999 67889999999999998887543332111 111111110
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
...+|.|.+ |+.++++++++|++|+||||+.+|+.+|+++|+
T Consensus 148 ------------------------~~~~~k~~~--------------~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~ 189 (219)
T TIGR00338 148 ------------------------VDASYKGKT--------------LLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189 (219)
T ss_pred ------------------------cCCcccHHH--------------HHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCC
Confidence 011456666 899999999999999999999999999999999
Q ss_pred CEEE
Q 020675 316 PCVV 319 (323)
Q Consensus 316 ~~v~ 319 (323)
.+++
T Consensus 190 ~i~~ 193 (219)
T TIGR00338 190 GIAF 193 (219)
T ss_pred eEEe
Confidence 8654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-20 Score=162.85 Aligned_cols=157 Identities=17% Similarity=0.185 Sum_probs=107.3
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCH-----HHHHHHHcccCCcHHH----HHHHHHhH---------
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-----PIYTDLLRKSAGDEDR----MLVLFFNR--------- 147 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~--------- 147 (323)
+|+||+||||+|++.. +..++++++.+.+.....|.. .......+.. ..... ........
T Consensus 1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~ 78 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDR-RAFPEDTVRALRYIADRLGLDAEPKY 78 (175)
T ss_pred CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCc-CCHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 5899999999999985 888888887764431001221 1111111111 00001 11111110
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
.+.+.+.. ..++++||+.++|+ +++|+|| +....+...++++|+..+|+.+ ++++++..
T Consensus 79 ~~~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~v-~~~~~~~~-------- 137 (175)
T TIGR01493 79 GERLRDAY--KNLPPWPDSAAALA-------RVAILSN---ASHWAFDQFAQQAGLPWYFDRA-FSVDTVRA-------- 137 (175)
T ss_pred HHHHHHHH--hcCCCCCchHHHHH-------HHhhhhC---CCHHHHHHHHHHCCCHHHHhhh-ccHhhcCC--------
Confidence 11222212 24679999999998 3889999 5678889999999999999974 56655432
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
.||+|++ |+.+++++|++|++|+||||+..|+
T Consensus 138 ----------------------------------~KP~p~~--------------f~~~~~~~~~~p~~~l~vgD~~~Di 169 (175)
T TIGR01493 138 ----------------------------------YKPDPVV--------------YELVFDTVGLPPDRVLMVAAHQWDL 169 (175)
T ss_pred ----------------------------------CCCCHHH--------------HHHHHHHHCCCHHHeEeEecChhhH
Confidence 3999999 9999999999999999999999999
Q ss_pred HHHHHc
Q 020675 308 AGAQRI 313 (323)
Q Consensus 308 ~aA~~a 313 (323)
.+|+++
T Consensus 170 ~~A~~~ 175 (175)
T TIGR01493 170 IGARKF 175 (175)
T ss_pred HHHhcC
Confidence 999874
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-19 Score=156.04 Aligned_cols=178 Identities=13% Similarity=0.164 Sum_probs=114.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHH---HH-h-----HHHHHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL---FF-N-----RKNALDEF 154 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-----~~~~~~~~ 154 (323)
+|+|+|||||||+|.... +..+...+|... ....... .+............. .+ . ..+.+.+.
T Consensus 4 ~k~viFD~DGTLid~~~~-----~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVMSS-----WEYLHRRLETCG--LAKKNAE-LFFSGRISYEEWARLDASLWKRRSGRLRREEVEEI 75 (201)
T ss_pred ceEEEEeCCCCCcCCccH-----HHHHHHHhCchH--HHHHHHH-HHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHH
Confidence 789999999999997652 233334455541 1111111 111111111111110 11 0 01223333
Q ss_pred HhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccC
Q 020675 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 155 i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
+ ..++++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+.+.+..
T Consensus 76 ~--~~~~~~~g~~e~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~g----------------- 133 (201)
T TIGR01491 76 F--KEISLRDYAEELVRWLKEKGLKTAIVSG---GIMCLAKKVAEKLNPDYVYSNELVFDEKG----------------- 133 (201)
T ss_pred H--HhCCCCccHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHhCCCeEEEEEEEEcCCC-----------------
Confidence 2 2367999999999999999999999999 67899999999999998887654433211
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
..||++... ..+.++.+. ++.+++++|+++++++||||+.+|+.+|+++|
T Consensus 134 --------------------------~~~p~~~~~-~~~~~k~~~---~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag 183 (201)
T TIGR01491 134 --------------------------FIQPDGIVR-VTFDNKGEA---VERLKRELNPSLTETVAVGDSKNDLPMFEVAD 183 (201)
T ss_pred --------------------------eEecceeeE-EccccHHHH---HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcC
Confidence 114443220 012222222 67888999999999999999999999999999
Q ss_pred CCEEEEc
Q 020675 315 MPCVVMR 321 (323)
Q Consensus 315 ~~~v~v~ 321 (323)
+.+++..
T Consensus 184 ~~~a~~~ 190 (201)
T TIGR01491 184 ISISLGD 190 (201)
T ss_pred CeEEECC
Confidence 9887754
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.8e-19 Score=159.07 Aligned_cols=180 Identities=14% Similarity=0.137 Sum_probs=114.6
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh----HHHHHHHHHhc
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----RKNALDEFLAS 157 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ 157 (323)
+++|+|+|||||||++++. +.++++++|... ...+.+..+.+.... ..+.....+. ..+.+.+.+..
T Consensus 10 ~~~k~viFDfDGTL~~~~~------~~~~~~~~g~~~--~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG------IDELAEFCGAGE--AVAEWTAKAMGGSVP-FEEALAARLSLFKPSLSQVEEFLEK 80 (224)
T ss_pred ccCCEEEEeCCCcccchHH------HHHHHHHcCChH--HHHHHHHHHHCCCCC-HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5688999999999999865 377888888741 113334444432222 2221111111 12334444443
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC--ccccceeechhhhhhhhhcccccccccccCc
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~--~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
....++||+.++|+.|+++|++++|+|+ +....++.+++.+|+. .+|...+...++.. +.|....
T Consensus 81 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~-------~~g~~~~--- 147 (224)
T PLN02954 81 RPPRLSPGIPELVKKLRARGTDVYLVSG---GFRQMIAPVAAILGIPPENIFANQILFGDSGE-------YAGFDEN--- 147 (224)
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc-------EECccCC---
Confidence 3456899999999999999999999999 6789999999999997 46654332221110 0000000
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
++. ...+|.|++ ++.+++++|. ++|++|||+.+|+.+|+++|+
T Consensus 148 ~~~---------------------~~~~~K~~~--------------i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~ 190 (224)
T PLN02954 148 EPT---------------------SRSGGKAEA--------------VQHIKKKHGY--KTMVMIGDGATDLEARKPGGA 190 (224)
T ss_pred Ccc---------------------cCCccHHHH--------------HHHHHHHcCC--CceEEEeCCHHHHHhhhcCCC
Confidence 000 001333344 7788888875 689999999999999999998
Q ss_pred CEEEE
Q 020675 316 PCVVM 320 (323)
Q Consensus 316 ~~v~v 320 (323)
.++..
T Consensus 191 ~~~~~ 195 (224)
T PLN02954 191 DLFIG 195 (224)
T ss_pred CEEEe
Confidence 87654
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-19 Score=151.48 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCC------------hHHHHHHHHHcCCCcc--ccceeechhhhhhhhhcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERI--SKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~------------~~~~~~~l~~lgl~~~--fd~~v~s~~~~~~~~~~~~~ 226 (323)
.++||+.++|+.|+++|++++|+||..+.. ...+...++.+|+... |...+..+++.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------- 97 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNC--------- 97 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCC---------
Confidence 479999999999999999999999943100 1456677888888632 21111111111
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
+..||+|++ |+.+++++|++|++|+||||+..|
T Consensus 98 ---------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~i~IGDs~~D 130 (147)
T TIGR01656 98 ---------------------------------SCRKPKPGL--------------ILEALKRLGVDASRSLVVGDRLRD 130 (147)
T ss_pred ---------------------------------CCCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHH
Confidence 124999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 020675 307 VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~g 323 (323)
+++|+++||++|+|..|
T Consensus 131 i~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 131 LQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHCCCCEEEecCC
Confidence 99999999999999765
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-18 Score=160.40 Aligned_cols=178 Identities=15% Similarity=0.146 Sum_probs=116.9
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i 155 (323)
...++.|+|||||||+.. +++.++++..|... ...+.....+... -.........+.. ...+.+.
T Consensus 107 ~~~~~LvvfDmDGTLI~~------e~i~eia~~~g~~~--~v~~it~~~m~Ge-ldf~esl~~rv~~l~g~~~~il~~v- 176 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQI------ECIDEIAKLAGTGE--EVAEVTERAMRGE-LDFEASLRQRVATLKGADANILQQV- 176 (322)
T ss_pred ccCCCEEEEECCCCCcch------HHHHHHHHHhCCch--HHHHHHHHHHcCC-cCHHHHHHHHHHHhCCCCHHHHHHH-
Confidence 346789999999999943 45677777777752 1112222222211 1111111111110 1223332
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
. ..++++||++++|+.|+++|++++|+|+ ++....+.+++++|++..+...+. ...+.+++.+.|..+
T Consensus 177 ~-~~l~l~pGa~elL~~Lk~~G~~~aIvSg---g~~~~~~~l~~~Lgld~~~an~le----i~dg~ltg~v~g~iv---- 244 (322)
T PRK11133 177 R-ENLPLMPGLTELVLKLQALGWKVAIASG---GFTYFADYLRDKLRLDAAVANELE----IMDGKLTGNVLGDIV---- 244 (322)
T ss_pred H-HhCCCChhHHHHHHHHHHcCCEEEEEEC---CcchhHHHHHHHcCCCeEEEeEEE----EECCEEEeEecCccC----
Confidence 2 2478999999999999999999999999 667788889999999876543221 111222222323211
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
..||.+++ ++.+++++|+++++|++|||+.||+.|++.||+
T Consensus 245 -------------------------~~k~K~~~--------------L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGl 285 (322)
T PRK11133 245 -------------------------DAQYKADT--------------LTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGL 285 (322)
T ss_pred -------------------------CcccHHHH--------------HHHHHHHcCCChhhEEEEECCHHHHHHHHHCCC
Confidence 12566666 899999999999999999999999999999999
Q ss_pred CEEE
Q 020675 316 PCVV 319 (323)
Q Consensus 316 ~~v~ 319 (323)
.+++
T Consensus 286 giA~ 289 (322)
T PRK11133 286 GIAY 289 (322)
T ss_pred eEEe
Confidence 8876
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.9e-18 Score=152.01 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=84.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc---CCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l---gl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
..+++||+.++|+.|+++|++++|+|| +........++.. ++..+|+..+ . ... .
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn---~s~~~~~~~~~~~~~~~L~~~f~~~f-d-~~~-g---------------- 150 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSS---GSVPAQKLLFGHSDAGNLTPYFSGYF-D-TTV-G---------------- 150 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHhhccccchhhhcceEE-E-eCc-c----------------
Confidence 356999999999999999999999999 4566677777765 5666666532 1 111 0
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
.||+|++ |..+++++|++|++|+||||+..|+++|+++||
T Consensus 151 --------------------------~KP~p~~--------------y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~ 190 (220)
T TIGR01691 151 --------------------------LKTEAQS--------------YVKIAGQLGSPPREILFLSDIINELDAARKAGL 190 (220)
T ss_pred --------------------------cCCCHHH--------------HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCC
Confidence 2999999 999999999999999999999999999999999
Q ss_pred CEEEEcC
Q 020675 316 PCVVMRS 322 (323)
Q Consensus 316 ~~v~v~~ 322 (323)
.+|++.+
T Consensus 191 ~ti~v~r 197 (220)
T TIGR01691 191 HTGQLVR 197 (220)
T ss_pred EEEEEEC
Confidence 9999864
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-18 Score=149.20 Aligned_cols=116 Identities=10% Similarity=0.074 Sum_probs=81.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC-----C-------hHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----G-------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-----~-------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.++||+.++|+.|+++|++++|+||.+.. . .......+..+++. |+.++.+.... .
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~-~-------- 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHP-E-------- 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCC-c--------
Confidence 458999999999999999999999995310 0 12334556666665 44432221100 0
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
+.+.. ....+.+||+|++ |..+++++|++|++|+||||+..|+
T Consensus 94 ~~~~~-----------------------~~~~~~~KP~p~~--------------~~~a~~~~~~~~~~~v~VGDs~~Di 136 (176)
T TIGR00213 94 GVEEF-----------------------RQVCDCRKPKPGM--------------LLQARKELHIDMAQSYMVGDKLEDM 136 (176)
T ss_pred ccccc-----------------------cCCCCCCCCCHHH--------------HHHHHHHcCcChhhEEEEcCCHHHH
Confidence 00000 0001235999999 9999999999999999999999999
Q ss_pred HHHHHcCCCE-EEEcCC
Q 020675 308 AGAQRIGMPC-VVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~-v~v~~g 323 (323)
++|+++|+++ ++|.+|
T Consensus 137 ~aA~~aG~~~~i~v~~g 153 (176)
T TIGR00213 137 QAGVAAKVKTNVLVRTG 153 (176)
T ss_pred HHHHHCCCcEEEEEecC
Confidence 9999999998 788765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-18 Score=147.94 Aligned_cols=106 Identities=9% Similarity=0.124 Sum_probs=87.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC------------ChHHHHHHHHHcCCCccccceeec----hhhhhhhhhc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVG----NEEVERSLYG 223 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~------------~~~~~~~~l~~lgl~~~fd~~v~s----~~~~~~~~~~ 223 (323)
++++||+.++|+.|+++|++++|+||.+.- ....+..+++.+|+. |+.++++ +++.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~------ 99 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNC------ 99 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCC------
Confidence 458999999999999999999999994200 235677889999997 7654444 2222
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
+.+||+|++ |+.++++++++|++|+||||+
T Consensus 100 ------------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~l~IGD~ 129 (161)
T TIGR01261 100 ------------------------------------DCRKPKIKL--------------LEPYLKKNLIDKARSYVIGDR 129 (161)
T ss_pred ------------------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEeCC
Confidence 134999999 999999999999999999999
Q ss_pred hhhHHHHHHcCCCEEEEcCC
Q 020675 304 QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~~g 323 (323)
.+|+++|+++||.++++.++
T Consensus 130 ~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 130 ETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred HHHHHHHHHCCCeEEEEChh
Confidence 99999999999999999764
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-18 Score=140.00 Aligned_cols=97 Identities=14% Similarity=0.177 Sum_probs=82.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCC--------hHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~--------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
.++||+.++|+.|+++|++++|+|| +. ...+...++.+++...+. +++. .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn---~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~--~--------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTN---QSGIGRGKFSSGRVARRLEELGVPIDVL--YACP--H--------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEEC---CccccccHHHHHHHHHHHHHCCCCEEEE--EECC--C---------------
Confidence 3789999999999999999999999 44 567888899999863322 2222 1
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc-CCCCCcEEEEcC-ChhhHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCFLIAG-SQSGVAGA 310 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l-gv~p~~~v~VGD-s~~Di~aA 310 (323)
..||+|++ |+.+++++ +++|++++|||| +..|+.+|
T Consensus 83 ----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A 120 (132)
T TIGR01662 83 ----------------------------CRKPKPGM--------------FLEALKRFNEIDPEESVYVGDQDLTDLQAA 120 (132)
T ss_pred ----------------------------CCCCChHH--------------HHHHHHHcCCCChhheEEEcCCCcccHHHH
Confidence 13999999 99999999 599999999999 79999999
Q ss_pred HHcCCCEEEEc
Q 020675 311 QRIGMPCVVMR 321 (323)
Q Consensus 311 ~~aG~~~v~v~ 321 (323)
+++|+.+|++.
T Consensus 121 ~~~Gi~~i~~~ 131 (132)
T TIGR01662 121 KRAGLAFILVA 131 (132)
T ss_pred HHCCCeEEEee
Confidence 99999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=144.94 Aligned_cols=184 Identities=15% Similarity=0.164 Sum_probs=126.5
Q ss_pred CCCceEEEEecCCccccccccchHHHHH----HHH-HHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-HHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFN----VAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-KNALDEF 154 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~----~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 154 (323)
.+.++.++||+|.||+.... +...+.. +.| .++|++.. -..+....++...+............. ...|.++
T Consensus 12 ~~~~~~l~FDiDdtLYp~St-~i~~~~~~nI~~f~~eklgi~~e-~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~ 89 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLST-GIQLMMRNNIQEFFVEKLGISEE-EAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRF 89 (244)
T ss_pred CccceEEEEecccccccCch-hHHHHHHHHHHHHHHHHhCCChh-hhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHH
Confidence 34789999999999998765 3444443 443 45888741 112232233222211111221111111 3455555
Q ss_pred Hh----cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 155 LA----SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 155 i~----~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+. -..++|.+-.+++|-.|++++ .++.|| +....+..++.++|++++|+.++...... +.+.
T Consensus 90 V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTN---a~k~HA~r~Lk~LGieDcFegii~~e~~n---------p~~~ 155 (244)
T KOG3109|consen 90 VHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTN---AYKVHAIRILKKLGIEDCFEGIICFETLN---------PIEK 155 (244)
T ss_pred hhccCcHhhcCCCHHHHHHHHhCcccc--EEEecC---CcHHHHHHHHHHhChHHhccceeEeeccC---------CCCC
Confidence 43 234789999999999999875 899999 67799999999999999999864432111 0000
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCChhhHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGVAG 309 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~v~VGDs~~Di~a 309 (323)
. -+.||+++. |+.+++..|++ |.+++||+||.++|++
T Consensus 156 ~----------------------------~vcKP~~~a--------------fE~a~k~agi~~p~~t~FfDDS~~NI~~ 193 (244)
T KOG3109|consen 156 T----------------------------VVCKPSEEA--------------FEKAMKVAGIDSPRNTYFFDDSERNIQT 193 (244)
T ss_pred c----------------------------eeecCCHHH--------------HHHHHHHhCCCCcCceEEEcCchhhHHH
Confidence 0 023999998 99999999998 9999999999999999
Q ss_pred HHHcCCCEEEEcC
Q 020675 310 AQRIGMPCVVMRS 322 (323)
Q Consensus 310 A~~aG~~~v~v~~ 322 (323)
|++.||++++|..
T Consensus 194 ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 194 AKEVGLKTVLVGR 206 (244)
T ss_pred HHhccceeEEEEe
Confidence 9999999999863
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-18 Score=148.51 Aligned_cols=110 Identities=15% Similarity=0.072 Sum_probs=82.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC----C--------hHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~----~--------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.++||+.++|+.|+++|++++|+||.+.. . ...+...++.+|+ .|+.++.+......
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~-------- 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPED-------- 97 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCC--------
Confidence 358999999999999999999999995210 0 1234455666776 35543332110000
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
. .+..||+|++ |..+++++|++|++|+||||+.+|+
T Consensus 98 --~----------------------------~~~~KP~p~~--------------~~~~~~~l~~~~~~~~~VgDs~~Di 133 (181)
T PRK08942 98 --G----------------------------CDCRKPKPGM--------------LLSIAERLNIDLAGSPMVGDSLRDL 133 (181)
T ss_pred --C----------------------------CcCCCCCHHH--------------HHHHHHHcCCChhhEEEEeCCHHHH
Confidence 0 0124999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
.+|+++||.+|++.+|
T Consensus 134 ~~A~~aG~~~i~v~~g 149 (181)
T PRK08942 134 QAAAAAGVTPVLVRTG 149 (181)
T ss_pred HHHHHCCCeEEEEcCC
Confidence 9999999999999764
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-19 Score=153.53 Aligned_cols=106 Identities=12% Similarity=0.034 Sum_probs=88.3
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC---------ccccceeechhhhhhhhhccccccc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE---------RISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~---------~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
...++||+.++|+.|+++|++++|+||. .....++.+++.+++. ++|+.++. +++..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~--~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~-~~~~~----------- 108 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWN--DVPEWAYEILGTFEITYAGKTVPMHSLFDDRIE-IYKPN----------- 108 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCC--CChHHHHHHHHhCCcCCCCCcccHHHhceeeee-ccCCc-----------
Confidence 4679999999999999999999999993 1568888999999998 99987543 33221
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc--CCCCCcEEEEcCChhhH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA--EKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l--gv~p~~~v~VGDs~~Di 307 (323)
..||+|.+ ++.+.+.+ |++|++|+||||+..|+
T Consensus 109 -------------------------------~~kp~~~i--------------~~~~~~~~~~gl~p~e~l~VgDs~~di 143 (174)
T TIGR01685 109 -------------------------------KAKQLEMI--------------LQKVNKVDPSVLKPAQILFFDDRTDNV 143 (174)
T ss_pred -------------------------------hHHHHHHH--------------HHHhhhcccCCCCHHHeEEEcChhHhH
Confidence 12677776 77777777 89999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
++|+++|+.+|++.+|
T Consensus 144 ~aA~~aGi~~i~v~~g 159 (174)
T TIGR01685 144 REVWGYGVTSCYCPSG 159 (174)
T ss_pred HHHHHhCCEEEEcCCC
Confidence 9999999999999875
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=148.07 Aligned_cols=172 Identities=15% Similarity=0.190 Sum_probs=105.6
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh-----HHHHHHHHHhc
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-----RKNALDEFLAS 157 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~ 157 (323)
..++|+|||||||++.+.. . . ++++++.. .| +++...+..... .........+. ..+.+.+.+..
T Consensus 2 ~~~~vifDfDgTi~~~d~~-~-~----~~~~~~~~--~~-~~i~~~~~~g~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~ 71 (219)
T PRK09552 2 MSIQIFCDFDGTITNNDNI-I-A----IMKKFAPP--EW-EELKDDILSQEL-SIQEGVGQMFQLLPSNLKEEIIQFLLE 71 (219)
T ss_pred CCcEEEEcCCCCCCcchhh-H-H----HHHHhCHH--HH-HHHHHHHHhCCc-CHHHHHHHHHHhCCCCchHHHHHHHHh
Confidence 3458999999999999874 2 2 34444332 12 233332322111 11111111111 12334343333
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc--cccce-eechhhhhhhhhcccccccccccC
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIK-IVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~--~fd~~-v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
..+++||+.++|+.|+++|++++|+|| +....++.+++.+ +.. ++... .+.++..
T Consensus 72 -~~~l~pG~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~----------------- 129 (219)
T PRK09552 72 -TAEIREGFHEFVQFVKENNIPFYVVSG---GMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYI----------------- 129 (219)
T ss_pred -CCCcCcCHHHHHHHHHHcCCeEEEECC---CcHHHHHHHHHHh-CCcCcEEEeEEEecCCee-----------------
Confidence 377999999999999999999999999 6778999999987 643 22100 1111111
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccC---CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDT---SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~---~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
...||+|.... ..... ...++++++..+++|+||||+.+|+.+|+
T Consensus 130 -------------------------~~~kp~p~~~~~~~~~~~~-------K~~~l~~~~~~~~~~i~iGDs~~Di~aa~ 177 (219)
T PRK09552 130 -------------------------TITWPHPCDEHCQNHCGCC-------KPSLIRKLSDTNDFHIVIGDSITDLEAAK 177 (219)
T ss_pred -------------------------EEeccCCccccccccCCCc-------hHHHHHHhccCCCCEEEEeCCHHHHHHHH
Confidence 12388886510 00000 23577889999999999999999999999
Q ss_pred HcCCCEE
Q 020675 312 RIGMPCV 318 (323)
Q Consensus 312 ~aG~~~v 318 (323)
+||+.++
T Consensus 178 ~Ag~~~a 184 (219)
T PRK09552 178 QADKVFA 184 (219)
T ss_pred HCCccee
Confidence 9999543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-17 Score=149.91 Aligned_cols=148 Identities=8% Similarity=0.086 Sum_probs=104.8
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCChh
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLRPG 165 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~pg 165 (323)
+|+||+||||+|+.+. . .+|.+. ++.+.+..+.+. ..+ +.|.+.. .....+.++
T Consensus 65 aViFDlDgTLlDSs~~-~---------~~G~~~--~s~~~~~~l~g~------~~w-------~~~~~~~-~~~s~p~~~ 118 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPG-F---------WRGKKT--FSPGSEDYLKNQ------VFW-------EKVNNGW-DEFSIPKEV 118 (237)
T ss_pred EEEEeCCCccccCcHH-H---------hCCccc--CCHHHhhhhcCh------HHH-------HHHHHhc-ccCCcchhH
Confidence 9999999999999984 2 267763 445544433331 111 2232222 223457888
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCC-ChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHH
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEAR 244 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~-~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 244 (323)
+.++|+.|+++|++++++||...+ .+..++.+++.+|+..+|+.+ +++++...
T Consensus 119 a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i-~~~d~~~~------------------------- 172 (237)
T TIGR01672 119 ARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVI-FAGDKPGQ------------------------- 172 (237)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEE-ECCCCCCC-------------------------
Confidence 999999999999999999995321 456888889899999999863 55433211
Q ss_pred HHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 245 KAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 245 k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
.||+|. .+++++|+ ++||||+.+|+.+|+++|+++|.|.+|
T Consensus 173 -----------------~Kp~~~-----------------~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 173 -----------------YQYTKT-----------------QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -----------------CCCCHH-----------------HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 145432 24566776 799999999999999999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.6e-17 Score=140.41 Aligned_cols=99 Identities=13% Similarity=0.179 Sum_probs=78.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCC---------hHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~---------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
++||+.++|+.|+++|++++|+||.+... ...+..+++.+|+.. +.+ +++++..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~i-i~~~~~~-------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVL-AATHAGL-------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEE-EecCCCC--------------
Confidence 68999999999999999999999943100 024677899999853 333 3332221
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCCh------
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQ------ 304 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg--v~p~~~v~VGDs~------ 304 (323)
..||+|++ |+.+++++| +++++++||||+.
T Consensus 106 ----------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~ 143 (166)
T TIGR01664 106 ----------------------------YRKPMTGM--------------WEYLQSQYNSPIKMTRSFYVGDAAGRKLDF 143 (166)
T ss_pred ----------------------------CCCCccHH--------------HHHHHHHcCCCCCchhcEEEECCCCCCCCC
Confidence 23999999 999999999 9999999999986
Q ss_pred --hhHHHHHHcCCCEEE
Q 020675 305 --SGVAGAQRIGMPCVV 319 (323)
Q Consensus 305 --~Di~aA~~aG~~~v~ 319 (323)
.|+++|+++|+.+++
T Consensus 144 ~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 144 SDADIKFAKNLGLEFKY 160 (166)
T ss_pred chhHHHHHHHCCCCcCC
Confidence 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.5e-17 Score=143.61 Aligned_cols=164 Identities=16% Similarity=0.109 Sum_probs=102.3
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCC----CHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW----TAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKD 159 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 159 (323)
+|+|+|||||||++ +.|..+++++|++. .+ ....+...++. ....+.......+.+...+ ..
T Consensus 1 ~~~v~FD~DGTL~~-------~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~i~~~~--~~ 66 (205)
T PRK13582 1 MEIVCLDLEGVLVP-------EIWIAFAEKTGIPE-LRATTRDIPDYDVLMKQ----RLDILDEHGLGLADIQEVI--AT 66 (205)
T ss_pred CeEEEEeCCCCChh-------hHHHHHHHHcCChH-HHHHhcCCCCHHHHHHH----HHHHHHHcCCCHHHHHHHH--Hh
Confidence 57999999999993 24566777888752 00 00111111110 0000100000022233322 23
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
.+++||+.++|+.|+++ ++++|+|| +....++.+++++|+..+|...+...++... .|.
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i-------~~~---------- 125 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSD---TFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI-------TGY---------- 125 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeC---CcHHHHHHHHHHcCCchhhcceEEECCCCeE-------ECc----------
Confidence 67899999999999999 99999999 6789999999999999888754333221100 000
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.+|.|.. ...+++.++..+++|+||||+.+|+.+|+++|+.+.
T Consensus 126 ----------------------~~~~p~~--------------k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 126 ----------------------DLRQPDG--------------KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred ----------------------cccccch--------------HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 0222222 234455666677899999999999999999998764
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.4e-17 Score=139.38 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=83.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC-----ChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-----~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
+.++||+.++|+.|+++|++++|+||...- ........++.+|++.+|......+++..
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~---------------- 90 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCE---------------- 90 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCC----------------
Confidence 348999999999999999999999994210 00123444777887776543221222221
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++|
T Consensus 91 --------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aG 130 (173)
T PRK06769 91 --------------------------CRKPSTGM--------------LLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVN 130 (173)
T ss_pred --------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCC
Confidence 24999999 99999999999999999999999999999999
Q ss_pred CCEEEEcCC
Q 020675 315 MPCVVMRSR 323 (323)
Q Consensus 315 ~~~v~v~~g 323 (323)
|.+|+|.+|
T Consensus 131 i~~i~v~~g 139 (173)
T PRK06769 131 ATTILVRTG 139 (173)
T ss_pred CeEEEEecC
Confidence 999999874
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=132.46 Aligned_cols=175 Identities=17% Similarity=0.160 Sum_probs=102.1
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH-HHHHHHHhH----HHHHHHHHhcCCC
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED-RMLVLFFNR----KNALDEFLASKDA 160 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~i~~~~~ 160 (323)
+|+||+||||++.... ..+++.++.. .| ...+............ ......... .+.+.+.+. ..
T Consensus 3 ~iiFD~dgTL~~~~~~------~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 71 (188)
T TIGR01489 3 VVVSDFDGTITLNDSD------DWITDKFGPP--EA-NRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLK--SA 71 (188)
T ss_pred EEEEeCCCcccCCCch------HHHHHhcCcc--hh-hHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHH--hC
Confidence 7899999999998774 2344445432 12 2333332221101100 111111111 223444332 26
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.+ ++++....+ .+...+
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~~~--------~g~~~~------ 133 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISD---GNDFFIDPVLEGIGEKDVFIEI-YSNPASFDN--------DGRHIV------ 133 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeC---CcHHHHHHHHHHcCChhheeEE-eccCceECC--------CCcEEE------
Confidence 8999999999999999999999999 6678899999999999999874 454332211 010000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCc--c-ccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSV--D-IDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p--~-i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
-|.. . ...+....++.+ ++.+++.. +++++||||+.+|+.+|+++++-+
T Consensus 134 ----------------------~~~~~~~~~~~~~g~~K~~~---~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 134 ----------------------WPHHCHGCCSCPCGCCKGKV---IHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred ----------------------ecCCCCccCcCCCCCCHHHH---HHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 0000 0 000001112222 45555543 899999999999999999997654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.8e-16 Score=125.07 Aligned_cols=118 Identities=18% Similarity=0.161 Sum_probs=88.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
...++|++.++|+.|+++|++++++|| +....++..++.+|+..+++.++ +.+...... . .......
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~---~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~--~--~~~~~~~----- 88 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATN---KSRREVLELLEELGLDDYFDPVI-TSNGAAIYY--P--KEGLFLG----- 88 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeC---chHHHHHHHHHHcCCchhhhhee-ccchhhhhc--c--ccccccc-----
Confidence 367999999999999999999999999 66899999999999987777643 333221100 0 0000000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.......||.+.. +..+++.++..++++++|||+.+|+++|+++|+.++
T Consensus 89 -----------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 89 -----------------GGPFDIGKPNPDK--------------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred -----------------ccccccCCCCHHH--------------HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 0001123788877 899999999999999999999999999999999998
Q ss_pred EE
Q 020675 319 VM 320 (323)
Q Consensus 319 ~v 320 (323)
+|
T Consensus 138 ~v 139 (139)
T cd01427 138 AV 139 (139)
T ss_pred eC
Confidence 75
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.3e-15 Score=133.23 Aligned_cols=116 Identities=17% Similarity=0.150 Sum_probs=78.4
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc-cc-eeechhhhhhhhhccccc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KI-KIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f-d~-~v~s~~~~~~~~~~~~~~ 227 (323)
...+++.. ..+++||+.++|+.|+++|++++|+|+ +....++.+++.++....+ .. .++.++..
T Consensus 60 ~~~~~~~~-~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~---------- 125 (214)
T TIGR03333 60 EITSFVLE-TAEIREGFREFVAFINEHGIPFYVISG---GMDFFVYPLLEGIVEKDRIYCNEADFSNEYI---------- 125 (214)
T ss_pred HHHHHHHh-cCcccccHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHhhCCcccEEeceeEeeCCee----------
Confidence 44444333 478999999999999999999999999 6778899999887543322 11 11111111
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
...||+|..+.. ..-... -..++++++..+++++||||+.+|
T Consensus 126 --------------------------------~~~~p~~~~~~~~~~cg~~-----K~~~l~~~~~~~~~~i~iGDg~~D 168 (214)
T TIGR03333 126 --------------------------------HIDWPHPCDGTCQNQCGCC-----KPSLIRKLSEPNDYHIVIGDSVTD 168 (214)
T ss_pred --------------------------------EEeCCCCCccccccCCCCC-----HHHHHHHHhhcCCcEEEEeCCHHH
Confidence 123788776210 000001 135567777788999999999999
Q ss_pred HHHHHHcCCC
Q 020675 307 VAGAQRIGMP 316 (323)
Q Consensus 307 i~aA~~aG~~ 316 (323)
+.+|+.||+.
T Consensus 169 ~~~a~~Ad~~ 178 (214)
T TIGR03333 169 VEAAKQSDLC 178 (214)
T ss_pred HHHHHhCCee
Confidence 9999999983
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-14 Score=128.24 Aligned_cols=175 Identities=18% Similarity=0.232 Sum_probs=115.5
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH---HHHHHHHhH-----HHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED---RMLVLFFNR-----KNALDE 153 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~ 153 (323)
+..+.++|||||||++. ..+..+....|... .+.........+.. ......... .+...+
T Consensus 3 ~~~~L~vFD~D~TLi~~------~~~~~~~~~~g~~~------~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~ 70 (212)
T COG0560 3 RMKKLAVFDLDGTLINA------ELIDELARGAGVGE------EVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEE 70 (212)
T ss_pred CccceEEEecccchhhH------HHHHHHHHHhCCHH------HHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHH
Confidence 35679999999999993 33455555555541 11111111111111 111111100 233333
Q ss_pred HHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccccc
Q 020675 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 154 ~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
..... .+++||+.++++.++++|++++|+|+ ++...++.+.+.+|++..+...+...+ +.|++.+.|..+..
T Consensus 71 ~~~~~-~~l~~ga~elv~~lk~~G~~v~iiSg---g~~~lv~~ia~~lg~d~~~an~l~~~d----G~ltG~v~g~~~~~ 142 (212)
T COG0560 71 VREEF-LRLTPGAEELVAALKAAGAKVVIISG---GFTFLVEPIAERLGIDYVVANELEIDD----GKLTGRVVGPICDG 142 (212)
T ss_pred HHHhc-CcCCccHHHHHHHHHHCCCEEEEEcC---ChHHHHHHHHHHhCCchheeeEEEEeC----CEEeceeeeeecCc
Confidence 33222 67999999999999999999999999 788999999999999988876543332 13444444433211
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
+.+. .+++..++.+|+++++++++|||.||+.+-+.+
T Consensus 143 ----------------------------------------~~K~---~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~a 179 (212)
T COG0560 143 ----------------------------------------EGKA---KALRELAAELGIPLEETVAYGDSANDLPMLEAA 179 (212)
T ss_pred ----------------------------------------chHH---HHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhC
Confidence 0111 126788999999999999999999999999999
Q ss_pred CCCEEE
Q 020675 314 GMPCVV 319 (323)
Q Consensus 314 G~~~v~ 319 (323)
|.+.+.
T Consensus 180 g~~ia~ 185 (212)
T COG0560 180 GLPIAV 185 (212)
T ss_pred CCCeEe
Confidence 998765
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.7e-14 Score=126.91 Aligned_cols=113 Identities=19% Similarity=0.250 Sum_probs=82.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.++|+.++++|++++|+|+ +....++.+++.+|++.+|...+...++. .++ |
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~---s~~~~v~~~~~~lg~~~~~~~~l~~~~~g---~~~----------g----- 144 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSA---SLTILVKPLARILGIDNAIGTRLEESEDG---IYT----------G----- 144 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCcceEecceEEcCCC---EEe----------C-----
Confidence 35899999999999999999999999 67899999999999998876533221111 111 1
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
|+.... ..++++.. .++.++++.++++++|++||||.+|+.+++.+|..++.
T Consensus 145 -----------------------~~~~~~--~~g~~K~~---~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 145 -----------------------NIDGNN--CKGEGKVH---ALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred -----------------------CccCCC--CCChHHHH---HHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 221100 01122222 26778889999999999999999999999999998876
Q ss_pred Ec
Q 020675 320 MR 321 (323)
Q Consensus 320 v~ 321 (323)
..
T Consensus 197 ~~ 198 (202)
T TIGR01490 197 NP 198 (202)
T ss_pred CC
Confidence 54
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.3e-15 Score=125.53 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=76.3
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
.++++||+.++|+.++++|++++|+|+ +....++.+++.+|+..+|...+...++.. ..|+. .
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~-------~~g~~--~----- 133 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGIDDVFANRLEFDDNGL-------LTGPI--E----- 133 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCchheeeeEEECCCCE-------EeCcc--C-----
Confidence 366899999999999999999999999 678899999999999887765433321110 00100 0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
.||.+ ....+... ++..++.+|++++++++|||+.+|+.+++.|
T Consensus 134 -----------------------~~~~~-----~~~~K~~~---l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 134 -----------------------GQVNP-----EGECKGKV---LKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -----------------------CcccC-----CcchHHHH---HHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 01111 11222222 5677788899999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.7e-15 Score=137.98 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=90.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++||+.++|+.|+++|++++++|| ......+..++.+++.. +|+.+ ++.++... |- ..
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~---r~~~~~~~~l~~l~~~~~~f~~i-~~~~~~~~--~~-----~~-------- 246 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSG---RDGVCEEDTVEWLRQTDIWFDDL-IGRPPDMH--FQ-----RE-------- 246 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeC---CChhhHHHHHHHHHHcCCchhhh-hCCcchhh--hc-----cc--------
Confidence 45899999999999999999999999 56788899999999997 88864 44332110 00 00
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCC-CCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv-~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
.+..||+|++ ++.++++++. .+++|++|||+.+|+++|+++||.+
T Consensus 247 --------------------~~~~kp~p~~--------------~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 247 --------------------QGDKRPDDVV--------------KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred --------------------CCCCCCcHHH--------------HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0123999999 8999999998 6799999999999999999999999
Q ss_pred EEEcCC
Q 020675 318 VVMRSR 323 (323)
Q Consensus 318 v~v~~g 323 (323)
|+|.+|
T Consensus 293 i~v~~g 298 (300)
T PHA02530 293 WQVAPG 298 (300)
T ss_pred EEecCC
Confidence 999886
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=131.50 Aligned_cols=99 Identities=6% Similarity=0.118 Sum_probs=75.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCC-ChHHHHHHHHHcCC--CccccceeechhhhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGS--ERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-~~~~~~~~l~~lgl--~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
...|+||++++|+.|+++|++++++||++.+ ....+..+++.+|+ +++|+.+ ++++..
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi-l~gd~~------------------ 172 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI-FAGDKP------------------ 172 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE-EcCCCC------------------
Confidence 3669999999999999999999999995421 24566667777999 8888754 443321
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
.||++.. +++++++ ++||||+.+|+.+|++||+
T Consensus 173 --------------------------~K~~K~~-----------------~l~~~~i----~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 173 --------------------------GQYTKTQ-----------------WLKKKNI----RIFYGDSDNDITAAREAGA 205 (237)
T ss_pred --------------------------CCCCHHH-----------------HHHhcCC----eEEEcCCHHHHHHHHHcCC
Confidence 1444322 3456665 8999999999999999999
Q ss_pred CEEEEcCC
Q 020675 316 PCVVMRSR 323 (323)
Q Consensus 316 ~~v~v~~g 323 (323)
++|.|.+|
T Consensus 206 ~~I~v~~G 213 (237)
T PRK11009 206 RGIRILRA 213 (237)
T ss_pred cEEEEecC
Confidence 99999875
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.7e-15 Score=122.51 Aligned_cols=89 Identities=8% Similarity=0.007 Sum_probs=73.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC-------CCccccceeechhhhhhhhhccccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg-------l~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
+++||+.++|+.|+++|++++|+||. +....+...++.++ +.++|+.++.+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~--~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~-------------------- 86 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYN--DDPHVAYELLKIFEDFGIIFPLAEYFDPLTIG-------------------- 86 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCC--CCHHHHHHHHHhccccccchhhHhhhhhhhhc--------------------
Confidence 48899999999999999999999994 15677888888888 67777753221
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChhhHHHHH
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg--v~p~~~v~VGDs~~Di~aA~ 311 (323)
..||+|++ |..+++++| +.|++|+||||+..|+...+
T Consensus 87 ---------------------------~~~pkp~~--------------~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 87 ---------------------------YWLPKSPR--------------LVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred ---------------------------CCCcHHHH--------------HHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 12788888 999999999 99999999999999988765
Q ss_pred H
Q 020675 312 R 312 (323)
Q Consensus 312 ~ 312 (323)
+
T Consensus 126 ~ 126 (128)
T TIGR01681 126 Y 126 (128)
T ss_pred h
Confidence 4
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.9e-15 Score=139.19 Aligned_cols=104 Identities=14% Similarity=0.209 Sum_probs=83.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCC---CC---------ChHHHHHHHHHcCCCccccceeech----hhhhhhhhc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYG---KS---------GDRIARSVVEKLGSERISKIKIVGN----EEVERSLYG 223 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~---~~---------~~~~~~~~l~~lgl~~~fd~~v~s~----~~~~~~~~~ 223 (323)
..++||+.++|+.|+++|++++|+||.+ .+ ....+..+++.+|+. |+.++++. ++.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~------ 100 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNC------ 100 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccC------
Confidence 5689999999999999999999999941 00 133456677888884 55444432 111
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
+.+||+|++ +..+++.++++|++++||||+
T Consensus 101 ------------------------------------~~rKP~p~~--------------l~~a~~~l~v~~~~svmIGDs 130 (354)
T PRK05446 101 ------------------------------------SCRKPKTGL--------------VEEYLAEGAIDLANSYVIGDR 130 (354)
T ss_pred ------------------------------------CCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCC
Confidence 235999999 899999999999999999999
Q ss_pred hhhHHHHHHcCCCEEEEc
Q 020675 304 QSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~ 321 (323)
.+|+++|+++||++|+|.
T Consensus 131 ~sDi~aAk~aGi~~I~v~ 148 (354)
T PRK05446 131 ETDVQLAENMGIKGIRYA 148 (354)
T ss_pred HHHHHHHHHCCCeEEEEE
Confidence 999999999999999985
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.2e-14 Score=126.01 Aligned_cols=163 Identities=15% Similarity=0.127 Sum_probs=101.1
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHH---HH---h-HHHHHHHHHhc
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL---FF---N-RKNALDEFLAS 157 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~-~~~~~~~~i~~ 157 (323)
+.++|||||||++. .|.+...+.|+.. ... .. ............ .. + ..+.+.+.+.
T Consensus 2 ~la~FDlD~TLi~~-------~w~~~~~~~g~~~----~~~---~~-~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~- 65 (203)
T TIGR02137 2 EIACLDLEGVLVPE-------IWIAFAEKTGIDA----LKA---TT-RDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA- 65 (203)
T ss_pred eEEEEeCCcccHHH-------HHHHHHHHcCCcH----HHH---Hh-cCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHH-
Confidence 46899999999964 3677777888641 111 11 110111111110 01 1 1234444443
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
.++++||+.++|+.|+++| +++|+|+ +....+..+++.+|++.+|...+...++. . +.|...
T Consensus 66 -~i~l~pga~ell~~lk~~~-~~~IVS~---~~~~~~~~il~~lgi~~~~an~l~~~~~g---~----~tG~~~------ 127 (203)
T TIGR02137 66 -TLKPLEGAVEFVDWLRERF-QVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSD---R----VVGYQL------ 127 (203)
T ss_pred -hCCCCccHHHHHHHHHhCC-eEEEEeC---ChHHHHHHHHHHcCCchhhceeeEEecCC---e----eECeee------
Confidence 3679999999999999975 9999999 67899999999999998887543322100 0 011100
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
..||++.. +...+++.|. ++++|||+.||+.+++.||+.+
T Consensus 128 -----------------------~~~~~K~~--------------~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~i 167 (203)
T TIGR02137 128 -----------------------RQKDPKRQ--------------SVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGI 167 (203)
T ss_pred -----------------------cCcchHHH--------------HHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCE
Confidence 00222222 2333355553 7999999999999999999998
Q ss_pred EEEc
Q 020675 318 VVMR 321 (323)
Q Consensus 318 v~v~ 321 (323)
++-.
T Consensus 168 a~~a 171 (203)
T TIGR02137 168 LFHA 171 (203)
T ss_pred EecC
Confidence 7643
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.1e-15 Score=125.52 Aligned_cols=83 Identities=13% Similarity=0.150 Sum_probs=72.3
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
+|+.|+++|++++|+|| .+...+...++.+|+..+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn---~~~~~~~~~l~~~gi~~~~~~~-------------------------------------- 74 (154)
T TIGR01670 36 GIRCALKSGIEVAIITG---RKAKLVEDRCKTLGITHLYQGQ-------------------------------------- 74 (154)
T ss_pred HHHHHHHCCCEEEEEEC---CCCHHHHHHHHHcCCCEEEecc--------------------------------------
Confidence 78999999999999999 5668889999999998877531
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
||+|++ +..+++++|+++++|+||||+.+|+.+++++|+. +.+.
T Consensus 75 --------------~~k~~~--------------~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~ 118 (154)
T TIGR01670 75 --------------SNKLIA--------------FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVA 118 (154)
T ss_pred --------------cchHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecC
Confidence 566666 8999999999999999999999999999999997 5554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.9e-15 Score=131.18 Aligned_cols=88 Identities=18% Similarity=0.271 Sum_probs=76.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc--cccceeechhhhhhhhhcccccccccccCcch
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~--~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
.+++|++.++|+.|+++|++++++|+ .....+..+.+.+|+.+ +|....
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~~~~v~a~~~-------------------------- 176 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIFDSIVFARVI-------------------------- 176 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSCSEEEEESHE--------------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeec---ccccccccccccccccccccccccc--------------------------
Confidence 46899999999999999999999998 67899999999999954 222110
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
.||+|.+ |..+++.+++++++|+||||+.||+.|+++||
T Consensus 177 ------------------------~kP~~k~--------------~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 ------------------------GKPEPKI--------------FLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ------------------------TTTHHHH--------------HHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ------------------------ccccchh--------------HHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 1888887 89999999999999999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=124.72 Aligned_cols=96 Identities=15% Similarity=0.253 Sum_probs=81.0
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCC-hHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~-~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
...++||+.++|+.|+++|++++|+||. . ...+..+++.+|+..++.
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~---~~~~~~~~~~~~~gl~~~~~----------------------------- 88 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNN---AGEQRAKAVEKALGIPVLPH----------------------------- 88 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCC---chHHHHHHHHHHcCCEEEcC-----------------------------
Confidence 3568999999999999999999999994 4 455666667776643211
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCC
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMP 316 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~ 316 (323)
..||+|++ |..+++++|+++++|+||||+. .|+.+|+++||.
T Consensus 89 -----------------------~~KP~p~~--------------~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 89 -----------------------AVKPPGCA--------------FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred -----------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 12999999 9999999999999999999998 799999999999
Q ss_pred EEEEcCC
Q 020675 317 CVVMRSR 323 (323)
Q Consensus 317 ~v~v~~g 323 (323)
+|+|.+|
T Consensus 132 ~i~v~~g 138 (170)
T TIGR01668 132 TILVEPL 138 (170)
T ss_pred EEEEccC
Confidence 9999875
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.9e-15 Score=137.44 Aligned_cols=48 Identities=17% Similarity=0.119 Sum_probs=45.6
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
.||+|.+ |+.+++++|++|++|+||||+. .||.+|+++||++|+|.||
T Consensus 201 gKP~p~~--------------~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G 249 (279)
T TIGR01452 201 GKPSPYM--------------FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSG 249 (279)
T ss_pred CCCCHHH--------------HHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCC
Confidence 4999999 9999999999999999999995 8999999999999999886
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-14 Score=124.99 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=73.2
Q ss_pred HHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhhH
Q 020675 170 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 249 (323)
Q Consensus 170 L~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~ 249 (323)
++.|+++|++++|+|| .....++..++.+|+..+|+..
T Consensus 43 ~~~L~~~Gi~laIiT~---k~~~~~~~~l~~lgi~~~f~~~--------------------------------------- 80 (169)
T TIGR02726 43 VIVLQLCGIDVAIITS---KKSGAVRHRAEELKIKRFHEGI--------------------------------------- 80 (169)
T ss_pred HHHHHHCCCEEEEEEC---CCcHHHHHHHHHCCCcEEEecC---------------------------------------
Confidence 5677888999999999 5679999999999999888731
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 250 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 250 ~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
||+|++ |+.+++++|+++++|++|||+.+|+.+++.+|+..++-
T Consensus 81 -------------kpkp~~--------------~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 81 -------------KKKTEP--------------YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG 124 (169)
T ss_pred -------------CCCHHH--------------HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence 778888 99999999999999999999999999999999987753
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-14 Score=119.95 Aligned_cols=89 Identities=19% Similarity=0.336 Sum_probs=77.5
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 243 (323)
|.+++.+.+++++|+++.|+|| +.+..+....+++|+.-++..
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~l~v~fi~~A---------------------------------- 91 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSN---NKESRVARAAEKLGVPFIYRA---------------------------------- 91 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhhcCCceeecc----------------------------------
Confidence 4555667889999999999999 678889999999998753332
Q ss_pred HHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEc
Q 020675 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 244 ~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~ 321 (323)
.||.+.. |++|++++++++++|+||||.. .||.+|+.+||++|+|.
T Consensus 92 ------------------~KP~~~~--------------fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 92 ------------------KKPFGRA--------------FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred ------------------cCccHHH--------------HHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEE
Confidence 3999988 9999999999999999999985 79999999999999985
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.1e-14 Score=131.70 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=78.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 241 (323)
.++++.+.++.|++.+++++++||.+ .......+..+|+..+|+.+. ....... +
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~---~~~~~~~~~~~g~g~~~~~i~-~~~~~~~-----------~---------- 175 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKG---RYYKRKDGLALDVGPFVTALE-YATDTKA-----------T---------- 175 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCC---CCCcCCCCCCCCchHHHHHHH-HHhCCCc-----------e----------
Confidence 36788889999998889999999943 333333444556666665421 1111000 0
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEE
Q 020675 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 320 (323)
Q Consensus 242 ~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v 320 (323)
...||+|++ |+.+++++|++|++++||||+. +|+.+|+++||.+|+|
T Consensus 176 ------------------~~gKP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 223 (257)
T TIGR01458 176 ------------------VVGKPSKTF--------------FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV 223 (257)
T ss_pred ------------------eecCCCHHH--------------HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 024999999 9999999999999999999996 8999999999999999
Q ss_pred cCC
Q 020675 321 RSR 323 (323)
Q Consensus 321 ~~g 323 (323)
.+|
T Consensus 224 ~~G 226 (257)
T TIGR01458 224 RTG 226 (257)
T ss_pred CCC
Confidence 875
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.3e-13 Score=124.82 Aligned_cols=41 Identities=10% Similarity=-0.005 Sum_probs=39.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
|+.+++++|+++++++||||+. +||.+|+++||++|+|.+|
T Consensus 236 ~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G 277 (311)
T PLN02645 236 MDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 277 (311)
T ss_pred HHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCC
Confidence 8999999999999999999997 8999999999999999876
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.7e-13 Score=121.66 Aligned_cols=49 Identities=8% Similarity=0.175 Sum_probs=45.1
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|++ |+.+++++++++++++||||+. +||.+|+++||++++|.+|
T Consensus 176 ~gKP~~~~--------------~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G 225 (249)
T TIGR01457 176 IGKPNAII--------------MEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTG 225 (249)
T ss_pred cCCChHHH--------------HHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCC
Confidence 45888887 8999999999999999999996 7999999999999999876
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.2e-13 Score=122.36 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=45.2
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.| |+.+++.++..+++++||||+. +||.+|+++||.+++|.+|
T Consensus 188 ~GKP~~~i--------------~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TG 237 (269)
T COG0647 188 IGKPSPAI--------------YEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTG 237 (269)
T ss_pred cCCCCHHH--------------HHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccC
Confidence 56777777 9999999999999999999996 6999999999999999987
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-12 Score=115.01 Aligned_cols=178 Identities=13% Similarity=0.059 Sum_probs=107.2
Q ss_pred CceEEEEecCCccccccccchHHHHHHHH-HHcCCCCCCCCHHHHHHHHcccCCcHHHH--------HHHHH-h------
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRM--------LVLFF-N------ 146 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~------ 146 (323)
..|+++||+||||++.. ...+|..++ +++|+.. .....+..+++.......+. ..... .
T Consensus 5 ~~k~~iFD~DGTL~~~d---~~~~~~~~~~~~~g~~~--~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD---MFGSFLRYLLRRQPLNL--LLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARL 79 (211)
T ss_pred cceEEEEecCCCCcccc---hHHHHHHHHHHhcchhh--HHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHH
Confidence 45799999999999544 457777777 7888652 22233333344322211110 00000 0
Q ss_pred --HHHHHHHHHhcCCCCCChhHHHHH-HHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhc
Q 020675 147 --RKNALDEFLASKDAPLRPGVEDFV-DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223 (323)
Q Consensus 147 --~~~~~~~~i~~~~~~l~pgv~elL-~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~ 223 (323)
..+.|.+..... ..++||+.++| +.++++|++++|+|| ++...++.+++.+|+.. .+. +++.+ ... .|+
T Consensus 80 ~~~~~~f~~~~~~~-~~~~pga~e~L~~~l~~~G~~l~IvSa---s~~~~~~~il~~l~~~~-~~~-~i~t~-l~~-~~t 151 (211)
T PRK11590 80 QALEADFVRWFRDN-VTAFPVVQERLTTYLLSSDADVWLITG---SPQPLVEQVYFDTPWLP-RVN-LIASQ-MQR-RYG 151 (211)
T ss_pred HHHHHHHHHHHHHh-CcCCccHHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHccccc-cCc-eEEEE-EEE-EEc
Confidence 012233322222 56799999999 578889999999999 67899999999999633 222 23332 111 233
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
+.+.|. ++. ..+| ...+.+.+|.+...+.+.|||
T Consensus 152 g~~~g~------~c~------------------------------------g~~K----~~~l~~~~~~~~~~~~aY~Ds 185 (211)
T PRK11590 152 GWVLTL------RCL------------------------------------GHEK----VAQLERKIGTPLRLYSGYSDS 185 (211)
T ss_pred cEECCc------cCC------------------------------------ChHH----HHHHHHHhCCCcceEEEecCC
Confidence 333221 111 1112 233445557777889999999
Q ss_pred hhhHHHHHHcCCCEEE
Q 020675 304 QSGVAGAQRIGMPCVV 319 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~ 319 (323)
.+|+.+...+|-+.+.
T Consensus 186 ~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 186 KQDNPLLYFCQHRWRV 201 (211)
T ss_pred cccHHHHHhCCCCEEE
Confidence 9999999999988664
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1e-11 Score=113.31 Aligned_cols=49 Identities=14% Similarity=0.186 Sum_probs=46.0
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|++ |+.+++++++++++|+||||+. +|+.+|+++|+.+++|.+|
T Consensus 172 ~gKP~~~~--------------~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G 221 (248)
T PRK10444 172 VGKPSPWI--------------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 221 (248)
T ss_pred cCCCCHHH--------------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCC
Confidence 35999999 9999999999999999999996 8999999999999999886
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.5e-11 Score=121.83 Aligned_cols=157 Identities=18% Similarity=0.175 Sum_probs=99.4
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLR 163 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~ 163 (323)
.+.++||+||||+.++.. .+.+...+++.-. ..+.-..-.. .+......... .. ..+....++++
T Consensus 10 ~~pl~~DlDgTLi~td~l--~e~~~~~l~~~p~-------~~~~l~~~~~-~g~a~lK~~~a----~~-~~~d~~~lp~~ 74 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLL--HESIFALLRRNPL-------ALLRLPLWLL-RGKAALKRRLA----RR-VDLDVATLPYN 74 (479)
T ss_pred CCCEEEeCCCCccccchH--HHHHHHHHHhChH-------HHHHHHHHHH-hcHHHHHHHHH----hh-cCCChhhCCCC
Confidence 347999999999999874 4555555543211 1111100000 11111111110 00 01223346788
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 243 (323)
||+.++|++++++|++++++|+ +.+..++.+++++|+ |+.+ +++++..+
T Consensus 75 pga~e~L~~lk~~G~~v~LaTa---s~~~~a~~i~~~lGl---Fd~V-igsd~~~~------------------------ 123 (479)
T PRK08238 75 EEVLDYLRAERAAGRKLVLATA---SDERLAQAVAAHLGL---FDGV-FASDGTTN------------------------ 123 (479)
T ss_pred hhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCC---CCEE-EeCCCccc------------------------
Confidence 9999999999999999999999 677999999999997 6654 55544322
Q ss_pred HHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 244 ~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
.||++.. +.+.+.++ .++++++||+.+|+.+++.+| +.+.|..
T Consensus 124 ------------------~kg~~K~---------------~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~ 166 (479)
T PRK08238 124 ------------------LKGAAKA---------------AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGA 166 (479)
T ss_pred ------------------cCCchHH---------------HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECC
Confidence 1444433 23345565 366899999999999999999 6666653
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.3e-12 Score=127.29 Aligned_cols=96 Identities=16% Similarity=0.208 Sum_probs=75.6
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCC---------ChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~---------~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
++||+.+.|+.|+++|++++|+||.+.- ....+..+++.+|+. |+.+ ++.++.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdvi-ia~~~~--------------- 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVF-IAIGAG--------------- 259 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEE-EeCCCC---------------
Confidence 6899999999999999999999995320 013477888899985 6653 443322
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCChhhHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg----v~p~~~v~VGDs~~Di~ 308 (323)
.++||+|.+ +..++++++ +++++++||||+..|++
T Consensus 260 ---------------------------~~RKP~pGm--------------~~~a~~~~~~~~~Id~~~S~~VGDaagr~~ 298 (526)
T TIGR01663 260 ---------------------------FYRKPLTGM--------------WDHLKEEANDGTEIQEDDCFFVGDAAGRPA 298 (526)
T ss_pred ---------------------------CCCCCCHHH--------------HHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence 135999999 999999985 89999999999999998
Q ss_pred HHHHcCCC
Q 020675 309 GAQRIGMP 316 (323)
Q Consensus 309 aA~~aG~~ 316 (323)
+|+++|-.
T Consensus 299 ~g~~ag~~ 306 (526)
T TIGR01663 299 NGKAAGKK 306 (526)
T ss_pred HHHhcCCC
Confidence 88877753
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.5e-12 Score=118.82 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=79.4
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH----cCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK----LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~----lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
++||+.++|+.|+++|+.++|+|+ +....+..+++. +++.++|+.+..+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~---n~~~~a~~~l~~~~~~~~~~~~f~~~~~~------------------------ 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASK---NDEDDAKKVFERRKDFILQAEDFDARSIN------------------------ 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHhCccccCcHHHeeEEEEe------------------------
Confidence 588999999999999999999999 677889999999 8999889864221
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
.||+|+. +..+++++|+.+++++||||+..|+.++++++-.
T Consensus 85 ------------------------~~pk~~~--------------i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ------------------------WGPKSES--------------LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ------------------------cCchHHH--------------HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 2888888 9999999999999999999999999999997653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-12 Score=110.01 Aligned_cols=94 Identities=21% Similarity=0.211 Sum_probs=78.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc-ccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~-fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
+.++||+.++|+.|+ ++++++|+|+ +....++.+++.+++..+ |+. +++.++...
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts---~~~~~~~~il~~l~~~~~~f~~-i~~~~d~~~------------------- 99 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTA---GLRMYADPVLDLLDPKKYFGYR-RLFRDECVF------------------- 99 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeC---CcHHHHHHHHHHhCcCCCEeee-EEECccccc-------------------
Confidence 568999999999998 5799999999 567899999999999654 465 466555533
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
.||+ + .++++++|++|++||+|||+..|+.+|+++|+.+
T Consensus 100 -----------------------~KP~--~---------------~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 100 -----------------------VKGK--Y---------------VKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred -----------------------cCCe--E---------------eecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 2775 3 5778999999999999999999999999999865
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-11 Score=104.13 Aligned_cols=114 Identities=17% Similarity=0.320 Sum_probs=77.6
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-------HHHHHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-------KNALDEFL 155 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i 155 (323)
..++|+||||.|++..+.. .++....|+. +.........+++...+......+ .....+++
T Consensus 15 ~~~aVcFDvDSTvi~eEgI------delA~~~G~~------~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v 82 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEGI------DELAAYCGVG------EAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFV 82 (227)
T ss_pred hcCeEEEecCcchhHHhhH------HHHHHHhCch------HHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHH
Confidence 3569999999999987664 4444445553 233333333444433332222111 33444455
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc--ccccee
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKI 211 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~--~fd~~v 211 (323)
......+.||++|++..|+++|..++++|+ ++...+..+.+.||++. .|...+
T Consensus 83 ~~~k~~lT~Gi~eLv~~L~~~~~~v~liSG---GF~~~i~~Va~~Lgi~~~n~yAN~l 137 (227)
T KOG1615|consen 83 IKQKPTLTPGIRELVSRLHARGTQVYLISG---GFRQLIEPVAEQLGIPKSNIYANEL 137 (227)
T ss_pred hcCCCccCCCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHhCCcHhhhhhhee
Confidence 555678999999999999999999999999 89999999999999986 554443
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.30 E-value=5e-11 Score=108.00 Aligned_cols=41 Identities=12% Similarity=0.271 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcE-EEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNC-FLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~-v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
|+.++++++++++++ +||||+. +||.+|+++||++|+|.+|
T Consensus 194 ~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 194 YRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred HHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 899999999999987 9999998 7999999999999999986
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.6e-11 Score=107.47 Aligned_cols=51 Identities=8% Similarity=-0.046 Sum_probs=46.5
Q ss_pred hhcCCCccc--cCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 260 SMLKLSVDI--DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 260 ~~~KP~p~i--~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.||+|++ |. ++.+++++|+.|++|+||+|...++++|++.||.++.+.+
T Consensus 154 gl~KPdp~iK~yH------------le~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 154 GLDAPMPLDKSYH------------LKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred cccCCCccchHHH------------HHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 567999999 33 4999999999999999999999999999999999999875
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.3e-11 Score=107.91 Aligned_cols=121 Identities=24% Similarity=0.277 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
.+...+.+....+.++||+.++++.|+++|++++|+|+ +....++.+++.+|+...+.. ++++.-.. .
T Consensus 108 ~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~vL~~lgl~~~~~~-IvSN~L~f--------~ 175 (277)
T TIGR01544 108 KAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEVLRQAGVYHPNVK-VVSNFMDF--------D 175 (277)
T ss_pred HHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHHcCCCCcCce-EEeeeEEE--------C
Confidence 44555555555789999999999999999999999999 778999999999998765543 33332110 1
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChh
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQS 305 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg--v~p~~~v~VGDs~~ 305 (323)
.+++..| ||.|-+.. -.+...+ ++.++++++ +++++||+||||.+
T Consensus 176 ~dGvltG----------------------------~~~P~i~~---~~K~~~v--~~~~~~~~~~~~~~~~vI~vGDs~~ 222 (277)
T TIGR01544 176 EDGVLKG----------------------------FKGPLIHT---FNKNHDV--ALRNTEYFNQLKDRSNIILLGDSQG 222 (277)
T ss_pred CCCeEeC----------------------------CCCCcccc---cccHHHH--HHHHHHHhCccCCcceEEEECcChh
Confidence 1222222 66664421 1222222 667888998 89999999999999
Q ss_pred hHHHHHHc
Q 020675 306 GVAGAQRI 313 (323)
Q Consensus 306 Di~aA~~a 313 (323)
|+.||..+
T Consensus 223 Dl~ma~g~ 230 (277)
T TIGR01544 223 DLRMADGV 230 (277)
T ss_pred hhhHhcCC
Confidence 99998766
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.3e-11 Score=104.28 Aligned_cols=101 Identities=14% Similarity=0.247 Sum_probs=70.2
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC----------ccccceeechhhhhhhhhcccccc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE----------RISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~----------~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
.+.++|++.++|+.|+++|++++++|-+ .....++.+|+.+++. ++|+..-+....
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt--~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gs------------ 108 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRT--DEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGS------------ 108 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE----S-HHHHHHHHHHTT-C----------CCECEEEESSS-------------
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECC--CChHHHHHHHHhcCCCccccccccchhhcchhheecCc------------
Confidence 4779999999999999999999999953 3468999999999999 666653222110
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
+.+ -|+.+.+..|++.++++||+|-..++.
T Consensus 109 -----------------------------------------------K~~---Hf~~i~~~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 109 -----------------------------------------------KTT---HFRRIHRKTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp -----------------------------------------------HHH---HHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred -----------------------------------------------hHH---HHHHHHHhcCCChhHEEEecCchhcce
Confidence 000 188889999999999999999999999
Q ss_pred HHHHcCCCEEEEcCC
Q 020675 309 GAQRIGMPCVVMRSR 323 (323)
Q Consensus 309 aA~~aG~~~v~v~~g 323 (323)
...+.|+.+|.|.+|
T Consensus 139 ~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 139 VVSKLGVTCVLVPDG 153 (169)
T ss_dssp HHHTTT-EEEE-SSS
T ss_pred eeEecCcEEEEeCCC
Confidence 999999999999876
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.1e-10 Score=100.87 Aligned_cols=179 Identities=17% Similarity=0.242 Sum_probs=104.6
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH----HHHHHHHHhH---HHHHHHHHhcC
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE----DRMLVLFFNR---KNALDEFLASK 158 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~i~~~ 158 (323)
.|+||||+||+|.... ..+++.++.. .+..+. ...... +.. .+++..+... .+...+.+ .
T Consensus 2 LvvfDFD~TIvd~dsd------~~v~~~l~~~--~~~~~l-~~~~~~--~~wt~~m~~vl~~L~~~gvt~~~I~~~l--~ 68 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD------DWVIELLPPE--ELPEEL-RESYPK--GGWTEYMDRVLQLLHEQGVTPEDIRDAL--R 68 (234)
T ss_pred EEEEeCCCCccCCccH------HHHHHhcCCc--ccHHHH-HHhccc--cchHHHHHHHHHHHHHcCCCHHHHHHHH--H
Confidence 5899999999998875 3445555554 132222 222221 111 1222222111 23344433 3
Q ss_pred CCCCChhHHHHHHHH--HHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcc
Q 020675 159 DAPLRPGVEDFVDDA--YNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 159 ~~~l~pgv~elL~~L--k~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
.+++.||+.++++.+ ++.|+.+.|+|+ ++...++.+|+..|+...|+.+ +++...... .|.-.. .
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~gl~~~f~~I-~TNpa~~~~------~G~l~v---~ 135 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHHGLRDCFSEI-FTNPACFDA------DGRLRV---R 135 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhCCCccccceE-EeCCceecC------CceEEE---e
Confidence 588999999999999 457999999999 7889999999999999999874 444211100 000000 0
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCc--hhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPE--SLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~--~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
|+ -++ .. ...|. =+-+++..|..-..+-|+..++++||||+.+|+-.+.+.+
T Consensus 136 py------------------------h~h-~C-~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 136 PY------------------------HSH-GC-SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred Cc------------------------cCC-CC-CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccC
Confidence 00 000 00 00011 1233333233333335788999999999999999988766
Q ss_pred CC
Q 020675 315 MP 316 (323)
Q Consensus 315 ~~ 316 (323)
-.
T Consensus 190 ~~ 191 (234)
T PF06888_consen 190 PR 191 (234)
T ss_pred CC
Confidence 53
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.2e-11 Score=90.59 Aligned_cols=49 Identities=14% Similarity=0.259 Sum_probs=46.7
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~v~v~~g 323 (323)
++||+|.+ |+.+++++++++++++||||+ ..||.+|+++||.+|+|.+|
T Consensus 2 ~gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG 51 (75)
T PF13242_consen 2 CGKPSPGM--------------LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTG 51 (75)
T ss_dssp CSTTSHHH--------------HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSS
T ss_pred CCCCcHHH--------------HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCC
Confidence 46999999 999999999999999999999 89999999999999999986
|
... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-10 Score=105.92 Aligned_cols=37 Identities=11% Similarity=0.130 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 204 l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam 240 (272)
T PRK10530 204 LTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM 240 (272)
T ss_pred HHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe
Confidence 7889999999999999999999999999999986543
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.3e-10 Score=96.53 Aligned_cols=110 Identities=14% Similarity=0.157 Sum_probs=79.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCC------------hHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~------------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.+.||+.+.+..|++.|++++|+||.+.=. .......++..|. -|+.+.++.
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cp------------- 94 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCP------------- 94 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECC-------------
Confidence 3478899999999999999999999943100 0222233333343 233332221
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
|.. +..+.++||.|.+ ++.+++++++++++.++|||...|+
T Consensus 95 --------h~p-----------------~~~c~cRKP~~gm--------------~~~~~~~~~iD~~~s~~VGD~~~Dl 135 (181)
T COG0241 95 --------HHP-----------------EDNCDCRKPKPGM--------------LLSALKEYNIDLSRSYVVGDRLTDL 135 (181)
T ss_pred --------CCC-----------------CCCCcccCCChHH--------------HHHHHHHhCCCccceEEecCcHHHH
Confidence 110 0013578999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
++|.++|++.+.+.++
T Consensus 136 q~a~n~gi~~~~~~~~ 151 (181)
T COG0241 136 QAAENAGIKGVLVLTG 151 (181)
T ss_pred HHHHHCCCCceEEEcC
Confidence 9999999998887654
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.2e-11 Score=108.16 Aligned_cols=100 Identities=12% Similarity=0.195 Sum_probs=74.2
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccccee-echhhhhhhhhcccccccccccCcchhHHH
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI-VGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v-~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 241 (323)
++++.++++.|+++|+++ |+||. ........+..++...+|..+. ++.+..
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~---d~~~~~~~~~~~~~g~~~~~i~~~g~~~~------------------------ 191 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANP---DRGINQHGIYRYGAGYYAELIKQLGGKVI------------------------ 191 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECC---CEeccCCCceEecccHHHHHHHHhCCcEe------------------------
Confidence 689999999998899997 88994 3344444445555555554310 111110
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCC-hhhHHHHHHcCCCEEE
Q 020675 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGS-QSGVAGAQRIGMPCVV 319 (323)
Q Consensus 242 ~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~v~VGDs-~~Di~aA~~aG~~~v~ 319 (323)
...||+|++ |+.+++++|+. +++|+||||+ .+||.+|+++||.+++
T Consensus 192 ------------------~~gKP~~~~--------------~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~ 239 (242)
T TIGR01459 192 ------------------YSGKPYPAI--------------FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTAL 239 (242)
T ss_pred ------------------cCCCCCHHH--------------HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEE
Confidence 134999999 99999999975 6799999999 5999999999999999
Q ss_pred EcC
Q 020675 320 MRS 322 (323)
Q Consensus 320 v~~ 322 (323)
|.+
T Consensus 240 v~t 242 (242)
T TIGR01459 240 VLT 242 (242)
T ss_pred EeC
Confidence 975
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.6e-10 Score=101.01 Aligned_cols=51 Identities=14% Similarity=0.268 Sum_probs=41.4
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f 207 (323)
....+++||+.++|+.|+++|++++++||........+...++++|+...+
T Consensus 114 ~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~ 164 (266)
T TIGR01533 114 AAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD 164 (266)
T ss_pred cCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC
Confidence 345779999999999999999999999996543345566788899997654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.3e-10 Score=98.71 Aligned_cols=81 Identities=10% Similarity=0.108 Sum_probs=67.7
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
.++.|+++|++++|+|| .....+..+++.+|+..+|+. .
T Consensus 56 ~i~~L~~~Gi~v~I~T~---~~~~~v~~~l~~lgl~~~f~g----~---------------------------------- 94 (183)
T PRK09484 56 GIRCLLTSGIEVAIITG---RKSKLVEDRMTTLGITHLYQG----Q---------------------------------- 94 (183)
T ss_pred HHHHHHHCCCEEEEEeC---CCcHHHHHHHHHcCCceeecC----C----------------------------------
Confidence 45667789999999999 567888999999999877652 1
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.++. ++.+++++|+++++|+||||+.+|+.+|+++|+.++
T Consensus 95 --------------~~k~~~--------------l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 95 --------------SNKLIA--------------FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred --------------CcHHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 222333 899999999999999999999999999999999854
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.2e-09 Score=93.80 Aligned_cols=106 Identities=11% Similarity=0.011 Sum_probs=70.4
Q ss_pred CCCChhHHHHHH-HHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh-hhhhhhhcccccccccccCcch
Q 020675 160 APLRPGVEDFVD-DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 160 ~~l~pgv~elL~-~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~-~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
..++||+.+.|+ .++++|++++|+|| +++..++.+.+..++....+ +++.+ ++.. | +...|.++
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSa---s~~~~~~~ia~~~~~~~~~~--~i~t~le~~~--------g-g~~~g~~c 158 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITG---SPQPLVEAVYFDSNFIHRLN--LIASQIERGN--------G-GWVLPLRC 158 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcC---CcHHHHHHHHHhccccccCc--EEEEEeEEeC--------C-ceEcCccC
Confidence 358999999996 78889999999999 67888999998866643222 23332 1111 1 11122222
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
. ..+| ...+.+.+|.+.+.+.+.|||.+|+.+...+|-+.
T Consensus 159 ~------------------------------------g~~K----v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~ 198 (210)
T TIGR01545 159 L------------------------------------GHEK----VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRW 198 (210)
T ss_pred C------------------------------------ChHH----HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcE
Confidence 1 1112 12333445656678899999999999999999886
Q ss_pred EE
Q 020675 318 VV 319 (323)
Q Consensus 318 v~ 319 (323)
+.
T Consensus 199 ~V 200 (210)
T TIGR01545 199 RV 200 (210)
T ss_pred EE
Confidence 64
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.6e-10 Score=95.40 Aligned_cols=49 Identities=18% Similarity=0.219 Sum_probs=45.9
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh-hHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~-Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.. |+.+++.+|++|+++|||||..+ |+-+|+++||+.|.|.+|
T Consensus 179 vGKP~~~f--------------Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG 228 (262)
T KOG3040|consen 179 VGKPSPFF--------------FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG 228 (262)
T ss_pred ecCCCHHH--------------HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence 67899888 99999999999999999999875 899999999999999986
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.02 E-value=6.7e-10 Score=94.69 Aligned_cols=98 Identities=14% Similarity=0.235 Sum_probs=65.4
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCCh-----------HHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-----------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~-----------~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+.|++.+.|+.|.+.||.++|+||.+.-.. ..+..+++.+++.- .. +++....
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~--~~-~~a~~~d------------- 93 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPI--QV-YAAPHKD------------- 93 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-E--EE-EECGCSS-------------
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCce--EE-EecCCCC-------------
Confidence 445899999999999999999999642111 33445566666651 11 1221110
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCC----CCCcEEEEcCC---
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----PVRNCFLIAGS--- 303 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv----~p~~~v~VGDs--- 303 (323)
.++||.|.| ++.+++.++. +.++++||||.
T Consensus 94 -----------------------------~~RKP~~GM--------------~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 94 -----------------------------PCRKPNPGM--------------WEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp -----------------------------TTSTTSSHH--------------HHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred -----------------------------CCCCCchhH--------------HHHHHHhccccccccccceEEEeccCCC
Confidence 256999999 8999988874 89999999995
Q ss_pred --------hhhHHHHHHcCCCEE
Q 020675 304 --------QSGVAGAQRIGMPCV 318 (323)
Q Consensus 304 --------~~Di~aA~~aG~~~v 318 (323)
..|.+-|.++|++..
T Consensus 131 ~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 131 SKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TB-S--S--HHHHHHHHHT--EE
T ss_pred CCcccccChhHHHHHHHcCCccc
Confidence 579999999999853
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.4e-09 Score=88.97 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=35.3
Q ss_pred HHHHHHHcCC-----CCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv-----~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
++.+++.++. .|+++++|||.. +||.+|...|+.+|+|..|
T Consensus 120 ~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 120 FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred HHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 5667777764 499999999995 7999999999999999875
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.1e-08 Score=96.93 Aligned_cols=49 Identities=14% Similarity=0.242 Sum_probs=42.3
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHc--------CC-----CCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYA--------EK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~l--------gv-----~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.+ |+.+++.+ ++ ++++++||||+. +||.+|+++||.+|+|.+|
T Consensus 231 ~GKP~~~~--------------~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG 293 (321)
T TIGR01456 231 LGKPTKLT--------------YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTG 293 (321)
T ss_pred cCCCChHH--------------HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEeccc
Confidence 47888888 88888777 43 457999999997 8999999999999999886
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.93 E-value=6e-09 Score=98.84 Aligned_cols=124 Identities=14% Similarity=0.133 Sum_probs=85.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc-C-------CCccccceeechhhhhhhhhccccccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------SERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l-g-------l~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
+.+.||+.++|+.|+++|++++|+|| +....+..+++.+ | +.++||.++.++ .. ...|+..-+-..+
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTN---S~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a-~K-P~FF~~~~pf~~v 257 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTN---SDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDA-RK-PGFFTEGRPFRQV 257 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhhCCcccccchHhhCcEEEeCC-CC-CcccCCCCceEEE
Confidence 55799999999999999999999999 6779999999996 7 899999764433 21 2223211110000
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCc-------cccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSV-------DIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 304 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p-------~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~ 304 (323)
++.. +..|+.. .+|.+.. .....+.+|+.+++++||||..
T Consensus 258 ----~~~~--------------------g~~~~~~~~~l~~g~vY~gGn---------~~~~~~~l~~~~~~vlYvGD~i 304 (343)
T TIGR02244 258 ----DVET--------------------GSLKWGEVDGLEPGKVYSGGS---------LKQFHELLKWRGKEVLYFGDHI 304 (343)
T ss_pred ----eCCC--------------------CcccCCccccccCCCeEeCCC---------HHHHHHHHCCCCCcEEEECCcc
Confidence 0000 0001111 1222111 5677888999999999999996
Q ss_pred -hhHHHHH-HcCCCEEEEc
Q 020675 305 -SGVAGAQ-RIGMPCVVMR 321 (323)
Q Consensus 305 -~Di~aA~-~aG~~~v~v~ 321 (323)
.||.+|+ .+||.+|+|.
T Consensus 305 ~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 305 YGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred hHHHHhhHHhcCcEEEEEc
Confidence 6999998 9999999885
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=87.14 Aligned_cols=100 Identities=11% Similarity=0.103 Sum_probs=70.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH---cCCCccccceeechhhhhhhhhcccccccccccCcc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK---LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~---lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
.+++|++.+.|++-++.|+++.|.|+. ........+.. .++..+|+.. |++.. |.
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSG---SV~AQkL~Fghs~agdL~~lfsGy-----------fDtti-G~------- 159 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSG---SVKAQKLFFGHSDAGDLNSLFSGY-----------FDTTI-GK------- 159 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCC---CchhHHHhhcccccccHHhhhcce-----------eeccc-cc-------
Confidence 569999999999999999999999994 33433333322 2233333221 11100 00
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
|-...- |.+++...|++|.+++|+.|.+..+.||+.+||+
T Consensus 160 --------------------------KrE~~S--------------Y~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~ 199 (229)
T COG4229 160 --------------------------KRESQS--------------YAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLA 199 (229)
T ss_pred --------------------------cccchh--------------HHHHHHhcCCCchheEEecCCHHHHHHHHhcchh
Confidence 111122 8999999999999999999999999999999999
Q ss_pred EEEEc
Q 020675 317 CVVMR 321 (323)
Q Consensus 317 ~v~v~ 321 (323)
++++.
T Consensus 200 t~l~~ 204 (229)
T COG4229 200 TGLAV 204 (229)
T ss_pred eeeee
Confidence 98764
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.8e-08 Score=87.25 Aligned_cols=40 Identities=23% Similarity=0.536 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
|++.++|+.++++|++++|+|+ ++...++.+++.+|+...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~---~~~~~i~~~~~~~~i~~~ 131 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSG---SPDEIIEPIAERLGIDDD 131 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEE---EEHHHHHHHHHHTTSSEG
T ss_pred hhHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCce
Confidence 6666999999999999999999 788999999999999863
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.8e-09 Score=92.58 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 162 l~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam 198 (230)
T PRK01158 162 LKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV 198 (230)
T ss_pred HHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe
Confidence 7889999999999999999999999999999998765
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.2e-08 Score=87.44 Aligned_cols=37 Identities=11% Similarity=0.049 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 154 i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam 190 (225)
T TIGR01482 154 VKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV 190 (225)
T ss_pred HHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc
Confidence 7889999999999999999999999999999998654
|
catalyze the same reaction as SPP. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.5e-08 Score=88.76 Aligned_cols=49 Identities=10% Similarity=0.029 Sum_probs=44.5
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||++.+ ++.++++++++|++|+||||+. +||.-+++.|+++++|.+|
T Consensus 222 ~GKP~~~m--------------~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltG 271 (306)
T KOG2882|consen 222 LGKPSTFM--------------FEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSG 271 (306)
T ss_pred cCCCCHHH--------------HHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecC
Confidence 56777777 8999999999999999999997 5999999999999999886
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.4e-07 Score=80.45 Aligned_cols=111 Identities=16% Similarity=0.303 Sum_probs=71.0
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccC-CcH----HHHHHHHHhH---HHHHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA-GDE----DRMLVLFFNR---KNALDEF 154 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~---~~~~~~~ 154 (323)
+-..++||||-||+|.... +.+.+.++.. +...++..... +.. .++......+ .+.....
T Consensus 12 ~ril~~FDFD~TIid~dSD------~wVv~~lp~~------~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~ 79 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD------NWVVDELPTT------DLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQV 79 (256)
T ss_pred CcEEEEEecCceeecCCcc------hHHHHhcccc------hhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 3448889999999998875 3344444443 11111111111 111 1111111111 2233332
Q ss_pred HhcCCCCCChhHHHHHHHHHHCCC-cEEEEcCCCCCChHHHHHHHHHcCCCccccce
Q 020675 155 LASKDAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIK 210 (323)
Q Consensus 155 i~~~~~~l~pgv~elL~~Lk~~Gi-~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~ 210 (323)
+ ..++..||+.++++.+++.|. .+.|+|. .+...++.+++.+|+.++|..+
T Consensus 80 ~--r~iP~~Pgmv~lik~~ak~g~~eliIVSD---aNsfFIe~~Lea~~~~d~F~~I 131 (256)
T KOG3120|consen 80 L--RSIPIVPGMVRLIKSAAKLGCFELIIVSD---ANSFFIEEILEAAGIHDLFSEI 131 (256)
T ss_pred H--hcCCCCccHHHHHHHHHhCCCceEEEEec---CchhHHHHHHHHccHHHHHHHH
Confidence 2 358899999999999999985 9999999 5789999999999999999853
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.4e-08 Score=91.29 Aligned_cols=37 Identities=14% Similarity=0.106 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p-~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|+++ +++++|||+.||+.|++.+|+.+++
T Consensus 195 l~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam 232 (273)
T PRK00192 195 VRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV 232 (273)
T ss_pred HHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe
Confidence 788899999999 9999999999999999999998776
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.8e-09 Score=86.07 Aligned_cols=80 Identities=11% Similarity=0.188 Sum_probs=65.9
Q ss_pred HHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhhH
Q 020675 170 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 249 (323)
Q Consensus 170 L~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~ 249 (323)
|+.|.+.|++++|+|+ .....++...+.||+..+|... .+.
T Consensus 44 ik~l~~~Gi~vAIITG---r~s~ive~Ra~~LGI~~~~qG~----~dK-------------------------------- 84 (170)
T COG1778 44 IKLLLKSGIKVAIITG---RDSPIVEKRAKDLGIKHLYQGI----SDK-------------------------------- 84 (170)
T ss_pred HHHHHHcCCeEEEEeC---CCCHHHHHHHHHcCCceeeech----HhH--------------------------------
Confidence 4566778999999999 4568899999999998766531 111
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 250 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 250 ~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.++|+.+++++++.+++|.||||-.+|+...+++|+.++
T Consensus 85 ------------------------------~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 85 ------------------------------LAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred ------------------------------HHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 123899999999999999999999999999999999865
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.3e-07 Score=79.29 Aligned_cols=119 Identities=24% Similarity=0.396 Sum_probs=71.2
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH---HHHHHHHHhHHHHHHHHHhcCCCCC
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE---DRMLVLFFNRKNALDEFLASKDAPL 162 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~l 162 (323)
.|+-|+|||++-.+.. ..+...+|.+ +|. ..+...+.....-. .+|+.....-.++..+.+.. .+.+
T Consensus 5 vi~sDFDGTITl~Ds~------~~itdtf~~~--e~k-~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk-~i~I 74 (220)
T COG4359 5 VIFSDFDGTITLNDSN------DYITDTFGPG--EWK-ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLK-DIKI 74 (220)
T ss_pred EEEecCCCceEecchh------HHHHhccCch--HHH-HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHh-hccc
Confidence 6778999999854432 4445556665 242 44444433222111 11211111112333344433 3779
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC-CCccccceeechhhh
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEV 217 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg-l~~~fd~~v~s~~~~ 217 (323)
.||.+++++.+++++++++|+|+ +-...+..+++..+ -+......+++.+..
T Consensus 75 dp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~ivgke~i~~idi~sn~~~ 127 (220)
T COG4359 75 DPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIVGKERIYCIDIVSNNDY 127 (220)
T ss_pred CccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhccccceeeeEEeecCce
Confidence 99999999999999999999999 55788888888754 444444445555443
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.8e-08 Score=91.65 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhh
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~ 219 (323)
||+.++|++|+++|++++|+|| +....+...++.+|++.+|+.+ +++++...
T Consensus 149 PgV~EaL~~LkekGikLaIaTS---~~Re~v~~~L~~lGLd~YFdvI-Is~Gdv~~ 200 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSY---GDRDHVVESMRKVKLDRYFDII-ISGGHKAE 200 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHcCCCcccCEE-EECCcccc
Confidence 7999999999999999999999 5678888999999999999874 55544433
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-07 Score=84.44 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 152 i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 152 VEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 7889999999999999999999999999999998765
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.9e-07 Score=82.07 Aligned_cols=37 Identities=5% Similarity=-0.031 Sum_probs=34.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 184 l~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 6888999999999999999999999999999988664
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.9e-08 Score=98.53 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=69.2
Q ss_pred CCCChhHHHHHHHHHHCC-CcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~G-i~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
.+++||+.++|+.|+++| ++++++|| .+...++.+++.+|++++|... ..++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi~~~f~~~--~p~~---------------------- 435 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGIDEVHAEL--LPED---------------------- 435 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCCCeeeccC--CHHH----------------------
Confidence 468999999999999999 99999999 6788999999999998877642 1000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
| ..++++++..+++|+||||+.+|+.++++||+.+.
T Consensus 436 ------------------------K--------------------~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia 471 (556)
T TIGR01525 436 ------------------------K--------------------LAIVKELQEEGGVVAMVGDGINDAPALAAADVGIA 471 (556)
T ss_pred ------------------------H--------------------HHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEE
Confidence 1 01233344467799999999999999999995443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.8e-08 Score=97.65 Aligned_cols=87 Identities=11% Similarity=0.124 Sum_probs=70.3
Q ss_pred CCCChhHHHHHHHHHHCCC-cEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi-~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
.+++||+.++|+.|+++|+ +++++|| .+...++.+++.+|++++|...
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~---------------------------- 409 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAEL---------------------------- 409 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhcc----------------------------
Confidence 4689999999999999999 9999999 6789999999999998877632
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
.|.+ + ..++++++.+.++++||||+.+|+.++++||+..
T Consensus 410 ------------------------~p~~---------K-------~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 410 ------------------------LPED---------K-------LEIVKELREKYGPVAMVGDGINDAPALAAADVGI 448 (536)
T ss_pred ------------------------CcHH---------H-------HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEE
Confidence 1110 0 1234555556689999999999999999999743
|
. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-07 Score=87.66 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 229 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM 229 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec
Confidence 47899999999999999999999999999999987664
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.2e-07 Score=84.33 Aligned_cols=93 Identities=9% Similarity=0.158 Sum_probs=67.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++||+.++|+.|+++|++++++||+++. .......++.+|+.. +|+.+ +++++....
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~-~~~~~~~L~~~gl~~~~~~~I-i~s~~~~~~------------------ 82 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRN-IFSLHKTLKSLGINADLPEMI-ISSGEIAVQ------------------ 82 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCC-hHHHHHHHHHCCCCccccceE-EccHHHHHH------------------
Confidence 347999999999999999999999996431 122236889999987 88874 555443221
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
. +..+++++++.++++++|||+..|++.....|.
T Consensus 83 -----------------------------~--------------l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 83 -----------------------------M--------------ILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----------------------------H--------------HHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 0 555667778888888888888877776655554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.2e-07 Score=85.13 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 194 l~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam 230 (264)
T COG0561 194 LQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM 230 (264)
T ss_pred HHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec
Confidence 7888999999999999999999999999999998765
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.6e-07 Score=86.20 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||++|.+.+|+.+++
T Consensus 200 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 237 (270)
T PRK10513 200 GVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM 237 (270)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe
Confidence 37899999999999999999999999999999997665
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.4e-07 Score=94.21 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=38.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.+++||+.++|+.|+++|++++++|+ .+...++.+.+.+|++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSg---d~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTG---DNRKTAKAVAKELGIN 445 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCc
Confidence 45899999999999999999999999 6789999999999996
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.3e-07 Score=81.75 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||+.|.+.+|+.+++
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm 231 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM 231 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee
Confidence 47899999999999999999999999999999998765
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=8.8e-08 Score=81.88 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=77.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
+..+||+.++|+.|.+. +.++|.|+ +...+++.+++.++... +|+..+ +.++...
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts---~~~~yA~~il~~ldp~~~~f~~~l-~r~~~~~------------------- 96 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTA---SLEEYADPVLDILDRGGKVISRRL-YRESCVF------------------- 96 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcC---CcHHHHHHHHHHHCcCCCEEeEEE-EccccEE-------------------
Confidence 56899999999999987 99999999 66899999999999876 787653 3332211
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.||. |.+.++.+|.+++++|+|||+..|+.++.++|+.+.
T Consensus 97 -----------------------~~~~-----------------~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 -----------------------TNGK-----------------YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred -----------------------eCCC-----------------EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 1222 245678899999999999999999999999998865
Q ss_pred EE
Q 020675 319 VM 320 (323)
Q Consensus 319 ~v 320 (323)
..
T Consensus 137 ~f 138 (162)
T TIGR02251 137 SW 138 (162)
T ss_pred CC
Confidence 43
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=7.5e-07 Score=72.10 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=44.2
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccccee
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 211 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v 211 (323)
.+.++|.+++++..+++.|+-+..+|= +....+-..+..+++..||+..+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sW---N~~~kA~~aLral~~~~yFhy~V 88 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASW---NFEDKAIKALRALDLLQYFHYIV 88 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeec---CchHHHHHHHHHhchhhhEEEEE
Confidence 366999999999999999999999986 56788888999999999999764
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=9.3e-07 Score=81.77 Aligned_cols=49 Identities=16% Similarity=0.147 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhh
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 216 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~ 216 (323)
|++.++|++|+++|++++|+|| +....+...++.+|+..+|+.+ +++++
T Consensus 151 p~V~EtL~eLkekGikLaIvTN---g~Re~v~~~Le~lgL~~yFDvI-I~~g~ 199 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSY---GNREHVVHSLKETKLEGYFDII-ICGGR 199 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHHcCCCccccEE-EECCC
Confidence 7899999999999999999999 5678899999999999999875 44433
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.39 E-value=8.1e-07 Score=80.18 Aligned_cols=54 Identities=24% Similarity=0.349 Sum_probs=43.6
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 153 ~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
+.+.....++.||+.+|++.++++|+.|.++||........+..-|...|+...
T Consensus 107 ~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~ 160 (229)
T PF03767_consen 107 EWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW 160 (229)
T ss_dssp HHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB
T ss_pred HHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc
Confidence 333444457999999999999999999999999776666777888888997643
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.9e-07 Score=93.36 Aligned_cols=38 Identities=5% Similarity=0.016 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||++|.+.+|+.+++
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM 548 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL 548 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe
Confidence 37899999999999999999999999999999997665
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.7e-07 Score=82.08 Aligned_cols=29 Identities=21% Similarity=0.427 Sum_probs=22.5
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCC
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYG 187 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~ 187 (323)
.++|.||+.|+|+.|.+.|+.+.++|.+.
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~ 99 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARP 99 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecC
Confidence 47899999999999999998888888754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.9e-06 Score=76.28 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=41.6
Q ss_pred HHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 154 ~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
.+.....++.|++.++++.|+++|+++.++|+.+......+...|...|+..+
T Consensus 113 wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~ 165 (229)
T TIGR01675 113 WLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW 165 (229)
T ss_pred HHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence 34455678999999999999999999999999653233446677888888764
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.33 E-value=7.4e-07 Score=81.30 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++.+|++++++++|||+.||+.|++.+|+.+++
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~ 229 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM 229 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe
Confidence 37889999999999999999999999999999998765
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.32 E-value=1e-05 Score=72.82 Aligned_cols=36 Identities=3% Similarity=0.017 Sum_probs=30.8
Q ss_pred HHHHHHHcCC--CCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv--~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.+..++.+++ +++++++|||+.||+.|.+.+|+.++
T Consensus 186 l~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 186 IKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred HHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 5666777765 77799999999999999999999865
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.3e-06 Score=92.85 Aligned_cols=88 Identities=11% Similarity=0.188 Sum_probs=70.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++||+.+.|+.|++.|++++++|+ .....++.+.+.+|++++|....
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~~----------------------------- 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGVL----------------------------- 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCCC-----------------------------
Confidence 6899999999999999999999999 56788999999999987665310
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
| ++ -..++++++..+++++||||+.||+.++++||+...+
T Consensus 698 -----------------------p---------~~-------K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 698 -----------------------P---------DG-------KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred -----------------------H---------HH-------HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 0 00 0134556666788999999999999999999995543
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.2e-06 Score=80.96 Aligned_cols=38 Identities=8% Similarity=-0.046 Sum_probs=35.3
Q ss_pred HHHHHHHHcCC---CCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEK---PVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv---~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|+ ++++++.|||+.||+.|-+.+|..+++
T Consensus 191 al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM 231 (271)
T PRK03669 191 AANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV 231 (271)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe
Confidence 37899999999 999999999999999999999998776
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.3e-06 Score=70.07 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=28.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
..|++.++++.++++|++++++|++..+....++..++.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 358999999999999999999999542222223466666
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.6e-05 Score=71.44 Aligned_cols=113 Identities=17% Similarity=0.314 Sum_probs=72.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh------------hhhhhhhcccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE------------EVERSLYGQFVLG 228 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~------------~~~~~~~~~~~~g 228 (323)
..-+.+.++++.|++.|+++..+|..+.+......+.|..+|++ |.......+ ......+.++...
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 36789999999999999999999997655566677778888885 221100000 0000011111111
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
.+...| .++...+++.|..|+.+|||+|+..++.
T Consensus 159 ~~~~KG----------------------------------------------~~L~~fL~~~~~~pk~IIfIDD~~~nl~ 192 (252)
T PF11019_consen 159 GGQDKG----------------------------------------------EVLKYFLDKINQSPKKIIFIDDNKENLK 192 (252)
T ss_pred CCCccH----------------------------------------------HHHHHHHHHcCCCCCeEEEEeCCHHHHH
Confidence 111111 1278899999999999999999987665
Q ss_pred H----HHHcCCCEEEEc
Q 020675 309 G----AQRIGMPCVVMR 321 (323)
Q Consensus 309 a----A~~aG~~~v~v~ 321 (323)
. .++.|+..+++.
T Consensus 193 sv~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 193 SVEKACKKSGIDFIGFH 209 (252)
T ss_pred HHHHHHhhCCCcEEEEE
Confidence 4 445688777764
|
The function is not known. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.2e-06 Score=76.01 Aligned_cols=51 Identities=18% Similarity=0.251 Sum_probs=40.9
Q ss_pred HhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 155 i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
+.....++.|++.++.+.++++|+++.++||.+...+..+..-|.+.|+..
T Consensus 139 v~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 139 VNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred HhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 345568899999999999999999999999975434455666777788764
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.6e-06 Score=87.50 Aligned_cols=114 Identities=21% Similarity=0.293 Sum_probs=75.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++||+.+.|+.|+++|++++++|+ .....+..+.+.+|+...++.. +++++.... .+.+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTG---D~~~tA~~ia~~~Gi~~~~~~~-v~g~~l~~~--------------~~~~-- 587 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITG---DSQETAVSIARRLGMPSKTSQS-VSGEKLDAM--------------DDQQ-- 587 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCCce-eEhHHhHhC--------------CHHH--
Confidence 6899999999999999999999999 6789999999999998766653 344333210 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccC-CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~-~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
-.++. ++..++. .+|+.+..+ -..+++. .+.+.|+||+.||+.|.++|++...+
T Consensus 588 ----------l~~~~--------~~~~Vfar~~P~~K~~i----v~~lq~~---g~~v~mvGDGvND~pAl~~AdVGia~ 642 (884)
T TIGR01522 588 ----------LSQIV--------PKVAVFARASPEHKMKI----VKALQKR---GDVVAMTGDGVNDAPALKLADIGVAM 642 (884)
T ss_pred ----------HHHHh--------hcCeEEEECCHHHHHHH----HHHHHHC---CCEEEEECCCcccHHHHHhCCeeEec
Confidence 00111 1112211 112233332 2334444 47899999999999999999976543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.09 E-value=4.3e-05 Score=65.22 Aligned_cols=96 Identities=8% Similarity=0.062 Sum_probs=62.8
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHH-HcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~-~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
|.+-++++|+-..++|-.++.+|+.+.+..+.+...|. .+.+....... +.++
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~-f~Gd------------------------- 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVI-FAGD------------------------- 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCccee-eccC-------------------------
Confidence 66778899999999999999999976443344444443 35554433321 2111
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
||.|.-|+ --.++..-++ -|+.|||.+||.+|+.+|++.|.+
T Consensus 169 ----------------------k~k~~qy~------------Kt~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 ----------------------KPKPGQYT------------KTQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred ----------------------CCCccccc------------ccHHHHhcCc----eEEecCCchhhhHHHhcCccceeE
Confidence 55555432 1123444444 489999999999999999998876
Q ss_pred c
Q 020675 321 R 321 (323)
Q Consensus 321 ~ 321 (323)
.
T Consensus 211 l 211 (237)
T COG3700 211 L 211 (237)
T ss_pred E
Confidence 4
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.8e-05 Score=82.98 Aligned_cols=43 Identities=23% Similarity=0.327 Sum_probs=39.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
+++||+.+.|+.|++.|++++++|+ .+...++.+.+.+|++.+
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi~~~ 610 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGIDFR 610 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCee
Confidence 6899999999999999999999999 678999999999999743
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.9e-05 Score=80.69 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCCCcEEEE--cCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLI--AGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~V--GDs~~Di~aA~~aG~~~v~ 319 (323)
|++.+++.+|++.++++.| ||+.||+.|.+.+|..+++
T Consensus 617 AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 617 AIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred HHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 3788899999999999998 9999999999999998776
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00013 Score=66.67 Aligned_cols=39 Identities=21% Similarity=0.098 Sum_probs=32.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++++++++++++|||.||+.|. ..+...|.|.+
T Consensus 170 l~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 170 LRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp HHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred HHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 7889999999999999999999999998 77778888865
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00045 Score=63.76 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=29.6
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
+++.+++.+|+..+++++|||+.+|+.|.+.+
T Consensus 178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~ 209 (266)
T PRK10187 178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVV 209 (266)
T ss_pred HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHH
Confidence 37889999999999999999999999999888
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00079 Score=67.40 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=61.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCCccccceeechh-hh-hhhhhcccccccccccCcchh
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EV-ERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~~~fd~~v~s~~-~~-~~~~~~~~~~g~~v~~~~~~~ 238 (323)
++|.+.+.+ +++|. .+|+|. +++..++.+.+. +|++.. ++.+ ++ ..+.|++.+.|.+.-.|
T Consensus 111 l~~~a~~~~---~~~g~-~vvVSA---Sp~~~Vepfa~~~LGid~V-----IgTeLev~~~G~~TG~i~g~~~c~G---- 174 (497)
T PLN02177 111 VHPETWRVF---NSFGK-RYIITA---SPRIMVEPFVKTFLGADKV-----LGTELEVSKSGRATGFMKKPGVLVG---- 174 (497)
T ss_pred cCHHHHHHH---HhCCC-EEEEEC---CcHHHHHHHHHHcCCCCEE-----EecccEECcCCEEeeeecCCCCCcc----
Confidence 667666644 45675 499998 678999999975 898753 3333 22 24556655555322111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++. ...+.+.+|.+..+ ++.|||.+|..+...++-..+
T Consensus 175 --------------------------------------e~K---v~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 175 --------------------------------------DHK---RDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred --------------------------------------HHH---HHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 001 12233556644444 899999999999999886544
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.69 E-value=7.5e-05 Score=77.13 Aligned_cols=45 Identities=16% Similarity=0.283 Sum_probs=40.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+++|++++.++.|++.|++++++|+ .+...+..+.+.+|+++++.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI~~v~a 490 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGVDDFIA 490 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCEEEc
Confidence 6899999999999999999999999 67899999999999986543
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00026 Score=73.28 Aligned_cols=45 Identities=16% Similarity=0.324 Sum_probs=41.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+++|++++.+++|++.|+++.++|+ .+...+..+-+.+|++++|.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI~~v~A 485 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTG---DNELTAATIAKEAGVDRFVA 485 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCceEEc
Confidence 6899999999999999999999999 67899999999999987554
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00012 Score=75.94 Aligned_cols=47 Identities=23% Similarity=0.446 Sum_probs=42.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
-+++|++.+.++.|++.|+++.++|+ .++..++.+-+.+|+++++-.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGId~v~Ae 582 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGIDEVRAE 582 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcChHhhecc
Confidence 36899999999999999999999999 678999999999999876553
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00035 Score=72.39 Aligned_cols=45 Identities=16% Similarity=0.353 Sum_probs=40.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+++||+++.+++|++.|+++.++|+ .+...+..+-+.+|++++|.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGId~v~A 489 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFLA 489 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcEEEc
Confidence 5799999999999999999999999 67899999999999987543
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00015 Score=61.59 Aligned_cols=54 Identities=19% Similarity=0.305 Sum_probs=44.6
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC-ccccceeechhh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEE 216 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~-~~fd~~v~s~~~ 216 (323)
.+.++||+.++|+.|++. +.++|+|+ +.+..+..+++.++.. .+|...+++.++
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~---~~~~yA~~vl~~ldp~~~~F~~ri~~rd~ 110 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTM---GTRAYAQAIAKLIDPDGKYFGDRIISRDE 110 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeC---CcHHHHHHHHHHhCcCCCeeccEEEEecc
Confidence 366899999999999965 99999999 6789999999999998 488545565543
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00034 Score=75.24 Aligned_cols=43 Identities=26% Similarity=0.509 Sum_probs=38.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITG---DNKETAEAICRRIGIFS 578 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecC---CCHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999 56788999999999853
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0024 Score=56.88 Aligned_cols=95 Identities=11% Similarity=0.149 Sum_probs=69.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC-------CCccccceeechhhhhhhhhccccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg-------l~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
..++++...++..+.+|+++.|.|. +.......+...-+ +..|||.. .|.
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSS---gsv~AqKllfg~s~~gdl~~y~~gyfDt~----------------iG~---- 179 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSS---GSVAAQKLLFGYSDAGDLRKYISGYFDTT----------------IGL---- 179 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcC---CcHHHHHHHHcccCcchHHHHhhhhhhcc----------------ccc----
Confidence 5899999999999999999999998 44444444443321 12223321 111
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
|=.-.. |..+.+.+|.++.+++|.-|-..-..+|+.+
T Consensus 180 -----------------------------K~e~~s--------------y~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~a 216 (254)
T KOG2630|consen 180 -----------------------------KVESQS--------------YKKIGHLIGKSPREILFLTDVPREAAAARKA 216 (254)
T ss_pred -----------------------------eehhHH--------------HHHHHHHhCCChhheEEeccChHHHHHHHhc
Confidence 222222 8899999999999999999999999999999
Q ss_pred CCCEEEEc
Q 020675 314 GMPCVVMR 321 (323)
Q Consensus 314 G~~~v~v~ 321 (323)
|+.+.++.
T Consensus 217 Gl~a~l~~ 224 (254)
T KOG2630|consen 217 GLQAGLVS 224 (254)
T ss_pred ccceeeee
Confidence 99887764
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00082 Score=52.73 Aligned_cols=50 Identities=20% Similarity=0.217 Sum_probs=37.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccce
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 210 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~ 210 (323)
.++||+.++|+.|+++|.+++++||.+..........++.+|+.--.+.+
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i 63 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEI 63 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGE
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEE
Confidence 37899999999999999999999997654556667777889987444443
|
... |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0003 Score=69.41 Aligned_cols=130 Identities=10% Similarity=0.087 Sum_probs=70.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc---------CCCccccceeechhhhhhhhhcccccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---------GSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l---------gl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+...|.+..+|+.||++|.++.++|| +....+..+++.+ ++.++||.+|+.+. ....|+...+--.
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTN---S~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~--KP~FF~~~~pfr~ 256 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITN---SPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDAR--KPGFFTEGRPFRE 256 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-S---S-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES----CCHHHCT---EEE
T ss_pred ccCCchHHHHHHHHHhcCceEEEecC---CCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCC--CCcccCCCCceEE
Confidence 33568999999999999999999999 6778888888863 35689998766543 1112221111100
Q ss_pred cc--cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhH
Q 020675 231 IS--SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGV 307 (323)
Q Consensus 231 v~--~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di 307 (323)
+. .|.-.. . + ..+..++. .+| ..+- .....+.+|...+++++|||+. .||
T Consensus 257 vd~~~g~l~~-~----~------------~~~~l~~g-~vY------~gGn---~~~l~~ll~~~g~~VLY~GDhi~~Di 309 (448)
T PF05761_consen 257 VDTETGKLKW-G----K------------YVGPLEKG-KVY------SGGN---WDQLHKLLGWRGKEVLYFGDHIYGDI 309 (448)
T ss_dssp EETTTSSEEC-S-------------------SS--TC--EE------EE-----HHHHHHHCT--GGGEEEEESSTTTTH
T ss_pred EECCCCcccc-c----c------------ccccccCC-CEe------ecCC---HHHHHHHHccCCCeEEEECCchhhhh
Confidence 00 000000 0 0 00000000 111 1121 4566778899999999999996 699
Q ss_pred HHHHHc-CCCEEEEc
Q 020675 308 AGAQRI-GMPCVVMR 321 (323)
Q Consensus 308 ~aA~~a-G~~~v~v~ 321 (323)
...++. ||+|++|-
T Consensus 310 ~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 310 LKSKKRHGWRTAAII 324 (448)
T ss_dssp HHHHHHH-SEEEEE-
T ss_pred hhhccccceEEEEEe
Confidence 888777 99999874
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0023 Score=54.19 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=31.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 201 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l 201 (323)
..||+.++...++++||++..+|+........++..|...
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 4679999999999999999999996543445666667665
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00011 Score=62.10 Aligned_cols=49 Identities=18% Similarity=0.497 Sum_probs=38.4
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC-Ccccccee
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS-ERISKIKI 211 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl-~~~fd~~v 211 (323)
.+.++||+.++|+.|.+. +.++|.|. +...++..+++.+.. ..+|+..+
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~---~~~~ya~~v~~~ldp~~~~~~~~~ 83 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTS---ASEEYAEPVLDALDPNGKLFSRRL 83 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-S---S-HHHHHHHHHHHTTTTSSEEEEE
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEe---ehhhhhhHHHHhhhhhcccccccc
Confidence 356899999999999665 99999999 568999999999987 46776643
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0012 Score=53.69 Aligned_cols=92 Identities=7% Similarity=0.118 Sum_probs=67.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
-++++.+.+.|++|++. +.++|.|+ .....+....+..|+.-..-+ .+++ -
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASg---Dr~gsl~~lae~~gi~~~rv~--a~a~-~---------------------- 79 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASG---DRKGSLVQLAEFVGIPVERVF--AGAD-P---------------------- 79 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecC---CcchHHHHHHHHcCCceeeee--cccC-H----------------------
Confidence 46899999999999999 99999998 445777788888887532221 1111 1
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+. =..+++.++-+-+.|+||||+.||+.+.++|.+..+.
T Consensus 80 ---------------------------e~--------------K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 80 ---------------------------EM--------------KAKIIRELKKRYEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred ---------------------------HH--------------HHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEE
Confidence 11 2345566766678999999999999999999888665
Q ss_pred Ec
Q 020675 320 MR 321 (323)
Q Consensus 320 v~ 321 (323)
+.
T Consensus 119 iq 120 (152)
T COG4087 119 IQ 120 (152)
T ss_pred ec
Confidence 54
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0007 Score=60.69 Aligned_cols=52 Identities=12% Similarity=0.222 Sum_probs=39.4
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCC-hHHHHHHHHHcCCCcccc
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISK 208 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~-~~~~~~~l~~lgl~~~fd 208 (323)
.....+.||+.||++..-++|..+..+||++... ...+..-|..+|+.....
T Consensus 118 a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~ 170 (274)
T COG2503 118 AKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE 170 (274)
T ss_pred hcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc
Confidence 3456799999999999999999999999976433 334555677778865443
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00083 Score=72.21 Aligned_cols=118 Identities=19% Similarity=0.276 Sum_probs=77.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc-ceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd-~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
-+|+|++++.++.|+++|+++.++|+ .....+..+-+.+|+..--. ..++.+.+...- .+.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l--------------~~~- 607 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEAESALVIDGAELDAL--------------SDE- 607 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhc--------------CHH-
Confidence 47999999999999999999999999 67899999999999864332 123333333210 000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccC-CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~-~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
++.+.+. +-+ +|. -+|+.+..++ +++++.| .-+.|.||+.||+.|-++|.+..
T Consensus 608 --------------el~~~~~---~~~--VfARvsP~qK~~IV----~~lq~~g---~vVamtGDGvNDapALk~ADVGI 661 (917)
T COG0474 608 --------------ELAELVE---ELS--VFARVSPEQKARIV----EALQKSG---HVVAMTGDGVNDAPALKAADVGI 661 (917)
T ss_pred --------------HHHHHhh---hCc--EEEEcCHHHHHHHH----HHHHhCC---CEEEEeCCCchhHHHHHhcCccE
Confidence 0111111 111 211 1244454544 4555554 45789999999999999999988
Q ss_pred EEEc
Q 020675 318 VVMR 321 (323)
Q Consensus 318 v~v~ 321 (323)
.+..
T Consensus 662 amg~ 665 (917)
T COG0474 662 AMGG 665 (917)
T ss_pred Eecc
Confidence 6654
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0012 Score=70.73 Aligned_cols=112 Identities=15% Similarity=0.279 Sum_probs=72.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++|++.+.++.|+++|+++.++|+ .+...+..+.+.+|+.. +. ++++.+...- .+.+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~~--~~-v~~g~~l~~~--------------~~~e-- 572 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGIDA--ND-FLLGADIEEL--------------SDEE-- 572 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCC--CC-eeecHhhhhC--------------CHHH--
Confidence 6899999999999999999999999 67888999999999963 11 2333332210 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+.+.+ ++..+|.. +|+.+..++ .++++.| +.+.|+||+.||..|-++|.+...+
T Consensus 573 -------------l~~~~-----~~~~vfAr~~Pe~K~~iV----~~lq~~G---~vVam~GDGvNDapALk~AdVGIAm 627 (867)
T TIGR01524 573 -------------LAREL-----RKYHIFARLTPMQKSRII----GLLKKAG---HTVGFLGDGINDAPALRKADVGISV 627 (867)
T ss_pred -------------HHHHh-----hhCeEEEECCHHHHHHHH----HHHHhCC---CEEEEECCCcccHHHHHhCCEEEEe
Confidence 00000 11111111 233444433 3445544 4688999999999999999988665
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0016 Score=68.71 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=38.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
+++|++.+.++.|++.|+++.++|+ .+...+..+.+.+|+.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLGT 483 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999 67889999999999964
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0016 Score=69.96 Aligned_cols=112 Identities=12% Similarity=0.153 Sum_probs=72.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++|++.+.++.|+++|+++.++|+ .+...+..+.+.+|+.. +. ++++.+...- .+.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~~--~~-vi~G~el~~~--------------~~~e-- 607 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLEP--GE-PLLGTEIEAM--------------DDAA-- 607 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC--CC-ccchHhhhhC--------------CHHH--
Confidence 6899999999999999999999999 67889999999999963 22 3444333210 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..+ + + ++..++.. +|+.+.+++ ..+++.| +-+.|+||+.||..|-++|.+...+
T Consensus 608 --l~~--------~---v-----~~~~VfAr~sPe~K~~iV----~~Lq~~G---~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 608 --LAR--------E---V-----EERTVFAKLTPLQKSRVL----KALQANG---HTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred --HHH--------H---h-----hhCCEEEEeCHHHHHHHH----HHHHhCC---CEEEEECCCchhHHHHHhCCEEEEe
Confidence 000 0 0 11112111 133444433 3444444 4588999999999999999887554
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0016 Score=69.86 Aligned_cols=113 Identities=13% Similarity=0.219 Sum_probs=73.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
-+++|++.+.++.|+++|+++.++|+ .+...+..+.+.+|+.. + .++++.+...- .+.++
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~--~-~v~~G~el~~l--------------~~~el 608 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLDA--G-EVLIGSDIETL--------------SDDEL 608 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCc--c-CceeHHHHHhC--------------CHHHH
Confidence 36899999999999999999999999 67889999999999952 2 23444443220 00000
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.+ +. ++..++.. +|+.+..++ .++++.| .-+.|+||+.||..|-++|.+...
T Consensus 609 ----~~--------~~--------~~~~VfAr~sPe~K~~IV----~~Lq~~G---~vVam~GDGvNDaPALk~ADVGIA 661 (902)
T PRK10517 609 ----AN--------LA--------ERTTLFARLTPMHKERIV----TLLKREG---HVVGFMGDGINDAPALRAADIGIS 661 (902)
T ss_pred ----HH--------HH--------hhCcEEEEcCHHHHHHHH----HHHHHCC---CEEEEECCCcchHHHHHhCCEEEE
Confidence 00 00 11112111 244444444 3444444 457899999999999999988765
Q ss_pred E
Q 020675 319 V 319 (323)
Q Consensus 319 ~ 319 (323)
+
T Consensus 662 m 662 (902)
T PRK10517 662 V 662 (902)
T ss_pred e
Confidence 4
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0013 Score=61.21 Aligned_cols=26 Identities=15% Similarity=-0.018 Sum_probs=22.9
Q ss_pred CCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 294 VRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 294 p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+-.+|.+|||+||+.|.+.+.+.+|.
T Consensus 226 ~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 226 PIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CceEEEecCChhhHHHHHhCCeeEEe
Confidence 44789999999999999999998765
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0022 Score=69.91 Aligned_cols=41 Identities=22% Similarity=0.320 Sum_probs=38.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
+++|++.+.++.|+++|++++++|+ .....+..+.+.+|+.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTG---D~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTG---DFPETAKAIAQEVGII 686 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 6899999999999999999999999 6778899999999995
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0034 Score=53.23 Aligned_cols=89 Identities=22% Similarity=0.269 Sum_probs=47.6
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHHc-CCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCC
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-GLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLR 163 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~ 163 (323)
.-+..|+||||+|.... ..-.+..|++. ... ..+......++... .++++.. + +..+..+..+ ..+.
T Consensus 7 ~~~ciDIDGtit~~~t~--~~~~n~~f~kslse~--d~t~y~lhkil~i~---~ee~~k~-~---e~~ea~l~ke-~l~~ 74 (194)
T COG5663 7 LRCCIDIDGTITDDPTF--APYLNPAFEKSLSEA--DPTDYDLHKILNIT---TEEFWKW-M---EQTEAWLYKE-ALLA 74 (194)
T ss_pred hheeeccCCceecCccc--chhccHHHHhhhhhc--ccccccHHHHhCcc---HHHHHHH-H---HHHHHHHHHH-HHHH
Confidence 35678999999997653 23334444432 111 11122222333322 3333322 2 2222222222 4467
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCC
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
.++...|..++++ .+++.+|..
T Consensus 75 q~v~~~L~~~~e~-~~L~~itar 96 (194)
T COG5663 75 QLVKQVLPSLKEE-HRLIYITAR 96 (194)
T ss_pred HHHHHHhHHHHhh-ceeeeeehh
Confidence 7899999999886 788889984
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0038 Score=67.53 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=72.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++|++.+.++.|+++|+++.++|+ .....+..+-+.+|+..--.. ++++.+...- .+.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~~~~~-vi~G~~~~~l--------------~~~--- 637 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILTFGGL-AMEGKEFRRL--------------VYE--- 637 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCCCCce-EeeHHHhhhC--------------CHH---
Confidence 6899999999999999999999999 677889999999999642222 3444333210 000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+...+. ++..++.. +|+.+..++ ..+++.| .-+.|+||+.||..|-++|.+...+
T Consensus 638 ---------el~~~i--------~~~~Vfar~sPe~K~~iV----~~lq~~g---~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 638 ---------EMDPIL--------PKLRVLARSSPLDKQLLV----LMLKDMG---EVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred ---------HHHHHh--------ccCeEEEECCHHHHHHHH----HHHHHCC---CEEEEECCCCchHHHHHhCCcceec
Confidence 000111 11112111 133344443 3444444 4688999999999999999887654
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0033 Score=51.44 Aligned_cols=43 Identities=7% Similarity=-0.032 Sum_probs=31.6
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChH------------HHHHHHHHcCCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDR------------IARSVVEKLGSE 204 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~------------~~~~~l~~lgl~ 204 (323)
+.+++.+.|+.|+++|+.++++|+....... .+..++++.++.
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip 79 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP 79 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC
Confidence 6778888999999999999999986422212 556667776664
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0015 Score=59.30 Aligned_cols=40 Identities=8% Similarity=-0.022 Sum_probs=36.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++|++++++++|||+.||+.|++.+|...|.|.+
T Consensus 172 l~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 172 LQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred HHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 7888999999999999999999999999998877777765
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0029 Score=66.11 Aligned_cols=44 Identities=30% Similarity=0.484 Sum_probs=39.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f 207 (323)
+++|++...+..||+.|++++++|+ .++..++.+-+.+|++..+
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~~V~ 766 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGIDNVY 766 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcceEE
Confidence 5899999999999999999999999 6789999999999966543
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0047 Score=56.16 Aligned_cols=36 Identities=6% Similarity=-0.052 Sum_probs=30.0
Q ss_pred HHHHHHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGD----s~~Di~aA~~aG~~~v~v~~ 322 (323)
++.++++ ++++++||| +.||++|-+.+|...+.|.+
T Consensus 193 l~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 193 LRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred HHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 5666666 699999999 89999999998887777754
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0042 Score=67.54 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=37.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 608 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 36899999999999999999999999 5678888899999984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.015 Score=53.87 Aligned_cols=48 Identities=15% Similarity=0.245 Sum_probs=35.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
++||+.++|+.|+++|++++++||.+..........++.+|+..-.+.
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~ 66 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQ 66 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 567899999999999999999999542223444456778888644443
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0027 Score=55.59 Aligned_cols=37 Identities=14% Similarity=0.050 Sum_probs=34.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.++++++++++++++|||+.+|+.+++.+|+.+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 168 LQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6888999999999999999999999999999998763
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0029 Score=56.22 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=34.9
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++.+|++++++++|||+.||+.|.+.+|..+++
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am 227 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM 227 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE
Confidence 36888999999999999999999999999999998664
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0098 Score=61.81 Aligned_cols=117 Identities=15% Similarity=0.198 Sum_probs=74.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc---eeechhhhhhhhhcccccccccccCcc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI---KIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~---~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
-||+|++++.++.+++.|+++.++|+ .+...+..+.++.|+-..-+. ..+++.+.. ++.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD---------------~ls 644 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFSEDEDVSSMALTGSEFD---------------DLS 644 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCcCCccccccccchhhhh---------------cCC
Confidence 47999999999999999999999999 678999999999997443221 122222211 111
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
+. .+ ...+..+..+.. .|..+.+++ +++++.| +=+-|-||+.||-.+.+.|.+
T Consensus 645 ~~------------~~-------~~~~~~~~vFaR~~P~HK~kIV----eaLq~~g---eivAMTGDGVNDApALK~AdI 698 (972)
T KOG0202|consen 645 DE------------EL-------DDAVRRVLVFARAEPQHKLKIV----EALQSRG---EVVAMTGDGVNDAPALKKADI 698 (972)
T ss_pred HH------------HH-------HHHhhcceEEEecCchhHHHHH----HHHHhcC---CEEEecCCCccchhhhhhccc
Confidence 11 00 001222222211 244455544 4455554 446789999999999999988
Q ss_pred CEEEE
Q 020675 316 PCVVM 320 (323)
Q Consensus 316 ~~v~v 320 (323)
...+=
T Consensus 699 GIAMG 703 (972)
T KOG0202|consen 699 GIAMG 703 (972)
T ss_pred ceeec
Confidence 86653
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.008 Score=53.39 Aligned_cols=37 Identities=16% Similarity=0.341 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
..++.|+.|+++|++++++|+ .....+..++..+++.
T Consensus 19 ~~~~al~~l~~~g~~~~i~TG---R~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 19 ETIEALKELQEKGIKLVIATG---RSYSSIKRLLKELGID 55 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEECS---STHHHHHHHHHHTTHC
T ss_pred HHHHHHHhhcccceEEEEEcc---Ccccccccccccccch
Confidence 445567778889999999999 4567788888888877
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0027 Score=57.18 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=33.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|...++
T Consensus 164 l~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 164 LRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred HHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 7889999999999999999999999999999977653
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0047 Score=56.31 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=34.6
Q ss_pred HHHHHHHcCCC--CCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKP--VRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~--p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++ .+++++|||+.||+.|.+.+|..+++
T Consensus 181 i~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam 219 (256)
T TIGR01486 181 ANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV 219 (256)
T ss_pred HHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence 68889999999 99999999999999999999998775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.025 Score=49.78 Aligned_cols=40 Identities=20% Similarity=0.421 Sum_probs=34.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
..+|++.+||+.+.+ .+.++|-|. +...++..++..+++.
T Consensus 45 ~kRP~l~eFL~~~~~-~feIvVwTA---a~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYE-DYDIVIWSA---TSMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHh-CCEEEEEec---CCHHHHHHHHHHhccc
Confidence 379999999999998 599999999 4578999999988764
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.031 Score=61.23 Aligned_cols=42 Identities=19% Similarity=0.365 Sum_probs=38.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-+++|++.+.|+.|+++|+++.++|+ .+...+..+.+.+|+.
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTG---D~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITG---DNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 36999999999999999999999999 6778888899999994
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.023 Score=52.41 Aligned_cols=49 Identities=22% Similarity=0.307 Sum_probs=40.8
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeech
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~ 214 (323)
.|.+.+-|.+|++.|..+++=|. |..+.+...++.+++..+|+.++..+
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHhCCccccEEEEeCC
Confidence 34556677889999999999998 67899999999999999999865443
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.044 Score=48.96 Aligned_cols=43 Identities=21% Similarity=0.292 Sum_probs=35.0
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
....++.||+.+.++.|.+. ++-+|+|. +...+++.+...+|+
T Consensus 79 E~sa~lvPgA~etm~~l~~~-~tp~v~ST---SY~qy~~r~a~~ig~ 121 (315)
T COG4030 79 ELSAKLVPGAEETMATLQER-WTPVVIST---SYTQYLRRTASMIGV 121 (315)
T ss_pred HhhcccCCChHHHHHHHhcc-CCceEEec---cHHHHHHHHHHhcCC
Confidence 34578999999999999887 66666666 578889999988887
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.038 Score=55.49 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=36.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
+++|++.+.++.|++.|+++.++|+ .....+..+-+.+|+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltG---D~~~~a~~ia~~lgi 386 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTG---DNVLTAKAIAKELGI 386 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCc
Confidence 6899999999999999999999999 667888888888886
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.017 Score=52.62 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=27.1
Q ss_pred HHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 167 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 167 ~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
.++|+.|+++|++++++|+ .....+..+++.+|+..
T Consensus 22 ~~~i~~l~~~g~~~~~~Tg---R~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 22 KEVLERLQELGIPVIPCTS---KTAAEVEYLRKELGLED 57 (256)
T ss_pred HHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCC
Confidence 4556777888999999998 34566777888888753
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.011 Score=53.60 Aligned_cols=39 Identities=5% Similarity=-0.084 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHc-------CCCEEEEc
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-------GMPCVVMR 321 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a-------G~~~v~v~ 321 (323)
++.+++++++.+++++||||+.+|+.+++.+ |..+|.|.
T Consensus 172 ~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 172 VKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 7889999999999999999999999999999 66677663
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.086 Score=57.88 Aligned_cols=43 Identities=21% Similarity=0.171 Sum_probs=37.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-+++||+.+.|+.|+++|++++++|+ .....+..+....|+-.
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTG---D~~~TA~~IA~~~~ii~ 672 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTG---DKVETAINIGYSCRLLS 672 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999 56788888888888743
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.019 Score=56.33 Aligned_cols=40 Identities=13% Similarity=-0.046 Sum_probs=34.8
Q ss_pred HHHHHHHc---CCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYA---EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~l---gv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++ |++++++++|||+.||++|.+.+|...|.|.+
T Consensus 180 l~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 180 LAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred HHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 78888998 99999999999999999999999965555544
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.1 Score=51.44 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHH
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEAR 244 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 244 (323)
...+++..|+++|+-++|+|- +....+..++.++.- . ++-.++...-. .
T Consensus 259 ~fQ~~Ik~l~kqGVlLav~SK---N~~~da~evF~khp~-----M-iLkeedfa~~~---------i------------- 307 (574)
T COG3882 259 TFQNFIKGLKKQGVLLAVCSK---NTEKDAKEVFRKHPD-----M-ILKEEDFAVFQ---------I------------- 307 (574)
T ss_pred HHHHHHHHHHhccEEEEEecC---CchhhHHHHHhhCCC-----e-EeeHhhhhhhe---------e-------------
Confidence 344667889999999999996 567778777776532 1 22222221100 0
Q ss_pred HHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 245 KAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 245 k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
..-|..+= ++++++++|+..+..+||+|++...+--++-+
T Consensus 308 ----------------NW~~K~eN--------------irkIAkklNlg~dSmvFiDD~p~ErE~vk~~~ 347 (574)
T COG3882 308 ----------------NWDPKAEN--------------IRKIAKKLNLGLDSMVFIDDNPAERELVKREL 347 (574)
T ss_pred ----------------cCCcchhh--------------HHHHHHHhCCCccceEEecCCHHHHHHHHhcC
Confidence 00111111 78999999999999999999998877766665
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.77 Score=44.04 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=33.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
+|+++.+++|- .-.-++|||+...-.+|++..|+++-+.
T Consensus 413 cFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~ 451 (468)
T KOG3107|consen 413 CFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRIS 451 (468)
T ss_pred HHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeec
Confidence 49999999997 4456789999999999999999988764
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.043 Score=53.56 Aligned_cols=99 Identities=12% Similarity=0.144 Sum_probs=73.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 241 (323)
+.....++.+.+.+.|.+|+++|.-= -+...++..+...|.+-+--- ++.+.+..-.
T Consensus 100 pn~~~~eL~e~ai~n~krVIlISDMY-lps~Il~~~L~s~g~d~~nip-iY~S~e~rl~--------------------- 156 (635)
T COG5610 100 PNKKNIELVEEAIKNEKRVILISDMY-LPSSILRTFLNSFGPDFNNIP-IYMSSEFRLK--------------------- 156 (635)
T ss_pred ccccchHHHHHHHhCCCeEEEEeccc-CcHHHHHHHHHhcCCCccCce-eeecceeehh---------------------
Confidence 34456789999999999999999742 355778888888888743322 3444333221
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 020675 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 318 (323)
Q Consensus 242 ~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v 318 (323)
|-+-.. |..+++.-+++|.+.+++||.. .|+..+++.|+.|.
T Consensus 157 ---------------------KnSg~L--------------Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 157 ---------------------KNSGNL--------------FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred ---------------------cccchH--------------HHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 333333 8999999999999999999975 69999999999764
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.053 Score=49.31 Aligned_cols=53 Identities=30% Similarity=0.542 Sum_probs=39.5
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
.+...+.+....+.+++|+.++++.|.++++|+.|.|. +-...++.+++..+.
T Consensus 77 k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSA---GlgdvI~~vL~q~~~ 129 (246)
T PF05822_consen 77 KSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSA---GLGDVIEEVLRQAGV 129 (246)
T ss_dssp GGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEE---EEHHHHHHHHHHTT-
T ss_pred HHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeC---CcHHHHHHHHHHcCC
Confidence 34556666667788999999999999999999999999 788999999998754
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.2 Score=51.05 Aligned_cols=140 Identities=17% Similarity=0.209 Sum_probs=84.4
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLR 163 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~ 163 (323)
-|.||=|+||||+.++.+ -.++-..|.+| + .
T Consensus 530 ~kIVISDIDGTITKSDvL------Gh~lp~iGkDW---T----------------------------------------h 560 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVL------GHVLPMIGKDW---T----------------------------------------H 560 (738)
T ss_pred CcEEEecCCCceEhhhhh------hhhhhhhcCcc---h----------------------------------------h
Confidence 468999999999988765 34444455542 1 1
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc--ccc-eeechhhhhhhhhcccccccccccCcchhHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI--SKI-KIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~--fd~-~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
-||..+...++++||++..+|....+....++..|..+.-+.+ -+. ++++.+.. -+.+
T Consensus 561 ~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~l------------------f~Al- 621 (738)
T KOG2116|consen 561 TGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSL------------------FAAL- 621 (738)
T ss_pred hhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcc------------------hHHH-
Confidence 1666677778899999999998665555667777776654432 121 12222211 1112
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcE-EEEcCChhhHHHHHHcCCCE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC-FLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~-v~VGDs~~Di~aA~~aG~~~ 317 (323)
.++|. .+||+. =.|+|+..+.+-+.-+.+-- .-||...+|+..=+++|++.
T Consensus 622 --------------~REVI-~RkPe~-----------FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 622 --------------HREVI-ERKPEV-----------FKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred --------------HHHHH-HcCchh-----------hhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCc
Confidence 22222 234442 23566777777776333322 24788999999999999864
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.3 Score=45.88 Aligned_cols=35 Identities=26% Similarity=0.482 Sum_probs=21.8
Q ss_pred cCCCcccccCCCCCCCCCCCceEEEEecCCccccccc
Q 020675 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYR 100 (323)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~kaViFD~DGTLid~~~ 100 (323)
.++.+.||+..+. .+++ +.-++.||+||||+--..
T Consensus 17 r~~~~kf~~~~s~-~ss~-~~fgfafDIDGVL~RG~~ 51 (389)
T KOG1618|consen 17 RPPMRKFISEISF-ESSP-PTFGFAFDIDGVLFRGHR 51 (389)
T ss_pred CCchhhhhcccCC-CCCC-CceeEEEecccEEEecCC
Confidence 3556666655442 2223 334899999999986543
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.54 Score=52.17 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=35.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-++++|+.+.++.|+++|+++.++|+ .....+..+-...|+-
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTG---D~~~tAi~IA~s~~Ll 766 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTG---DKQETAISIGYSSKLL 766 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHhCCC
Confidence 36999999999999999999999999 5567777777766763
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.33 Score=44.30 Aligned_cols=52 Identities=19% Similarity=0.410 Sum_probs=38.1
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeech
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~ 214 (323)
+.||+.++|+.|+++|++++++||.+..........++.+|++--.+. ++++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~-i~ts 69 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSV-FYTS 69 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhh-EecH
Confidence 578999999999999999999999764344555666777888533343 3444
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.1 Score=49.42 Aligned_cols=128 Identities=16% Similarity=0.126 Sum_probs=70.9
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc---CCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l---gl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
--|....+|+.|+++|-++.++|| ++...+..-+..+ ++.++||++|+-++. . ..|+..- .-++..|+.
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTN---SPysFVd~GM~flvG~~WRdlFDVVIvqA~K-P-~Fftde~---rPfR~~dek 312 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITN---SPYSFVDKGMRFLVGDDWRDLFDVVIVQANK-P-EFFTDER---RPFRKYDEK 312 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeC---CchhhhhcCceeeeCccHHhhhheeEEecCC-C-ccccccc---Ccchhhccc
Confidence 346788999999999999999999 4556666555442 356889987654321 1 0111000 000000000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCcc-ccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHH-HcCC
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVD-IDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQ-RIGM 315 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~-i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~-~aG~ 315 (323)
.-+ -..+.|- |-++. || .++. +...++--|..-.+++++||.. +|+..-. +.||
T Consensus 313 -------~~s----l~wdkv~---klekgkiY------y~G~---l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgW 369 (510)
T KOG2470|consen 313 -------RGS----LLWDKVD---KLEKGKIY------YQGN---LKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGW 369 (510)
T ss_pred -------ccc----hhhhhhh---hcccCcee------eecc---HHHHHHHhccCCCeeEEecCcchhhhhhhHhhccc
Confidence 000 0011111 21111 10 1111 3445566677778999999996 6988876 8999
Q ss_pred CEEEE
Q 020675 316 PCVVM 320 (323)
Q Consensus 316 ~~v~v 320 (323)
++-.+
T Consensus 370 RTgAI 374 (510)
T KOG2470|consen 370 RTGAI 374 (510)
T ss_pred ccccc
Confidence 87654
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.44 Score=43.55 Aligned_cols=25 Identities=8% Similarity=0.070 Sum_probs=22.6
Q ss_pred EEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 298 FLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 298 v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
||++|....++.|. .+++++.|..|
T Consensus 236 IFFDDQ~~H~~~a~-~~vps~hVP~g 260 (264)
T PF06189_consen 236 IFFDDQDGHLESAS-KVVPSGHVPYG 260 (264)
T ss_pred EeecCchhhhhHhh-cCCCEEeccCC
Confidence 99999999999999 88999998765
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.12 Score=49.67 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=19.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
++|.+..=|..|.+.||.++|.||.
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecc
Confidence 4455556677888899999999984
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.1 Score=51.82 Aligned_cols=44 Identities=16% Similarity=0.382 Sum_probs=37.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
..||++|=+++||+-|++.+.+|+ .+.-.+..+-...|++++..
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TG---DN~~TAa~IA~EAGVDdfiA 491 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFIA 491 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC---CCHHHHHHHHHHhCchhhhh
Confidence 568999999999999999999999 56777888888889887543
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.14 Score=46.83 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=39.6
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 215 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~ 215 (323)
+.||+.++|+.|+++|++++++||.+..........++.+|++--.+. ++++.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~-i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDE-VFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHH-eEcHH
Confidence 577999999999999999999999654333456777888998643444 34443
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.78 Score=38.65 Aligned_cols=32 Identities=13% Similarity=0.140 Sum_probs=28.8
Q ss_pred CCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 292 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 292 v~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..+++++||||.. .||..|...|-..||...|
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~g 169 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPG 169 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccc
Confidence 5799999999996 7999999999999998754
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.076 Score=48.32 Aligned_cols=35 Identities=6% Similarity=-0.033 Sum_probs=29.9
Q ss_pred HHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEEcC
Q 020675 287 AEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 287 l~~lgv~p~~~v~VGD----s~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+. +++++++||| +.||++|.+.-|+.++-|++
T Consensus 194 l~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 194 LQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred HHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 34444 9999999999 79999999999999988864
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.61 Score=42.30 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
+|+.+.+++|-+.-.-++|||+..--.+|+..+|+++-|..
T Consensus 218 cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 218 CFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred HHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 49999999998778889999999999999999999998764
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.14 Score=42.41 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=63.9
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCC
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAP 161 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 161 (323)
|..|.+..|||-||.|.... |...++ +.+..++.........+..+....-+....++. ...+.. .+.
T Consensus 1 m~kk~iaIDmD~vLadll~e-wv~~~N-~y~D~~lk~~di~gwdik~yv~~~~g~i~~il~-----ep~fFR-----nL~ 68 (180)
T COG4502 1 MNKKTIAIDMDTVLADLLRE-WVKRYN-IYKDKLLKMSDIKGWDIKNYVKPECGKIYDILK-----EPHFFR-----NLG 68 (180)
T ss_pred CCCceEEeeHHHHHHHHHHH-HHHHhh-hccccCcChHhhcccchhhccCccCCeeeeecc-----Ccchhh-----hcC
Confidence 45678999999999998874 666666 444444441111111111111111111111110 011111 366
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCC---CCChHHHHHHHHHcCCCccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYG---KSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~---~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
..|++.+++++|-+. +.++|+|.+. ++...-.+-+.+.+.+-.+-.+
T Consensus 69 V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~ 118 (180)
T COG4502 69 VQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNI 118 (180)
T ss_pred ccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhE
Confidence 899999999999987 9999999752 2223344455666776665544
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.8 Score=45.77 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=26.9
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCCc
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSER 205 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~~ 205 (323)
.++..+..| +++|+|. +++..++..++. +|.+.
T Consensus 101 ~~~~~~~~g-~~vVVTA---sPrvmVEpFake~LG~D~ 134 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTR---MPRVMVERFAKEHLRADE 134 (498)
T ss_pred HHHHHHcCC-eEEEEeC---CHHHHHHHHHHHhcCCce
Confidence 455666778 9999998 688999999988 88765
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.33 Score=53.11 Aligned_cols=42 Identities=21% Similarity=0.214 Sum_probs=34.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-++.+||.|.|+.|+++|++++++|+ ...+.+-.+.-..++.
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTG---DK~ETAiNIg~sC~Ll 691 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTG---DKQETAINIGYSCRLL 691 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcC---cHHHHHHHHHHhhcCC
Confidence 35889999999999999999999999 4566666666666654
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.13 E-value=0.87 Score=48.02 Aligned_cols=43 Identities=26% Similarity=0.430 Sum_probs=38.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-|.+||+++.++.++.+|+++-.+|+ .+-..++.+....|+..
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTG---DNI~TAkAIA~eCGILt 688 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTG---DNINTAKAIARECGILT 688 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeC---CcHHHHHHHHHHccccc
Confidence 36899999999999999999999999 67788889999999853
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.49 Score=49.87 Aligned_cols=30 Identities=13% Similarity=0.086 Sum_probs=25.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
.+.+++ +++++.+++|||+.||+.|.+.++
T Consensus 662 l~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~ 691 (726)
T PRK14501 662 VRRLLE--AGPYDFVLAIGDDTTDEDMFRALP 691 (726)
T ss_pred HHHHHh--cCCCCEEEEECCCCChHHHHHhcc
Confidence 566666 788999999999999999999874
|
|
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.82 E-value=1 Score=44.08 Aligned_cols=34 Identities=9% Similarity=0.093 Sum_probs=25.3
Q ss_pred HHHHHHHcCCCCCcEE-EEcCChhhHHHHHHcCCC
Q 020675 283 LRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v-~VGDs~~Di~aA~~aG~~ 316 (323)
|..-++.+..++.--+ -+|....|+.+-+++|++
T Consensus 482 yLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 482 YLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 5555666666666444 588889999999999886
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.7 Score=44.92 Aligned_cols=31 Identities=10% Similarity=-0.061 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCCCCc---EEEEcCChhhHHHHHH
Q 020675 282 ALRAGAEYAEKPVRN---CFLIAGSQSGVAGAQR 312 (323)
Q Consensus 282 ~~~~al~~lgv~p~~---~v~VGDs~~Di~aA~~ 312 (323)
+.+.+++.+|++..+ .++|||..+|..|.+.
T Consensus 305 Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 305 AVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred HHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence 368889999988764 3899999999999886
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.45 E-value=0.76 Score=44.34 Aligned_cols=31 Identities=10% Similarity=-0.128 Sum_probs=24.1
Q ss_pred HHHHHHHcCCCC---CcEEEEcCChhhHHHHHHc
Q 020675 283 LRAGAEYAEKPV---RNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 283 ~~~al~~lgv~p---~~~v~VGDs~~Di~aA~~a 313 (323)
.+.+++.+|... .-.+||||-.+|-.+.+.+
T Consensus 288 v~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L 321 (366)
T PLN03017 288 LEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML 321 (366)
T ss_pred HHHHHHhcccccCCCceEEEeCCCCccHHHHHHH
Confidence 678888888653 3489999999888777755
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.78 E-value=1.1 Score=40.92 Aligned_cols=54 Identities=31% Similarity=0.519 Sum_probs=42.1
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCC
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSE 204 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~ 204 (323)
.....+.+....+.+++|..++.+.|+++++++.|.|. +.-..++.++.. .++.
T Consensus 125 k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSA---GigdiiEev~~q~~~~~ 179 (298)
T KOG3128|consen 125 KNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSA---GIGDIIEEVTRQKLVLH 179 (298)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEec---chHHHHHHHHHHHhccC
Confidence 45666666666678999999999999999999999999 556677766654 4443
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.66 E-value=0.83 Score=43.88 Aligned_cols=31 Identities=10% Similarity=-0.095 Sum_probs=22.9
Q ss_pred HHHHHHHcCCCCC---cEEEEcCChhhHHHHHHc
Q 020675 283 LRAGAEYAEKPVR---NCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 283 ~~~al~~lgv~p~---~~v~VGDs~~Di~aA~~a 313 (323)
.+.+++.++..-. =.+||||-.+|-.+.+.+
T Consensus 274 v~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L 307 (354)
T PLN02151 274 LEFLLESLGYANCTDVFPIYIGDDRTDEDAFKIL 307 (354)
T ss_pred HHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHH
Confidence 6777888876532 279999999887776644
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.04 E-value=0.2 Score=43.40 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.6
Q ss_pred CceEEEEecCCccccc
Q 020675 83 RDLAVLLEVDGVLVDA 98 (323)
Q Consensus 83 ~~kaViFD~DGTLid~ 98 (323)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999986
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.42 E-value=1.2 Score=41.02 Aligned_cols=32 Identities=3% Similarity=-0.105 Sum_probs=23.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
++.++++.+....-+++.||-..|=.+...+.
T Consensus 187 ~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 187 IKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 67778888776666899999988766665554
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=87.93 E-value=0.59 Score=42.38 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=24.3
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHH---cCCC
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK---LGLD 117 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~---~g~~ 117 (323)
.|.+|.|+||+||||++.... ......+++++ .|+.
T Consensus 2 ~~~~klia~DlDGTLL~~~~~-is~~~~~ai~~l~~~Gi~ 40 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPRNP-ITQEMKDTLAKLKSKGFK 40 (247)
T ss_pred CCCCeEEEEECcCCCcCCCCC-CCHHHHHHHHHHHHCCCE
Confidence 477999999999999987653 33334444433 4554
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=87.82 E-value=1.1 Score=41.22 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f 207 (323)
+.+.++|+.|+++|++++++|+ .....+...++.+|+..++
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTg---R~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTS---KTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCCE
Confidence 4567788999999999999999 4567788899999987644
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.59 E-value=1.1 Score=43.38 Aligned_cols=122 Identities=11% Similarity=-0.013 Sum_probs=68.3
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH---cCCCccccceeechhhhhhhhhcccccccccccCcchhHHHH
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK---LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~---lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 242 (323)
...+|..+++.|-++-++||+ ...++...+.. .++..+|+++++.+.-- .-...+.++ ...++.
T Consensus 203 ~v~~l~~~r~sGKk~fl~Tns---~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp-~ff~e~~vl-----reV~t~---- 269 (424)
T KOG2469|consen 203 IVPLLSMLRDSGKKTFLHTNS---DWDYTDIFMAFHYGFDWETYFDLVETRAAKP-GFFHEGTVL-----REVEPQ---- 269 (424)
T ss_pred cccchHHHHhhccceEEeecc---ccchhhHHHHHHhCCCcceeEEEEEEeccCC-cccccccee-----eeeccc----
Confidence 344899999999999999994 34444444433 46889999876654211 000011100 000000
Q ss_pred HHHHhhHHHHHHHHHHHhhcCCCccccCCC----CchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh-hH-HHHHHcCCC
Q 020675 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTSS----PESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GV-AGAQRIGMP 316 (323)
Q Consensus 243 ~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~----~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~-Di-~aA~~aG~~ 316 (323)
..||.+..+++. ..++-+. ...+++.+++.-.++++|||... || ..-+.-|++
T Consensus 270 ------------------~g~l~~g~~~~p~e~~~~ySggs---~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wr 328 (424)
T KOG2469|consen 270 ------------------EGLLKNGDNTGPLEQGGVYSGGS---LKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWR 328 (424)
T ss_pred ------------------cccccccccCCcchhcccCCcch---HHHHHHHhcccccceeecccceeeeEEecceecceE
Confidence 012222211110 0111111 56778888888899999999864 64 445667888
Q ss_pred EEEEc
Q 020675 317 CVVMR 321 (323)
Q Consensus 317 ~v~v~ 321 (323)
+++|.
T Consensus 329 t~lv~ 333 (424)
T KOG2469|consen 329 TVLVA 333 (424)
T ss_pred EEEEe
Confidence 88764
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=86.86 E-value=0.72 Score=41.87 Aligned_cols=30 Identities=13% Similarity=0.202 Sum_probs=19.4
Q ss_pred CceEEE-EecCCccccccccchHHHHHHHHHH
Q 020675 83 RDLAVL-LEVDGVLVDAYRFGNRQAFNVAFQK 113 (323)
Q Consensus 83 ~~kaVi-FD~DGTLid~~~~~~~~a~~~~~~~ 113 (323)
.+|+++ |||||||++.... ......+++++
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~~ 35 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKE-ATPEMLEFMKE 35 (245)
T ss_pred ccceEEEEeccCCCcCCCCc-CCHHHHHHHHH
Confidence 456555 9999999987653 33444454444
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=85.86 E-value=1.8 Score=46.47 Aligned_cols=28 Identities=11% Similarity=-0.092 Sum_probs=24.9
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 287 AEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 287 l~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
++.+|+.++.+++|||..+|..|.+.++
T Consensus 774 ~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 774 MQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 3567999999999999999999998876
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.73 E-value=3.6 Score=33.58 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=39.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+..+++++..|.+|++.|+.++++|++. ....+...|+.+.+...+.
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~--ap~iA~q~L~~fkvk~~Gv 89 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTM--APQIASQGLETFKVKQTGV 89 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCC--CHHHHHHHHHHhccCcccc
Confidence 4478899999999999999999999963 4688889999888765443
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=84.80 E-value=5.7 Score=37.51 Aligned_cols=43 Identities=28% Similarity=0.363 Sum_probs=31.2
Q ss_pred CChhHHHHHHHHHHC----CCcEEEEcCCCCCChHH-HHHHHHHcCCC
Q 020675 162 LRPGVEDFVDDAYNE----GIPLIVLTAYGKSGDRI-ARSVVEKLGSE 204 (323)
Q Consensus 162 l~pgv~elL~~Lk~~----Gi~l~ivTn~~~~~~~~-~~~~l~~lgl~ 204 (323)
+.||+.++++.|+.+ |+++.++||.+...... +..+.+.+|++
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 477889999999988 99999999954222333 44444778875
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
Probab=84.68 E-value=2.4 Score=36.37 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=22.9
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 287 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 287 l~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
+..-|++ ++||++.. ...|++.|++++.+.+|
T Consensus 121 ~~~~G~~----viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 121 AKAEGVD----VIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp HHHTT------EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred HHHcCCc----EEECCHHH-HHHHHHcCCcEEEEEec
Confidence 3445654 88999865 78899999999998764
|
Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.55 E-value=1.7 Score=45.78 Aligned_cols=153 Identities=13% Similarity=0.129 Sum_probs=77.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceee-chhhhhhhhhcccccccccc---cCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV-GNEEVERSLYGQFVLGKGIS---SGV 235 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~-s~~~~~~~~~~~~~~g~~v~---~~~ 235 (323)
.++.|++++.|+.|.+.+++++.+|+ .+.-.+..+-+.+|+-.--..++. ..++..+...+.-+.|..+. .+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITG---DnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~ 750 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITG---DNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGK 750 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeC---CCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCc
Confidence 67899999999999999999999998 455556666666776332111111 11101111111111111110 000
Q ss_pred ch--hHHHHHHHHhhHHHHH-HHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 236 DE--QLATEARKAVSAQKQE-IAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 236 ~~--~~~~~~~k~~s~~~~~-i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
.. ...+-+.+-.+..-.. .........=|+..+|.. .|+-+|.++. -++.+| ..++|.||+.||+-|.+
T Consensus 751 ~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~----tlK~~G---y~TLMCGDGTNDVGALK 823 (1160)
T KOG0209|consen 751 KKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIIT----TLKKLG---YVTLMCGDGTNDVGALK 823 (1160)
T ss_pred cchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHH----HHHhcC---eEEEEecCCCcchhhhh
Confidence 00 0000000000000000 000111223455555442 2555555543 345666 45899999999999999
Q ss_pred HcCCCEEEEcC
Q 020675 312 RIGMPCVVMRS 322 (323)
Q Consensus 312 ~aG~~~v~v~~ 322 (323)
.|...+.++.+
T Consensus 824 ~AhVGVALL~~ 834 (1160)
T KOG0209|consen 824 QAHVGVALLNN 834 (1160)
T ss_pred hcccceehhcC
Confidence 99998877654
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=84.41 E-value=0.5 Score=36.82 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=19.0
Q ss_pred EEEecCCcccccccc-chHHHHHHHHHHcCCC
Q 020675 87 VLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLD 117 (323)
Q Consensus 87 ViFD~DGTLid~~~~-~~~~a~~~~~~~~g~~ 117 (323)
++||+||||++.... .....+-+.+++.|.+
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~ 32 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKP 32 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSE
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCC
Confidence 689999999986543 1122333445555664
|
... |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=84.18 E-value=2.3 Score=37.46 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=30.8
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.+++|+.|+++|++++++|+ .....+..+++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~Tg---R~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTS---KTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCC
Confidence 45678889999999999999 5678888899999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=83.35 E-value=2.4 Score=37.28 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=32.6
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
.|...+.|++|+++|++++++|+. +...+..+.+.++++.+
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR---~~~~~~~~~~~l~~~~~ 60 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGN---TVPFARALAVLIGTSGP 60 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCC---cchhHHHHHHHhCCCCc
Confidence 346677889999999999999994 45677788888887643
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR | Back alignment and domain information |
|---|
Probab=81.09 E-value=14 Score=37.61 Aligned_cols=32 Identities=13% Similarity=0.054 Sum_probs=25.2
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 287 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 287 l~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++..|++ ++|||... ...|+++||+.|++.++
T Consensus 141 l~~~G~~----~viG~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 141 LRARGIG----AVVGAGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHCCCC----EEECChHH-HHHHHHcCCceEEEecH
Confidence 4556664 78899955 67899999999998763
|
At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.95 E-value=3.3 Score=36.50 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
|...+.|++|+++|++++++|++ +...+..+++.+++..+
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~~ 62 (230)
T PRK01158 23 LKAVEAIRKAEKLGIPVILATGN---VLCFARAAAKLIGTSGP 62 (230)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHhCCCCc
Confidence 35566788899999999999994 45667777888888653
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=80.53 E-value=3.7 Score=37.08 Aligned_cols=38 Identities=13% Similarity=0.329 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...+.|++|+++|++++++|+. ....+...++.+++..
T Consensus 20 ~~~~~i~~l~~~G~~~~iaTGR---~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 20 STKEALAKLREKGIKVVLATGR---PYKEVKNILKELGLDT 57 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCCC
Confidence 4566788899999999999994 4567777888888763
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.02 E-value=4.4 Score=36.79 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...+.|++|+++|++++++|++ +...+..+++.++++.
T Consensus 24 ~~~~ai~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 24 AVKQAIAAARAKGVNVVLTTGR---PYAGVHRYLKELHMEQ 61 (270)
T ss_pred HHHHHHHHHHHCCCEEEEecCC---ChHHHHHHHHHhCCCC
Confidence 3456788899999999999994 4566777888888864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 323 | |||
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 4e-10 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 1e-09 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 2e-09 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 9e-08 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 1e-07 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 2e-07 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 4e-07 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 5e-07 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 8e-07 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 7e-06 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 2e-05 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 2e-05 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 3e-05 |
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 4e-10
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 17/152 (11%)
Query: 80 NPPRDL-AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW---------TAPIYTDL 129
+ PR + A + ++DG+L+D+ +A LG+D + + DL
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPLW-DRAELDVMASLGVDISRRNELPDTLGLRIDMVVDL 62
Query: 130 LRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS 189
R A L + PL PGV + V +G+ + + +A S
Sbjct: 63 WYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASA---S 119
Query: 190 GDRIARSVVEKLG-SERISKIKIVGNEEVERS 220
+ V+ + + E++ S
Sbjct: 120 PLHMLEKVLTMFDLRDSFD--ALASAEKLPYS 149
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 56.9 bits (137), Expect = 1e-09
Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 23/155 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGL-----DCANWTAPIYTDLLRKSAGDE--- 137
A++L+ G +D AF F++ G+ + ++ +R+ G+
Sbjct: 16 ALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIA 75
Query: 138 ------------DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTA 185
+ + ++ + + ++ + L PG ++ D +GI + T
Sbjct: 76 NAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTG 135
Query: 186 YGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
YG + + + + V +V R
Sbjct: 136 YGP---GMMAPALIAAKEQGYTPASTVFATDVVRG 167
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 9e-08
Identities = 16/151 (10%), Positives = 49/151 (32%), Gaps = 29/151 (19%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
A++ ++DGVL D ++ + G+ + + + ++
Sbjct: 7 AIIFDMDGVLFDTEKYY-YDRRASFLGQKGIS---IDHLPPSFFIGGNTKQVWENILRDE 62
Query: 146 NRKNALDEFLASKDA-----------PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA 194
K + + + P V +++ ++G+ + + ++ S
Sbjct: 63 YDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASS---SVKADI 119
Query: 195 RSVVEKLGSERISKIK-----IVGNEEVERS 220
+E+ ++ ++ EE + S
Sbjct: 120 FRALEENR------LQGFFDIVLSGEEFKES 144
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 1e-07
Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 23/155 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGL-----DCANWTAPIYTDLLRKSAGDE--- 137
AV+ G VD F + F F K G+ + + D +R
Sbjct: 8 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIA 67
Query: 138 ------------DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTA 185
+ + + + + + A GV++ + GI + T
Sbjct: 68 SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 127
Query: 186 YGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
Y + V ++ + +V ++V
Sbjct: 128 Y---TREMMDIVAKEAALQGYKPDFLVTPDDVPAG 159
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 34/164 (20%), Positives = 64/164 (39%), Gaps = 24/164 (14%)
Query: 75 GHDSQNPPRDL-------AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW------ 121
H S PR AVL ++DGVL ++ + + +A++ + GLD +
Sbjct: 8 HHSSGLVPRGSHMRKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLDLSREEAYMHE 66
Query: 122 ---TAPIYTDLLRKSAGDE--DRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNE 176
A + ++ G E + ++ K+ L F + +A PG + + +E
Sbjct: 67 GRTGASTINIVFQRELGKEATQEEIESIYHEKSIL--FNSYPEAERMPGAWELLQKVKSE 124
Query: 177 GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 220
G+ +V+T SG +E K +V +V+
Sbjct: 125 GLTPMVVTG---SGQLSLLERLEHNFPGMFHKELMVTAFDVKYG 165
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 4e-07
Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 25/150 (16%)
Query: 86 AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV 142
AVL ++DGVL D + ++++ ++ G + ++ ++
Sbjct: 25 AVLFDMDGVLFDSMPNHA----ESWHKIMKRFGFG---LSREEAYMHEGRTGASTINIVS 77
Query: 143 LFFNRKNALDEFLASK------------DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG 190
+A +E + + A PG + + +EG+ +V+T SG
Sbjct: 78 RRERGHDATEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTG---SG 134
Query: 191 DRIARSVVEKLGSERISKIKIVGNEEVERS 220
+ +V +V+
Sbjct: 135 QTSLLDRLNHNFPGIFQANLMVTAFDVKYG 164
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 25/155 (16%)
Query: 81 PPRDL-AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD 136
PP+ + ++ ++DG+L+D Y F + ++ + + ++ K A +
Sbjct: 26 PPQPVTHLIFDMDGLLLDTERLYS----VVFQEICNRYDKK---YSWDVKSLVMGKKALE 78
Query: 137 EDRMLVLFFNRKNALDEFLASKD---------APLRPGVEDFVDDAYNEGIPLIVLTAYG 187
++++ + +E + A L PG E + GIP + T+
Sbjct: 79 AAQIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATS-- 136
Query: 188 KSGDRIARSVVEKLGS--ERISKIKIVGNEEVERS 220
S + S I + + EV+
Sbjct: 137 -SRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG 170
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 8e-07
Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 18/146 (12%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW---------TAPIYTDLLRKSAGD 136
+ + ++DG L D+ N A+ A + A W + L R++
Sbjct: 8 SFIFDLDGTLTDSVYQ-NVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMS 66
Query: 137 -EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR 195
D + E L + L PG + ++ E + + T+ G A
Sbjct: 67 ITDEQAERLSEKHAQAYERLQHQIIAL-PGAVELLETLDKENLKWCIATS---GGIDTAT 122
Query: 196 SVVEKLG-SERISKIKIVGNEEVERS 220
++ L IV ++V
Sbjct: 123 INLKALKLDINKI--NIVTRDDVSYG 146
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 7e-06
Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 13/140 (9%)
Query: 86 AVLLEVDGVLVD-AYRFGNRQAFNVAFQKLGL---DCANWTAPIYTDLLRKSAGDE-DRM 140
AV+ + L+D + R F ++G D + L G
Sbjct: 27 AVIFDWYNTLIDTSINID-RTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKEA 85
Query: 141 LVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200
+L+ N +L++ S + L G + +D I + +++ K+G+R RS +
Sbjct: 86 TILYEN---SLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVS--NKNGER-LRSEIHH 139
Query: 201 LGSERISKIKIVGNEEVERS 220
I+G+ +
Sbjct: 140 KNLTHYFDS-IIGSGDTGTI 158
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 29/153 (18%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
V+ ++DGV+ D QA+ ++G+ A L S + R ++
Sbjct: 7 GVIFDLDGVITDTAHLH-FQAWQQIAAEIGIS---IDAQFNESLKGISRDESLRRILQHG 62
Query: 146 N---------------RKNAL--DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGK 188
RKN L + PG+ + D + I + + +
Sbjct: 63 GKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASV--- 119
Query: 189 SGDRIARSVVEKLG-SERISKIKIVGNEEVERS 220
S A +++ L E + +++ S
Sbjct: 120 S--LNAPTILAALELREFFT--FCADASQLKNS 148
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 2e-05
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 22/149 (14%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTD---------LLRKSAGD 136
AVL ++DGV+ D + +A+ +++G++ + + A
Sbjct: 4 AVLFDLDGVITDTAEYH-FRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 62
Query: 137 E--DRMLVLFFNRKNA--LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDR 192
+ RKN + A + PG+ + D + I + + +A S +
Sbjct: 63 KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA---S--K 117
Query: 193 IARSVVEKLG-SERISKIKIVGNEEVERS 220
++E++ + I EV S
Sbjct: 118 NGPFLLERMNLTGYFD--AIADPAEVAAS 144
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 29/153 (18%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AV+ ++DGV+ D + A+ +++ + + + L S + +++F
Sbjct: 4 AVIFDLDGVITDTAEYH-FLAWKHIAEQIDIP---FDRDMNERLKGISREESLESILIFG 59
Query: 146 N---------------RKNALDEFLASKDAP--LRPGVEDFVDDAYNEGIPLIVLTAYGK 188
RKN + L SK P L PG+ + NE I + + ++
Sbjct: 60 GAETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS--- 116
Query: 189 SGDRIARSVVEKLG-SERISKIKIVGNEEVERS 220
R A ++ +L + IV + +
Sbjct: 117 --SRNAPKILRRLAIIDDFH--AIVDPTTLAKG 145
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 3e-05
Identities = 42/300 (14%), Positives = 92/300 (30%), Gaps = 80/300 (26%)
Query: 10 LLNSLRFSTAITVSKKSYYHYQATQLRNHNCLSPFPSFSSTFPRNYNFHGKCLHVNPFSA 69
L++ ++ Y Q +L N N F ++ + + Y + L
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--QVFAKYNVSRLQPYLKLRQALL------ 145
Query: 70 FSSSSGHDSQNPPRDLAVLLEVDG-------VLV----DAYRFGNRQAFNVAFQKLG-LD 117
P +++ + DG + +Y+ + F + + L +
Sbjct: 146 --------ELRPAKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 118 CANWTAPIYTDLLRKSAGD----EDRMLVLFFNR---KNALDEFLASKDAP-----LRPG 165
+ LL + + D + + L L SK L
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-N 252
Query: 166 VEDF-VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224
V++ +A+N +++ T + + V + L + + I + + +L
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRF--------KQVTDFLSAATTTHISL---DHHSMTLT-- 299
Query: 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR 284
DE + K + + Q++ EV T++P L I ++R
Sbjct: 300 ----------PDEVKSLLL-KYLDCRPQDLPREV----------LTTNPRRLSIIAESIR 338
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 3e-05
Identities = 23/172 (13%), Positives = 45/172 (26%), Gaps = 27/172 (15%)
Query: 63 HVNPFSAFSSSSGHDSQNPPRDL---AVLLEVDGVLVD---AYRFGNRQAFNVAFQKLGL 116
++ A + P L A L +VDG ++ A + +
Sbjct: 11 YIRTTKANIQTIAMPLTTKPLSLKINAALFDVDGTIIISQPAI----AAFWRDFGKDKPY 66
Query: 117 DCANWTAPIYTDLLRKSAGD------EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFV 170
+ D D + N+ + + PG
Sbjct: 67 F---DAEHVIHISHGWRTYDAIAKFAPDFADEEYVNKLEGEIPEKYGEHSIEVPGAVKLC 123
Query: 171 DDAYNEGI-PLIVLTAYGKSGDR-IARSVVEKLGSERISKIKIVGNEEVERS 220
+ V T SG R +A+ + L +R + +V++
Sbjct: 124 NALNALPKEKWAVAT----SGTRDMAKKWFDILKIKRPE--YFITANDVKQG 169
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.96 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.95 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.95 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.94 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.94 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.94 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.93 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.93 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.93 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.93 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.93 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.93 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.92 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.92 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.92 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.92 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.92 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.92 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.92 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.92 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.92 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.92 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.91 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.91 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.91 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.91 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.91 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.91 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.9 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.9 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.9 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.9 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.9 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.9 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.9 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.9 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.9 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.9 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.9 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.89 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.89 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.89 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.89 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.89 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.89 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.89 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.89 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.88 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.88 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.88 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.88 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.87 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.87 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.87 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.87 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.86 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.86 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.86 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.86 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.86 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.86 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.86 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.86 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.84 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.83 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.83 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.82 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.81 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.81 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.8 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.8 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.79 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.79 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.78 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.78 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.78 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.76 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.76 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.75 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.75 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.75 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.74 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.73 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.72 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.71 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.71 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.69 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.69 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.69 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.69 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.68 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.67 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.65 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.65 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.64 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.64 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.62 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.61 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.6 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.6 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.6 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.57 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.57 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.56 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.56 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.53 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.53 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.28 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.5 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.5 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.45 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.39 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.39 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.35 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.34 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.3 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.25 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.21 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.2 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.18 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.17 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.16 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.12 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.1 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.06 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.03 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.02 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.02 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.94 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.92 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.87 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.81 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.76 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.73 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.66 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.64 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.59 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.58 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.3 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.14 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.96 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 97.95 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.81 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.8 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.76 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 97.73 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.44 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.41 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.39 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.35 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 97.3 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.26 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.25 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.14 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.13 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 96.77 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.69 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.55 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 96.2 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 95.85 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.75 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 95.46 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.31 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 94.03 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 93.92 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 93.83 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 93.6 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 93.18 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 91.38 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 90.77 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 90.74 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 87.57 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 84.84 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 84.4 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 83.93 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 81.87 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-30 Score=223.59 Aligned_cols=175 Identities=19% Similarity=0.232 Sum_probs=135.4
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH----------hH-HHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF----------NR-KNALD 152 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~ 152 (323)
+||||||+||||+|+... +..+++++++++|++ ++++.+..+.+.............. .. .+.+.
T Consensus 1 IkAViFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPL-YFEAYRRVAESYGKP---YTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKK 76 (216)
T ss_dssp CCEEEEESBTTTBCCGGG-HHHHHHHHHHHTTCC---CCHHHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHH
Confidence 589999999999999986 899999999999997 5677766665543211111110000 00 11222
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 153 ~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
... ....+++||+.++|+.|+++|++++++|| +....+...++.+|+.++|+.+ ++++++.
T Consensus 77 ~~~-~~~~~~~pg~~~~l~~L~~~g~~~~i~tn---~~~~~~~~~l~~~~l~~~fd~~-~~~~~~~-------------- 137 (216)
T 3kbb_A 77 RVF-SELLKENPGVREALEFVKSKRIKLALATS---TPQREALERLRRLDLEKYFDVM-VFGDQVK-------------- 137 (216)
T ss_dssp HHH-HHHCCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEE-ECGGGSS--------------
T ss_pred HHH-HHhcccCccHHHHHHHHHHcCCCcccccC---CcHHHHHHHHHhcCCCcccccc-ccccccC--------------
Confidence 211 22356899999999999999999999999 6778899999999999999985 4444442
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
..||+|++ |+.+++++|++|++|+||||+.+|+.+|++
T Consensus 138 ----------------------------~~KP~p~~--------------~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~ 175 (216)
T 3kbb_A 138 ----------------------------NGKPDPEI--------------YLLVLERLNVVPEKVVVFEDSKSGVEAAKS 175 (216)
T ss_dssp ----------------------------SCTTSTHH--------------HHHHHHHHTCCGGGEEEEECSHHHHHHHHH
T ss_pred ----------------------------CCcccHHH--------------HHHHHHhhCCCccceEEEecCHHHHHHHHH
Confidence 24999999 999999999999999999999999999999
Q ss_pred cCCCEEE-EcCC
Q 020675 313 IGMPCVV-MRSR 323 (323)
Q Consensus 313 aG~~~v~-v~~g 323 (323)
+||++|+ |.+|
T Consensus 176 aG~~~i~~v~~g 187 (216)
T 3kbb_A 176 AGIERIYGVVHS 187 (216)
T ss_dssp TTCCCEEEECCS
T ss_pred cCCcEEEEecCC
Confidence 9999985 6553
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-30 Score=231.08 Aligned_cols=177 Identities=17% Similarity=0.234 Sum_probs=132.2
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCc----------------HHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD----------------EDRMLVLF 144 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 144 (323)
.|++|+||||+||||+|+... +..+|+++++++|++. +.+.+..+.+..... ........
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHL-HFQAWQQIAAEIGISI---DAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLA 77 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCC---CTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHH
T ss_pred CccCcEEEEcCCCcccCCHHH-HHHHHHHHHHHcCCCC---CHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHH
Confidence 588999999999999999986 8999999999999874 322222222211100 01111111
Q ss_pred HhHHHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhc
Q 020675 145 FNRKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223 (323)
Q Consensus 145 ~~~~~~~~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~ 223 (323)
......+.+.+.. ....++||+.++++.|+++|++++++||+ .....+++.+|+..+|+.+ ++++++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~-----~~~~~~l~~~gl~~~fd~i-~~~~~~~~---- 147 (243)
T 4g9b_A 78 YRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVS-----LNAPTILAALELREFFTFC-ADASQLKN---- 147 (243)
T ss_dssp HHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCC-----TTHHHHHHHTTCGGGCSEE-CCGGGCSS----
T ss_pred HHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccc-----cchhhhhhhhhhccccccc-cccccccC----
Confidence 1112223333322 23458999999999999999999999994 2356789999999999975 55555432
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
.||+|++ |+.+++++|++|++|+||||+
T Consensus 148 --------------------------------------~KP~p~~--------------~~~a~~~lg~~p~e~l~VgDs 175 (243)
T 4g9b_A 148 --------------------------------------SKPDPEI--------------FLAACAGLGVPPQACIGIEDA 175 (243)
T ss_dssp --------------------------------------CTTSTHH--------------HHHHHHHHTSCGGGEEEEESS
T ss_pred --------------------------------------CCCcHHH--------------HHHHHHHcCCChHHEEEEcCC
Confidence 3999999 999999999999999999999
Q ss_pred hhhHHHHHHcCCCEEEEcCC
Q 020675 304 QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~~g 323 (323)
.+||++|+++||++|+|.+|
T Consensus 176 ~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 176 QAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp HHHHHHHHHHTCEEEEESTT
T ss_pred HHHHHHHHHcCCEEEEECCC
Confidence 99999999999999999875
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=218.28 Aligned_cols=173 Identities=18% Similarity=0.238 Sum_probs=127.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccC---------------CcHHHHHHHHHh-H
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA---------------GDEDRMLVLFFN-R 147 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-~ 147 (323)
+|+||||+||||+|+... +..+|+++++++|++. +.+....+.+... ............ .
T Consensus 26 IKaViFDlDGTLvDs~~~-~~~a~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (250)
T 4gib_A 26 IEAFIFDLDGVITDTAYY-HYMAWRKLAHKVGIDI---DTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEK 101 (250)
T ss_dssp CCEEEECTBTTTBCCHHH-HHHHHHHHHHTTTCCC---CTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHH
T ss_pred hheeeecCCCcccCCHHH-HHHHHHHHHHHcCCCC---CHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHH
Confidence 899999999999999986 8899999999999874 2222211111110 000111111111 1
Q ss_pred HHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccc
Q 020675 148 KNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 148 ~~~~~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~ 226 (323)
...+.+.... ...+++||+.++++.|+++|++++++|++ ..+...++.+|+.++|+.+ ++++++..
T Consensus 102 ~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~-----~~~~~~L~~~gl~~~Fd~i-~~~~~~~~------- 168 (250)
T 4gib_A 102 NNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS-----KNAINVLNHLGISDKFDFI-ADAGKCKN------- 168 (250)
T ss_dssp HHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHHTCGGGCSEE-CCGGGCCS-------
T ss_pred HHHHHHHHhhccccccchhHHHHHHHHHhccccccccccc-----chhhhHhhhccccccccee-ecccccCC-------
Confidence 2233333222 23558999999999999999999988773 2356789999999999985 55555432
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
.||+|++ |+.+++++|++|++|+||||+.+|
T Consensus 169 -----------------------------------~KP~p~~--------------~~~a~~~lg~~p~e~l~VGDs~~D 199 (250)
T 4gib_A 169 -----------------------------------NKPHPEI--------------FLMSAKGLNVNPQNCIGIEDASAG 199 (250)
T ss_dssp -----------------------------------CTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHH
T ss_pred -----------------------------------CCCcHHH--------------HHHHHHHhCCChHHeEEECCCHHH
Confidence 3999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcC
Q 020675 307 VAGAQRIGMPCVVMRS 322 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~ 322 (323)
+++|+++||.+|+|.+
T Consensus 200 i~aA~~aG~~~i~v~~ 215 (250)
T 4gib_A 200 IDAINSANMFSVGVGN 215 (250)
T ss_dssp HHHHHHTTCEEEEESC
T ss_pred HHHHHHcCCEEEEECC
Confidence 9999999999999964
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=209.69 Aligned_cols=173 Identities=16% Similarity=0.255 Sum_probs=130.6
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH------hHHHHHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF------NRKNALDEFL 155 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i 155 (323)
|++|+|+||+||||+|+... +..+++++++++|++. ...+.+..+.+.. ........+ ...+.+.+..
T Consensus 2 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFMGPP---LESSFATCLSKDQISEAVQIYRSYY 75 (210)
T ss_dssp TTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTSSSC---HHHHHHTTSCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHcCcc---HHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 56899999999999999885 8899999999999863 3344444333321 111111000 0011222211
Q ss_pred h---cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 156 A---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 156 ~---~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
. .....++||+.++|+.|++ |++++|+|| +....++..++.+|+..+|+.++ +++ ..
T Consensus 76 ~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~---~~~~~~~~~l~~~gl~~~f~~i~-~~~--~~------------- 135 (210)
T 2ah5_A 76 KAKGIYEAQLFPQIIDLLEELSS-SYPLYITTT---KDTSTAQDMAKNLEIHHFFDGIY-GSS--PE------------- 135 (210)
T ss_dssp HHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEE---EEHHHHHHHHHHTTCGGGCSEEE-EEC--SS-------------
T ss_pred HHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeC---CCHHHHHHHHHhcCchhheeeee-cCC--CC-------------
Confidence 1 1235689999999999999 999999999 56778889999999999999754 333 11
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
.||+|++ |+.+++++|++|++|++|||+.+|+++|++
T Consensus 136 -----------------------------~Kp~p~~--------------~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~ 172 (210)
T 2ah5_A 136 -----------------------------APHKADV--------------IHQALQTHQLAPEQAIIIGDTKFDMLGARE 172 (210)
T ss_dssp -----------------------------CCSHHHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred -----------------------------CCCChHH--------------HHHHHHHcCCCcccEEEECCCHHHHHHHHH
Confidence 2999999 999999999999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+||++|+|.+|
T Consensus 173 aG~~~i~v~~~ 183 (210)
T 2ah5_A 173 TGIQKLAITWG 183 (210)
T ss_dssp HTCEEEEESSS
T ss_pred CCCcEEEEcCC
Confidence 99999999764
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.94 E-value=9e-27 Score=207.81 Aligned_cols=175 Identities=17% Similarity=0.220 Sum_probs=132.0
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCC-CCCCCHHHHHHHHcccCCcHHHHHHHHH---------------
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD-CANWTAPIYTDLLRKSAGDEDRMLVLFF--------------- 145 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 145 (323)
|.+|+|+||+||||+|+... +..++.++++++|++ . .+.+.+....+.. .........
T Consensus 2 M~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~ 75 (240)
T 2hi0_A 2 MKYKAAIFDMDGTILDTSAD-LTSALNYAFEQTGHRHD--FTVEDIKNFFGSG---VVVAVTRALAYEAGSSRESLVAFG 75 (240)
T ss_dssp CSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTSCCC--CCHHHHHHHCSSC---HHHHHHHHHHHHTTCCHHHHTTTT
T ss_pred CcccEEEEecCCCCccCHHH-HHHHHHHHHHHcCCCCC--CCHHHHHHhcCcc---HHHHHHHHHHhccccccccccccc
Confidence 45789999999999999986 889999999999986 2 3444444443321 111100000
Q ss_pred ----------------hHHHHHHHHHh---cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 146 ----------------NRKNALDEFLA---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 146 ----------------~~~~~~~~~i~---~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
...+.+.+.+. ....+++||+.++|+.|+++|++++|+|| +....++..++.+|+. +
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~-~ 151 (240)
T 2hi0_A 76 TKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSN---KPNEAVQVLVEELFPG-S 151 (240)
T ss_dssp STTCCCCTTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHSTT-T
T ss_pred ccccccCCCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCc-c
Confidence 00112222211 23467899999999999999999999999 5677889999999998 9
Q ss_pred ccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHH
Q 020675 207 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 286 (323)
Q Consensus 207 fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~a 286 (323)
|+.+ ++++++. ..||+|++ |+.+
T Consensus 152 f~~~-~~~~~~~------------------------------------------~~Kp~p~~--------------~~~~ 174 (240)
T 2hi0_A 152 FDFA-LGEKSGI------------------------------------------RRKPAPDM--------------TSEC 174 (240)
T ss_dssp CSEE-EEECTTS------------------------------------------CCTTSSHH--------------HHHH
T ss_pred eeEE-EecCCCC------------------------------------------CCCCCHHH--------------HHHH
Confidence 9874 4444332 23999999 9999
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 287 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 287 l~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++++|++|++|++|||+.+|+.+|+++||.+|+|.++
T Consensus 175 ~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~ 211 (240)
T 2hi0_A 175 VKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG 211 (240)
T ss_dssp HHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS
T ss_pred HHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence 9999999999999999999999999999999999764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=196.57 Aligned_cols=178 Identities=12% Similarity=0.145 Sum_probs=132.4
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH-------hHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF-------NRKNALDE 153 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 153 (323)
+|.+|+|+||+||||+|+... +..++.++++++|... ..+.+....+.......+...... ...+.+.+
T Consensus 2 ~~m~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (214)
T 3e58_A 2 NAMVEAIIFDMDGVLFDTEKY-YYDRRASFLGQKGISI---DHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNT 77 (214)
T ss_dssp --CCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCC---TTSCHHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHH
T ss_pred CccccEEEEcCCCCccccHHH-HHHHHHHHHHHcCCCC---CHHHHHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 355899999999999999885 8899999999999863 333333333332222111111100 00122222
Q ss_pred HHhcC----CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 154 FLASK----DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 154 ~i~~~----~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
..... ...++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+.+ +++++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~----------- 142 (214)
T 3e58_A 78 YKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASS---SVKADIFRALEENRLQGFFDIV-LSGEEFK----------- 142 (214)
T ss_dssp HHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEE-EEGGGCS-----------
T ss_pred HHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeC---CcHHHHHHHHHHcCcHhheeeE-eeccccc-----------
Confidence 22211 235899999999999999999999999 5678899999999999999975 4444332
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+
T Consensus 143 -------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~ 177 (214)
T 3e58_A 143 -------------------------------ESKPNPEI--------------YLTALKQLNVQASRALIIEDSEKGIAA 177 (214)
T ss_dssp -------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEEEECSHHHHHH
T ss_pred -------------------------------CCCCChHH--------------HHHHHHHcCCChHHeEEEeccHhhHHH
Confidence 23999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEEcC
Q 020675 310 AQRIGMPCVVMRS 322 (323)
Q Consensus 310 A~~aG~~~v~v~~ 322 (323)
|+++|+.++++.+
T Consensus 178 a~~aG~~~~~~~~ 190 (214)
T 3e58_A 178 GVAADVEVWAIRD 190 (214)
T ss_dssp HHHTTCEEEEECC
T ss_pred HHHCCCEEEEECC
Confidence 9999999999975
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8e-26 Score=199.64 Aligned_cols=179 Identities=18% Similarity=0.220 Sum_probs=135.9
Q ss_pred CCCCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH------------
Q 020675 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF------------ 145 (323)
Q Consensus 78 ~~~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 145 (323)
....+.+|+|+||+||||+|+... +..++.++++++|.. +..+.+....+... ........
T Consensus 13 ~~~~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~ 85 (237)
T 4ex6_A 13 GAPAAADRGVILDLDGTLADTPAA-IATITAEVLAAMGTA---VSRGAILSTVGRPL---PASLAGLLGVPVEDPRVAEA 85 (237)
T ss_dssp ----CCCEEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTTSCH---HHHHHHHHTSCTTSHHHHHH
T ss_pred CCCcccCCEEEEcCCCCCcCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCccH---HHHHHHHhCCCCCHHHHHHH
Confidence 445678999999999999999885 889999999999933 55555555544321 11111111
Q ss_pred -h-HHHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhh
Q 020675 146 -N-RKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222 (323)
Q Consensus 146 -~-~~~~~~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~ 222 (323)
. ..+.+.+.+.. ....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.+ ++++++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~~--- 158 (237)
T 4ex6_A 86 TEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATS---KVEKAARAIAELTGLDTRLTVI-AGDDSVER--- 158 (237)
T ss_dssp HHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECS---SCHHHHHHHHHHHTGGGTCSEE-ECTTTSSS---
T ss_pred HHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcC---CChHHHHHHHHHcCchhheeeE-EeCCCCCC---
Confidence 0 12233333320 3466899999999999999999999999 5678899999999999999975 44444322
Q ss_pred cccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 020675 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (323)
Q Consensus 223 ~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGD 302 (323)
.||+|++ |+.+++++|++|++|++|||
T Consensus 159 ---------------------------------------~kp~~~~--------------~~~~~~~lg~~~~~~i~vGD 185 (237)
T 4ex6_A 159 ---------------------------------------GKPHPDM--------------ALHVARGLGIPPERCVVIGD 185 (237)
T ss_dssp ---------------------------------------CTTSSHH--------------HHHHHHHHTCCGGGEEEEES
T ss_pred ---------------------------------------CCCCHHH--------------HHHHHHHcCCCHHHeEEEcC
Confidence 3999999 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEEcCC
Q 020675 303 SQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 303 s~~Di~aA~~aG~~~v~v~~g 323 (323)
+.+|+.+|+++|+.+|+|.+|
T Consensus 186 ~~~Di~~a~~aG~~~i~v~~g 206 (237)
T 4ex6_A 186 GVPDAEMGRAAGMTVIGVSYG 206 (237)
T ss_dssp SHHHHHHHHHTTCEEEEESSS
T ss_pred CHHHHHHHHHCCCeEEEEecC
Confidence 999999999999999999764
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=201.17 Aligned_cols=177 Identities=17% Similarity=0.149 Sum_probs=134.8
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH---h----------H
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF---N----------R 147 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------~ 147 (323)
.|.+|+|+||+||||+|+... +..++.++++++|+.. ...+.+..+.+.. ......... . .
T Consensus 25 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~ 98 (259)
T 4eek_A 25 DAPFDAVLFDLDGVLVESEGI-IAQVWQSVLAERGLHL--DLTEIAMYFTGQR---FDGVLAYLAQQHDFVPPPDFLDVL 98 (259)
T ss_dssp CCCCSEEEEESBTTTEECHHH-HHHHHHHHHHHTTCCC--CHHHHHHHTTTCC---HHHHHHHHHHHHCCCCCTTHHHHH
T ss_pred hcCCCEEEECCCCCcccCHHH-HHHHHHHHHHHhCCCC--CHHHHHHHHhCCC---HHHHHHHHHHHcCCCCCHHHHHHH
Confidence 357899999999999999885 8899999999999873 1122333333322 111111111 0 0
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
.+.+.+.+ ....++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+..++++++...
T Consensus 99 ~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~-------- 165 (259)
T 4eek_A 99 ETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSN---SERGRLHLKLRVAGLTELAGEHIYDPSWVGG-------- 165 (259)
T ss_dssp HHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECS---SCHHHHHHHHHHTTCHHHHCSCEECGGGGTT--------
T ss_pred HHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHhcChHhhccceEEeHhhcCc--------
Confidence 12223322 4577999999999999999999999999 5678899999999999999973455544430
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+
T Consensus 166 ---------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i~iGD~~~Di 198 (259)
T 4eek_A 166 ---------------------------------RGKPHPDL--------------YTFAAQQLGILPERCVVIEDSVTGG 198 (259)
T ss_dssp ---------------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred ---------------------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 23999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
.+|+++|+.+|+|.+|
T Consensus 199 ~~a~~aG~~~i~v~~g 214 (259)
T 4eek_A 199 AAGLAAGATLWGLLVP 214 (259)
T ss_dssp HHHHHHTCEEEEECCT
T ss_pred HHHHHCCCEEEEEccC
Confidence 9999999999999764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=195.76 Aligned_cols=178 Identities=16% Similarity=0.218 Sum_probs=130.2
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH-HHHHHHHHh----------HHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFN----------RKN 149 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------~~~ 149 (323)
.|.+|+|+||+||||+|+... +..++.++++++|+.. .........+...... .......+. ...
T Consensus 21 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (243)
T 3qxg_A 21 RKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLDL---SREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYH 96 (243)
T ss_dssp -CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCC---CHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred cccCCEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCCC---CHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 456899999999999999885 8899999999999873 3333222222110000 001100000 011
Q ss_pred HHHHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc--cceeechhhhhhhhhcccc
Q 020675 150 ALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 150 ~~~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f--d~~v~s~~~~~~~~~~~~~ 226 (323)
.+.+.... ....++||+.++|+.|+++|++++++|| +....+...++. |+..+| +.+ ++++++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~-~l~~~f~~d~i-~~~~~~~-------- 163 (243)
T 3qxg_A 97 EKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTG---SGQLSLLERLEH-NFPGMFHKELM-VTAFDVK-------- 163 (243)
T ss_dssp HHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECC---CCCHHHHTTHHH-HSTTTCCGGGE-ECTTTCS--------
T ss_pred HHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeC---CcHHHHHHHHHH-hHHHhcCcceE-EeHHhCC--------
Confidence 22222222 3467999999999999999999999999 556778888888 999999 764 4444432
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
..||+|++ |+.+++++|++|++|++|||+.+|
T Consensus 164 ----------------------------------~~kp~~~~--------------~~~~~~~lg~~~~~~i~vGD~~~D 195 (243)
T 3qxg_A 164 ----------------------------------YGKPNPEP--------------YLMALKKGGLKADEAVVIENAPLG 195 (243)
T ss_dssp ----------------------------------SCTTSSHH--------------HHHHHHHTTCCGGGEEEEECSHHH
T ss_pred ----------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEeCCHHH
Confidence 23999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 020675 307 VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~g 323 (323)
+.+|+++|+.+|+|.++
T Consensus 196 i~~a~~aG~~~i~v~~~ 212 (243)
T 3qxg_A 196 VEAGHKAGIFTIAVNTG 212 (243)
T ss_dssp HHHHHHTTCEEEEECCS
T ss_pred HHHHHHCCCEEEEEeCC
Confidence 99999999999999764
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=196.70 Aligned_cols=182 Identities=15% Similarity=0.144 Sum_probs=134.7
Q ss_pred CCCCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH-HHHHH-------------
Q 020675 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED-RMLVL------------- 143 (323)
Q Consensus 78 ~~~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------- 143 (323)
......+|+|+||+||||+|+... +..++.++++++|++. ...+.+..+.+....... .....
T Consensus 17 ~~~~~~~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (243)
T 2hsz_A 17 FQGMTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDE 93 (243)
T ss_dssp --CCSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred ecCCccCCEEEEcCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHH
Confidence 344566899999999999999885 8889999999999873 445555444332110000 00000
Q ss_pred ---HHh-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhh
Q 020675 144 ---FFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (323)
Q Consensus 144 ---~~~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~ 219 (323)
... ..+.|.+.. ....+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.+ +++++..
T Consensus 94 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~gl~~~f~~~-~~~~~~~- 167 (243)
T 2hsz_A 94 FKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTN---KPTKHVQPILTAFGIDHLFSEM-LGGQSLP- 167 (243)
T ss_dssp HHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEE-ECTTTSS-
T ss_pred HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEEC---CcHHHHHHHHHHcCchheEEEE-EecccCC-
Confidence 000 011222221 23467899999999999999999999999 5678889999999999999875 4444332
Q ss_pred hhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 020675 220 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 299 (323)
Q Consensus 220 ~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~ 299 (323)
..||+|++ |+.+++++|++|++|++
T Consensus 168 -----------------------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~ 192 (243)
T 2hsz_A 168 -----------------------------------------EIKPHPAP--------------FYYLCGKFGLYPKQILF 192 (243)
T ss_dssp -----------------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEE
T ss_pred -----------------------------------------CCCcCHHH--------------HHHHHHHhCcChhhEEE
Confidence 23999999 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEEcCC
Q 020675 300 IAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 300 VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
|||+.+|+.+|+++|+.+|+|.+|
T Consensus 193 vGD~~~Di~~a~~aG~~~i~v~~g 216 (243)
T 2hsz_A 193 VGDSQNDIFAAHSAGCAVVGLTYG 216 (243)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSS
T ss_pred EcCCHHHHHHHHHCCCeEEEEcCC
Confidence 999999999999999999999764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-26 Score=199.91 Aligned_cols=176 Identities=14% Similarity=0.207 Sum_probs=130.6
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh------HHHHHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN------RKNALDEFL 155 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i 155 (323)
|.+|+|+||+||||+|+... +..++.++++++|++. .+.+.+....+ ............ ..+.+.+.+
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (222)
T 2nyv_A 1 MSLRVILFDLDGTLIDSAKD-IALALEKTLKELGLEE--YYPDNVTKYIG---GGVRALLEKVLKDKFREEYVEVFRKHY 74 (222)
T ss_dssp CEECEEEECTBTTTEECHHH-HHHHHHHHHHHTTCGG--GCCSCGGGGCS---SCHHHHHHHHHGGGCCTHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCCCCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhC---cCHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 45789999999999999885 8889999999998862 11111111111 111111111110 011222222
Q ss_pred h---cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 156 A---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 156 ~---~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
. ....+++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.+ ++++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~gl~~~f~~i-~~~~~~~~------------- 137 (222)
T 2nyv_A 75 LENPVVYTKPYPEIPYTLEALKSKGFKLAVVSN---KLEELSKKILDILNLSGYFDLI-VGGDTFGE------------- 137 (222)
T ss_dssp HHCSCSSCEECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEE-ECTTSSCT-------------
T ss_pred HHhccccCccCCCHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCHHHheEE-EecCcCCC-------------
Confidence 1 23567899999999999999999999999 5678889999999999999875 44443322
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
.||+|++ |+.+++++|++|++|++|||+.+|+.+|++
T Consensus 138 -----------------------------~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ 174 (222)
T 2nyv_A 138 -----------------------------KKPSPTP--------------VLKTLEILGEEPEKALIVGDTDADIEAGKR 174 (222)
T ss_dssp -----------------------------TCCTTHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred -----------------------------CCCChHH--------------HHHHHHHhCCCchhEEEECCCHHHHHHHHH
Confidence 3999999 999999999999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+|+.+|+|.+|
T Consensus 175 aG~~~i~v~~g 185 (222)
T 2nyv_A 175 AGTKTALALWG 185 (222)
T ss_dssp HTCEEEEETTS
T ss_pred CCCeEEEEcCC
Confidence 99999998764
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=192.54 Aligned_cols=178 Identities=16% Similarity=0.154 Sum_probs=128.6
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH-HHHHHHHHh----------HHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-DRMLVLFFN----------RKN 149 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------~~~ 149 (323)
.|.+|+|+||+||||+|+... +..++.++++++|+.. .........+...... .......+. ...
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMPN-HAESWHKIMKRFGFGL---SREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQ 95 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCC---CHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred CCCCCEEEECCCCccCcCHHH-HHHHHHHHHHHcCCCC---CHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 356899999999999999885 8889999999999873 3333222222110000 001100000 011
Q ss_pred HHHHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc--cceeechhhhhhhhhcccc
Q 020675 150 ALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 150 ~~~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f--d~~v~s~~~~~~~~~~~~~ 226 (323)
.+.+.+.. ....++||+.++|+.|+++|++++++|| +....+...++. |+..+| +.+ ++++++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~-~l~~~f~~~~~-~~~~~~~~------- 163 (247)
T 3dv9_A 96 AKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTG---SGQTSLLDRLNH-NFPGIFQANLM-VTAFDVKY------- 163 (247)
T ss_dssp HHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECS---CC---CHHHHHH-HSTTTCCGGGE-ECGGGCSS-------
T ss_pred HHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcC---CchHHHHHHHHh-hHHHhcCCCeE-EecccCCC-------
Confidence 22222222 3467899999999999999999999999 455677788888 999999 764 55444322
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
.||+|++ |+.+++++|++|++|++|||+.+|
T Consensus 164 -----------------------------------~kp~~~~--------------~~~~~~~lg~~~~~~i~vGD~~~D 194 (247)
T 3dv9_A 164 -----------------------------------GKPNPEP--------------YLMALKKGGFKPNEALVIENAPLG 194 (247)
T ss_dssp -----------------------------------CTTSSHH--------------HHHHHHHHTCCGGGEEEEECSHHH
T ss_pred -----------------------------------CCCCCHH--------------HHHHHHHcCCChhheEEEeCCHHH
Confidence 3999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 020675 307 VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~g 323 (323)
+.+|+++|+.+|+|.+|
T Consensus 195 i~~a~~aG~~~i~v~~~ 211 (247)
T 3dv9_A 195 VQAGVAAGIFTIAVNTG 211 (247)
T ss_dssp HHHHHHTTSEEEEECCS
T ss_pred HHHHHHCCCeEEEEcCC
Confidence 99999999999999874
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=193.79 Aligned_cols=177 Identities=18% Similarity=0.168 Sum_probs=130.9
Q ss_pred CCceEEEEecCCccccccccch-HHHHHHHHHHcCCCCCCCCHHHHHHHHcccCC------------------------c
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGN-RQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG------------------------D 136 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~-~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------------------------~ 136 (323)
+.+|+|+||+||||+|+... . ..++.++++++|+.. ....+....+.... .
T Consensus 12 ~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (277)
T 3iru_A 12 GPVEALILDWAGTTIDFGSL-APVYAFMELFKQEGIEV---TQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASN 87 (277)
T ss_dssp CCCCEEEEESBTTTBSTTCC-HHHHHHHHHHHTTTCCC---CHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCC
T ss_pred ccCcEEEEcCCCCcccCCcc-cHHHHHHHHHHHhCCCC---CHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCC
Confidence 45899999999999998875 5 689999999999873 33333322221100 0
Q ss_pred HHHHHHHHHhHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc-ccceeechh
Q 020675 137 EDRMLVLFFNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNE 215 (323)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~-fd~~v~s~~ 215 (323)
............+.+.+.+.. ...++||+.++|+.|+++|++++|+|| +....+...++.+|+..+ |+. +++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~tn---~~~~~~~~~l~~~~~~~~~~~~-~~~~~ 162 (277)
T 3iru_A 88 EEDIKRLYDLFAPIQTRIVAQ-RSQLIPGWKEVFDKLIAQGIKVGGNTG---YGPGMMAPALIAAKEQGYTPAS-TVFAT 162 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHHHTTCCCSE-EECGG
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cCccCcCHHHHHHHHHHcCCeEEEEeC---CchHHHHHHHHhcCcccCCCce-EecHH
Confidence 000000000011222222222 367899999999999999999999999 567888999999999888 776 45554
Q ss_pred hhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC-
Q 020675 216 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV- 294 (323)
Q Consensus 216 ~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p- 294 (323)
+... .||+|.+ |+.+++++|++|
T Consensus 163 ~~~~------------------------------------------~kp~~~~--------------~~~~~~~lgi~~~ 186 (277)
T 3iru_A 163 DVVR------------------------------------------GRPFPDM--------------ALKVALELEVGHV 186 (277)
T ss_dssp GSSS------------------------------------------CTTSSHH--------------HHHHHHHHTCSCG
T ss_pred hcCC------------------------------------------CCCCHHH--------------HHHHHHHcCCCCC
Confidence 4322 3999999 999999999999
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 295 RNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 295 ~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++|++|||+.+|+.+|+++||.+|+|.+|
T Consensus 187 ~~~i~vGD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 187 NGCIKVDDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred ccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 99999999999999999999999999875
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-25 Score=192.17 Aligned_cols=173 Identities=16% Similarity=0.243 Sum_probs=123.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHH---------------HHHH-hH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML---------------VLFF-NR 147 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-~~ 147 (323)
+|+|+||+||||+|+... +..++.++++++|++ +..+.+..+.+.......+.. .... ..
T Consensus 2 ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEY-HFLAWKHIAEQIDIP---FDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRK 77 (233)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHH
T ss_pred CcEEEECCCCCcCCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 689999999999999885 888999999999987 344444433332211111100 0000 01
Q ss_pred HHHHHHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccc
Q 020675 148 KNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 148 ~~~~~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~ 226 (323)
.+.+.+.+.. ....++||+.++|+.|+++|++++|+||. .. +...++.+|+..+|+.+ ++++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~--~~~~l~~~gl~~~f~~i-~~~~~~~-------- 143 (233)
T 3nas_A 78 NRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSS---RN--APKILRRLAIIDDFHAI-VDPTTLA-------- 143 (233)
T ss_dssp HHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC---TT--HHHHHHHTTCTTTCSEE-CCC------------
T ss_pred HHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCc---hh--HHHHHHHcCcHhhcCEE-eeHhhCC--------
Confidence 2233333322 22348999999999999999999999994 22 78889999999999975 4444432
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
..||+|++ |+.+++++|++|++|++|||+.+|
T Consensus 144 ----------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i~vGDs~~D 175 (233)
T 3nas_A 144 ----------------------------------KGKPDPDI--------------FLTAAAMLDVSPADCAAIEDAEAG 175 (233)
T ss_dssp ---------------------------------------CCH--------------HHHHHHHHTSCGGGEEEEECSHHH
T ss_pred ----------------------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEEeCCHHH
Confidence 23999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcC
Q 020675 307 VAGAQRIGMPCVVMRS 322 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~ 322 (323)
+.+|+++||.+|++.+
T Consensus 176 i~~a~~aG~~~~~~~~ 191 (233)
T 3nas_A 176 ISAIKSAGMFAVGVGQ 191 (233)
T ss_dssp HHHHHHTTCEEEECC-
T ss_pred HHHHHHcCCEEEEECC
Confidence 9999999999999864
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.6e-25 Score=192.06 Aligned_cols=177 Identities=17% Similarity=0.160 Sum_probs=132.8
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH----------hHHHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF----------NRKNALD 152 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 152 (323)
.+|+|+||+||||+|+... +..++.++++++|++ +....+....+.............. ...+.+.
T Consensus 5 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQ-NVAAWKEALDAENIP---LAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHA 80 (233)
T ss_dssp CCCEEEECCBTTTEECHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHH
T ss_pred cCcEEEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 4789999999999999885 888999999999987 3444444443332111111000000 0011122
Q ss_pred HHHh--cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 153 EFLA--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 153 ~~i~--~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+... .....++||+.++|+.|++.|++++++|| +....++..++.+|+..+|+.+ +++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~------------ 144 (233)
T 3s6j_A 81 QAYERLQHQIIALPGAVELLETLDKENLKWCIATS---GGIDTATINLKALKLDINKINI-VTRDDVS------------ 144 (233)
T ss_dssp HHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECS---SCHHHHHHHHHTTTCCTTSSCE-ECGGGSS------------
T ss_pred HHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeC---CchhhHHHHHHhcchhhhhhee-eccccCC------------
Confidence 2111 12367899999999999999999999999 5678899999999999999975 4444332
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|
T Consensus 145 ------------------------------~~kp~~~~--------------~~~~~~~l~~~~~~~i~iGD~~~Di~~a 180 (233)
T 3s6j_A 145 ------------------------------YGKPDPDL--------------FLAAAKKIGAPIDECLVIGDAIWDMLAA 180 (233)
T ss_dssp ------------------------------CCTTSTHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHH
T ss_pred ------------------------------CCCCChHH--------------HHHHHHHhCCCHHHEEEEeCCHHhHHHH
Confidence 23999999 9999999999999999999999999999
Q ss_pred HHcCCCEEEEcCC
Q 020675 311 QRIGMPCVVMRSR 323 (323)
Q Consensus 311 ~~aG~~~v~v~~g 323 (323)
+++|+.+|+|.+|
T Consensus 181 ~~aG~~~i~v~~g 193 (233)
T 3s6j_A 181 RRCKATGVGLLSG 193 (233)
T ss_dssp HHTTCEEEEEGGG
T ss_pred HHCCCEEEEEeCC
Confidence 9999999999763
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=191.67 Aligned_cols=171 Identities=16% Similarity=0.164 Sum_probs=130.0
Q ss_pred CCCceEEEEecCCccccccccchHHHH-HHHHHHcCCCCCCCC-------HHHHHHHHcccCCcHHHHHHHHHhHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAF-NVAFQKLGLDCANWT-------APIYTDLLRKSAGDEDRMLVLFFNRKNALD 152 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~-~~~~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (323)
.|.+|+|+||+||||+|+... +..++ .++++++|.+...+. .+.+..+.+. ..... ...+.
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~-------~~~~~ 90 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSIN-IDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLGK---RWKEA-------TILYE 90 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSS-CCHHHHHHHHHHTTCCCCCCTTSCTTTHHHHHHHHHGG---GHHHH-------HHHHH
T ss_pred cCCCCEEEECCCCCCcCCchh-HHHHHHHHHHHHcCCCHHHHHHHhCccHHHHHHHHhCc---hHHHH-------HHHHH
Confidence 346899999999999999875 67888 999999988642111 1111111111 00010 12233
Q ss_pred HHHh----cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccc
Q 020675 153 EFLA----SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 153 ~~i~----~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
+.+. .....++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.++ ++++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i~-~~~~~~---------- 156 (231)
T 3kzx_A 91 NSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSN---KNGERLRSEIHHKNLTHYFDSII-GSGDTG---------- 156 (231)
T ss_dssp HHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEEE-EETSSS----------
T ss_pred HHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEEC---CCHHHHHHHHHHCCchhheeeEE-cccccC----------
Confidence 3322 23567899999999999999999999999 66788999999999999999754 433332
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCC-cEEEEcCChhhH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR-NCFLIAGSQSGV 307 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~-~~v~VGDs~~Di 307 (323)
..||+|++ |+.+++++|++|+ +|++|||+.+|+
T Consensus 157 --------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~~v~vGD~~~Di 190 (231)
T 3kzx_A 157 --------------------------------TIKPSPEP--------------VLAALTNINIEPSKEVFFIGDSISDI 190 (231)
T ss_dssp --------------------------------CCTTSSHH--------------HHHHHHHHTCCCSTTEEEEESSHHHH
T ss_pred --------------------------------CCCCChHH--------------HHHHHHHcCCCcccCEEEEcCCHHHH
Confidence 23999999 9999999999999 999999999999
Q ss_pred HHHHHcCCCEEEEcC
Q 020675 308 AGAQRIGMPCVVMRS 322 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~ 322 (323)
++|+++|+.+|++.+
T Consensus 191 ~~a~~aG~~~v~~~~ 205 (231)
T 3kzx_A 191 QSAIEAGCLPIKYGS 205 (231)
T ss_dssp HHHHHTTCEEEEECC
T ss_pred HHHHHCCCeEEEECC
Confidence 999999999999865
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-25 Score=193.72 Aligned_cols=173 Identities=13% Similarity=0.143 Sum_probs=131.7
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH-------HhHHHHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF-------FNRKNALDEF 154 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 154 (323)
|.+|+|+||+||||+|+... +..++.++++++|.. +..+.+....+.. ....+... ......+.+.
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFPMA---AEQAMTELGIAASEFDHFQAQYEDV 74 (209)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTTSC---HHHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred CcccEEEEcCCCCCcCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHHcCCc---HHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 56799999999999999885 888999999999885 4555554444432 11111110 0001112221
Q ss_pred Hhc--CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 155 LAS--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 155 i~~--~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
... ....++||+.++|+.|+++ ++++|+|| +....++..++.+|+..+|+.+ +++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~-------------- 135 (209)
T 2hdo_A 75 MASHYDQIELYPGITSLFEQLPSE-LRLGIVTS---QRRNELESGMRSYPFMMRMAVT-ISADDTP-------------- 135 (209)
T ss_dssp HTTCGGGCEECTTHHHHHHHSCTT-SEEEEECS---SCHHHHHHHHTTSGGGGGEEEE-ECGGGSS--------------
T ss_pred HhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeC---CCHHHHHHHHHHcChHhhccEE-EecCcCC--------------
Confidence 111 3467899999999999999 99999999 5678889999999999999875 4444332
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|++
T Consensus 136 ----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~ 173 (209)
T 2hdo_A 136 ----------------------------KRKPDPLP--------------LLTALEKVNVAPQNALFIGDSVSDEQTAQA 173 (209)
T ss_dssp ----------------------------CCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred ----------------------------CCCCCcHH--------------HHHHHHHcCCCcccEEEECCChhhHHHHHH
Confidence 23999999 999999999999999999999999999999
Q ss_pred cCCCEEEEcC
Q 020675 313 IGMPCVVMRS 322 (323)
Q Consensus 313 aG~~~v~v~~ 322 (323)
+|+.++++.+
T Consensus 174 aG~~~~~~~~ 183 (209)
T 2hdo_A 174 ANVDFGLAVW 183 (209)
T ss_dssp HTCEEEEEGG
T ss_pred cCCeEEEEcC
Confidence 9999999875
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-25 Score=193.64 Aligned_cols=174 Identities=14% Similarity=0.234 Sum_probs=130.1
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH--------hHHHHHHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF--------NRKNALDEFL 155 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i 155 (323)
+|+|+||+||||+|+... +..++.++++++|... ...+.+....+.. ........+ .....+.+.+
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (226)
T 3mc1_A 4 YNYVLFDLDGTLTDSAEG-ITKSVKYSLNKFDIQV--EDLSSLNKFVGPP---LKTSFMEYYNFDEETATVAIDYYRDYF 77 (226)
T ss_dssp CCEEEECSBTTTBCCHHH-HHHHHHHHHHTTTCCC--SCGGGGGGGSSSC---HHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhCcC---HHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 789999999999999875 7899999999999874 2222222221111 111111100 0012222222
Q ss_pred hc---CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 156 AS---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 156 ~~---~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
.. ....++||+.++|+.|+++|++++++|| +....++..++.+|+..+|+.+ +++++...
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~~------------- 140 (226)
T 3mc1_A 78 KAKGMFENKVYDGIEALLSSLKDYGFHLVVATS---KPTVFSKQILEHFKLAFYFDAI-VGSSLDGK------------- 140 (226)
T ss_dssp TTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEE-EEECTTSS-------------
T ss_pred HHhCcccCccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCHhheeee-eccCCCCC-------------
Confidence 21 2367999999999999999999999999 5678899999999999999975 44443322
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
.||+|++ |+.+++++|++|++|++|||+.+|+.+|++
T Consensus 141 -----------------------------~kp~~~~--------------~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~ 177 (226)
T 3mc1_A 141 -----------------------------LSTKEDV--------------IRYAMESLNIKSDDAIMIGDREYDVIGALK 177 (226)
T ss_dssp -----------------------------SCSHHHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHT
T ss_pred -----------------------------CCCCHHH--------------HHHHHHHhCcCcccEEEECCCHHHHHHHHH
Confidence 3899998 999999999999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+|+.+|+|.+|
T Consensus 178 aG~~~i~v~~g 188 (226)
T 3mc1_A 178 NNLPSIGVTYG 188 (226)
T ss_dssp TTCCEEEESSS
T ss_pred CCCCEEEEccC
Confidence 99999999854
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.9e-25 Score=195.88 Aligned_cols=177 Identities=21% Similarity=0.310 Sum_probs=129.8
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh-----------HHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-----------RKN 149 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 149 (323)
.+.+|+|+||+||||+|+... +..++.++++++|+. ...+.+..+.+.......+.....+. ..+
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERL-YSVVFQEICNRYDKK---YSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQT 102 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHH-HHHHHHHHHHHhCCC---CCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 356899999999999999885 889999999999987 34555444443221111111100000 012
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCCccccceeechh--hhhhhhhcccc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE--EVERSLYGQFV 226 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~~~fd~~v~s~~--~~~~~~~~~~~ 226 (323)
.+.+.+ ....++||+.++|+.|+++|++++|+|| +....+...+.. +|+..+|+.+ ++++ ++.
T Consensus 103 ~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn---~~~~~~~~~l~~~~~l~~~f~~~-~~~~~~~~~-------- 168 (250)
T 3l5k_A 103 KLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATS---SRSASFDMKTSRHKEFFSLFSHI-VLGDDPEVQ-------- 168 (250)
T ss_dssp HHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECS---CCHHHHHHHTTTCHHHHTTSSCE-ECTTCTTCC--------
T ss_pred HHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeC---CCHHHHHHHHHhccCHHhheeeE-Eecchhhcc--------
Confidence 222222 2467999999999999999999999999 455666665544 5888889875 4443 332
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC--CcEEEEcCCh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGSQ 304 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p--~~~v~VGDs~ 304 (323)
..||+|++ |+.+++++|++| ++|++|||+.
T Consensus 169 ----------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~~~i~iGD~~ 200 (250)
T 3l5k_A 169 ----------------------------------HGKPDPDI--------------FLACAKRFSPPPAMEKCLVFEDAP 200 (250)
T ss_dssp ----------------------------------SCTTSTHH--------------HHHHHHTSSSCCCGGGEEEEESSH
T ss_pred ----------------------------------CCCCChHH--------------HHHHHHHcCCCCCcceEEEEeCCH
Confidence 23999999 999999999998 9999999999
Q ss_pred hhHHHHHHcCCCEEEEcCC
Q 020675 305 SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 305 ~Di~aA~~aG~~~v~v~~g 323 (323)
+|+++|+++||.+|+|.++
T Consensus 201 ~Di~~a~~aG~~~i~v~~~ 219 (250)
T 3l5k_A 201 NGVEAALAAGMQVVMVPDG 219 (250)
T ss_dssp HHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHcCCEEEEEcCC
Confidence 9999999999999999764
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=186.53 Aligned_cols=176 Identities=15% Similarity=0.160 Sum_probs=127.5
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHH----cccCCcHHHHHHHHHh------HHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL----RKSAGDEDRMLVLFFN------RKNAL 151 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~------~~~~~ 151 (323)
|++|+|+||+||||+|+.. ...++.++++++|++. .......... ..........+..... ..+.+
T Consensus 2 M~~k~viFDlDGTL~d~~~--~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGW--DREQRADVAQRFGLDT--DDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPEDF 77 (200)
T ss_dssp CCCCEEEECCBTTTBCCSS--CHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHHH
T ss_pred CCceEEEEeCCCeeECCCc--chHHHHHHHHHcCCCH--HHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHHH
Confidence 5689999999999999875 3578888999998862 1111111110 1110111121111110 02233
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
.+.+... ..++||+.++|+.|+++| +++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 78 ~~~~~~~-~~~~~~~~~~l~~l~~~g-~~~i~s~---~~~~~~~~~l~~~~~~~~f~~~-~~~~~~~------------- 138 (200)
T 3cnh_A 78 RAVMEEQ-SQPRPEVLALARDLGQRY-RMYSLNN---EGRDLNEYRIRTFGLGEFLLAF-FTSSALG------------- 138 (200)
T ss_dssp HHHHHHT-CCBCHHHHHHHHHHTTTS-EEEEEEC---CCHHHHHHHHHHHTGGGTCSCE-EEHHHHS-------------
T ss_pred HHHHHhc-CccCccHHHHHHHHHHcC-CEEEEeC---CcHHHHHHHHHhCCHHHhcceE-EeecccC-------------
Confidence 3333233 459999999999999999 9999999 5678889999999999999875 4443332
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+
T Consensus 139 -----------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~Di~~a~ 175 (200)
T 3cnh_A 139 -----------------------------VMKPNPAM--------------YRLGLTLAQVRPEEAVMVDDRLQNVQAAR 175 (200)
T ss_dssp -----------------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHH
T ss_pred -----------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEeCCCHHHHHHHH
Confidence 24999999 99999999999999999999999999999
Q ss_pred HcCCCEEEEcCC
Q 020675 312 RIGMPCVVMRSR 323 (323)
Q Consensus 312 ~aG~~~v~v~~g 323 (323)
++|+.+++|.++
T Consensus 176 ~aG~~~~~~~~~ 187 (200)
T 3cnh_A 176 AVGMHAVQCVDA 187 (200)
T ss_dssp HTTCEEEECSCH
T ss_pred HCCCEEEEECCc
Confidence 999999998763
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=195.42 Aligned_cols=175 Identities=14% Similarity=0.184 Sum_probs=128.5
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcc--------------cCC-cHHHHH----HHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK--------------SAG-DEDRML----VLF 144 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~----~~~ 144 (323)
+|+|+||+||||+|+... +..++.+++.++|+. +..+.+...+.. ..+ .....+ ...
T Consensus 1 ik~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHP-LGEAYATKARAHGLE---VEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQT 76 (263)
T ss_dssp CCEEEECCBTTTEEESSC-HHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHH
Confidence 479999999999998875 788999999999997 344433222211 001 111111 111
Q ss_pred HhH-------------HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccccee
Q 020675 145 FNR-------------KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 211 (323)
Q Consensus 145 ~~~-------------~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v 211 (323)
+.. ...+..+.....+.++||+.++|+.|+++|++++|+||. .. .+..+++.+|+..+|+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~---~~-~~~~~l~~~gl~~~f~~~- 151 (263)
T 3k1z_A 77 FHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNF---DR-RLEGILGGLGLREHFDFV- 151 (263)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESC---CT-THHHHHHHTTCGGGCSCE-
T ss_pred HHHcCCCCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCC---cH-HHHHHHHhCCcHHhhhEE-
Confidence 110 112222222223568999999999999999999999994 33 368899999999999975
Q ss_pred echhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC
Q 020675 212 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 291 (323)
Q Consensus 212 ~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg 291 (323)
+++++.. ..||+|++ |+.+++++|
T Consensus 152 ~~~~~~~------------------------------------------~~Kp~~~~--------------~~~~~~~~g 175 (263)
T 3k1z_A 152 LTSEAAG------------------------------------------WPKPDPRI--------------FQEALRLAH 175 (263)
T ss_dssp EEHHHHS------------------------------------------SCTTSHHH--------------HHHHHHHHT
T ss_pred EeecccC------------------------------------------CCCCCHHH--------------HHHHHHHcC
Confidence 4444432 24999999 999999999
Q ss_pred CCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 292 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 292 v~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
++|++|++|||+. +|+.+|+++||.+|++.++
T Consensus 176 ~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~ 208 (263)
T 3k1z_A 176 MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGP 208 (263)
T ss_dssp CCGGGEEEEESCHHHHTHHHHTTTCEEEEECCS
T ss_pred CCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCC
Confidence 9999999999997 9999999999999999864
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-24 Score=186.06 Aligned_cols=176 Identities=15% Similarity=0.173 Sum_probs=131.7
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcc----------cCCcHHHHH----HHHH--
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK----------SAGDEDRML----VLFF-- 145 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~-- 145 (323)
|.+|+|+||+||||+|+... +..++.++++++|++. .......+.+. ......... ....
T Consensus 5 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILDFQAA-EALALRLLFEDQNIPL---TNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKE 80 (238)
T ss_dssp CCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCC---CHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCcCcCcCCchh-HHHHHHHHHHHcCCCc---chHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 56899999999999999885 8899999999999874 33222221111 101111111 1111
Q ss_pred --------hHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhh
Q 020675 146 --------NRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 217 (323)
Q Consensus 146 --------~~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~ 217 (323)
...+.+.+... ....++||+.++|+.|+++ ++++++|| +....+...++.+|+..+|+.+ +++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~ 154 (238)
T 3ed5_A 81 YGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQ-FDLYIVTN---GVSHTQYKRLRDSGLFPFFKDI-FVSEDT 154 (238)
T ss_dssp TTCCCCHHHHHHHHHHHHT-TCCCBCTTHHHHHHHHHTT-SEEEEEEC---SCHHHHHHHHHHTTCGGGCSEE-EEGGGT
T ss_pred cCCCCcHHHHHHHHHHHHH-hcCCCCccHHHHHHHHHhc-CeEEEEeC---CCHHHHHHHHHHcChHhhhheE-EEeccc
Confidence 01233334333 3467999999999999999 99999999 5678889999999999999975 444433
Q ss_pred hhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC-CCCCc
Q 020675 218 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE-KPVRN 296 (323)
Q Consensus 218 ~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg-v~p~~ 296 (323)
. ..||+|++ |+.+++++| ++|++
T Consensus 155 ~------------------------------------------~~kp~~~~--------------~~~~~~~~g~~~~~~ 178 (238)
T 3ed5_A 155 G------------------------------------------FQKPMKEY--------------FNYVFERIPQFSAEH 178 (238)
T ss_dssp T------------------------------------------SCTTCHHH--------------HHHHHHTSTTCCGGG
T ss_pred C------------------------------------------CCCCChHH--------------HHHHHHHcCCCChhH
Confidence 2 23999999 999999999 99999
Q ss_pred EEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 297 CFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 297 ~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
|++|||+. +|+.+|+++|+.+|++.++
T Consensus 179 ~i~vGD~~~~Di~~a~~aG~~~i~~~~~ 206 (238)
T 3ed5_A 179 TLIIGDSLTADIKGGQLAGLDTCWMNPD 206 (238)
T ss_dssp EEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred eEEECCCcHHHHHHHHHCCCEEEEECCC
Confidence 99999998 9999999999999999764
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-24 Score=185.59 Aligned_cols=168 Identities=18% Similarity=0.171 Sum_probs=125.4
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCC
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAP 161 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 161 (323)
|.+|+|+||+||||+|+... +.++++++|++. ..+....+.+.. ..... ........+.+.+. ....
T Consensus 4 ~~~k~iifDlDGTL~d~~~~-----~~~~~~~~g~~~---~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~-~~~~ 70 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHD-----FAAIREALSIPA---EDDILTHLAALP-ADESA---AKHAWLLEHERDLA-QGSR 70 (205)
T ss_dssp GGCCEEEECTBTTTEEEEEC-----HHHHHHHTTCCT---TSCHHHHHHHSC-HHHHH---HHHHHHHHTHHHHE-EEEE
T ss_pred ccCCEEEEeCCCcCcccHHH-----HHHHHHHhCCCc---hHHHHHHHhcCC-hHHHH---HHHHHHHHHHHHHh-hcCC
Confidence 56899999999999998763 346778889874 233333332221 11111 11111222333222 2356
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc--cceeechhhhhhhhhcccccccccccCcchhH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS--KIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f--d~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
++||+.++|+.|+++|++++|+|| +....++..++.+|+..+| +. +++.+. .
T Consensus 71 ~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~~-i~~~~~-~--------------------- 124 (205)
T 3m9l_A 71 PAPGAVELVRELAGRGYRLGILTR---NARELAHVTLEAIGLADCFAEAD-VLGRDE-A--------------------- 124 (205)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGSCGGG-EECTTT-S---------------------
T ss_pred CCccHHHHHHHHHhcCCeEEEEeC---CchHHHHHHHHHcCchhhcCcce-EEeCCC-C---------------------
Confidence 899999999999999999999999 5678899999999999999 55 344433 1
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.+|+
T Consensus 125 ---------------------~~kp~~~~--------------~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~ 169 (205)
T 3m9l_A 125 ---------------------PPKPHPGG--------------LLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVL 169 (205)
T ss_dssp ---------------------CCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEE
Confidence 13999999 9999999999999999999999999999999999999
Q ss_pred EcCC
Q 020675 320 MRSR 323 (323)
Q Consensus 320 v~~g 323 (323)
+.++
T Consensus 170 v~~~ 173 (205)
T 3m9l_A 170 VNLP 173 (205)
T ss_dssp CSSS
T ss_pred EeCC
Confidence 9764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.5e-24 Score=186.63 Aligned_cols=179 Identities=16% Similarity=0.234 Sum_probs=130.2
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHH-cc----------cCCcHHHH----HHHHHh
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL-RK----------SAGDEDRM----LVLFFN 146 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~-~~----------~~~~~~~~----~~~~~~ 146 (323)
|.+|+|+||+||||+|+... +..++.++++++|+.....+.+.+...+ +. ........ +.....
T Consensus 3 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRN-ARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQ 81 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHH-HHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhh-HHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 56899999999999999885 7889999999999863101232222211 10 00001111 000000
Q ss_pred ------------HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeech
Q 020675 147 ------------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (323)
Q Consensus 147 ------------~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~ 214 (323)
..+.+.+... ....++||+.++|+.|+ +|++++++|| +....+...++.+|+..+|+.+ +++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~-~g~~~~i~sn---~~~~~~~~~l~~~~l~~~f~~~-~~~ 155 (240)
T 3qnm_A 82 AVGVEDEALAERFSEDFFAIIP-TKSGLMPHAKEVLEYLA-PQYNLYILSN---GFRELQSRKMRSAGVDRYFKKI-ILS 155 (240)
T ss_dssp HTTCCCHHHHHHHHHHHHHHGG-GCCCBSTTHHHHHHHHT-TTSEEEEEEC---SCHHHHHHHHHHHTCGGGCSEE-EEG
T ss_pred HcCCCcHHHHHHHHHHHHHHhh-hcCCcCccHHHHHHHHH-cCCeEEEEeC---CchHHHHHHHHHcChHhhceeE-EEe
Confidence 0122233222 34679999999999999 9999999999 5678889999999999999975 444
Q ss_pred hhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC
Q 020675 215 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 294 (323)
Q Consensus 215 ~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p 294 (323)
++.. ..||+|.+ |+.+++++|++|
T Consensus 156 ~~~~------------------------------------------~~kp~~~~--------------~~~~~~~lgi~~ 179 (240)
T 3qnm_A 156 EDLG------------------------------------------VLKPRPEI--------------FHFALSATQSEL 179 (240)
T ss_dssp GGTT------------------------------------------CCTTSHHH--------------HHHHHHHTTCCG
T ss_pred ccCC------------------------------------------CCCCCHHH--------------HHHHHHHcCCCc
Confidence 3332 23999999 999999999999
Q ss_pred CcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 295 RNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 295 ~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
++|++|||+. +|+.+|+++|+.++++.++
T Consensus 180 ~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~ 209 (240)
T 3qnm_A 180 RESLMIGDSWEADITGAHGVGMHQAFYNVT 209 (240)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECCS
T ss_pred ccEEEECCCchHhHHHHHHcCCeEEEEcCC
Confidence 9999999995 9999999999999999864
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=182.93 Aligned_cols=177 Identities=16% Similarity=0.170 Sum_probs=129.1
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHc-ccCCcHHHHHHHH----HhHHHHHHHHHh
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR-KSAGDEDRMLVLF----FNRKNALDEFLA 156 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~i~ 156 (323)
|.+|+|+||+||||+|+... +..++.++++++|+. .....+....+ .......+..... ......+.+...
T Consensus 2 M~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIP---YDKEKVREFIFKYSVQDLLVRVAEDRNLDVEVLNQVRAQSL 77 (207)
T ss_dssp --CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCC---CCHHHHHHHHHHSCHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CcccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCC---CCHHHHHHHHccccHHHHHHHhhchhhccHHHHHHHHHHHH
Confidence 45799999999999999875 778899999999885 34555555544 2211111111100 000111222111
Q ss_pred ---cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccccc
Q 020675 157 ---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 157 ---~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
.....++|++.++|+.|+++|++++++|| +...... .++.+++..+|+.+ +++++..
T Consensus 78 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~-~~~~~~~~~~f~~~-~~~~~~~--------------- 137 (207)
T 2go7_A 78 AEKNAQVVLMPGAREVLAWADESGIQQFIYTH---KGNNAFT-ILKDLGVESYFTEI-LTSQSGF--------------- 137 (207)
T ss_dssp TTCGGGCEECTTHHHHHHHHHHTTCEEEEECS---SCTHHHH-HHHHHTCGGGEEEE-ECGGGCC---------------
T ss_pred HhccccceeCcCHHHHHHHHHHCCCeEEEEeC---CchHHHH-HHHHcCchhheeeE-EecCcCC---------------
Confidence 12356899999999999999999999999 4567777 88999999999875 4443322
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
..||+|++ |+.+++++|++|+++++|||+.+|+.+|+++
T Consensus 138 ---------------------------~~Kp~~~~--------------~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~a 176 (207)
T 2go7_A 138 ---------------------------VRKPSPEA--------------ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNS 176 (207)
T ss_dssp ---------------------------CCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHHH
T ss_pred ---------------------------CCCCCcHH--------------HHHHHHHhCCCcccEEEECCCHHHHHHHHHC
Confidence 23999999 9999999999999999999999999999999
Q ss_pred CCCEEEEcCC
Q 020675 314 GMPCVVMRSR 323 (323)
Q Consensus 314 G~~~v~v~~g 323 (323)
|+.+|++.++
T Consensus 177 G~~~i~~~~~ 186 (207)
T 2go7_A 177 GIQSINFLES 186 (207)
T ss_dssp TCEEEESSCC
T ss_pred CCeEEEEecC
Confidence 9999998764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-24 Score=187.28 Aligned_cols=182 Identities=14% Similarity=0.178 Sum_probs=127.4
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHH-cCCCCC----CCC----HHHHHHHHcccCCcHH---HHHHHHHh-HH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCA----NWT----APIYTDLLRKSAGDED---RMLVLFFN-RK 148 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~-~g~~~~----~~~----~~~~~~~~~~~~~~~~---~~~~~~~~-~~ 148 (323)
|.+|+|+||+||||+|+... +..++.+++.+ +|.+.. ... ...+..++........ ........ ..
T Consensus 2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYI 80 (234)
T ss_dssp -CCEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHH
Confidence 45899999999999999986 88899999888 687642 000 1112222222111111 00111111 11
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHC-CCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 149 NALDEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 149 ~~~~~~i~~~~~~l~pgv~elL~~Lk~~-Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
..+.+.+......++||+.++|+.|+++ |++++|+|| +....+...++.+|+..+|+..+ ++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~-~~~~~~~-------- 148 (234)
T 2hcf_A 81 ALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTG---NFEASGRHKLKLPGIDHYFPFGA-FADDALD-------- 148 (234)
T ss_dssp HHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECS---SCHHHHHHHHHTTTCSTTCSCEE-CTTTCSS--------
T ss_pred HHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcC---CcHHHHHHHHHHCCchhhcCcce-ecCCCcC--------
Confidence 2222222113356899999999999999 999999999 56788889999999999998643 3333211
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChh
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQS 305 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg--v~p~~~v~VGDs~~ 305 (323)
..||.|.+ |+.+++++| ++|++|++|||+.+
T Consensus 149 ---------------------------------~~k~~~~~--------------~~~~~~~lg~~~~~~~~i~iGD~~~ 181 (234)
T 2hcf_A 149 ---------------------------------RNELPHIA--------------LERARRMTGANYSPSQIVIIGDTEH 181 (234)
T ss_dssp ---------------------------------GGGHHHHH--------------HHHHHHHHCCCCCGGGEEEEESSHH
T ss_pred ---------------------------------ccchHHHH--------------HHHHHHHhCCCCCcccEEEECCCHH
Confidence 12677777 899999999 99999999999999
Q ss_pred hHHHHHHcCCCEEEEcCC
Q 020675 306 GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 306 Di~aA~~aG~~~v~v~~g 323 (323)
|+.+|+++|+.+|+|.++
T Consensus 182 Di~~a~~aG~~~i~v~~~ 199 (234)
T 2hcf_A 182 DIRCARELDARSIAVATG 199 (234)
T ss_dssp HHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHCCCcEEEEcCC
Confidence 999999999999999764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-24 Score=193.16 Aligned_cols=179 Identities=13% Similarity=0.137 Sum_probs=125.7
Q ss_pred CCCCCceEEEEecCCccccccccchHHHHHHHHHH----cCCCCCCCCHHH----HHHHHcccC----CcHHHH----HH
Q 020675 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK----LGLDCANWTAPI----YTDLLRKSA----GDEDRM----LV 142 (323)
Q Consensus 79 ~~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~----~g~~~~~~~~~~----~~~~~~~~~----~~~~~~----~~ 142 (323)
...+++|+||||+||||+|+... +..++++++++ +|++. ..... +..+.+... ...... +.
T Consensus 13 ~~~~~~k~viFDlDGTLvds~~~-~~~a~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (260)
T 2gfh_A 13 MGLSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKE--EAEIICDKVQVKLSKECFHPYSTCITDVRTSHWE 89 (260)
T ss_dssp EECCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTTCCCT--HHHHHHHHHHHHHHTCCCC----CHHHHHHHHHH
T ss_pred cccccceEEEEcCCCCCCCCHHH-HHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHhhccccccccHHHHHHHHHH
Confidence 44567899999999999999985 78888888774 45541 00111 111221100 001100 00
Q ss_pred HHH--------------hHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 143 LFF--------------NRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 143 ~~~--------------~~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
..+ ...+.+.+.. ....+++||+.++|+.|++ +++++|+|| +....+...++.+|+..+|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn---~~~~~~~~~l~~~gl~~~f~ 164 (260)
T 2gfh_A 90 EAIQETKGGADNRKLAEECYFLWKSTR-LQHMILADDVKAMLTELRK-EVRLLLLTN---GDRQTQREKIEACACQSYFD 164 (260)
T ss_dssp HHHHHHHCSSCCHHHHHHHHHHHHHHH-HHTCCCCHHHHHHHHHHHT-TSEEEEEEC---SCHHHHHHHHHHHTCGGGCS
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHH-HhcCCCCcCHHHHHHHHHc-CCcEEEEEC---cChHHHHHHHHhcCHHhhhh
Confidence 000 0011122111 1246799999999999997 599999999 56788899999999999999
Q ss_pred ceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHH
Q 020675 209 IKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAE 288 (323)
Q Consensus 209 ~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~ 288 (323)
.++ ++++... .||+|++ |+.+++
T Consensus 165 ~i~-~~~~~~~------------------------------------------~KP~p~~--------------~~~~~~ 187 (260)
T 2gfh_A 165 AIV-IGGEQKE------------------------------------------EKPAPSI--------------FYHCCD 187 (260)
T ss_dssp EEE-EGGGSSS------------------------------------------CTTCHHH--------------HHHHHH
T ss_pred eEE-ecCCCCC------------------------------------------CCCCHHH--------------HHHHHH
Confidence 754 4443322 3999999 999999
Q ss_pred HcCCCCCcEEEEcCC-hhhHHHHHHcCC-CEEEEcC
Q 020675 289 YAEKPVRNCFLIAGS-QSGVAGAQRIGM-PCVVMRS 322 (323)
Q Consensus 289 ~lgv~p~~~v~VGDs-~~Di~aA~~aG~-~~v~v~~ 322 (323)
++|++|++|+||||+ .+|+.+|+++|| .+|+|.+
T Consensus 188 ~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~ 223 (260)
T 2gfh_A 188 LLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINK 223 (260)
T ss_dssp HHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred HcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcC
Confidence 999999999999995 899999999999 7999865
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.7e-24 Score=187.91 Aligned_cols=178 Identities=15% Similarity=0.119 Sum_probs=126.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCH-HHHHHHH-ccc-----CCc-HHHHHHHH---------Hh
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLL-RKS-----AGD-EDRMLVLF---------FN 146 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~~~-~~~-----~~~-~~~~~~~~---------~~ 146 (323)
+|+|+||+||||+|+... +..++.+++++++........ +.+..+. +.. ... ...+.... ..
T Consensus 2 ~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWISA 80 (241)
T ss_dssp CCEEEECSBTTTBCHHHH-HHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHHHH
T ss_pred ccEEEEcCCCCCCCChhh-HHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHHHH
Confidence 689999999999999885 778888888886421101222 2222221 000 000 00011000 00
Q ss_pred HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccc
Q 020675 147 RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 147 ~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~ 226 (323)
..+.+.+.+.. ...++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~-------- 147 (241)
T 2hoq_A 81 GVIAYHNTKFA-YLREVPGARKVLIRLKELGYELGIITD---GNPVKQWEKILRLELDDFFEHV-IISDFEG-------- 147 (241)
T ss_dssp HHHHHHHHHHH-HCCBCTTHHHHHHHHHHHTCEEEEEEC---SCHHHHHHHHHHTTCGGGCSEE-EEGGGGT--------
T ss_pred HHHHHHHHHHh-hCCCCccHHHHHHHHHHCCCEEEEEEC---CCchhHHHHHHHcCcHhhccEE-EEeCCCC--------
Confidence 11223332222 256899999999999999999999999 5678888999999999999975 4444332
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-h
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-S 305 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~ 305 (323)
..||+|++ |+.+++++|++|++|++|||+. +
T Consensus 148 ----------------------------------~~Kp~~~~--------------~~~~~~~~g~~~~~~i~iGD~~~~ 179 (241)
T 2hoq_A 148 ----------------------------------VKKPHPKI--------------FKKALKAFNVKPEEALMVGDRLYS 179 (241)
T ss_dssp ----------------------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCTTT
T ss_pred ----------------------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEECCCchH
Confidence 23999999 9999999999999999999998 9
Q ss_pred hHHHHHHcCCCEEEEcCC
Q 020675 306 GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 306 Di~aA~~aG~~~v~v~~g 323 (323)
|+.+|+++||.+|+|.+|
T Consensus 180 Di~~a~~aG~~~~~v~~g 197 (241)
T 2hoq_A 180 DIYGAKRVGMKTVWFRYG 197 (241)
T ss_dssp THHHHHHTTCEEEEECCS
T ss_pred hHHHHHHCCCEEEEECCC
Confidence 999999999999999764
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-24 Score=189.71 Aligned_cols=176 Identities=13% Similarity=0.192 Sum_probs=129.8
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHccc--------CCcHHHHHHHHHhH-HHHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS--------AGDEDRMLVLFFNR-KNALDE 153 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~ 153 (323)
.+|+|+||+||||+|+... +..++.++++++|.+. ..+.+....+.. .+-........... .+.+.+
T Consensus 28 mik~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEG-ITKSIQYSLNSFGIKE---DLENLDQFIGPPLHDTFKEYYKFEDKKAKEAVEKYREYFAD 103 (240)
T ss_dssp CCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC---CGGGGGGGSSSCHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred hccEEEEecCCcCccCHHH-HHHHHHHHHHHcCCCC---CHHHHHHHhCccHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3699999999999999875 8889999999999872 222221111110 01011111111111 122222
Q ss_pred HHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccccc
Q 020675 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 154 ~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
. ......++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.+ +++++..
T Consensus 104 ~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~--------------- 163 (240)
T 3sd7_A 104 K-GIFENKIYENMKEILEMLYKNGKILLVATS---KPTVFAETILRYFDIDRYFKYI-AGSNLDG--------------- 163 (240)
T ss_dssp T-GGGCCEECTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCGGGCSEE-EEECTTS---------------
T ss_pred h-cccccccCccHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHHcCcHhhEEEE-EeccccC---------------
Confidence 1 122467999999999999999999999999 6778899999999999999975 4443332
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCChhhHHHHHH
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~v~VGDs~~Di~aA~~ 312 (323)
..||+|++ |+.+++++|++ |++|++|||+.+|+.+|++
T Consensus 164 ---------------------------~~kp~~~~--------------~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~ 202 (240)
T 3sd7_A 164 ---------------------------TRVNKNEV--------------IQYVLDLCNVKDKDKVIMVGDRKYDIIGAKK 202 (240)
T ss_dssp ---------------------------CCCCHHHH--------------HHHHHHHHTCCCGGGEEEEESSHHHHHHHHH
T ss_pred ---------------------------CCCCCHHH--------------HHHHHHHcCCCCCCcEEEECCCHHHHHHHHH
Confidence 23899998 99999999999 9999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+|+.+|+|.+|
T Consensus 203 aG~~~i~v~~g 213 (240)
T 3sd7_A 203 IGIDSIGVLYG 213 (240)
T ss_dssp HTCEEEEESSS
T ss_pred CCCCEEEEeCC
Confidence 99999999854
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=185.33 Aligned_cols=173 Identities=17% Similarity=0.139 Sum_probs=122.8
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHc--------ccCCcHHHHHHHHHhH------H
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR--------KSAGDEDRMLVLFFNR------K 148 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~------~ 148 (323)
.+|+|+||+||||+|+.. ..+.+.+.++|++. ..+.+..+.+ ...-............ .
T Consensus 27 ~ik~viFD~DGTL~d~~~----~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (229)
T 4dcc_A 27 GIKNLLIDLGGVLINLDR----ERCIENFKKIGFQN---IEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSD 99 (229)
T ss_dssp CCCEEEECSBTTTBCBCH----HHHHHHHHHHTCTT---HHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCH
T ss_pred CCCEEEEeCCCeEEeCCh----HHHHHHHHHhCCCc---HHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCH
Confidence 479999999999999764 56667788888862 2333322111 1101112222111111 2
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHH------HHcCCCccccceeechhhhhhhhh
Q 020675 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV------EKLGSERISKIKIVGNEEVERSLY 222 (323)
Q Consensus 149 ~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l------~~lgl~~~fd~~v~s~~~~~~~~~ 222 (323)
+.+.+.+......++||+.++|+.|+++ ++++|+|| +.......++ +.+|+..+|+.+ +++++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn---~~~~~~~~~~~~l~~~~~~~l~~~fd~i-~~~~~~~---- 170 (229)
T 4dcc_A 100 KQIDAAWNSFLVDIPTYKLDLLLKLREK-YVVYLLSN---TNDIHWKWVCKNAFPYRTFKVEDYFEKT-YLSYEMK---- 170 (229)
T ss_dssp HHHHHHHHTTBCCCCHHHHHHHHHHTTT-SEEEEEEC---CCHHHHHHHHHHTSCBTTBCHHHHCSEE-EEHHHHT----
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHhc-CcEEEEEC---CChHHHHHHHhhhhhhccCCHHHhCCEE-EeecccC----
Confidence 2233333333335789999999999998 99999999 5567777555 677888899875 4444432
Q ss_pred cccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 020675 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (323)
Q Consensus 223 ~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGD 302 (323)
..||+|++ |+.+++++|++|++|++|||
T Consensus 171 --------------------------------------~~KP~~~~--------------~~~~~~~~g~~~~~~~~vGD 198 (229)
T 4dcc_A 171 --------------------------------------MAKPEPEI--------------FKAVTEDAGIDPKETFFIDD 198 (229)
T ss_dssp --------------------------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEECS
T ss_pred --------------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEECC
Confidence 34999999 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEEcCC
Q 020675 303 SQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 303 s~~Di~aA~~aG~~~v~v~~g 323 (323)
+.+|+.+|+++||.+|++.++
T Consensus 199 ~~~Di~~a~~aG~~~i~v~~~ 219 (229)
T 4dcc_A 199 SEINCKVAQELGISTYTPKAG 219 (229)
T ss_dssp CHHHHHHHHHTTCEEECCCTT
T ss_pred CHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999998764
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-23 Score=176.49 Aligned_cols=171 Identities=16% Similarity=0.133 Sum_probs=125.7
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH------H-hHHHHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF------F-NRKNALDEF 154 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~ 154 (323)
|.+|+|+||+||||+|+... +..++.++++++|+.. ..+.+...+... ......... . ...+.+.+.
T Consensus 4 M~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGITQ---DHDSVYQALKVS--TPFAIETFAPNLENFLEKYKENEARE 77 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCCC---CHHHHHHHHHHC--HHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred CcccEEEEeCCCCcCCCHHH-HHHHHHHHHHHhCCCC---CHHHHHHHHccc--cHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 56799999999999998875 7889999999999863 333333322111 111111100 0 011222332
Q ss_pred HhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccC
Q 020675 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 155 i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
. .. ..++||+.++|+.|+++|++++++||. . ..+...++.+|+..+|+.+ +++++..
T Consensus 78 ~-~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~---~-~~~~~~l~~~~~~~~f~~~-~~~~~~~---------------- 134 (190)
T 2fi1_A 78 L-EH-PILFEGVSDLLEDISNQGGRHFLVSHR---N-DQVLEILEKTSIAAYFTEV-VTSSSGF---------------- 134 (190)
T ss_dssp T-TS-CCBCTTHHHHHHHHHHTTCEEEEECSS---C-THHHHHHHHTTCGGGEEEE-ECGGGCC----------------
T ss_pred c-Cc-CccCcCHHHHHHHHHHCCCcEEEEECC---c-HHHHHHHHHcCCHhheeee-eeccccC----------------
Confidence 2 22 238999999999999999999999993 3 4678889999999999874 4444332
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
..||+|++ |+.+++++|++ +|++|||+.+|+++|+++|
T Consensus 135 --------------------------~~kp~~~~--------------~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG 172 (190)
T 2fi1_A 135 --------------------------KRKPNPES--------------MLYLREKYQIS--SGLVIGDRPIDIEAGQAAG 172 (190)
T ss_dssp --------------------------CCTTSCHH--------------HHHHHHHTTCS--SEEEEESSHHHHHHHHHTT
T ss_pred --------------------------CCCCCHHH--------------HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcC
Confidence 23999999 99999999998 9999999999999999999
Q ss_pred CCEEEEcCC
Q 020675 315 MPCVVMRSR 323 (323)
Q Consensus 315 ~~~v~v~~g 323 (323)
+.++++.++
T Consensus 173 ~~~~~~~~~ 181 (190)
T 2fi1_A 173 LDTHLFTSI 181 (190)
T ss_dssp CEEEECSCH
T ss_pred CeEEEECCC
Confidence 999998763
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-24 Score=194.80 Aligned_cols=102 Identities=10% Similarity=0.101 Sum_probs=89.5
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc---CCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l---gl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
...++||+.++|+.|+++|++++|+|| +....++.+++.+ |+..+|+.+ +++ ++.
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn---~~~~~~~~~l~~~~~~~l~~~fd~i-~~~-~~~----------------- 185 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSS---GSVEAQKLLFGHSTEGDILELVDGH-FDT-KIG----------------- 185 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHTBTTBCCGGGCSEE-ECG-GGC-----------------
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeC---CCHHHHHHHHHhhcccChHhhccEE-Eec-CCC-----------------
Confidence 467999999999999999999999999 5667788888854 599999975 444 332
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
.||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||
T Consensus 186 --------------------------~KP~p~~--------------~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~ 225 (261)
T 1yns_A 186 --------------------------HKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADV 225 (261)
T ss_dssp --------------------------CTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred --------------------------CCCCHHH--------------HHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCC
Confidence 2999999 999999999999999999999999999999999
Q ss_pred CEEEEcC
Q 020675 316 PCVVMRS 322 (323)
Q Consensus 316 ~~v~v~~ 322 (323)
.+|+|.+
T Consensus 226 ~~i~v~~ 232 (261)
T 1yns_A 226 HVAVVVR 232 (261)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999965
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=182.08 Aligned_cols=176 Identities=15% Similarity=0.147 Sum_probs=129.6
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH------------HhH-
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF------------FNR- 147 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~- 147 (323)
.|.+|+|+||+||||+|+... +..++.++++++|... ...+.+....+.. ........ ...
T Consensus 3 ~M~~k~v~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~ 76 (225)
T 3d6j_A 3 AMKYTVYLFDFDYTLADSSRG-IVTCFRSVLERHGYTG--ITDDMIKRTIGKT---LEESFSILTGITDADQLESFRQEY 76 (225)
T ss_dssp --CCSEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHTTTTSC---HHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCCCCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHHhCCc---HHHHHHHHcCCCCHHHHHHHHHHH
Confidence 366899999999999999875 7788999999998863 3333333222221 11111110 000
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
...+.+.+. ....++|++.++|+.|++.|++++++|| +....+...++.+|+..+|+.+ ++.++..
T Consensus 77 ~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------- 142 (225)
T 3d6j_A 77 SKEADIYMN-ANTILFPDTLPTLTHLKKQGIRIGIIST---KYRFRILSFLRNHMPDDWFDII-IGGEDVT--------- 142 (225)
T ss_dssp HHHHHHHTG-GGCEECTTHHHHHHHHHHHTCEEEEECS---SCHHHHHHHHHTSSCTTCCSEE-ECGGGCS---------
T ss_pred HHHHHHhcc-ccCccCcCHHHHHHHHHHCCCeEEEEEC---CCHHHHHHHHHHcCchhheeee-eehhhcC---------
Confidence 122222222 2356899999999999999999999999 5677888899999999988864 4443322
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
..||+|.+ |..+++++|++++++++|||+.+|+
T Consensus 143 ---------------------------------~~k~~~~~--------------~~~~~~~~~~~~~~~i~iGD~~nDi 175 (225)
T 3d6j_A 143 ---------------------------------HHKPDPEG--------------LLLAIDRLKACPEEVLYIGDSTVDA 175 (225)
T ss_dssp ---------------------------------SCTTSTHH--------------HHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred ---------------------------------CCCCChHH--------------HHHHHHHhCCChHHeEEEcCCHHHH
Confidence 13899988 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
.+|+.+|+.++++.++
T Consensus 176 ~~~~~aG~~~~~~~~~ 191 (225)
T 3d6j_A 176 GTAAAAGVSFTGVTSG 191 (225)
T ss_dssp HHHHHHTCEEEEETTS
T ss_pred HHHHHCCCeEEEECCC
Confidence 9999999999998764
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=182.51 Aligned_cols=174 Identities=13% Similarity=0.050 Sum_probs=126.0
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHH---HHHH--------H--cccCCcHHHHHHHHHh----
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI---YTDL--------L--RKSAGDEDRMLVLFFN---- 146 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~---~~~~--------~--~~~~~~~~~~~~~~~~---- 146 (323)
+|+|+||+||||+|+... +..++.++++++|... .... +... . +...............
T Consensus 4 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 79 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLNIM-LDEFSHQLAKISGLHI---KDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKV 79 (235)
T ss_dssp CCEEEECCBTTTBCHHHH-HHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTC
T ss_pred ceEEEEeCCCCCCCcchh-HHHHHHHHHHHcCCCC---cHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCC
Confidence 689999999999999875 7788899999988763 1211 2111 0 1111100011111110
Q ss_pred ----H---HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCC---hHHHHHHHHHcCCCccccceeechhh
Q 020675 147 ----R---KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG---DRIARSVVEKLGSERISKIKIVGNEE 216 (323)
Q Consensus 147 ----~---~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~---~~~~~~~l~~lgl~~~fd~~v~s~~~ 216 (323)
. .+.+.+.. .. ..++|++.++|+.|+++|++++++|| +. ...+...++.+|+..+|+.+ +++++
T Consensus 80 ~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~~~~l~~~~l~~~f~~~-~~~~~ 153 (235)
T 2om6_A 80 DVELVKRATARAILNV-DE-SLVLEGTKEALQFVKERGLKTAVIGN---VMFWPGSYTRLLLERFGLMEFIDKT-FFADE 153 (235)
T ss_dssp CHHHHHHHHHHHHHHC-CG-GGBCTTHHHHHHHHHHTTCEEEEEEC---CCSSCHHHHHHHHHHTTCGGGCSEE-EEHHH
T ss_pred CHHHHHHHHHHHHHhc-cc-cCcCccHHHHHHHHHHCCCEEEEEcC---CcccchhHHHHHHHhCCcHHHhhhh-eeccc
Confidence 0 11222211 11 23699999999999999999999999 55 67788899999999999875 44443
Q ss_pred hhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 020675 217 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 296 (323)
Q Consensus 217 ~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~ 296 (323)
.. ..||+|++ |+.+++++|++|++
T Consensus 154 ~~------------------------------------------~~kp~~~~--------------~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 154 VL------------------------------------------SYKPRKEM--------------FEKVLNSFEVKPEE 177 (235)
T ss_dssp HT------------------------------------------CCTTCHHH--------------HHHHHHHTTCCGGG
T ss_pred cC------------------------------------------CCCCCHHH--------------HHHHHHHcCCCccc
Confidence 32 24999999 99999999999999
Q ss_pred EEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 297 CFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 297 ~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
|++|||+. +|+++|+++|+.++++.++
T Consensus 178 ~~~iGD~~~nDi~~a~~aG~~~~~~~~~ 205 (235)
T 2om6_A 178 SLHIGDTYAEDYQGARKVGMWAVWINQE 205 (235)
T ss_dssp EEEEESCTTTTHHHHHHTTSEEEEECTT
T ss_pred eEEECCChHHHHHHHHHCCCEEEEECCC
Confidence 99999999 9999999999999998764
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=182.21 Aligned_cols=172 Identities=17% Similarity=0.241 Sum_probs=123.6
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCC--------------cHHHHHHHHHh-HH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG--------------DEDRMLVLFFN-RK 148 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~-~~ 148 (323)
+|+|+||+||||+|+... +..++.++++++|... +....+....+.... ...... .... ..
T Consensus 2 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 77 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING--VDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFK-ELAKRKN 77 (221)
T ss_dssp CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC--CSHHHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHH-HHHHHHH
T ss_pred CcEEEECCCCcccCChHH-HHHHHHHHHHHcCCCC--CCHHHHHHhCCCCHHHHHHHHHHHhCCCCChHHHH-HHHHHHH
Confidence 689999999999999875 7788999999998861 222222111111100 000000 0010 01
Q ss_pred HHHHHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 149 NALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 149 ~~~~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.+.+.+.. ....++||+.++|+.|++.|++++++|| + ......++.+|+..+|+.+ +++++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~--~~~~~~l~~~~l~~~f~~~-~~~~~~~--------- 142 (221)
T 2wf7_A 78 DNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASA---S--KNGPFLLERMNLTGYFDAI-ADPAEVA--------- 142 (221)
T ss_dssp HHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCC---C--TTHHHHHHHTTCGGGCSEE-CCTTTSS---------
T ss_pred HHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcC---c--HHHHHHHHHcChHHHcceE-eccccCC---------
Confidence 223332222 1356889999999999999999999999 3 3467788899999999874 4443332
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+
T Consensus 143 ---------------------------------~~Kp~~~~--------------~~~~~~~lgi~~~~~i~iGD~~nDi 175 (221)
T 2wf7_A 143 ---------------------------------ASKPAPDI--------------FIAAAHAVGVAPSESIGLEDSQAGI 175 (221)
T ss_dssp ---------------------------------SCTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHH
T ss_pred ---------------------------------CCCCChHH--------------HHHHHHHcCCChhHeEEEeCCHHHH
Confidence 23999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEc
Q 020675 308 AGAQRIGMPCVVMR 321 (323)
Q Consensus 308 ~aA~~aG~~~v~v~ 321 (323)
++|+++|+.++++.
T Consensus 176 ~~a~~aG~~~~~~~ 189 (221)
T 2wf7_A 176 QAIKDSGALPIGVG 189 (221)
T ss_dssp HHHHHHTCEEEEES
T ss_pred HHHHHCCCEEEEEC
Confidence 99999999999985
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=187.52 Aligned_cols=178 Identities=13% Similarity=0.092 Sum_probs=127.0
Q ss_pred CCCCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccC-------------CcHHHHHHH-
Q 020675 78 SQNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA-------------GDEDRMLVL- 143 (323)
Q Consensus 78 ~~~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~- 143 (323)
....|.+|+|+||+||||+|+... +..++.++++++|++. ........+.+... .........
T Consensus 16 ~~~~m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (254)
T 3umc_A 16 NLYFQGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGTL--PCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQS 92 (254)
T ss_dssp -CCSSSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSCC--CHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHH
T ss_pred cccccCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHH
Confidence 345688999999999999998875 7899999999999873 22222222222110 000111100
Q ss_pred ---HHhH------HHHHHHHHh-cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeec
Q 020675 144 ---FFNR------KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 213 (323)
Q Consensus 144 ---~~~~------~~~~~~~i~-~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s 213 (323)
.... ......+.. .....++|++.++|+.|++. ++++++|| +....+..+++.+|+. |+.+ ++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~g~~--f~~~-~~ 165 (254)
T 3umc_A 93 LEALAGEFGLALDEALLQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSN---GNTALMLDVARHAGLP--WDML-LC 165 (254)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCS---SCHHHHHHHHHHHTCC--CSEE-CC
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeC---CCHHHHHHHHHHcCCC--cceE-Ee
Confidence 0000 011111111 12356899999999999986 99999999 5678888999999986 7763 44
Q ss_pred hhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC
Q 020675 214 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~ 293 (323)
+++.. ..||+|++ |+.+++++|++
T Consensus 166 ~~~~~------------------------------------------~~kp~~~~--------------~~~~~~~lgi~ 189 (254)
T 3umc_A 166 ADLFG------------------------------------------HYKPDPQV--------------YLGACRLLDLP 189 (254)
T ss_dssp HHHHT------------------------------------------CCTTSHHH--------------HHHHHHHHTCC
T ss_pred ecccc------------------------------------------cCCCCHHH--------------HHHHHHHcCCC
Confidence 44332 24999999 99999999999
Q ss_pred CCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 294 VRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 294 p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
|++|++|||+.+|+++|+++|+.++++.
T Consensus 190 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 217 (254)
T 3umc_A 190 PQEVMLCAAHNYDLKAARALGLKTAFIA 217 (254)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred hHHEEEEcCchHhHHHHHHCCCeEEEEe
Confidence 9999999999999999999999999997
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.8e-24 Score=183.46 Aligned_cols=173 Identities=13% Similarity=0.135 Sum_probs=120.4
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHc--------ccCCcHHHHHHHHHhH------H
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR--------KSAGDEDRMLVLFFNR------K 148 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~------~ 148 (323)
.+|+|+|||||||+|+... +. ..++.++|++. ..+.+..+.+ ................ .
T Consensus 4 m~k~iiFDlDGTL~d~~~~-~~---~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 76 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNRE-ES---IRRFKAIGVAD---IEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTY 76 (211)
T ss_dssp CCSEEEECSBTTTEEECHH-HH---HHHHHHTTCTT---HHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCH
T ss_pred cceEEEEeCCCeeEecchH-HH---HHHHHHhCCch---HHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCH
Confidence 4789999999999998863 22 66677777752 1221111110 0000112221111111 1
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH------cCCCccccceeechhhhhhhhh
Q 020675 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK------LGSERISKIKIVGNEEVERSLY 222 (323)
Q Consensus 149 ~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~------lgl~~~fd~~v~s~~~~~~~~~ 222 (323)
+.+.+........++||+.++|+.|++ |++++|+|| +....+..+++. +|+..+|+.+ +++++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~---~~~~~~~~~~~~l~~~~~~~l~~~f~~~-~~~~~~~---- 147 (211)
T 2i6x_A 77 QQVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSN---TNPYVLDLAMSPRFLPSGRTLDSFFDKV-YASCQMG---- 147 (211)
T ss_dssp HHHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEEC---CCHHHHHHHTSTTSSTTCCCGGGGSSEE-EEHHHHT----
T ss_pred HHHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeC---CCHHHHHHHHhhhccccccCHHHHcCeE-EeecccC----
Confidence 122222222234689999999999999 999999999 567778888888 7999999875 4443332
Q ss_pred cccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 020675 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (323)
Q Consensus 223 ~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGD 302 (323)
..||+|++ |+.+++++|++|++|++|||
T Consensus 148 --------------------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~igD 175 (211)
T 2i6x_A 148 --------------------------------------KYKPNEDI--------------FLEMIADSGMKPEETLFIDD 175 (211)
T ss_dssp --------------------------------------CCTTSHHH--------------HHHHHHHHCCCGGGEEEECS
T ss_pred --------------------------------------CCCCCHHH--------------HHHHHHHhCCChHHeEEeCC
Confidence 24999999 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEEcCC
Q 020675 303 SQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 303 s~~Di~aA~~aG~~~v~v~~g 323 (323)
+.+|+.+|+++|+.++++.++
T Consensus 176 ~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 176 GPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp CHHHHHHHHHTTCEEECCCTT
T ss_pred CHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999998764
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-24 Score=190.66 Aligned_cols=172 Identities=14% Similarity=0.179 Sum_probs=120.1
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHH-HHHHH---HcccC---------CcHHHHHHHHHhH-
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDL---LRKSA---------GDEDRMLVLFFNR- 147 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~~---~~~~~---------~~~~~~~~~~~~~- 147 (323)
|++|+|+||+||||+|+... +..++.+++.++|++. +.+ .+..+ ++... ......... +..
T Consensus 1 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~-~~~~ 75 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVGFKPV-FYEKVYQVLKDNGYDL---DLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYI-LGIY 75 (220)
T ss_dssp CCCCEEEECSBTTTEEEEET-THHHHHHHHHHTTCCC---CHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHH-HTCC
T ss_pred CCceEEEEcCCCceeccccc-HHHHHHHHHHHhCCCC---CHHHHHHHHHHHhhhccCCCccccccccHHHHHHH-cCCC
Confidence 56789999999999999985 8899999999999873 332 33332 22211 001122111 110
Q ss_pred --HHHHHHHHh----cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhh
Q 020675 148 --KNALDEFLA----SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 221 (323)
Q Consensus 148 --~~~~~~~i~----~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~ 221 (323)
.+...++.. ....+++||+.++|+.|+++|++++|+|| +.. .+...++.+|+..+|+.+ +++++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn---~~~-~~~~~l~~~gl~~~f~~~-~~~~~~~--- 147 (220)
T 2zg6_A 76 PSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSN---ASP-RVKTLLEKFDLKKYFDAL-ALSYEIK--- 147 (220)
T ss_dssp CCHHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCS---CHH-HHHHHHHHHTCGGGCSEE-C---------
T ss_pred CcHHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeC---CcH-HHHHHHHhcCcHhHeeEE-EeccccC---
Confidence 111222211 12356899999999999999999999999 434 578899999999999975 4444332
Q ss_pred hcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEc
Q 020675 222 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 301 (323)
Q Consensus 222 ~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VG 301 (323)
..||+|++ |+.+++++|++| +|||
T Consensus 148 ---------------------------------------~~Kp~~~~--------------~~~~~~~~~~~~---~~vg 171 (220)
T 2zg6_A 148 ---------------------------------------AVKPNPKI--------------FGFALAKVGYPA---VHVG 171 (220)
T ss_dssp --------------------------------------------CCH--------------HHHHHHHHCSSE---EEEE
T ss_pred ---------------------------------------CCCCCHHH--------------HHHHHHHcCCCe---EEEc
Confidence 23999999 999999999998 9999
Q ss_pred CChh-hHHHHHHcCCCEEEEcC
Q 020675 302 GSQS-GVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 302 Ds~~-Di~aA~~aG~~~v~v~~ 322 (323)
|+.+ |+.+|+++||.+|+|.+
T Consensus 172 D~~~~Di~~a~~aG~~~i~v~~ 193 (220)
T 2zg6_A 172 DIYELDYIGAKRSYVDPILLDR 193 (220)
T ss_dssp SSCCCCCCCSSSCSEEEEEBCT
T ss_pred CCchHhHHHHHHCCCeEEEECC
Confidence 9998 99999999999999875
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.90 E-value=8.2e-23 Score=183.88 Aligned_cols=177 Identities=16% Similarity=0.081 Sum_probs=126.7
Q ss_pred CCceEEEEecCCccccccc-cchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH----------------------
Q 020675 82 PRDLAVLLEVDGVLVDAYR-FGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED---------------------- 138 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------------------- 138 (323)
|.+|+|+||+||||+|+.. . +..++.++++++|+.. ....+....+.......
T Consensus 4 m~ik~i~fDlDGTLld~~~~~-~~~~~~~~l~~~G~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFA-PLEVFMEIFHKRGVAI---TAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPT 79 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCT-THHHHHHHHHTTTCCC---CHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCC
T ss_pred CCceEEEEecCCCEEeCCCcc-HHHHHHHHHHHcCCCC---CHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCC
Confidence 5689999999999999876 4 5789999999999863 33333222221100000
Q ss_pred -HHHHHHHhH-HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc-cceeechh
Q 020675 139 -RMLVLFFNR-KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNE 215 (323)
Q Consensus 139 -~~~~~~~~~-~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f-d~~v~s~~ 215 (323)
......... .+.+.+.+ .....++||+.++|+.|++.|++++++|| +....+...++.+|+..+| +. +++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~~~~~~~~~-~~~~~ 154 (267)
T 1swv_A 80 EADIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTG---YTREMMDIVAKEAALQGYKPDF-LVTPD 154 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCS---SCHHHHHHHHHHHHHTTCCCSC-CBCGG
T ss_pred HHHHHHHHHHHHHHHHHhh-ccccccCccHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCcccChHh-eecCC
Confidence 000000000 11122222 22356899999999999999999999999 5667888889999888876 65 34444
Q ss_pred hhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC-
Q 020675 216 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV- 294 (323)
Q Consensus 216 ~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p- 294 (323)
+.. ..||+|++ |..+++++|++|
T Consensus 155 ~~~------------------------------------------~~kp~~~~--------------~~~~~~~lgi~~~ 178 (267)
T 1swv_A 155 DVP------------------------------------------AGRPYPWM--------------CYKNAMELGVYPM 178 (267)
T ss_dssp GSS------------------------------------------CCTTSSHH--------------HHHHHHHHTCCSG
T ss_pred ccC------------------------------------------CCCCCHHH--------------HHHHHHHhCCCCC
Confidence 332 23999999 999999999999
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 295 RNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 295 ~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++|++|||+.+|+.+|+.+|+.+|+|.+|
T Consensus 179 ~~~i~iGD~~nDi~~a~~aG~~~i~v~~~ 207 (267)
T 1swv_A 179 NHMIKVGDTVSDMKEGRNAGMWTVGVILG 207 (267)
T ss_dssp GGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred cCEEEEeCCHHHHHHHHHCCCEEEEEcCC
Confidence 99999999999999999999999999764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=180.97 Aligned_cols=174 Identities=13% Similarity=0.051 Sum_probs=123.9
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHccc---------CCcHHHHHHH----HHhH-
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS---------AGDEDRMLVL----FFNR- 147 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~- 147 (323)
|.+|+|+||+||||+|+... +..++.++++++|++. ..+.+...+... .......... ....
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETG-IVNALQPLAKRTGKTF---TSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEW 79 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHH-HHHHTHHHHHHHTCCC---CHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEeCCCcCcCCchh-HHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHh
Confidence 45899999999999999885 8889999999999873 444333322210 0111111111 1110
Q ss_pred -----HHHHHHHHh-cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhh
Q 020675 148 -----KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 221 (323)
Q Consensus 148 -----~~~~~~~i~-~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~ 221 (323)
.+....+.. .....++||+.++|+.|++ |++++++|| +....+...++. +..+|+.+ ++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn---~~~~~~~~~l~~--l~~~fd~i-~~~~~~~--- 149 (240)
T 3smv_A 80 GLEPDAAEREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSN---IDRNEFKLSNAK--LGVEFDHI-ITAQDVG--- 149 (240)
T ss_dssp TCCCCHHHHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEES---SCHHHHHHHHTT--TCSCCSEE-EEHHHHT---
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeC---CChhHHHHHHHh--cCCccCEE-EEccccC---
Confidence 111111111 1236799999999999999 899999999 556677777766 55788875 4444442
Q ss_pred hcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHH---HHHcCCCCCcEE
Q 020675 222 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG---AEYAEKPVRNCF 298 (323)
Q Consensus 222 ~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~a---l~~lgv~p~~~v 298 (323)
..||+|++ |+.+ ++++|++|++|+
T Consensus 150 ---------------------------------------~~KP~~~~--------------~~~~l~~~~~lgi~~~~~~ 176 (240)
T 3smv_A 150 ---------------------------------------SYKPNPNN--------------FTYMIDALAKAGIEKKDIL 176 (240)
T ss_dssp ---------------------------------------SCTTSHHH--------------HHHHHHHHHHTTCCGGGEE
T ss_pred ---------------------------------------CCCCCHHH--------------HHHHHHHHHhcCCCchhEE
Confidence 24999999 8888 899999999999
Q ss_pred EEcCCh-hhHHHHHHcCCCEEEEcC
Q 020675 299 LIAGSQ-SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~v~v~~ 322 (323)
+|||+. +|+.+|+++|+.++++.+
T Consensus 177 ~vGD~~~~Di~~a~~aG~~~~~~~~ 201 (240)
T 3smv_A 177 HTAESLYHDHIPANDAGLVSAWIYR 201 (240)
T ss_dssp EEESCTTTTHHHHHHHTCEEEEECT
T ss_pred EECCCchhhhHHHHHcCCeEEEEcC
Confidence 999996 999999999999999874
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-23 Score=183.04 Aligned_cols=174 Identities=13% Similarity=-0.022 Sum_probs=124.2
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHH---HcCCCCC-CCC----HHHHHH--HHcccCCcHHHHHHH----HH--
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQ---KLGLDCA-NWT----APIYTD--LLRKSAGDEDRMLVL----FF-- 145 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~---~~g~~~~-~~~----~~~~~~--~~~~~~~~~~~~~~~----~~-- 145 (323)
|.+|+|+||+||||+|+... +..++.++++ ++|+... ... ...+.. ..+............ ..
T Consensus 11 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 89 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA 89 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT
T ss_pred CceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC
Confidence 56899999999999999885 7788887774 5676520 011 111111 222211111111000 00
Q ss_pred --------hHHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhh
Q 020675 146 --------NRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 217 (323)
Q Consensus 146 --------~~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~ 217 (323)
...+.+.+.+ .....++||+.++|+.|+ +|++++|+|| +....+...++.+|+..+|+.++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~i~~~---- 160 (251)
T 2pke_A 90 RIEARDIQRIVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITK---GDLFHQEQKIEQSGLSDLFPRIEVV---- 160 (251)
T ss_dssp CCCHHHHHHHHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEE---SCHHHHHHHHHHHSGGGTCCCEEEE----
T ss_pred CCChHHHHHHHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeC---CCHHHHHHHHHHcCcHHhCceeeee----
Confidence 0012233332 344678999999999999 9999999999 5677888999999999999875321
Q ss_pred hhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 020675 218 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 297 (323)
Q Consensus 218 ~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~ 297 (323)
.||+|++ |+.+++++|++|++|
T Consensus 161 --------------------------------------------~kp~~~~--------------~~~~~~~l~~~~~~~ 182 (251)
T 2pke_A 161 --------------------------------------------SEKDPQT--------------YARVLSEFDLPAERF 182 (251)
T ss_dssp --------------------------------------------SCCSHHH--------------HHHHHHHHTCCGGGE
T ss_pred --------------------------------------------CCCCHHH--------------HHHHHHHhCcCchhE
Confidence 1899999 999999999999999
Q ss_pred EEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 298 FLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 298 v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
++|||+. +|+.+|+++|+.+|+|.+|
T Consensus 183 i~iGD~~~~Di~~a~~aG~~~~~v~~~ 209 (251)
T 2pke_A 183 VMIGNSLRSDVEPVLAIGGWGIYTPYA 209 (251)
T ss_dssp EEEESCCCCCCHHHHHTTCEEEECCCC
T ss_pred EEECCCchhhHHHHHHCCCEEEEECCC
Confidence 9999999 9999999999999999754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=177.06 Aligned_cols=176 Identities=16% Similarity=0.190 Sum_probs=127.2
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCC------CC---C-HHHHHHHHcc---cCCcHHHHHHHHHhHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCA------NW---T-APIYTDLLRK---SAGDEDRMLVLFFNRKN 149 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~------~~---~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 149 (323)
.+|+|+||+||||+++... +..++.++++++|.... .. . .+....+... ............ ..
T Consensus 8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 83 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERV---IA 83 (226)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHH---HH
T ss_pred CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHH---HH
Confidence 3789999999999999875 77889999999988631 00 0 1111111111 001111111111 11
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
.+.+.+.. ...++|++.++|+.|++.|++++++|| +....++..++.+|+..+|+.++ +.++..
T Consensus 84 ~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~----------- 147 (226)
T 1te2_A 84 RAISLVEE-TRPLLPGVREAVALCKEQGLLVGLASA---SPLHMLEKVLTMFDLRDSFDALA-SAEKLP----------- 147 (226)
T ss_dssp HHHHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEE-ECTTSS-----------
T ss_pred HHHHHHhc-cCCcCccHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHhcCcHhhCcEEE-eccccC-----------
Confidence 22222222 256899999999999999999999999 56778888999999999998754 333221
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
..||+|.+ |+.+++++|+++++|++|||+.+|+.+
T Consensus 148 -------------------------------~~kp~~~~--------------~~~~~~~~~i~~~~~i~iGD~~nDi~~ 182 (226)
T 1te2_A 148 -------------------------------YSKPHPQV--------------YLDCAAKLGVDPLTCVALEDSVNGMIA 182 (226)
T ss_dssp -------------------------------CCTTSTHH--------------HHHHHHHHTSCGGGEEEEESSHHHHHH
T ss_pred -------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEeCCHHHHHH
Confidence 23899998 999999999999999999999999999
Q ss_pred HHHcCCCEEEEcCC
Q 020675 310 AQRIGMPCVVMRSR 323 (323)
Q Consensus 310 A~~aG~~~v~v~~g 323 (323)
|+.+|+.++++.++
T Consensus 183 a~~aG~~~~~~~~~ 196 (226)
T 1te2_A 183 SKAARMRSIVVPAP 196 (226)
T ss_dssp HHHTTCEEEECCCT
T ss_pred HHHcCCEEEEEcCC
Confidence 99999999998764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.89 E-value=7e-23 Score=181.52 Aligned_cols=175 Identities=13% Similarity=0.044 Sum_probs=125.8
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccC-------------CcHHHHHHH----
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA-------------GDEDRMLVL---- 143 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~---- 143 (323)
.|.+|+|+||+||||+|+... +..++.++++++|++. ...+....+.+... .........
T Consensus 12 ~~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (254)
T 3umg_A 12 GRNVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLEV--DAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDF 88 (254)
T ss_dssp CSBCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCC--CHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHH
T ss_pred CCCceEEEEeCCCceecCchH-HHHHHHHHHHHhcCCC--CHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 356899999999999999875 7899999999999873 22233322222100 000000000
Q ss_pred HHhH---------HHHHHHHHh-cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeec
Q 020675 144 FFNR---------KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 213 (323)
Q Consensus 144 ~~~~---------~~~~~~~i~-~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s 213 (323)
.... .+....+.. .....++||+.++|+.|++. ++++++|| +....+...++.+|+. |+.+ ++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~~~--f~~~-~~ 161 (254)
T 3umg_A 89 VLRESGIDPTNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSN---GNTSLLLDMAKNAGIP--WDVI-IG 161 (254)
T ss_dssp HHHHTTCCGGGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSS---SCHHHHHHHHHHHTCC--CSCC-CC
T ss_pred HHHHhCCCcCcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeC---CCHHHHHHHHHhCCCC--eeEE-EE
Confidence 0000 001111111 13467899999999999997 99999999 5678888999999986 7763 45
Q ss_pred hhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC
Q 020675 214 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~ 293 (323)
+++.. ..||+|.+ |+.+++++|++
T Consensus 162 ~~~~~------------------------------------------~~kp~~~~--------------~~~~~~~lgi~ 185 (254)
T 3umg_A 162 SDINR------------------------------------------KYKPDPQA--------------YLRTAQVLGLH 185 (254)
T ss_dssp HHHHT------------------------------------------CCTTSHHH--------------HHHHHHHTTCC
T ss_pred cCcCC------------------------------------------CCCCCHHH--------------HHHHHHHcCCC
Confidence 44432 24999999 99999999999
Q ss_pred CCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 294 VRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 294 p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
|++|++|||+.+|+.+|+++|+.++++.
T Consensus 186 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~ 213 (254)
T 3umg_A 186 PGEVMLAAAHNGDLEAAHATGLATAFIL 213 (254)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred hHHEEEEeCChHhHHHHHHCCCEEEEEe
Confidence 9999999999999999999999999997
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.89 E-value=7e-23 Score=178.76 Aligned_cols=170 Identities=14% Similarity=0.031 Sum_probs=120.5
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHH-------cccCCcHHH----HHHHHHh------
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL-------RKSAGDEDR----MLVLFFN------ 146 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~----~~~~~~~------ 146 (323)
+|+|+||+||||+|+... +..++.++.+.++... ........+. .....+... .......
T Consensus 8 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPF-FQEVEKQYTDLLKPYG--TSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKI 84 (234)
T ss_dssp CCEEEECCBTTTBCCHHH-HHHHHHHHHHHTGGGS--CHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCC
T ss_pred ccEEEEeCCCCCccCcch-HHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCC
Confidence 799999999999999875 6677666655544321 1111111110 000011111 0100000
Q ss_pred -------HHHHHHHHHhcCCCCCChhHHHHHHHHHHCC-CcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhh
Q 020675 147 -------RKNALDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 218 (323)
Q Consensus 147 -------~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~G-i~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~ 218 (323)
..+.+.+.+ .....++||+.++|+.|+++| ++++++|| +....+...++.+|+..+|+.++.+
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~---~~~~~~~~~l~~~~~~~~f~~~~~~----- 155 (234)
T 3ddh_A 85 AADIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATK---GDLLDQENKLERSGLSPYFDHIEVM----- 155 (234)
T ss_dssp CHHHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEE---SCHHHHHHHHHHHTCGGGCSEEEEE-----
T ss_pred CHHHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeC---CchHHHHHHHHHhCcHhhhheeeec-----
Confidence 012223322 334679999999999999999 99999999 5677888999999999999875421
Q ss_pred hhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 020675 219 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 298 (323)
Q Consensus 219 ~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v 298 (323)
.||+|++ |+.+++++|++|++|+
T Consensus 156 -------------------------------------------~kpk~~~--------------~~~~~~~lgi~~~~~i 178 (234)
T 3ddh_A 156 -------------------------------------------SDKTEKE--------------YLRLLSILQIAPSELL 178 (234)
T ss_dssp -------------------------------------------SCCSHHH--------------HHHHHHHHTCCGGGEE
T ss_pred -------------------------------------------CCCCHHH--------------HHHHHHHhCCCcceEE
Confidence 2899988 9999999999999999
Q ss_pred EEcCCh-hhHHHHHHcCCCEEEEcC
Q 020675 299 LIAGSQ-SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~v~v~~ 322 (323)
+|||+. +|+.+|+++|+.+|+|.+
T Consensus 179 ~iGD~~~~Di~~a~~aG~~~v~v~~ 203 (234)
T 3ddh_A 179 MVGNSFKSDIQPVLSLGGYGVHIPF 203 (234)
T ss_dssp EEESCCCCCCHHHHHHTCEEEECCC
T ss_pred EECCCcHHHhHHHHHCCCeEEEecC
Confidence 999996 999999999999999944
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-23 Score=188.16 Aligned_cols=174 Identities=8% Similarity=0.042 Sum_probs=112.1
Q ss_pred CCceEEEEecCCcccccccc------chHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh---------
Q 020675 82 PRDLAVLLEVDGVLVDAYRF------GNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN--------- 146 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~------~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 146 (323)
|++|+||||+||||+|++.. .+...+.+.+.++|... ...+.+..+.+.........+...+.
T Consensus 29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~ 106 (253)
T 2g80_A 29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDS--PVSNILSQFHIDNKEQLQAHILELVAKDVKDPILK 106 (253)
T ss_dssp CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTS--HHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHH
T ss_pred CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcH--HHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHH
Confidence 45799999999999998632 03344555566555531 10111111111000000111100000
Q ss_pred H--HHHHHHHHhc--CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc--C---------CCcccccee
Q 020675 147 R--KNALDEFLAS--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--G---------SERISKIKI 211 (323)
Q Consensus 147 ~--~~~~~~~i~~--~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l--g---------l~~~fd~~v 211 (323)
. ...+.+.+.. ...+++||+.++|+. |++++|+|| ++...++..++.+ | +.++|+..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn---~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f 179 (253)
T 2g80_A 107 QLQGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSS---GSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYF 179 (253)
T ss_dssp HHHHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECS---SCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEE
T ss_pred HHHHHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeC---CCHHHHHHHHHhhcccccccccccchHhhcceEE
Confidence 0 1112222222 246789999999988 899999999 5678888888876 4 656665422
Q ss_pred echhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC
Q 020675 212 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 291 (323)
Q Consensus 212 ~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg 291 (323)
.. .+ . + .||+|++ |+.+++++|
T Consensus 180 -~~-~~-~----------------------------------------g-~KP~p~~--------------~~~a~~~lg 201 (253)
T 2g80_A 180 -DI-NT-S----------------------------------------G-KKTETQS--------------YANILRDIG 201 (253)
T ss_dssp -CH-HH-H----------------------------------------C-CTTCHHH--------------HHHHHHHHT
T ss_pred -ee-ec-c----------------------------------------C-CCCCHHH--------------HHHHHHHcC
Confidence 11 11 0 1 2999999 999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 292 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 292 v~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++|++|+||||+.+|+.+|+++||.+|+|.+
T Consensus 202 ~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 202 AKASEVLFLSDNPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp CCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred CCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence 9999999999999999999999999999965
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=180.18 Aligned_cols=104 Identities=11% Similarity=0.235 Sum_probs=92.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~--------------------- 158 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSN---GNDEMLQAALKASKLDRVLDSC-LSADDLK--------------------- 158 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEE-EEGGGTT---------------------
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHhcCcHHHcCEE-EEccccC---------------------
Confidence 67899999999999999999999999 5678889999999999999875 4444332
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 159 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 203 (240)
T 2no4_A 159 ---------------------IYKPDPRI--------------YQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVR 203 (240)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 23999999 9999999999999999999999999999999999999
Q ss_pred EcCC
Q 020675 320 MRSR 323 (323)
Q Consensus 320 v~~g 323 (323)
|.++
T Consensus 204 v~~~ 207 (240)
T 2no4_A 204 INRQ 207 (240)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9764
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=9.1e-24 Score=182.47 Aligned_cols=175 Identities=11% Similarity=0.139 Sum_probs=116.3
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHH--------cccCCcHHHHHHHHHhH------
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLL--------RKSAGDEDRMLVLFFNR------ 147 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~------ 147 (323)
+.+|+|+||+||||+|+.. ..+...+.++|... ..+.+..+. .................
T Consensus 5 ~~~k~viFDlDGTL~d~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 77 (206)
T 2b0c_A 5 EAKMLYIFDLGNVIVDIDF----NRVLGAWSDLTRIP---LASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLS 77 (206)
T ss_dssp -CCCEEEECCBTTTEEEET----HHHHHHHHHHHCCC---HHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCC
T ss_pred ccccEEEEcCCCeeecCcH----HHHHHHHHHhcCCC---HHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCC
Confidence 4578999999999999873 23344555555541 122222211 11101111211111111
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCCccccceeechhhhhhhhhcccc
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~~~fd~~v~s~~~~~~~~~~~~~ 226 (323)
.+.+.+........++||+.++|+.|+++|++++|+||. .......+++. +|+..+|+.+ +++++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~~~~~~~l~~~f~~~-~~~~~~~-------- 145 (206)
T 2b0c_A 78 YEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNT---NRLHTTFWPEEYPEIRDAADHI-YLSQDLG-------- 145 (206)
T ss_dssp HHHHHHHHHTCEEEECHHHHHHHHHHHHTTCEEEEEECC---CCCTTSCCGGGCHHHHHHCSEE-EEHHHHT--------
T ss_pred HHHHHHHHHHHhcccCccHHHHHHHHHHCCCeEEEEECC---ChHHHHHHHHhccChhhheeeE-EEecccC--------
Confidence 112222222333568999999999999999999999994 34444444555 6777888864 4443332
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
..||+|++ |+.+++++|++|++|++|||+.+|
T Consensus 146 ----------------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~D 177 (206)
T 2b0c_A 146 ----------------------------------MRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADN 177 (206)
T ss_dssp ----------------------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHH
T ss_pred ----------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEeCCCHHH
Confidence 24999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 020675 307 VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~g 323 (323)
+.+|+++|+.++++.++
T Consensus 178 i~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 178 IEGANQLGITSILVKDK 194 (206)
T ss_dssp HHHHHTTTCEEEECCST
T ss_pred HHHHHHcCCeEEEecCC
Confidence 99999999999998764
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=175.45 Aligned_cols=106 Identities=13% Similarity=0.171 Sum_probs=93.6
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
....++||+.++|+.|+++|++++++|| +....+...++.+|+..+|+.+ +++++..
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~------------------- 149 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSN---GSRHSIRQVVGNSGLTNSFDHL-ISVDEVR------------------- 149 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHTCGGGCSEE-EEGGGTT-------------------
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeC---CCHHHHHHHHHHCCChhhccee-Eehhhcc-------------------
Confidence 3467899999999999999999999999 5678889999999999999975 4444332
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
..||+|.+ |+.+++++|++|++|++|||+.+|+.+|+++|+.+
T Consensus 150 -----------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~ 192 (230)
T 3um9_A 150 -----------------------LFKPHQKV--------------YELAMDTLHLGESEILFVSCNSWDATGAKYFGYPV 192 (230)
T ss_dssp -----------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCE
T ss_pred -----------------------cCCCChHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEE
Confidence 23999999 99999999999999999999999999999999999
Q ss_pred EEEcCC
Q 020675 318 VVMRSR 323 (323)
Q Consensus 318 v~v~~g 323 (323)
+++.++
T Consensus 193 ~~~~~~ 198 (230)
T 3um9_A 193 CWINRS 198 (230)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 998764
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=176.58 Aligned_cols=104 Identities=14% Similarity=0.176 Sum_probs=92.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~--------------------- 148 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSN---GSPQSIDAVVSHAGLRDGFDHL-LSVDPVQ--------------------- 148 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEE-EESGGGT---------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHhcChHhhhheE-EEecccC---------------------
Confidence 56899999999999999999999999 5678889999999999999875 4444332
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 149 ---------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 149 ---------------------VYKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTCW 193 (232)
T ss_dssp ---------------------CCTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 23999999 9999999999999999999999999999999999999
Q ss_pred EcCC
Q 020675 320 MRSR 323 (323)
Q Consensus 320 v~~g 323 (323)
+.++
T Consensus 194 ~~~~ 197 (232)
T 1zrn_A 194 INRT 197 (232)
T ss_dssp ECTT
T ss_pred EcCC
Confidence 8763
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=175.68 Aligned_cols=173 Identities=17% Similarity=0.150 Sum_probs=125.6
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCC-HHHHHHHHcccCCcHHHHHHHHHh----------HHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWT-APIYTDLLRKSAGDEDRMLVLFFN----------RKNAL 151 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 151 (323)
.+|+|+||+||||+|+... +..++.++++++|... . ...+....+.............+. ..+.+
T Consensus 3 ~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYPI---SVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLL 78 (229)
T ss_dssp CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCC---CHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHHHH
T ss_pred CccEEEEcCCCCcCccHHH-HHHHHHHHHHHhCCCC---CHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 3789999999999999875 7788999999999863 3 333433333221111111100000 01222
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc-cceeechhhhhhhhhcccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f-d~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
.+... ....++||+.++|+.|+. +++++|| +....+...++.+|+..+| +.+ +++++.
T Consensus 79 ~~~~~-~~~~~~~~~~~~l~~l~~---~~~i~s~---~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~------------- 137 (229)
T 2fdr_A 79 DMRLE-RDVKIIDGVKFALSRLTT---PRCICSN---SSSHRLDMMLTKVGLKPYFAPHI-YSAKDL------------- 137 (229)
T ss_dssp HHHHH-HHCCBCTTHHHHHHHCCS---CEEEEES---SCHHHHHHHHHHTTCGGGTTTCE-EEHHHH-------------
T ss_pred HHHhh-cCCccCcCHHHHHHHhCC---CEEEEEC---CChhHHHHHHHhCChHHhccceE-Eecccc-------------
Confidence 22211 235689999999998874 9999999 5678888999999999999 653 454433
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhc--CCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASML--KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~--KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
+.. ||+|.+ |+.+++++|++|++|++|||+.+|+.
T Consensus 138 -----------------------------~~~~~kpk~~~--------------~~~~~~~l~~~~~~~i~iGD~~~Di~ 174 (229)
T 2fdr_A 138 -----------------------------GADRVKPKPDI--------------FLHGAAQFGVSPDRVVVVEDSVHGIH 174 (229)
T ss_dssp -----------------------------CTTCCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHHHH
T ss_pred -----------------------------ccCCCCcCHHH--------------HHHHHHHcCCChhHeEEEcCCHHHHH
Confidence 235 899998 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcCC
Q 020675 309 GAQRIGMPCVVMRSR 323 (323)
Q Consensus 309 aA~~aG~~~v~v~~g 323 (323)
+|+++|+.+|++.++
T Consensus 175 ~a~~aG~~~i~~~~~ 189 (229)
T 2fdr_A 175 GARAAGMRVIGFTGA 189 (229)
T ss_dssp HHHHTTCEEEEECCS
T ss_pred HHHHCCCEEEEEecC
Confidence 999999999998763
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=177.73 Aligned_cols=105 Identities=12% Similarity=0.155 Sum_probs=92.9
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
...++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~-------------------- 152 (233)
T 3umb_A 97 CLSAFPENVPVLRQLREMGLPLGILSN---GNPQMLEIAVKSAGMSGLFDHV-LSVDAVR-------------------- 152 (233)
T ss_dssp SCEECTTHHHHHHHHHTTTCCEEEEES---SCHHHHHHHHHTTTCTTTCSEE-EEGGGTT--------------------
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeC---CCHHHHHHHHHHCCcHhhcCEE-EEecccC--------------------
Confidence 367899999999999999999999999 5678889999999999999975 4444332
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.++
T Consensus 153 ----------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~ 196 (233)
T 3umb_A 153 ----------------------LYKTAPAA--------------YALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTF 196 (233)
T ss_dssp ----------------------CCTTSHHH--------------HTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------CCCcCHHH--------------HHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEE
Confidence 24999999 999999999999999999999999999999999999
Q ss_pred EEcCC
Q 020675 319 VMRSR 323 (323)
Q Consensus 319 ~v~~g 323 (323)
+|.++
T Consensus 197 ~v~~~ 201 (233)
T 3umb_A 197 WINRL 201 (233)
T ss_dssp EECTT
T ss_pred EEcCC
Confidence 98764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=182.85 Aligned_cols=173 Identities=12% Similarity=0.055 Sum_probs=125.5
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh----------HHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----------RKNAL 151 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 151 (323)
|.+|+|+||+||||+|+... +..++.++++++|.. .....+....+. ........... ....+
T Consensus 33 m~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~G~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (275)
T 2qlt_A 33 LKINAALFDVDGTIIISQPA-IAAFWRDFGKDKPYF---DAEHVIHISHGW---RTYDAIAKFAPDFADEEYVNKLEGEI 105 (275)
T ss_dssp EEESEEEECCBTTTEECHHH-HHHHHHHHHTTCTTC---CHHHHHHHCTTC---CHHHHHHHHCGGGCCHHHHHHHHHTH
T ss_pred ccCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCCC---CHHHHHHHhcCC---CHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 34799999999999999885 778899999888831 112222211121 11111111110 01122
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHC-CCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~-Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
.+.+ .....++||+.++|+.|+++ |++++++|| +....+...++.+|+.. |+.+ +++++...
T Consensus 106 ~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~---~~~~~~~~~l~~~~l~~-f~~i-~~~~~~~~----------- 168 (275)
T 2qlt_A 106 PEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATS---GTRDMAKKWFDILKIKR-PEYF-ITANDVKQ----------- 168 (275)
T ss_dssp HHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECS---SCHHHHHHHHHHHTCCC-CSSE-ECGGGCSS-----------
T ss_pred HHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeC---CCHHHHHHHHHHcCCCc-cCEE-EEcccCCC-----------
Confidence 2222 23466899999999999999 999999999 56788889999999874 6654 45444322
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCC-------CCCcEEEEcCC
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-------PVRNCFLIAGS 303 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv-------~p~~~v~VGDs 303 (323)
.||+|++ |+.+++++|+ +|++|++|||+
T Consensus 169 -------------------------------~kp~~~~--------------~~~~~~~lgi~~~~~~~~~~~~i~~GDs 203 (275)
T 2qlt_A 169 -------------------------------GKPHPEP--------------YLKGRNGLGFPINEQDPSKSKVVVFEDA 203 (275)
T ss_dssp -------------------------------CTTSSHH--------------HHHHHHHTTCCCCSSCGGGSCEEEEESS
T ss_pred -------------------------------CCCChHH--------------HHHHHHHcCCCccccCCCcceEEEEeCC
Confidence 3999999 9999999999 99999999999
Q ss_pred hhhHHHHHHcCCCEEEEcCC
Q 020675 304 QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~~g 323 (323)
.+|+++|+++|+.+|+|.++
T Consensus 204 ~nDi~~a~~AG~~~i~v~~~ 223 (275)
T 2qlt_A 204 PAGIAAGKAAGCKIVGIATT 223 (275)
T ss_dssp HHHHHHHHHTTCEEEEESSS
T ss_pred HHHHHHHHHcCCEEEEECCC
Confidence 99999999999999998764
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8.5e-22 Score=172.90 Aligned_cols=103 Identities=16% Similarity=0.254 Sum_probs=91.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.++|+.|+++ ++++++|| +....+...++.+|+..+|+.+ +++++..
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~~~~~f~~~-~~~~~~~--------------------- 152 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITD---SDTEQAMAFLDALGIKDLFDSI-TTSEEAG--------------------- 152 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEES---SCHHHHHHHHHHTTCGGGCSEE-EEHHHHT---------------------
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEEC---CCHHHHHHHHHHcCcHHHccee-EeccccC---------------------
Confidence 56899999999999999 99999999 5678889999999999999975 4444332
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 318 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|++|||+. +|+.+|+++|+.++
T Consensus 153 ---------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (234)
T 3u26_A 153 ---------------------FFKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (234)
T ss_dssp ---------------------BCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred ---------------------CCCcCHHH--------------HHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEE
Confidence 24999999 9999999999999999999997 99999999999999
Q ss_pred EEcCC
Q 020675 319 VMRSR 323 (323)
Q Consensus 319 ~v~~g 323 (323)
+|.++
T Consensus 198 ~v~~~ 202 (234)
T 3u26_A 198 LLDRK 202 (234)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 99764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-22 Score=182.11 Aligned_cols=178 Identities=11% Similarity=0.108 Sum_probs=121.2
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHc-----CCCCCCCCHHHHHHHHc----ccCCcHHHHHHHHHh-HHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-----GLDCANWTAPIYTDLLR----KSAGDEDRMLVLFFN-RKNAL 151 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~-----g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~ 151 (323)
..+|+|+||+||||+|+... +..++.+++.++ |+. ......+.. ..+.....+... .. ..+.+
T Consensus 55 ~~~k~i~FDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~ 127 (282)
T 3nuq_A 55 PNLKVFFFDIDNCLYKSSTR-IHDLMQQSILRFFQTHLKLS-----PEDAHVLNNSYYKEYGLAIRGLVMF-HKVNALEY 127 (282)
T ss_dssp CCCCEEEECCTTTTSCCCHH-HHHHHHHHHHHHHHHCTTSC-----HHHHHHHHHHHHHHTHHHHHHHHHT-TSSCHHHH
T ss_pred CCCCEEEEecCCCcccCCcc-HHHHHHHHHHHHHHHhcCCC-----HHHHHHHHHHHHHHHhhhHHHHHHH-cCCCHHHH
Confidence 45799999999999998764 666666666553 543 222111111 000001111100 00 01222
Q ss_pred HHHHh-----cCCCCCChhHHHHHHHHHHCCC--cEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcc
Q 020675 152 DEFLA-----SKDAPLRPGVEDFVDDAYNEGI--PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (323)
Q Consensus 152 ~~~i~-----~~~~~l~pgv~elL~~Lk~~Gi--~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~ 224 (323)
.+.+. .....++||+.++|+.|+++|+ +++|+|| +....+...++.+|+..+|+.++ ++++...
T Consensus 128 ~~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn---~~~~~~~~~l~~~gl~~~fd~v~-~~~~~~~----- 198 (282)
T 3nuq_A 128 NRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTN---AYKNHAIRCLRLLGIADLFDGLT-YCDYSRT----- 198 (282)
T ss_dssp HHHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECS---SCHHHHHHHHHHHTCTTSCSEEE-CCCCSSC-----
T ss_pred HHHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEEC---CChHHHHHHHHhCCcccccceEE-EeccCCC-----
Confidence 22221 1236789999999999999999 9999999 66788999999999999999854 3332211
Q ss_pred cccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC-CcEEEEcCC
Q 020675 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGS 303 (323)
Q Consensus 225 ~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p-~~~v~VGDs 303 (323)
.+ ...||+|++ |+.+++++|++| ++|++|||+
T Consensus 199 -----~~----------------------------~~~Kp~~~~--------------~~~~~~~lgi~~~~~~i~vGD~ 231 (282)
T 3nuq_A 199 -----DT----------------------------LVCKPHVKA--------------FEKAMKESGLARYENAYFIDDS 231 (282)
T ss_dssp -----SS----------------------------CCCTTSHHH--------------HHHHHHHHTCCCGGGEEEEESC
T ss_pred -----cc----------------------------cCCCcCHHH--------------HHHHHHHcCCCCcccEEEEcCC
Confidence 00 123999999 999999999999 999999999
Q ss_pred hhhHHHHHHcCC-CEEEEcC
Q 020675 304 QSGVAGAQRIGM-PCVVMRS 322 (323)
Q Consensus 304 ~~Di~aA~~aG~-~~v~v~~ 322 (323)
.+|+.+|+++|| .++++..
T Consensus 232 ~~Di~~a~~aG~~~~~~~~~ 251 (282)
T 3nuq_A 232 GKNIETGIKLGMKTCIHLVE 251 (282)
T ss_dssp HHHHHHHHHHTCSEEEEECS
T ss_pred HHHHHHHHHCCCeEEEEEcC
Confidence 999999999999 4555543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-22 Score=172.15 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=88.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.+ |+.|+++ ++++|+|| +....++.+++.+|+..+|+.+ +++++..
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~--------------------- 125 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSN---GSINEVKQHLERNGLLRYFKGI-FSAESVK--------------------- 125 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEES---SCHHHHHHHHHHTTCGGGCSEE-EEGGGGT---------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeC---cCHHHHHHHHHHCCcHHhCcEE-EehhhcC---------------------
Confidence 678999999 9999999 99999999 5678889999999999999875 4444432
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..||+|++ |+.+++++| |++|++|||+.+|+.+|+++||.+++
T Consensus 126 ---------------------~~Kp~~~~--------------~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 126 ---------------------EYKPSPKV--------------YKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp ---------------------CCTTCHHH--------------HHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred ---------------------CCCCCHHH--------------HHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 23999999 999999999 99999999999999999999999999
Q ss_pred EcCC
Q 020675 320 MRSR 323 (323)
Q Consensus 320 v~~g 323 (323)
+.++
T Consensus 169 ~~~~ 172 (201)
T 2w43_A 169 VNRK 172 (201)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 8763
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-22 Score=172.27 Aligned_cols=112 Identities=15% Similarity=0.261 Sum_probs=93.5
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..+++||+.++|+.|+++|++++|+||........+...++.+|+..+|+.++.+.+.....
T Consensus 32 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~------------------ 93 (189)
T 3ib6_A 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPG------------------ 93 (189)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTT------------------
T ss_pred CceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccccc------------------
Confidence 36799999999999999999999999953222388999999999999999764443321100
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~ 317 (323)
+..||+|++ |+.+++++|++|++|+||||+ .+|+.+|+++||.+
T Consensus 94 ---------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~ 138 (189)
T 3ib6_A 94 ---------------------KMEKPDKTI--------------FDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHA 138 (189)
T ss_dssp ---------------------CCCTTSHHH--------------HHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEE
T ss_pred ---------------------CCCCcCHHH--------------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 124999999 999999999999999999999 79999999999999
Q ss_pred EEEcCC
Q 020675 318 VVMRSR 323 (323)
Q Consensus 318 v~v~~g 323 (323)
|+|.++
T Consensus 139 i~v~~~ 144 (189)
T 3ib6_A 139 IWLQNP 144 (189)
T ss_dssp EEECCT
T ss_pred EEECCc
Confidence 999764
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.9e-22 Score=193.76 Aligned_cols=174 Identities=13% Similarity=0.111 Sum_probs=116.2
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcc-----------cCCcHHHHHHHHHh----
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK-----------SAGDEDRMLVLFFN---- 146 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---- 146 (323)
|.+|+|+||+||||++... ..++...+...++.. ......+... ..............
T Consensus 1 M~~k~viFD~DGTL~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (555)
T 3i28_A 1 MTLRAAVFDLDGVLALPAV---FGVLGRTEEALALPR----GLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRK 73 (555)
T ss_dssp ---CEEEECTBTTTEESCT---HHHHHHHHHHTTCCT----THHHHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCeeecchh---HHHHHHHHHHhCCcH----HHHHHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHH
Confidence 5689999999999997765 377777888887763 1111111110 00111111111110
Q ss_pred --------------HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc--CCCccccce
Q 020675 147 --------------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL--GSERISKIK 210 (323)
Q Consensus 147 --------------~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l--gl~~~fd~~ 210 (323)
..+.+.+... ...++||+.++|+.|+++|++++|+||+.. ........+..+ |+..+|+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~-~~~~~~~~~~~~~~~l~~~fd~i 150 (555)
T 3i28_A 74 CSETAKVCLPKNFSIKEIFDKAIS--ARKINRPMLQAALMLRKKGFTTAILTNTWL-DDRAERDGLAQLMCELKMHFDFL 150 (555)
T ss_dssp HHHHTTCCCCTTCCHHHHHHHHHH--HCEECHHHHHHHHHHHHTTCEEEEEECCCC-CCSTTHHHHHHHHHHHHTTSSEE
T ss_pred hhhccCCCCCccccHHHHHHHhHh--hcCcChhHHHHHHHHHHCCCEEEEEeCCCc-cccchhhHHHHHhhhhhhheeEE
Confidence 0122222222 257899999999999999999999999410 112222333333 788899985
Q ss_pred eechhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc
Q 020675 211 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 290 (323)
Q Consensus 211 v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l 290 (323)
++++++.. .||+|++ |+.+++++
T Consensus 151 -~~~~~~~~------------------------------------------~KP~p~~--------------~~~~~~~l 173 (555)
T 3i28_A 151 -IESCQVGM------------------------------------------VKPEPQI--------------YKFLLDTL 173 (555)
T ss_dssp -EEHHHHTC------------------------------------------CTTCHHH--------------HHHHHHHH
T ss_pred -EeccccCC------------------------------------------CCCCHHH--------------HHHHHHHc
Confidence 55555432 4999999 99999999
Q ss_pred CCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 291 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 291 gv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
|++|++|++|||+.+|+.+|+++||.+|++.+
T Consensus 174 g~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 174 KASPSEVVFLDDIGANLKPARDLGMVTILVQD 205 (555)
T ss_dssp TCCGGGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred CCChhHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999999999999865
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=171.27 Aligned_cols=100 Identities=17% Similarity=0.195 Sum_probs=85.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
....++||+.++|+.|+++ ++++++||.. .. ++.+|+..+|+.+ +++++..
T Consensus 102 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~---~~-----l~~~~l~~~f~~~-~~~~~~~------------------- 152 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKT-FTLGVITNGN---AD-----VRRLGLADYFAFA-LCAEDLG------------------- 152 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTT-SEEEEEESSC---CC-----GGGSTTGGGCSEE-EEHHHHT-------------------
T ss_pred ccCccCcCHHHHHHHHHhC-CeEEEEECCc---hh-----hhhcCcHHHeeee-EEccccC-------------------
Confidence 3477999999999999998 9999999953 22 6788999999975 4444332
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCC
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMP 316 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~ 316 (323)
..||+|++ |+.+++++|++|++|++|||+. +|+.+|+++|+.
T Consensus 153 -----------------------~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~ 195 (230)
T 3vay_A 153 -----------------------IGKPDPAP--------------FLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMR 195 (230)
T ss_dssp -----------------------CCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCE
T ss_pred -----------------------CCCcCHHH--------------HHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCE
Confidence 24999999 9999999999999999999998 999999999999
Q ss_pred EEEEcCC
Q 020675 317 CVVMRSR 323 (323)
Q Consensus 317 ~v~v~~g 323 (323)
+++|.++
T Consensus 196 ~~~v~~~ 202 (230)
T 3vay_A 196 AIWYNPQ 202 (230)
T ss_dssp EEEECTT
T ss_pred EEEEcCC
Confidence 9999764
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-22 Score=173.27 Aligned_cols=180 Identities=10% Similarity=0.094 Sum_probs=112.7
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH----HHHHHHHHhc
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR----KNALDEFLAS 157 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~ 157 (323)
+.+|+|+||+||||+|++.. .++++.+|... ...+.+....+... .....+...+.. .+.+.+++..
T Consensus 12 ~~~k~viFD~DGTLvd~~~~------~~~~~~~g~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEGI------DELAKICGVED--AVSEMTRRAMGGAV-PFKAALTERLALIQPSREQVQRLIAE 82 (225)
T ss_dssp HHCSEEEEETBTTTBSSCHH------HHHHHHTTCTT--TC-------------CHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred hhCCEEEEeCcccccccccH------HHHHHHhCCcH--HHHHHHHHHHcCCc-cHHHHHHHHHHHhcCCHHHHHHHHHh
Confidence 45789999999999998753 56788888763 12333333332111 111221111111 2334444444
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC--ccccceeechhhhhhhhhcccccccccccCc
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~--~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
...+++||+.++|+.|+++|++++|+|| +....++.+++.+|+. .+|+..+....+. .+.+..... .
T Consensus 83 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~-------~~~~~~~~~-~ 151 (225)
T 1nnl_A 83 QPPHLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIPATNVFANRLKFYFNG-------EYAGFDETQ-P 151 (225)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCCGGGEEEECEEECTTS-------CEEEECTTS-G
T ss_pred ccCCCCccHHHHHHHHHHCCCcEEEEeC---ChHHHHHHHHHHcCCCcccEEeeeEEEcCCC-------cEecCCCCC-c
Confidence 4577999999999999999999999999 6778899999999997 4777543111000 000000000 0
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
. ...||.|++ |+.+++++|+ ++|++|||+.+|+.+|+++|+
T Consensus 152 ~-----------------------~~~~~Kp~~--------------~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~ 192 (225)
T 1nnl_A 152 T-----------------------AESGGKGKV--------------IKLLKEKFHF--KKIIMIGDGATDMEACPPADA 192 (225)
T ss_dssp G-----------------------GSTTHHHHH--------------HHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE
T ss_pred c-----------------------cCCCchHHH--------------HHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe
Confidence 0 000233345 8899999998 789999999999999999999
Q ss_pred CEEEEc
Q 020675 316 PCVVMR 321 (323)
Q Consensus 316 ~~v~v~ 321 (323)
+|++.
T Consensus 193 -~i~~~ 197 (225)
T 1nnl_A 193 -FIGFG 197 (225)
T ss_dssp -EEEEC
T ss_pred -EEEec
Confidence 88775
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.7e-22 Score=174.26 Aligned_cols=167 Identities=14% Similarity=0.150 Sum_probs=118.1
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHH---HHHHHccc-CCcHHHHHHHHHhH----------H
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPI---YTDLLRKS-AGDEDRMLVLFFNR----------K 148 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~----------~ 148 (323)
.+|+|+||+||||+|+... +..+++++++++|++. .... +..+.... .......+..+... .
T Consensus 10 ~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (231)
T 2p11_A 10 HDIVFLFDCDNTLLDNDHV-LADLRAHMMREFGAQN---SARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLLMS 85 (231)
T ss_dssp CSEEEEECCBTTTBCHHHH-HHHHHHHHHHHHCHHH---HHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGGGH
T ss_pred CCeEEEEcCCCCCEecHHH-HHHHHHHHHHHcCCCc---chHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHHHH
Confidence 5789999999999999986 8899999999998752 1111 22221111 11112222111110 1
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccc
Q 020675 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 149 ~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
+.+.+. ....+++||+.++|+.|+++| +++|+|| +....++..++.+|+.++|+..+...
T Consensus 86 ~~~~~~--~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn---~~~~~~~~~l~~~gl~~~f~~~~~~~-------------- 145 (231)
T 2p11_A 86 SFLIDY--PFASRVYPGALNALRHLGARG-PTVILSD---GDVVFQPRKIARSGLWDEVEGRVLIY-------------- 145 (231)
T ss_dssp HHHHHC--CGGGGBCTTHHHHHHHHHTTS-CEEEEEE---CCSSHHHHHHHHTTHHHHTTTCEEEE--------------
T ss_pred HHHHHH--HHhCCcCccHHHHHHHHHhCC-CEEEEeC---CCHHHHHHHHHHcCcHHhcCeeEEec--------------
Confidence 122221 123578999999999999999 9999999 56688999999999998887643210
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh---
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS--- 305 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~--- 305 (323)
++.|.+ ++.+++ |++|++|+||||+.+
T Consensus 146 ----------------------------------~~K~~~--------------~~~~~~--~~~~~~~~~vgDs~~d~~ 175 (231)
T 2p11_A 146 ----------------------------------IHKELM--------------LDQVME--CYPARHYVMVDDKLRILA 175 (231)
T ss_dssp ----------------------------------SSGGGC--------------HHHHHH--HSCCSEEEEECSCHHHHH
T ss_pred ----------------------------------CChHHH--------------HHHHHh--cCCCceEEEEcCccchhh
Confidence 222455 666666 799999999999998
Q ss_pred hHHHHHHcCCCEEEEcCC
Q 020675 306 GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 306 Di~aA~~aG~~~v~v~~g 323 (323)
|+.+|+++||++|+|.+|
T Consensus 176 di~~A~~aG~~~i~v~~g 193 (231)
T 2p11_A 176 AMKKAWGARLTTVFPRQG 193 (231)
T ss_dssp HHHHHHGGGEEEEEECCS
T ss_pred hhHHHHHcCCeEEEeCCC
Confidence 999999999999999764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.6e-22 Score=167.57 Aligned_cols=105 Identities=10% Similarity=0.059 Sum_probs=86.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCCh---------------HHHHHHHHHcC--CCccccceeechhhhhhhhh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD---------------RIARSVVEKLG--SERISKIKIVGNEEVERSLY 222 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~---------------~~~~~~l~~lg--l~~~fd~~v~s~~~~~~~~~ 222 (323)
.+++||+.++|+.|+++|++++|+||. .. ..+...++.+| ++.+|...+.++++..
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~---~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~---- 98 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQ---SGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCA---- 98 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEC---TTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCS----
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECC---CccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCC----
Confidence 568999999999999999999999994 33 56677888888 5555533222222221
Q ss_pred cccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 020675 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (323)
Q Consensus 223 ~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGD 302 (323)
..||+|++ |+.+++++|++|++|+||||
T Consensus 99 --------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vGD 126 (179)
T 3l8h_A 99 --------------------------------------CRKPLPGM--------------YRDIARRYDVDLAGVPAVGD 126 (179)
T ss_dssp --------------------------------------SSTTSSHH--------------HHHHHHHHTCCCTTCEEEES
T ss_pred --------------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEECC
Confidence 24999999 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEEcCC
Q 020675 303 SQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 303 s~~Di~aA~~aG~~~v~v~~g 323 (323)
+.+|+++|+++||++|+|.+|
T Consensus 127 ~~~Di~~a~~aG~~~i~v~~g 147 (179)
T 3l8h_A 127 SLRDLQAAAQAGCAPWLVQTG 147 (179)
T ss_dssp SHHHHHHHHHHTCEEEEESTT
T ss_pred CHHHHHHHHHCCCcEEEECCC
Confidence 999999999999999999875
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-22 Score=172.36 Aligned_cols=110 Identities=9% Similarity=0.123 Sum_probs=88.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
.+++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.++...+.. +.....+. +
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----~~~~~~~~-~-------- 137 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSG---GFDLATNHYRDLLHLDAAFSNTLIVENDA----LNGLVTGH-M-------- 137 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTE----EEEEEEES-C--------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcC---CchhHHHHHHHHcCcchhccceeEEeCCE----EEeeeccC-C--------
Confidence 67999999999999999999999999 67889999999999999998764332211 11111110 0
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
...||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 138 --------------------~~~k~k~~~--------------~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 138 --------------------MFSHSKGEM--------------LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp --------------------CSTTHHHHH--------------HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred --------------------CCCCChHHH--------------HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 113777777 9999999999999999999999999999999999876
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.4e-21 Score=170.14 Aligned_cols=102 Identities=11% Similarity=0.148 Sum_probs=90.3
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
...++||+.++|+.|+ |++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 91 ~~~~~~~~~~~l~~l~--g~~~~i~t~---~~~~~~~~~l~~~gl~~~f~~~-~~~~~~~-------------------- 144 (253)
T 1qq5_A 91 RLTPYPDAAQCLAELA--PLKRAILSN---GAPDMLQALVANAGLTDSFDAV-ISVDAKR-------------------- 144 (253)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEES---SCHHHHHHHHHHTTCGGGCSEE-EEGGGGT--------------------
T ss_pred cCCCCccHHHHHHHHc--CCCEEEEeC---cCHHHHHHHHHHCCchhhccEE-EEccccC--------------------
Confidence 3578999999999999 999999999 5678889999999999999875 4444432
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+.++
T Consensus 145 ----------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~ 188 (253)
T 1qq5_A 145 ----------------------VFKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188 (253)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------CCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEE
Confidence 23999999 999999999999999999999999999999999999
Q ss_pred EEcC
Q 020675 319 VMRS 322 (323)
Q Consensus 319 ~v~~ 322 (323)
++.+
T Consensus 189 ~~~~ 192 (253)
T 1qq5_A 189 RVAR 192 (253)
T ss_dssp EECC
T ss_pred EECC
Confidence 9975
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.5e-22 Score=172.77 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=80.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.++|+.|+++|++++|+|| .....+ ++.++ .+|+.+ +++++...
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~---~~~~~~---~~~~~--~~~d~v-~~~~~~~~-------------------- 85 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDE---LPEALS---TPLAA--PVNDWM-IAAPRPTA-------------------- 85 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECC---SCHHHH---HHHHT--TTTTTC-EECCCCSS--------------------
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcC---ChHHHH---HHhcC--ccCCEE-EECCcCCC--------------------
Confidence 56899999999999999999999999 344444 23333 456664 44444322
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCCCEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p-~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.||+|++ |..+++++|+.+ ++|+||||+.+||++|+++||.+|
T Consensus 86 ----------------------~KP~p~~--------------~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i 129 (196)
T 2oda_A 86 ----------------------GWPQPDA--------------CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTI 129 (196)
T ss_dssp ----------------------CTTSTHH--------------HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------CCCChHH--------------HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEE
Confidence 3999999 999999999976 899999999999999999999999
Q ss_pred EEcCC
Q 020675 319 VMRSR 323 (323)
Q Consensus 319 ~v~~g 323 (323)
+|.+|
T Consensus 130 ~v~~g 134 (196)
T 2oda_A 130 GLASC 134 (196)
T ss_dssp EESSS
T ss_pred EEccC
Confidence 99875
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-21 Score=178.93 Aligned_cols=178 Identities=10% Similarity=0.066 Sum_probs=120.6
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i 155 (323)
.+.+|+|+|||||||+|++.. .++...+|+.. ...+......... ......+...... .+.+.+..
T Consensus 105 ~~~~kaviFDlDGTLid~~~~------~~la~~~g~~~--~~~~~~~~~~~g~-~~~~~~l~~~~~~l~~~~~~~i~~~~ 175 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV------DEIARELGMST--QITAITQQAMEGK-LDFNASFTRRIGMLKGTPKAVLNAVC 175 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH------HHHHHHTTCHH--HHHHHHHHHHTTS-SCHHHHHHHHHHTTTTCBHHHHHHHH
T ss_pred CCCCCEEEEcCCCCccCCccH------HHHHHHhCCcH--HHHHHHHHHhcCC-CCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 457889999999999998763 44555666631 1122222222211 1111111111110 22333332
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
. .++++||+.++|+.|+++|++++|+|| +....++.+++.+|++.+|+..+...+. .+.+.+.+..
T Consensus 176 ~--~~~l~pg~~e~L~~Lk~~G~~v~IvSn---~~~~~~~~~l~~lgl~~~f~~~l~~~dg----~~tg~i~~~~----- 241 (317)
T 4eze_A 176 D--RMTLSPGLLTILPVIKAKGFKTAIISG---GLDIFTQRLKARYQLDYAFSNTVEIRDN----VLTDNITLPI----- 241 (317)
T ss_dssp H--TCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEECEEEETT----EEEEEECSSC-----
T ss_pred h--CCEECcCHHHHHHHHHhCCCEEEEEeC---ccHHHHHHHHHHcCCCeEEEEEEEeeCC----eeeeeEeccc-----
Confidence 2 367999999999999999999999999 6789999999999999999875433221 1111111110
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
...||+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+
T Consensus 242 ------------------------~~~kpkp~~--------------~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~ 283 (317)
T 4eze_A 242 ------------------------MNAANKKQT--------------LVDLAARLNIATENIIACGDGANDLPMLEHAGT 283 (317)
T ss_dssp ------------------------CCHHHHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred ------------------------CCCCCCHHH--------------HHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCC
Confidence 012777777 999999999999999999999999999999999
Q ss_pred CEEE
Q 020675 316 PCVV 319 (323)
Q Consensus 316 ~~v~ 319 (323)
.+++
T Consensus 284 ~va~ 287 (317)
T 4eze_A 284 GIAW 287 (317)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 8776
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.4e-21 Score=164.60 Aligned_cols=166 Identities=14% Similarity=0.114 Sum_probs=113.6
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCC---CCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCAN---WTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDA 160 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 160 (323)
+|+|+||+||||+| .++.++++++|++... .....+..+.+.. .......... .+.+.+.. ...
T Consensus 2 ~k~viFD~DGTL~d-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~--~~~ 68 (206)
T 1rku_A 2 MEIACLDLEGVLVP-------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQR---LRILDEHGLK-LGDIQEVI--ATL 68 (206)
T ss_dssp CEEEEEESBTTTBC-------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHH---HHHHHHTTCC-HHHHHHHH--TTC
T ss_pred CcEEEEccCCcchh-------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHHH---HHHHHHCCCC-HHHHHHHH--Hhc
Confidence 68999999999999 2457788888876200 0111111222110 0000000000 12233333 257
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++||+.++|+.|+++ ++++|+|| +....++.+++.+|+..+|+..++++++....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~-------------------- 124 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV-------------------- 124 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECTTSCEE--------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEEC---ChHHHHHHHHHHcCCcceecceeEEcCCceEE--------------------
Confidence 7999999999999999 99999999 67788999999999999995323333222100
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+..||+|++ |..+++++++.|++|+||||+.+|+.+|+++|+.+++
T Consensus 125 -------------------~~~~p~p~~--------------~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 170 (206)
T 1rku_A 125 -------------------GYQLRQKDP--------------KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp -------------------EEECCSSSH--------------HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred -------------------eeecCCCch--------------HHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE
Confidence 001488888 8999999999999999999999999999999998664
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.7e-20 Score=161.20 Aligned_cols=186 Identities=10% Similarity=0.047 Sum_probs=115.7
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCC-CC-CCC---HHHHHHHHcccCCcHHHHHHHHHhH---------
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD-CA-NWT---APIYTDLLRKSAGDEDRMLVLFFNR--------- 147 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------- 147 (323)
|.+|+||||+||||+|++.. ..|...+...+.. .. .+. ...+..+.. ...............
T Consensus 2 ~~~k~viFDlDGTL~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 77 (232)
T 3fvv_A 2 TTRRLALFDLDHTLLPLDSD---YQWADFLARTGRAGDPAEARRRNDDLMERYNR-GELTAEQAAEFMLGLLAAHSPVEL 77 (232)
T ss_dssp CCCEEEEECCBTTTBSSCHH---HHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHH-TCSCHHHHHHHHHHHHHTSCHHHH
T ss_pred CCCcEEEEeCCCCCcCCchH---HHHHHHHHHcCCCCccHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHhcCCCHHHH
Confidence 35689999999999999864 4666666666553 10 000 011111111 111111111111100
Q ss_pred HHHHHHHHhcC-CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccc
Q 020675 148 KNALDEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 148 ~~~~~~~i~~~-~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~ 226 (323)
.+.+.+++... ...++||+.++|+.|+++|++++|+|| +....++.+++.+|++.+|...+...+....
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------- 147 (232)
T 3fvv_A 78 AAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTA---TNSFVTAPIARAFGVQHLIATDPEYRDGRYT------- 147 (232)
T ss_dssp HHHHHHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCCEEEECEEEEETTEEE-------
T ss_pred HHHHHHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEEcceEEECCEEe-------
Confidence 11122222111 114799999999999999999999999 6789999999999999877664433221111
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC---CCCCcEEEEcCC
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAGS 303 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg---v~p~~~v~VGDs 303 (323)
.||.+... ..+++.. .++.+++++| ++|++|++||||
T Consensus 148 -----------------------------------g~~~~~~~--~~~~K~~---~~~~~~~~~~~~~~~~~~~~~vGDs 187 (232)
T 3fvv_A 148 -----------------------------------GRIEGTPS--FREGKVV---RVNQWLAGMGLALGDFAESYFYSDS 187 (232)
T ss_dssp -----------------------------------EEEESSCS--STHHHHH---HHHHHHHHTTCCGGGSSEEEEEECC
T ss_pred -----------------------------------eeecCCCC--cchHHHH---HHHHHHHHcCCCcCchhheEEEeCC
Confidence 13332220 1222222 2788899999 999999999999
Q ss_pred hhhHHHHHHcCCCEEEEc
Q 020675 304 QSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~ 321 (323)
.+|+.+|+.+|+.+++..
T Consensus 188 ~~D~~~~~~ag~~~~~~~ 205 (232)
T 3fvv_A 188 VNDVPLLEAVTRPIAANP 205 (232)
T ss_dssp GGGHHHHHHSSEEEEESC
T ss_pred HhhHHHHHhCCCeEEECc
Confidence 999999999999887643
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.7e-21 Score=153.88 Aligned_cols=101 Identities=18% Similarity=0.291 Sum_probs=87.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 241 (323)
++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.+ +++++..
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~----------------------- 71 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSN---DPGGLGAAPIRELETNGVVDKV-LLSGELG----------------------- 71 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEC---SCCGGGGHHHHHHHHTTSSSEE-EEHHHHS-----------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHCChHhhccEE-EEeccCC-----------------------
Confidence 356888999999999999999999 4567778888999999999875 4443332
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 242 ~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
..||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||.+|++.
T Consensus 72 -------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~ 118 (137)
T 2pr7_A 72 -------------------VEKPEEAA--------------FQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQ 118 (137)
T ss_dssp -------------------CCTTSHHH--------------HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred -------------------CCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeC
Confidence 24999999 999999999999999999999999999999999999987
Q ss_pred C
Q 020675 322 S 322 (323)
Q Consensus 322 ~ 322 (323)
+
T Consensus 119 ~ 119 (137)
T 2pr7_A 119 Q 119 (137)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=161.52 Aligned_cols=105 Identities=17% Similarity=0.155 Sum_probs=80.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
.+++||+.++|+.|+++|++++|+|| +....++.+++ |+..+ +. ++++++..... ...+
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~l~--~l~~~-~~-v~~~~~~~~~~---~~~~----------- 134 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLE--GIVEK-DR-IYCNHASFDND---YIHI----------- 134 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHT--TTSCG-GG-EEEEEEECSSS---BCEE-----------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHh--cCCCC-Ce-EEeeeeEEcCC---ceEE-----------
Confidence 67999999999999999999999999 56777888887 87665 55 45544332100 0000
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHH-------HHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALR-------AGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~-------~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
...||+|.+. ++ .+++++|++|++|+||||+.+|+.+|++
T Consensus 135 --------------------~~~kp~p~~~-------------~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ 181 (236)
T 2fea_A 135 --------------------DWPHSCKGTC-------------SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKL 181 (236)
T ss_dssp --------------------ECTTCCCTTC-------------CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHT
T ss_pred --------------------ecCCCCcccc-------------ccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHh
Confidence 0138999931 44 7789999999999999999999999999
Q ss_pred cCCCEE
Q 020675 313 IGMPCV 318 (323)
Q Consensus 313 aG~~~v 318 (323)
+|+.++
T Consensus 182 aG~~~~ 187 (236)
T 2fea_A 182 SDLCFA 187 (236)
T ss_dssp CSEEEE
T ss_pred CCeeee
Confidence 999876
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=159.77 Aligned_cols=114 Identities=11% Similarity=0.106 Sum_probs=88.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCC---------------hHHHHHHHHHcCCCccccceeechhhhhhhhhcc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~---------------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~ 224 (323)
..++||+.++|+.|+++|++++|+|| +. ...+...++.+|+. |+.++++.+.... ...
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~-~~~- 121 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTN---QSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQG-SVE- 121 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEE---CTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTC-SSG-
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEEC---cCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCC-ccc-
Confidence 56899999999999999999999999 44 36788889999987 6654433221000 000
Q ss_pred cccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh
Q 020675 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 304 (323)
Q Consensus 225 ~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~ 304 (323)
..+..+ +..||+|++ |+.+++++|++|++|+||||+.
T Consensus 122 -~~~~~~----------------------------~~~KP~p~~--------------~~~~~~~lgi~~~~~~~VGD~~ 158 (211)
T 2gmw_A 122 -EFRQVC----------------------------DCRKPHPGM--------------LLSARDYLHIDMAASYMVGDKL 158 (211)
T ss_dssp -GGBSCC----------------------------SSSTTSCHH--------------HHHHHHHHTBCGGGCEEEESSH
T ss_pred -ccCccC----------------------------cCCCCCHHH--------------HHHHHHHcCCCHHHEEEEcCCH
Confidence 000000 234999999 9999999999999999999999
Q ss_pred hhHHHHHHcCCCE-EEEcCC
Q 020675 305 SGVAGAQRIGMPC-VVMRSR 323 (323)
Q Consensus 305 ~Di~aA~~aG~~~-v~v~~g 323 (323)
+|+.+|+++||.+ |+|.+|
T Consensus 159 ~Di~~a~~aG~~~~i~v~~g 178 (211)
T 2gmw_A 159 EDMQAAVAANVGTKVLVRTG 178 (211)
T ss_dssp HHHHHHHHTTCSEEEEESSS
T ss_pred HHHHHHHHCCCceEEEEecC
Confidence 9999999999999 999875
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-19 Score=155.26 Aligned_cols=100 Identities=12% Similarity=0.203 Sum_probs=87.4
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCC-hHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~-~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
..+++||+.++|+.|+++|++++|+|| +. ...++.+++.+|+..+|+.+++..
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~---~~~~~~~~~~l~~~gl~~~f~~~~~~~----------------------- 119 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASR---TSEIEGANQLLELFDLFRYFVHREIYP----------------------- 119 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEEC---CSCHHHHHHHHHHTTCTTTEEEEEESS-----------------------
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeC---CCChHHHHHHHHHcCcHhhcceeEEEe-----------------------
Confidence 356899999999999999999999999 55 588899999999999998753221
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
+|+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+.+
T Consensus 120 -------------------------~~k~~~--------------~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 120 -------------------------GSKITH--------------FERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp -------------------------SCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred -------------------------CchHHH--------------HHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 444555 89999999999999999999999999999999999
Q ss_pred EEEcCC
Q 020675 318 VVMRSR 323 (323)
Q Consensus 318 v~v~~g 323 (323)
|+|.+|
T Consensus 161 i~v~~g 166 (187)
T 2wm8_A 161 IHIQNG 166 (187)
T ss_dssp EECSSS
T ss_pred EEECCC
Confidence 999875
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-20 Score=164.69 Aligned_cols=99 Identities=10% Similarity=0.044 Sum_probs=75.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 241 (323)
+.||+.++|+.|+++|++++|+||.. .......++. +.++|+.++.+.+....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~---~~~~~~~l~~--l~~~f~~i~~~~~~~~~---------------------- 141 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRS---PTKTETVSKT--LADNFHIPATNMNPVIF---------------------- 141 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSC---CCSSCCHHHH--HHHHTTCCTTTBCCCEE----------------------
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCc---HHHHHHHHHH--HHHhcCccccccchhhh----------------------
Confidence 67899999999999999999999953 3333444444 44566653211111000
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 242 ~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
+..||+|++ |+.+++++|+ |+||||+.+|+.+|+++||++|+|.
T Consensus 142 ------------------~~~KP~p~~--------------~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 142 ------------------AGDKPGQNT--------------KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp ------------------CCCCTTCCC--------------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred ------------------cCCCCCHHH--------------HHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 113999999 8999999998 9999999999999999999999998
Q ss_pred CC
Q 020675 322 SR 323 (323)
Q Consensus 322 ~g 323 (323)
++
T Consensus 186 ~g 187 (211)
T 2b82_A 186 RA 187 (211)
T ss_dssp CC
T ss_pred cC
Confidence 74
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-19 Score=155.53 Aligned_cols=109 Identities=13% Similarity=0.114 Sum_probs=81.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC--ccccceeechhhhhhhhhcccccccccccCcch
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~--~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
..++||+.++|+.|+++|++++|+|| +....++..++.+|+. .+|...++...+... .. +
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~------ 142 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSG---GLSESIQPFADYLNIPRENIFAVETIWNSDGSF---KE------L------ 142 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE---EE------E------
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHcCCCcccEEEeeeeecCCCce---ec------c------
Confidence 45889999999999999999999999 6788999999999994 456533222211100 00 0
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
...||+|... ++.+++.+|++|++|++|||+.+|+.++ ++||.+
T Consensus 143 ----------------------~~~~~~~~~~-------------~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~ 186 (219)
T 3kd3_A 143 ----------------------DNSNGACDSK-------------LSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYAT 186 (219)
T ss_dssp ----------------------ECTTSTTTCH-------------HHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCS
T ss_pred ----------------------CCCCCCcccH-------------HHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCc
Confidence 0127777761 4455566799999999999999999998 689998
Q ss_pred EEEcC
Q 020675 318 VVMRS 322 (323)
Q Consensus 318 v~v~~ 322 (323)
+++..
T Consensus 187 ~~v~~ 191 (219)
T 3kd3_A 187 KFIAY 191 (219)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 77753
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-19 Score=155.62 Aligned_cols=106 Identities=13% Similarity=0.179 Sum_probs=84.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC------------ChHHHHHHHHHcCCCccccceeech----hhhhhhhhc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVGN----EEVERSLYG 223 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~------------~~~~~~~~l~~lgl~~~fd~~v~s~----~~~~~~~~~ 223 (323)
.+++||+.++|+.|+++|++++|+||...- ....+..+++.+|+. |+.++++. ++.
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~------ 112 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADEC------ 112 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCC------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccc------
Confidence 568999999999999999999999993100 456788899999997 77654441 222
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
+..||+|++ |+.+++++|++|++|+||||+
T Consensus 113 ------------------------------------~~~KP~p~~--------------~~~~~~~~gi~~~~~l~VGD~ 142 (176)
T 2fpr_A 113 ------------------------------------DCRKPKVKL--------------VERYLAEQAMDRANSYVIGDR 142 (176)
T ss_dssp ------------------------------------SSSTTSCGG--------------GGGGC----CCGGGCEEEESS
T ss_pred ------------------------------------cccCCCHHH--------------HHHHHHHcCCCHHHEEEEcCC
Confidence 134999999 899999999999999999999
Q ss_pred hhhHHHHHHcCCCEEEEcCC
Q 020675 304 QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~~g 323 (323)
.+|+.+|+++||.+|+|.++
T Consensus 143 ~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 143 ATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp HHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHHHHHcCCeEEEEcCC
Confidence 99999999999999998764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-19 Score=174.26 Aligned_cols=178 Identities=17% Similarity=0.137 Sum_probs=117.7
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i 155 (323)
...+|+|+|||||||++++.. .++...+|... ............. ......+...... .+.+.+..
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~------~~la~~~g~~~--~~~~~~~~~~~g~-~~~~~~~~~~~~~l~~~~~~~~~~~~ 252 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVI------EMLAAKAGAEG--QVAAITDAAMRGE-LDFAQSLQQRVATLAGLPATVIDEVA 252 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHH------HHHHHHTTCHH--HHHHHHHHHHTTC-SCHHHHHHHHHHTTTTCBTHHHHHHH
T ss_pred ccCCcEEEEcCcccCcCCchH------HHHHHHcCCcH--HHHHHHHHHhcCC-cCHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 445789999999999998752 44555555531 1112222222111 1111211111110 11222222
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
. .++++||+.++|+.|+++|++++|+|| ++...++.+++.+|++.+|...+...+ +.+++.+.+..
T Consensus 253 ~--~~~~~pg~~e~l~~Lk~~G~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~~d----g~~tg~~~~~v----- 318 (415)
T 3p96_A 253 G--QLELMPGARTTLRTLRRLGYACGVVSG---GFRRIIEPLAEELMLDYVAANELEIVD----GTLTGRVVGPI----- 318 (415)
T ss_dssp H--HCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCSEEEEECEEEET----TEEEEEECSSC-----
T ss_pred H--hCccCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCccceeeeeEEEeC----CEEEeeEccCC-----
Confidence 1 257999999999999999999999999 678999999999999988875432111 11111111110
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
...||+|++ |+.+++++|++|++|++|||+.+|+.+|+++|+
T Consensus 319 ------------------------~~~kpk~~~--------------~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~ 360 (415)
T 3p96_A 319 ------------------------IDRAGKATA--------------LREFAQRAGVPMAQTVAVGDGANDIDMLAAAGL 360 (415)
T ss_dssp ------------------------CCHHHHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred ------------------------CCCcchHHH--------------HHHHHHHcCcChhhEEEEECCHHHHHHHHHCCC
Confidence 012788888 999999999999999999999999999999999
Q ss_pred CEEE
Q 020675 316 PCVV 319 (323)
Q Consensus 316 ~~v~ 319 (323)
.+++
T Consensus 361 ~va~ 364 (415)
T 3p96_A 361 GIAF 364 (415)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8876
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.3e-19 Score=151.07 Aligned_cols=176 Identities=13% Similarity=0.171 Sum_probs=105.9
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH---Hh-H-HHHHHHHHhc
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF---FN-R-KNALDEFLAS 157 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~i~~ 157 (323)
.+|+|+|||||||+|+... ..+++.+|... ........... ............ .. . ...+.+.+.
T Consensus 4 ~~k~i~fDlDGTL~d~~~~------~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 73 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNETI------DEIAREAGVEE--EVKKITKEAME-GKLNFEQSLRKRVSLLKDLPIEKVEKAIK- 73 (211)
T ss_dssp CCEEEEEECCCCCBSSCHH------HHHHHHTTCHH--HHHHHHHHHHT-TSSCHHHHHHHHHHTTTTCBHHHHHHHHH-
T ss_pred CCcEEEEeCCCCCCCccHH------HHHHHHhCcHH--HHHHHHHHHHc-CCCCHHHHHHHHHHHhcCCCHHHHHHHHH-
Confidence 4689999999999998642 44555555531 00111111111 101111111110 00 0 122333332
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
..++.|++.++|+.|+++|++++++|+ +....+...++.+|+..+|+..+...+.... ....++.. .+
T Consensus 74 -~~~l~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~--- 141 (211)
T 1l7m_A 74 -RITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDGKLT----GDVEGEVL-KE--- 141 (211)
T ss_dssp -TCCBCTTHHHHHHHHHHTTEEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTEEE----EEEECSSC-ST---
T ss_pred -hCCCCccHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCCCeEEEeeeEEECCEEc----CCcccCcc-CC---
Confidence 245789999999999999999999999 5567778888999998777653322211000 00000000 00
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
++.|+. +..+++++|++|++|++|||+.+|+.+|++||+.+
T Consensus 142 -------------------------~~K~~~--------------l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~ 182 (211)
T 1l7m_A 142 -------------------------NAKGEI--------------LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI 182 (211)
T ss_dssp -------------------------THHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred -------------------------ccHHHH--------------HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEE
Confidence 111222 78899999999999999999999999999999975
Q ss_pred EE
Q 020675 318 VV 319 (323)
Q Consensus 318 v~ 319 (323)
++
T Consensus 183 ~~ 184 (211)
T 1l7m_A 183 AF 184 (211)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.8e-21 Score=168.00 Aligned_cols=48 Identities=15% Similarity=0.200 Sum_probs=45.2
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEEcCC
Q 020675 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~v~v~~g 323 (323)
.||+|.+ |+.+++++|++|++|++|||+ .+|++||+.+|+.+++|.+|
T Consensus 175 ~kpk~~~--------------~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g 223 (250)
T 2c4n_A 175 GKPSPWI--------------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 223 (250)
T ss_dssp STTSTHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSS
T ss_pred CCCCHHH--------------HHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCC
Confidence 4899988 999999999999999999999 69999999999999999875
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5.1e-20 Score=164.80 Aligned_cols=101 Identities=16% Similarity=0.152 Sum_probs=78.0
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccce--eechhhhhhhhhcccccccccccCcchhH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK--IVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~--v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
++|++.++++.|+ +|+++ ++||.. .......+..+++..+|+.. +++.++.
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 175 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKA---RYYKRKDGLALGPGPFVTALEYATDTKAM---------------------- 175 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCC---SEEEETTEEEECSHHHHHHHHHHHTCCCE----------------------
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCC---CcCcccCCcccCCcHHHHHHHHHhCCCce----------------------
Confidence 7899999999999 89999 999943 23333334556666666521 1122111
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 318 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v 318 (323)
+..||+|++ |+.+++++|++|++|++|||+. +|+.+|+++||.+|
T Consensus 176 --------------------~~~Kp~~~~--------------~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i 221 (259)
T 2ho4_A 176 --------------------VVGKPEKTF--------------FLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGI 221 (259)
T ss_dssp --------------------ECSTTSHHH--------------HHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEE
T ss_pred --------------------EecCCCHHH--------------HHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEE
Confidence 124999999 9999999999999999999998 99999999999999
Q ss_pred EEcCC
Q 020675 319 VMRSR 323 (323)
Q Consensus 319 ~v~~g 323 (323)
+|.+|
T Consensus 222 ~v~~g 226 (259)
T 2ho4_A 222 LVKTG 226 (259)
T ss_dssp EESST
T ss_pred EECCC
Confidence 99875
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.6e-21 Score=164.19 Aligned_cols=151 Identities=15% Similarity=0.101 Sum_probs=105.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH-hHHHHHHHHHh----cC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF-NRKNALDEFLA----SK 158 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~----~~ 158 (323)
.|+|+|||||||+|+... +..++++++. |++. .+.+.+..+. ....+.... ...+.+.+.+. ..
T Consensus 2 ~k~viFDlDGTL~Ds~~~-~~~~~~~~~~--g~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAG-LLRGFRRRFP--EEPH--VPLEQRRGFL------AREQYRALRPDLADKVASVYEAPGFFL 70 (193)
T ss_dssp CEEEEECSBTTTBCHHHH-HHHHHHHHST--TSCC--CCGGGCCSSC------HHHHHHHHCTTHHHHHHHHHTSTTTTT
T ss_pred CcEEEEECCCcCccchhH-HHHHHHHHhc--CCCC--CCHHHHHHhh------HHHHHHHHhHHHHHHHHHHHHhcCccc
Confidence 479999999999999986 8889988876 6641 2222211110 000000000 00112222222 22
Q ss_pred CCCCChhHHHHHHHHHHC-CCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 159 DAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~-Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
..+++||+.++|+.|+++ |++++|+||. ....++..++.+|+ |+.+ ++
T Consensus 71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~---~~~~~~~~l~~~gl---f~~i-~~------------------------ 119 (193)
T 2i7d_A 71 DLEPIPGALDAVREMNDLPDTQVFICTSP---LLKYHHCVGEKYRW---VEQH-LG------------------------ 119 (193)
T ss_dssp TCCBCTTHHHHHHHHHTSTTEEEEEEECC---CSSCTTTHHHHHHH---HHHH-HC------------------------
T ss_pred cCccCcCHHHHHHHHHhCCCCeEEEEeCC---ChhhHHHHHHHhCc---hhhh-cC------------------------
Confidence 467999999999999999 9999999994 45667778888887 6542 21
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh----HHHHH-H
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG----VAGAQ-R 312 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D----i~aA~-~ 312 (323)
..+++++|++|++|+||||+..| +.+|+ +
T Consensus 120 ----------------------------------------------~~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~ 153 (193)
T 2i7d_A 120 ----------------------------------------------PQFVERIILTRDKTVVLGDLLIDDKDTVRGQEET 153 (193)
T ss_dssp ----------------------------------------------HHHHTTEEECSCGGGBCCSEEEESSSCCCSSCSS
T ss_pred ----------------------------------------------HHHHHHcCCCcccEEEECCchhhCcHHHhhcccc
Confidence 12467899999999999999998 99999 9
Q ss_pred cCCCEEEEcC
Q 020675 313 IGMPCVVMRS 322 (323)
Q Consensus 313 aG~~~v~v~~ 322 (323)
+||.+|++.+
T Consensus 154 aG~~~i~~~~ 163 (193)
T 2i7d_A 154 PSWEHILFTC 163 (193)
T ss_dssp CSSEEEEECC
T ss_pred cccceEEEEe
Confidence 9999999875
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.5e-18 Score=162.95 Aligned_cols=117 Identities=15% Similarity=0.058 Sum_probs=94.5
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc-eeechhhhhhhhhcccccccccccCcch
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~-~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
..+++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+. .+++++++... ++...
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn---~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-------~~~~~----- 277 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATG---RPYTETVVPFENLGLLPYFEADFIATASDVLEA-------ENMYP----- 277 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-------HHHST-----
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHcCChHhcCCCEEEeccccccc-------ccccc-----
Confidence 357899999999999999999999999 567889999999999999982 35666655320 00000
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC--------------CCCCcEEEEcCC
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--------------KPVRNCFLIAGS 303 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg--------------v~p~~~v~VGDs 303 (323)
.+....||+|++ |..+++++| ++|++|+||||+
T Consensus 278 -------------------~~kp~~KP~P~~--------------~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs 324 (384)
T 1qyi_A 278 -------------------QARPLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDS 324 (384)
T ss_dssp -------------------TSCCCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESS
T ss_pred -------------------cccCCCCCCHHH--------------HHHHHHHcCCccccccccccccCCCCcCeEEEcCC
Confidence 000014999999 999999999 999999999999
Q ss_pred hhhHHHHHHcCCCEEEEcCC
Q 020675 304 QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~~g 323 (323)
.+|+.+|+++||.+|+|.+|
T Consensus 325 ~~Di~aAk~AG~~~I~V~~g 344 (384)
T 1qyi_A 325 LADLLSAQKIGATFIGTLTG 344 (384)
T ss_dssp HHHHHHHHHHTCEEEEESCB
T ss_pred HHHHHHHHHcCCEEEEECCC
Confidence 99999999999999999764
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-20 Score=164.05 Aligned_cols=152 Identities=14% Similarity=0.010 Sum_probs=106.7
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH----H-hHHHHHHHHHh
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF----F-NRKNALDEFLA 156 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~i~ 156 (323)
+++|+|+|||||||+|+... +..++++++.+++. .+.+.+. +. .....+... . ...+.|.+...
T Consensus 2 ~~~k~viFDlDGTL~Ds~~~-~~~~~~~~~~~~~~----~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (197)
T 1q92_A 2 GRALRVLVDMDGVLADFEGG-FLRKFRARFPDQPF----IALEDRR---GF---WVSEQYGRLRPGLSEKAISIWESKNF 70 (197)
T ss_dssp CCCEEEEECSBTTTBCHHHH-HHHHHHHHCTTSCC----CCGGGCC---SS---CHHHHHHHHSTTHHHHHHHHHTSTTT
T ss_pred CCceEEEEeCCCCCccCcHH-HHHHHHHHHhcCCC----CCHHHhc---CC---cHHHHHHhcCHHHHHHHHHHHHhhhh
Confidence 35689999999999999986 88999999887621 2221110 00 001111000 0 00112222111
Q ss_pred cCCCCCChhHHHHHHHHHHC-CCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechhhhhhhhhcccccccccccC
Q 020675 157 SKDAPLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~-Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
....+++||+.++|+.|+++ |++++|+||+ ....++..++++|+.+ +|+.
T Consensus 71 ~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~---~~~~~~~~l~~~~l~~~~f~~------------------------- 122 (197)
T 1q92_A 71 FFELEPLPGAVEAVKEMASLQNTDVFICTSP---IKMFKYCPYEKYAWVEKYFGP------------------------- 122 (197)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECC---CSCCSSHHHHHHHHHHHHHCG-------------------------
T ss_pred hhcCCcCcCHHHHHHHHHhcCCCeEEEEeCC---ccchHHHHHHHhchHHHhchH-------------------------
Confidence 22467999999999999999 9999999994 4456677788888776 6651
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh----HHHH
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG----VAGA 310 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D----i~aA 310 (323)
.+++++|++|++|++|||+..| +.+|
T Consensus 123 --------------------------------------------------~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a 152 (197)
T 1q92_A 123 --------------------------------------------------DFLEQIVLTRDKTVVSADLLIDDRPDITGA 152 (197)
T ss_dssp --------------------------------------------------GGGGGEEECSCSTTSCCSEEEESCSCCCCS
T ss_pred --------------------------------------------------HHHHHhccCCccEEEECcccccCCchhhhc
Confidence 2357789999999999999998 9999
Q ss_pred H-HcCCCEEEEcC
Q 020675 311 Q-RIGMPCVVMRS 322 (323)
Q Consensus 311 ~-~aG~~~v~v~~ 322 (323)
+ ++||.+|++.+
T Consensus 153 ~~~aG~~~i~~~~ 165 (197)
T 1q92_A 153 EPTPSWEHVLFTA 165 (197)
T ss_dssp CSSCSSEEEEECC
T ss_pred ccCCCceEEEecC
Confidence 9 99999999975
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-18 Score=160.69 Aligned_cols=178 Identities=13% Similarity=0.131 Sum_probs=116.3
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i 155 (323)
....++|+||+||||++.+. +.++....|... ...+......... ............. .+.+.. +
T Consensus 104 i~~~~~viFD~DgTLi~~~~------~~~~~~~~g~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~-~ 173 (335)
T 3n28_A 104 LTKPGLIVLDMDSTAIQIEC------IDEIAKLAGVGE--EVAEVTERAMQGE-LDFEQSLRLRVSKLKDAPEQILSQ-V 173 (335)
T ss_dssp TTSCCEEEECSSCHHHHHHH------HHHHHHHHTCHH--HHHHHHHHHHTTS-SCHHHHHHHHHHTTTTCBTTHHHH-H
T ss_pred ccCCCEEEEcCCCCCcChHH------HHHHHHHcCCch--HHHHHHHHHhcCC-CCHHHHHHHHHHHhcCCCHHHHHH-H
Confidence 34568999999999999443 355555566531 1112222222111 1111111111100 112222 2
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
. ..++++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+..+...+. .+++.+.+..
T Consensus 174 ~-~~~~~~pg~~~~l~~L~~~g~~~~ivS~---~~~~~~~~~~~~lgl~~~~~~~l~~~d~----~~tg~~~~~~----- 240 (335)
T 3n28_A 174 R-ETLPLMPELPELVATLHAFGWKVAIASG---GFTYFSDYLKEQLSLDYAQSNTLEIVSG----KLTGQVLGEV----- 240 (335)
T ss_dssp H-TTCCCCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETT----EEEEEEESCC-----
T ss_pred H-HhCCcCcCHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCCeEEeeeeEeeCC----eeeeeecccc-----
Confidence 2 2367999999999999999999999999 6788999999999999888764321111 1111111110
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
...||+|++ |+.+++++|++|++|++|||+.+|+.||+++|+
T Consensus 241 ------------------------~~~kpk~~~--------------~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~ 282 (335)
T 3n28_A 241 ------------------------VSAQTKADI--------------LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGL 282 (335)
T ss_dssp ------------------------CCHHHHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred ------------------------cChhhhHHH--------------HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCC
Confidence 112777777 999999999999999999999999999999999
Q ss_pred CEEE
Q 020675 316 PCVV 319 (323)
Q Consensus 316 ~~v~ 319 (323)
.+++
T Consensus 283 ~va~ 286 (335)
T 3n28_A 283 GVAY 286 (335)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 8876
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.5e-18 Score=149.34 Aligned_cols=114 Identities=13% Similarity=0.181 Sum_probs=85.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCCh---------------HHHHHHHHHcCCCccccceeechhhhhhhhhcc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD---------------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~---------------~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~ 224 (323)
..++||+.++|+.|+++|++++|+|| +.. ..+...++.+|+. |+..+.+..... +.+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn---~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~-g~~~- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTN---QSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEA-GVGP- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEE---CHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTT-CCST-
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcC---cCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCC-Ccee-
Confidence 45899999999999999999999999 444 5778889999975 443222210000 0000
Q ss_pred cccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh
Q 020675 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 304 (323)
Q Consensus 225 ~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~ 304 (323)
.....+ ...||+|.+ |+.+++++|++|++|+||||+.
T Consensus 128 -~~~~~~----------------------------~~~KP~~~~--------------~~~~~~~~~i~~~~~~~VGD~~ 164 (218)
T 2o2x_A 128 -LAIPDH----------------------------PMRKPNPGM--------------LVEAGKRLALDLQRSLIVGDKL 164 (218)
T ss_dssp -TCCSSC----------------------------TTSTTSCHH--------------HHHHHHHHTCCGGGCEEEESSH
T ss_pred -ecccCC----------------------------ccCCCCHHH--------------HHHHHHHcCCCHHHEEEEeCCH
Confidence 000000 234999999 9999999999999999999999
Q ss_pred hhHHHHHHcCCCE-EEEcCC
Q 020675 305 SGVAGAQRIGMPC-VVMRSR 323 (323)
Q Consensus 305 ~Di~aA~~aG~~~-v~v~~g 323 (323)
+|+.+|+++||.+ |+|.+|
T Consensus 165 ~Di~~a~~aG~~~~i~v~~g 184 (218)
T 2o2x_A 165 ADMQAGKRAGLAQGWLVDGE 184 (218)
T ss_dssp HHHHHHHHTTCSEEEEETCC
T ss_pred HHHHHHHHCCCCEeEEEecC
Confidence 9999999999999 999875
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.73 E-value=5.4e-18 Score=144.81 Aligned_cols=162 Identities=12% Similarity=0.095 Sum_probs=103.5
Q ss_pred ceEEE-EecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHHhc
Q 020675 84 DLAVL-LEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFLAS 157 (323)
Q Consensus 84 ~kaVi-FD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~ 157 (323)
+|.++ ||+||||+|+. ++..+.+.+|.. ............. ............. .+.+.+..
T Consensus 8 mk~ivifDlDGTL~d~~------~~~~~~~~~g~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-- 75 (201)
T 4ap9_A 8 MKKVAVIDIEGTLTDFE------FWREMARITGKR---EIEELLEKGLSGE-VEWLDSLLKRVGLIRGIDEGTFLRTR-- 75 (201)
T ss_dssp GSCEEEEECBTTTBCCC------HHHHHHHHHCCH---HHHHHHHHHHHTS-SCHHHHHHHHHHHTTTCBHHHHHHGG--
T ss_pred cceeEEecccCCCcchH------HHHHHHHHhChH---HHHHHHHHHhcCC-CCHHHHHHHHHHHhcCCCHHHHHHHH--
Confidence 45555 99999999887 346666666662 1122222222211 1111111111110 12233322
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
....++||+.++|+.|+++|++++|+|| +....++.. +.+|+..+++... ..++...
T Consensus 76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~---~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~------------------ 132 (201)
T 4ap9_A 76 EKVNVSPEARELVETLREKGFKVVLISG---SFEEVLEPF-KELGDEFMANRAI-FEDGKFQ------------------ 132 (201)
T ss_dssp GGCCCCHHHHHHHHHHHHTTCEEEEEEE---EETTTSGGG-TTTSSEEEEEEEE-EETTEEE------------------
T ss_pred HhCCCChhHHHHHHHHHHCCCeEEEEeC---CcHHHHHHH-HHcCchhheeeEE-eeCCceE------------------
Confidence 2367999999999999999999999999 456667777 8899988755432 2222111
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
+ .||.|.. ...+++++ +|++|++|||+.+|+.+|+++|+.+
T Consensus 133 ----------------------~-~~~~~~~--------------k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v 173 (201)
T 4ap9_A 133 ----------------------G-IRLRFRD--------------KGEFLKRF--RDGFILAMGDGYADAKMFERADMGI 173 (201)
T ss_dssp ----------------------E-EECCSSC--------------HHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEE
T ss_pred ----------------------C-CcCCccC--------------HHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceE
Confidence 0 1566655 55667777 8999999999999999999999974
Q ss_pred EE
Q 020675 318 VV 319 (323)
Q Consensus 318 v~ 319 (323)
++
T Consensus 174 ~~ 175 (201)
T 4ap9_A 174 AV 175 (201)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-19 Score=158.07 Aligned_cols=104 Identities=10% Similarity=0.014 Sum_probs=74.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHH-HHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARS-VVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~-~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++|++.++|+.|+ +|+++ |+||..... ..... +++..++..+|+.+ ++.++.
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~-~~~~~~~~~~~~l~~~f~~~-~~~~~~--------------------- 179 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNI-PTERGLLPGAGSVVTFVETA-TQTKPV--------------------- 179 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEE-EETTEEEECHHHHHHHHHHH-HTCCCE---------------------
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcc-cCCCCcccCCcHHHHHHHHH-hCCCcc---------------------
Confidence 458899999999997 89987 899953200 00011 11222234445432 222211
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~ 317 (323)
+..||+|++ |+.+++++|++|++|+||||+ .+|+.+|+++||.+
T Consensus 180 ---------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~ 224 (264)
T 1yv9_A 180 ---------------------YIGKPKAII--------------MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDS 224 (264)
T ss_dssp ---------------------ECSTTSHHH--------------HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEE
T ss_pred ---------------------ccCCCCHHH--------------HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcE
Confidence 124999999 999999999999999999999 59999999999999
Q ss_pred EEEcCC
Q 020675 318 VVMRSR 323 (323)
Q Consensus 318 v~v~~g 323 (323)
|+|.+|
T Consensus 225 i~v~~g 230 (264)
T 1yv9_A 225 LLVTSG 230 (264)
T ss_dssp EEETTS
T ss_pred EEECCC
Confidence 999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.71 E-value=9.1e-18 Score=154.33 Aligned_cols=86 Identities=9% Similarity=0.089 Sum_probs=74.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
.+++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|+.++
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~i~---------------------------- 210 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEVL---------------------------- 210 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSCC----------------------------
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhCCceeeeecC----------------------------
Confidence 57899999999999999999999999 66788999999999999887531
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
|. . ...+++++++. ++|++|||+.+|+.+|+++|+.+
T Consensus 211 ------------------------~~--~--------------K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v 247 (287)
T 3a1c_A 211 ------------------------PH--Q--------------KSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGI 247 (287)
T ss_dssp ------------------------TT--C--------------HHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEE
T ss_pred ------------------------hH--H--------------HHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeE
Confidence 10 1 34678899999 99999999999999999999973
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-18 Score=143.52 Aligned_cols=89 Identities=16% Similarity=0.087 Sum_probs=77.5
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHH
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 242 (323)
.|+..++|+.|+++|++++|+|| +....++.+++.+|+..+|+.
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~~~~--------------------------------- 81 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISG---RDSAPLITRLKELGVEEIYTG--------------------------------- 81 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEES---CCCHHHHHHHHHTTCCEEEEC---------------------------------
T ss_pred cccHHHHHHHHHHCCCEEEEEeC---CCcHHHHHHHHHcCCHhhccC---------------------------------
Confidence 45668999999999999999999 567889999999999887753
Q ss_pred HHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 243 ~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
.||+|++ |+.+++++|++|++++||||+.+|+.+|+++|+.+++.
T Consensus 82 -------------------~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~ 126 (162)
T 2p9j_A 82 -------------------SYKKLEI--------------YEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR 126 (162)
T ss_dssp -------------------C--CHHH--------------HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred -------------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec
Confidence 1888888 99999999999999999999999999999999987653
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.7e-18 Score=145.55 Aligned_cols=82 Identities=20% Similarity=0.132 Sum_probs=75.0
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
+|+.|+++|++++|+|| +....++.+++.+|+..+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~~~~~-------------------------------------- 77 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTG---EKTEIVRRRAEKLKVDYLFQGV-------------------------------------- 77 (164)
T ss_dssp HHHHHHHTTCCEEEECS---SCCHHHHHHHHHTTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeC---CChHHHHHHHHHcCCCEeeccc--------------------------------------
Confidence 78999999999999999 5678999999999999887741
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
||+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+.+++
T Consensus 78 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 120 (164)
T 3e8m_A 78 --------------VDKLSA--------------AEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP 120 (164)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC
T ss_pred --------------CChHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc
Confidence 888888 9999999999999999999999999999999998765
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.4e-17 Score=157.91 Aligned_cols=99 Identities=19% Similarity=0.228 Sum_probs=80.8
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCC------CC---hHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGK------SG---DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~------~~---~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
++||+.++|+.|+++|++++|+||.+. .. ...+..+++.+|+. |+.+ +++++..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i-~~~~~~~-------------- 150 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVL-VATHAGL-------------- 150 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEE-EECSSST--------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEE-EECCCCC--------------
Confidence 789999999999999999999999320 00 12377788999985 7764 4444332
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCCh----
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQ---- 304 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg----v~p~~~v~VGDs~---- 304 (323)
..||+|++ |+.+++++| ++|++|+||||+.
T Consensus 151 ----------------------------~~KP~p~~--------------~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~ 188 (416)
T 3zvl_A 151 ----------------------------NRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 188 (416)
T ss_dssp ----------------------------TSTTSSHH--------------HHHHHHHSSTTCCCCGGGCEEECSCSCBCT
T ss_pred ----------------------------CCCCCHHH--------------HHHHHHHhCCCCCCCHHHeEEEECCCCCcc
Confidence 24999999 999999998 9999999999997
Q ss_pred -------------hhHHHHHHcCCCEEE
Q 020675 305 -------------SGVAGAQRIGMPCVV 319 (323)
Q Consensus 305 -------------~Di~aA~~aG~~~v~ 319 (323)
.|+.+|+++|+.++.
T Consensus 189 ~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 189 NWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp TSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred cccccccccCCChhhHHHHHHcCCcccC
Confidence 899999999999864
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.9e-18 Score=152.66 Aligned_cols=82 Identities=9% Similarity=0.056 Sum_probs=73.5
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
+|+.|+++|++++|+|| .....++.+++.+|+..+|+..
T Consensus 84 ~L~~L~~~G~~l~I~T~---~~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 122 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITG---RRAKLLEDRANTLGITHLYQGQ-------------------------------------- 122 (211)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCchhhccc--------------------------------------
Confidence 89999999999999999 5678999999999999888742
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
||.|++ ++.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 123 --------------k~K~~~--------------l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~ 165 (211)
T 3ij5_A 123 --------------SDKLVA--------------YHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAV 165 (211)
T ss_dssp --------------SSHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEe
Confidence 555666 8999999999999999999999999999999998664
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.8e-18 Score=152.88 Aligned_cols=87 Identities=16% Similarity=0.227 Sum_probs=71.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++||+.++|+.|+++|++++|+|| .....+..+++.+|+..+|+.+ ++.+....
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~f~~~-~~~~k~~~--------------------- 198 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTG---DNRFVAKWVAEELGLDDYFAEV-LPHEKAEK--------------------- 198 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSC-CGGGHHHH---------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCChhHhHhc-CHHHHHHH---------------------
Confidence 6889999999999999999999999 6788899999999999999874 33332221
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
.||.|+. + +|++|||+.+|+.||++||+.+++
T Consensus 199 ---------------------~k~~~~~--------------~------------~~~~vGD~~nDi~~~~~Ag~~va~ 230 (280)
T 3skx_A 199 ---------------------VKEVQQK--------------Y------------VTAMVGDGVNDAPALAQADVGIAI 230 (280)
T ss_dssp ---------------------HHHHHTT--------------S------------CEEEEECTTTTHHHHHHSSEEEEC
T ss_pred ---------------------HHHHHhc--------------C------------CEEEEeCCchhHHHHHhCCceEEe
Confidence 2666666 3 789999999999999999975443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.4e-18 Score=146.34 Aligned_cols=81 Identities=11% Similarity=0.158 Sum_probs=71.7
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
+|+.|+++|++++|+|| +....++.+++.+|++ +|..
T Consensus 47 ~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~lgi~-~~~~--------------------------------------- 83 (176)
T 3mmz_A 47 GIAALRKSGLTMLILST---EQNPVVAARARKLKIP-VLHG--------------------------------------- 83 (176)
T ss_dssp HHHHHHHTTCEEEEEES---SCCHHHHHHHHHHTCC-EEES---------------------------------------
T ss_pred HHHHHHHCCCeEEEEEC---cChHHHHHHHHHcCCe-eEeC---------------------------------------
Confidence 89999999999999999 5678999999999998 5442
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
.||+|++ ++.+++++|+++++|++|||+.+|+.+++++|+.+++
T Consensus 84 -------------~~~k~~~--------------l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~ 127 (176)
T 3mmz_A 84 -------------IDRKDLA--------------LKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV 127 (176)
T ss_dssp -------------CSCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred -------------CCChHHH--------------HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC
Confidence 1677777 8999999999999999999999999999999987654
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5.2e-18 Score=146.87 Aligned_cols=82 Identities=11% Similarity=0.135 Sum_probs=71.8
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
+|+.|+++|++++|+|| .....++.+++.+|+..+|+..
T Consensus 54 ~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~lgl~~~f~~~-------------------------------------- 92 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISG---RKTAIVERRAKSLGIEHLFQGR-------------------------------------- 92 (189)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHHTCSEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEEC---cChHHHHHHHHHcCCHHHhcCc--------------------------------------
Confidence 89999999999999999 5678999999999999888752
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+|.|++ ++.+++++|++|++|++|||+.+|+.+|+++|+.+++
T Consensus 93 --------------~~K~~~--------------~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~ 135 (189)
T 3mn1_A 93 --------------EDKLVV--------------LDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAV 135 (189)
T ss_dssp --------------SCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEe
Confidence 222244 8999999999999999999999999999999998654
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.1e-17 Score=141.71 Aligned_cols=82 Identities=15% Similarity=0.119 Sum_probs=73.3
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
.|+.|+++|++++|+|| +....++.+++.+|+..+|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~---~~~~~~~~~l~~lgi~~~~~~~-------------------------------------- 98 (195)
T 3n07_A 60 GVKALMNAGIEIAIITG---RRSQIVENRMKALGISLIYQGQ-------------------------------------- 98 (195)
T ss_dssp HHHHHHHTTCEEEEECS---SCCHHHHHHHHHTTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCEEEEEEC---cCHHHHHHHHHHcCCcEEeeCC--------------------------------------
Confidence 48899999999999999 5678999999999999877631
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
||.|.+ ++.+++++|++|++|++|||+.+|+.+++++|+.+++
T Consensus 99 --------------k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~ 141 (195)
T 3n07_A 99 --------------DDKVQA--------------YYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV 141 (195)
T ss_dssp --------------SSHHHH--------------HHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC
T ss_pred --------------CCcHHH--------------HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE
Confidence 777777 8999999999999999999999999999999998664
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-16 Score=136.42 Aligned_cols=87 Identities=13% Similarity=-0.001 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHH
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEAR 244 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 244 (323)
...++|+.|+++|++++++|| .....+..+++.+|+..+|+.
T Consensus 39 ~~~~~l~~L~~~G~~~~i~Tg---~~~~~~~~~~~~lgl~~~~~~----------------------------------- 80 (180)
T 1k1e_A 39 RDGLGIKMLMDADIQVAVLSG---RDSPILRRRIADLGIKLFFLG----------------------------------- 80 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEEES---CCCHHHHHHHHHHTCCEEEES-----------------------------------
T ss_pred chHHHHHHHHHCCCeEEEEeC---CCcHHHHHHHHHcCCceeecC-----------------------------------
Confidence 445799999999999999999 567889999999999887653
Q ss_pred HHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 245 KAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 245 k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
.||+|.+ |+.+++++|++|++|++|||+.+|+.+|+++|+.+++.
T Consensus 81 -----------------~k~k~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~ 125 (180)
T 1k1e_A 81 -----------------KLEKETA--------------CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA 125 (180)
T ss_dssp -----------------CSCHHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT
T ss_pred -----------------CCCcHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC
Confidence 1777777 89999999999999999999999999999999997753
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-16 Score=138.45 Aligned_cols=82 Identities=13% Similarity=0.101 Sum_probs=74.2
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
.|+.|+++|++++|+|| +....++..++.+|+..+|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn---~~~~~~~~~l~~lgl~~~~~~~-------------------------------------- 92 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITT---AQNAVVDHRMEQLGITHYYKGQ-------------------------------------- 92 (191)
T ss_dssp HHHHHHHTTCEEEEECS---CCSHHHHHHHHHHTCCEEECSC--------------------------------------
T ss_pred HHHHHHHCCCeEEEEeC---cChHHHHHHHHHcCCccceeCC--------------------------------------
Confidence 48889999999999999 5678999999999999877742
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
||+|++ ++.+++++|++|++|+||||+.+|+.+|+++|+.+++
T Consensus 93 --------------kpk~~~--------------~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~ 135 (191)
T 3n1u_A 93 --------------VDKRSA--------------YQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV 135 (191)
T ss_dssp --------------SSCHHH--------------HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred --------------CChHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe
Confidence 888888 9999999999999999999999999999999998753
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-17 Score=149.37 Aligned_cols=48 Identities=10% Similarity=0.082 Sum_probs=45.3
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEEcCC
Q 020675 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~v~v~~g 323 (323)
.||+|.+ |+.+++++|++|++|++|||+ .+|+.+|+++|+.+|+|.+|
T Consensus 194 ~kpk~~~--------------~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g 242 (271)
T 1vjr_A 194 GKPNPLV--------------VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTG 242 (271)
T ss_dssp STTSTHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSS
T ss_pred CCCCHHH--------------HHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCC
Confidence 4999999 999999999999999999999 59999999999999999875
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.6e-17 Score=150.31 Aligned_cols=99 Identities=10% Similarity=0.210 Sum_probs=76.0
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHH--H--HHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--R--SVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~--~--~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
+...++++.|+++|++ +|+||.+ .... . .+++..++..+|+.+ +++++..
T Consensus 148 ~~~~~l~~~L~~~g~~-~i~tn~~---~~~~~~~~~~~~~~~~l~~~f~~~-~~~~~~~--------------------- 201 (284)
T 2hx1_A 148 HDLNKTVNLLRKRTIP-AIVANTD---NTYPLTKTDVAIAIGGVATMIESI-LGRRFIR--------------------- 201 (284)
T ss_dssp HHHHHHHHHHHHCCCC-EEEECCC---SEEECSSSCEEECHHHHHHHHHHH-HCSCEEE---------------------
T ss_pred ccHHHHHHHHhcCCCe-EEEECCC---ccccCcCCCccccCChHHHHHHHH-hCCceeE---------------------
Confidence 3777788899999999 9999953 2222 1 112445666677653 3333221
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc----CCCCCcEEEEcCCh-hhHHHHHHcC
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA----EKPVRNCFLIAGSQ-SGVAGAQRIG 314 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l----gv~p~~~v~VGDs~-~Di~aA~~aG 314 (323)
..||+|++ |+.+++++ |++|++|+||||+. +||.+|+++|
T Consensus 202 ---------------------~~KP~p~~--------------~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG 246 (284)
T 2hx1_A 202 ---------------------FGKPDSQM--------------FMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFG 246 (284)
T ss_dssp ---------------------ESTTSSHH--------------HHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred ---------------------ecCCCHHH--------------HHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcC
Confidence 24999999 99999999 99999999999995 9999999999
Q ss_pred CCEEEEcCC
Q 020675 315 MPCVVMRSR 323 (323)
Q Consensus 315 ~~~v~v~~g 323 (323)
|.+|+|.+|
T Consensus 247 ~~~i~v~~g 255 (284)
T 2hx1_A 247 LDTALVLTG 255 (284)
T ss_dssp CEEEEESSS
T ss_pred CeEEEECCC
Confidence 999999875
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.4e-16 Score=135.11 Aligned_cols=83 Identities=11% Similarity=0.095 Sum_probs=74.3
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
+|+.|+++|++++|+|| +....++.+++.+|+..+|+.
T Consensus 61 ~l~~L~~~g~~v~ivT~---~~~~~~~~~l~~lgl~~~~~~--------------------------------------- 98 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITG---RKAKLVEDRCATLGITHLYQG--------------------------------------- 98 (188)
T ss_dssp HHHHHHTTTCEEEEECS---SCCHHHHHHHHHHTCCEEECS---------------------------------------
T ss_pred HHHHHHHCCCeEEEEeC---CChHHHHHHHHHcCCceeecC---------------------------------------
Confidence 88999999999999999 567889999999999877653
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
.||+|++ |+.+++++|++|++|+||||+.+|+.+|+++|+.+++.
T Consensus 99 -------------~kpk~~~--------------~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~ 143 (188)
T 2r8e_A 99 -------------QSNKLIA--------------FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA 143 (188)
T ss_dssp -------------CSCSHHH--------------HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT
T ss_pred -------------CCCCHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec
Confidence 1888888 99999999999999999999999999999999987653
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-16 Score=143.12 Aligned_cols=49 Identities=22% Similarity=0.330 Sum_probs=45.9
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.+ |+.+++++|++|++|++|||+. +|+.+|+.+|+.+++|.+|
T Consensus 188 ~~kpk~~~--------------~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g 237 (271)
T 2x4d_A 188 VGKPSPEF--------------FKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTG 237 (271)
T ss_dssp ESTTCHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESST
T ss_pred ccCCCHHH--------------HHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCC
Confidence 35899998 9999999999999999999998 9999999999999999875
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4.4e-15 Score=134.23 Aligned_cols=50 Identities=8% Similarity=0.138 Sum_probs=46.7
Q ss_pred hhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEEcCC
Q 020675 260 SMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 260 ~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~v~v~~g 323 (323)
+..||+|.+ |+.+++++|++|+++++|||+ .+|+.+|+++|+++|+|.+|
T Consensus 179 ~~~Kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g 229 (264)
T 3epr_A 179 FIGKPNAII--------------MNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTG 229 (264)
T ss_dssp ECSTTSHHH--------------HHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS
T ss_pred cCCCCCHHH--------------HHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCC
Confidence 367899988 999999999999999999999 69999999999999999875
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=6e-15 Score=133.09 Aligned_cols=49 Identities=18% Similarity=0.230 Sum_probs=45.1
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.+ |+.+++++|++++++++|||+ .+|+.+|+++|+++++|.+|
T Consensus 185 ~~kp~~~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g 234 (268)
T 3qgm_A 185 VGKPSEVI--------------MREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTG 234 (268)
T ss_dssp CSTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSS
T ss_pred cCCCCHHH--------------HHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCC
Confidence 46777777 899999999999999999999 59999999999999999875
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.57 E-value=4.5e-15 Score=126.52 Aligned_cols=115 Identities=13% Similarity=0.042 Sum_probs=64.2
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh-HHHHHHHHHhcCCC
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-RKNALDEFLASKDA 160 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~ 160 (323)
|.+|+|||||||||+|+... +..++++ .+|.+. +.+.+ .+.... ........ ..+.+.........
T Consensus 2 Mm~~~viFD~DGtL~Ds~~~-~~~~~~~---~~g~~~---~~~~~---~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 68 (180)
T 3bwv_A 2 MTRQRIAIDMDEVLADTLGA-VVKAVNE---RADLNI---KMESL---NGKKLK---HMIPEHEGLVMDILKEPGFFRNL 68 (180)
T ss_dssp -CCCEEEEETBTTTBCHHHH-HHHHHHH---HSCCCC---CGGGC---TTCCC-----------CHHHHHHHSTTGGGSC
T ss_pred CcccEEEEeCCCcccccHHH-HHHHHHH---HhCCCC---CHHHH---cCccHH---HHCCchHHHHHHHHhCcchhccC
Confidence 34589999999999999985 7777776 567652 22221 111110 00000000 01111110011246
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCCh--HHHHHHHHH-cCCCccccce
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD--RIARSVVEK-LGSERISKIK 210 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~--~~~~~~l~~-lgl~~~fd~~ 210 (323)
+++||+.++|+.|++. ++++|+||+..... ......+.. ++...+|+.+
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i 120 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFV 120 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEE
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEE
Confidence 7999999999999985 99999999521021 223444554 5776666653
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.6e-16 Score=145.53 Aligned_cols=103 Identities=13% Similarity=0.059 Sum_probs=74.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHH--H-HHHHHcC-CCccccceeechhhhhhhhhcccccccccccCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--R-SVVEKLG-SERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~--~-~~l~~lg-l~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
..++|++.++++.|++.|+ ++++||... ... . ..+..+| +..+|+.. ++.++.
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~---~~~~~~~~~~~~~g~l~~~~~~~-~~~~~~------------------ 211 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDP---WHPLSDGSRTPGTGSLAAAVETA-SGRQAL------------------ 211 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCC---EEECTTSCEEECHHHHHHHHHHH-HTCCCE------------------
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCc---cccCCCCCcCCCCcHHHHHHHHH-hCCCce------------------
Confidence 3468999999999999999 999999532 111 0 1111122 23333321 111111
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIG 314 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG 314 (323)
+..||+|.+ |+.+++++|++|++|++|||+. +||.+|+++|
T Consensus 212 ------------------------~~~KP~~~~--------------~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG 253 (306)
T 2oyc_A 212 ------------------------VVGKPSPYM--------------FECITENFSIDPARTLMVGDRLETDILFGHRCG 253 (306)
T ss_dssp ------------------------ECSTTSTHH--------------HHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred ------------------------eeCCCCHHH--------------HHHHHHHcCCChHHEEEECCCchHHHHHHHHCC
Confidence 124999999 9999999999999999999996 9999999999
Q ss_pred CCEEEEcCC
Q 020675 315 MPCVVMRSR 323 (323)
Q Consensus 315 ~~~v~v~~g 323 (323)
+.+++|.+|
T Consensus 254 ~~~i~v~~g 262 (306)
T 2oyc_A 254 MTTVLTLTG 262 (306)
T ss_dssp CEEEEESSS
T ss_pred CeEEEECCC
Confidence 999999875
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.56 E-value=8.4e-16 Score=139.01 Aligned_cols=100 Identities=11% Similarity=0.084 Sum_probs=72.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHH--HHHHHH-cCCCccccceeechhhhhhhhhcccccccccccCcc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIA--RSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~--~~~l~~-lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
..++|++.++++.|+ +|+++ |+||.+. ... ...+.. .++..+|+.+ ++.++.
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~---~~~~~~~~l~~~~~l~~~~~~~-~~~~~~------------------- 183 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDA---TLPGEEGIYPGAGSIIAALKVA-TNVEPI------------------- 183 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCS---EEEETTEEEECHHHHHHHHHHH-HCCCCE-------------------
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCc---cccCCCCCcCCcHHHHHHHHHH-hCCCcc-------------------
Confidence 457899999999999 89998 9999532 111 111111 2333344432 222211
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGM 315 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~ 315 (323)
...||+|++ |+.++++ ++|++|+||||+. +||.+|+++||
T Consensus 184 -----------------------~~~KP~~~~--------------~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~ 224 (263)
T 1zjj_A 184 -----------------------IIGKPNEPM--------------YEVVREM--FPGEELWMVGDRLDTDIAFAKKFGM 224 (263)
T ss_dssp -----------------------ECSTTSHHH--------------HHHHHHH--STTCEEEEEESCTTTHHHHHHHTTC
T ss_pred -----------------------EecCCCHHH--------------HHHHHHh--CCcccEEEECCChHHHHHHHHHcCC
Confidence 124999999 9999998 9999999999995 99999999999
Q ss_pred CEEEEcCC
Q 020675 316 PCVVMRSR 323 (323)
Q Consensus 316 ~~v~v~~g 323 (323)
.+|+|.+|
T Consensus 225 ~~i~v~~g 232 (263)
T 1zjj_A 225 KAIMVLTG 232 (263)
T ss_dssp EEEEESSS
T ss_pred eEEEECCC
Confidence 99999875
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-14 Score=130.38 Aligned_cols=50 Identities=10% Similarity=0.179 Sum_probs=46.6
Q ss_pred hhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEEcCC
Q 020675 260 SMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 260 ~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~v~v~~g 323 (323)
...||+|.+ |+.+++++|++++++++|||+ .+|+.+|+.+|+.+++|.+|
T Consensus 180 ~~~kp~~~~--------------~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g 230 (266)
T 3pdw_A 180 FIGKPESII--------------MEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTG 230 (266)
T ss_dssp ECSTTSSHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC
T ss_pred ccCCCCHHH--------------HHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCC
Confidence 367899988 999999999999999999999 79999999999999999865
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.4e-15 Score=134.33 Aligned_cols=112 Identities=16% Similarity=0.023 Sum_probs=74.3
Q ss_pred CCChhHHHHHHHHHHC-CCcEEEEcCCCC------------------CChHHHHHHHHHcCCCccccceeechhhhhhhh
Q 020675 161 PLRPGVEDFVDDAYNE-GIPLIVLTAYGK------------------SGDRIARSVVEKLGSERISKIKIVGNEEVERSL 221 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~-Gi~l~ivTn~~~------------------~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~ 221 (323)
.+.+++.++++.++++ |+++++.|+... .....+..+++.+|+..+|... .. . ...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~-~-~~~ 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRC---NP-L-AGD 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEEC---CG-G-GTC
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEc---cc-c-ccC
Confidence 5789999999999998 999999997200 0235566677777877665431 00 0 000
Q ss_pred hcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEc
Q 020675 222 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 301 (323)
Q Consensus 222 ~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VG 301 (323)
......++.+. ..||.+.. ++.+++++|++|++|++||
T Consensus 197 ~~~~~~~~~~~----------------------------~~~~k~~~--------------~~~~~~~~~~~~~~~~~~G 234 (289)
T 3gyg_A 197 PEDSYDVDFIP----------------------------IGTGKNEI--------------VTFMLEKYNLNTERAIAFG 234 (289)
T ss_dssp CTTEEEEEEEE----------------------------SCCSHHHH--------------HHHHHHHHTCCGGGEEEEE
T ss_pred CCCceEEEEEe----------------------------CCCCHHHH--------------HHHHHHHcCCChhhEEEEc
Confidence 00000000000 11445555 8899999999999999999
Q ss_pred CChhhHHHHHHcCCCEEE
Q 020675 302 GSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 302 Ds~~Di~aA~~aG~~~v~ 319 (323)
|+.+|+.+++.+|+.+++
T Consensus 235 Ds~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 235 DSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp CSGGGHHHHTTSSEEEEC
T ss_pred CCHHHHHHHHhCCcEEEE
Confidence 999999999999976543
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=8.9e-16 Score=139.56 Aligned_cols=89 Identities=13% Similarity=0.208 Sum_probs=76.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
.+++||+.++|+.|+++|++++++|| .+...++.+++.+|++.+|+.++
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~~gl~~~f~~~~---------------------------- 183 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSG---DKEDKVKELSKELNIQEYYSNLS---------------------------- 183 (263)
Confidence 46899999999999999999999999 56788999999999998887531
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
|+. +..++++++.++++|+||||+.+|+.+|+++|+.+.+
T Consensus 184 --------------------------p~~--------------k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~ 223 (263)
T 2yj3_A 184 --------------------------PED--------------KVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAM 223 (263)
Confidence 111 4567889999999999999999999999999987544
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-14 Score=132.33 Aligned_cols=93 Identities=16% Similarity=0.314 Sum_probs=62.1
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCC
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAP 161 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 161 (323)
..+++||||+||||+|+... +...+.. +.. + .. .+.+++.....+
T Consensus 57 ~~~kavifDlDGTLld~~~~-~~~~~~~-----~~~---~-------------~~-------------~~~~~~~~~~~~ 101 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPH-QAMSVKT-----GKG---Y-------------PY-------------KWDDWINKAEAE 101 (258)
T ss_dssp SSEEEEEECSBTTTEECHHH-HHHHHHH-----SCC---T-------------TT-------------THHHHHHHCCCE
T ss_pred CCCCEEEEeCcccCcCCHHH-HHHHHhc-----ccc---h-------------HH-------------HHHHHHHcCCCC
Confidence 45789999999999998764 3222221 111 0 00 011111123467
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC--ccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKI 209 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~--~~fd~ 209 (323)
++||+.++|+.|+++|++++|+||........+...++.+|+. .+|+.
T Consensus 102 ~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~v 151 (258)
T 2i33_A 102 ALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHI 151 (258)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTE
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceE
Confidence 8999999999999999999999994211145677788899998 66664
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.50 E-value=3.1e-14 Score=131.11 Aligned_cols=103 Identities=14% Similarity=0.061 Sum_probs=82.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH--------cCCCccccceeechhhhhhhhhcccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK--------LGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~--------lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
+++||+.++|+.|+++|++++|+||........+...++. +|+ +|+.++. .++..
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~-~~~~~-------------- 250 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQ-REQGD-------------- 250 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEE-CCTTC--------------
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cchheee-ccCCC--------------
Confidence 3589999999999999999999999643222334566777 898 4776433 33221
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCc-EEEEcCChhhHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN-CFLIAGSQSGVAGAQ 311 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~-~v~VGDs~~Di~aA~ 311 (323)
.||+|++ +..++++++..+.+ |+||||+..|+++|+
T Consensus 251 -----------------------------~kp~p~~--------------~~~~~~~~~~~~~~~~~~vgD~~~di~~a~ 287 (301)
T 1ltq_A 251 -----------------------------TRKDDVV--------------KEEIFWKHIAPHFDVKLAIDDRTQVVEMWR 287 (301)
T ss_dssp -----------------------------CSCHHHH--------------HHHHHHHHTTTTCEEEEEEECCHHHHHHHH
T ss_pred -----------------------------CcHHHHH--------------HHHHHHHHhccccceEEEeCCcHHHHHHHH
Confidence 2899999 89999999888755 799999999999999
Q ss_pred HcCCCEEEEcCC
Q 020675 312 RIGMPCVVMRSR 323 (323)
Q Consensus 312 ~aG~~~v~v~~g 323 (323)
++||.+|+|.||
T Consensus 288 ~aG~~~~~v~~G 299 (301)
T 1ltq_A 288 RIGVECWQVASG 299 (301)
T ss_dssp HTTCCEEECSCC
T ss_pred HcCCeEEEecCC
Confidence 999999999987
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=8e-14 Score=118.65 Aligned_cols=79 Identities=10% Similarity=0.094 Sum_probs=63.7
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHH--HcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHH
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVE--KLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKA 246 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~--~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~ 246 (323)
.|+.|+++|++++|+|| . ..++.+++ .+|+. +|. +.
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg---~--~~~~~~l~~l~lgi~-~~~----g~-------------------------------- 81 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISE---R--ACSKQTLSALKLDCK-TEV----SV-------------------------------- 81 (168)
T ss_dssp HHHHHHHTTCEEEEECS---S--CCCHHHHHTTCCCCC-EEC----SC--------------------------------
T ss_pred HHHHHHHCCCEEEEEeC---c--HHHHHHHHHhCCCcE-EEE----CC--------------------------------
Confidence 58899999999999999 4 56677788 56665 332 11
Q ss_pred hhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 247 VSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 247 ~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
|+.|++ ++.+++++|++|++|+||||+.+|+.+++.+|+.+++
T Consensus 82 ----------------~~K~~~--------------l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~ 124 (168)
T 3ewi_A 82 ----------------SDKLAT--------------VDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP 124 (168)
T ss_dssp ----------------SCHHHH--------------HHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC
T ss_pred ----------------CChHHH--------------HHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe
Confidence 333444 8899999999999999999999999999999998653
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.39 E-value=2.6e-13 Score=120.42 Aligned_cols=39 Identities=8% Similarity=0.221 Sum_probs=35.3
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++|++++++++|||+.+|+.+++.+|+. +.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~ 196 (231)
T 1wr8_A 158 IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQ 196 (231)
T ss_dssp HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTT
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecC
Confidence 8899999999999999999999999999999998 44543
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.6e-13 Score=124.35 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=34.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 202 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 4dw8_A 202 LSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM 238 (279)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence 7889999999999999999999999999999976543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.4e-13 Score=122.88 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=34.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||++|++.||+.+++
T Consensus 207 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 243 (290)
T 3dnp_A 207 LALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM 243 (290)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe
Confidence 7889999999999999999999999999999987654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.34 E-value=9.3e-13 Score=118.19 Aligned_cols=37 Identities=8% Similarity=0.113 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|+++++|++|||+.||+.|++.+|+.+++
T Consensus 188 l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam 224 (258)
T 2pq0_A 188 IRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM 224 (258)
T ss_dssp HHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe
Confidence 7889999999999999999999999999999997764
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=4.1e-13 Score=121.64 Aligned_cols=36 Identities=6% Similarity=0.070 Sum_probs=31.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.+++++|++++++++|||+.||++|++.||+.++
T Consensus 202 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~va 237 (279)
T 3mpo_A 202 LSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVA 237 (279)
T ss_dssp HHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECB
T ss_pred HHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceee
Confidence 788999999999999999999999999999997654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2.8e-12 Score=115.46 Aligned_cols=37 Identities=0% Similarity=-0.019 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.+++.+|+.+++
T Consensus 192 ~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~ 228 (261)
T 2rbk_A 192 IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM 228 (261)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe
Confidence 7889999999999999999999999999999996543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.21 E-value=7.4e-12 Score=114.21 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=34.3
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 216 l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam 252 (283)
T 3dao_A 216 LSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV 252 (283)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc
Confidence 7889999999999999999999999999999977554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.1e-11 Score=112.23 Aligned_cols=54 Identities=11% Similarity=0.240 Sum_probs=44.4
Q ss_pred HhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCC-ChHHHHHHHHHcCCCcccc
Q 020675 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISK 208 (323)
Q Consensus 155 i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-~~~~~~~~l~~lgl~~~fd 208 (323)
+.....+++||+.++|+.|+++|++++|+||.+.. ....+...|+.+|+..+++
T Consensus 95 v~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (260)
T 3pct_A 95 VDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND 149 (260)
T ss_dssp HHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST
T ss_pred HHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc
Confidence 33456789999999999999999999999995422 3468888999999987664
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-11 Score=114.30 Aligned_cols=37 Identities=3% Similarity=-0.076 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||++|++.||+.+++
T Consensus 233 l~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam 269 (304)
T 3l7y_A 233 LQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM 269 (304)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC
T ss_pred HHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc
Confidence 6889999999999999999999999999999977553
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.8e-11 Score=110.99 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=42.8
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCC-ChHHHHHHHHHcCCCcccc
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISK 208 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-~~~~~~~~l~~lgl~~~fd 208 (323)
...+++||+.++|+.|+++|++++|+||.+.. ....+...|+.+|+..+++
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~ 149 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE 149 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc
Confidence 45779999999999999999999999995422 3468888999999987663
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.5e-10 Score=107.98 Aligned_cols=31 Identities=23% Similarity=0.533 Sum_probs=28.8
Q ss_pred CCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 293 PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 293 ~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
++++++||||+. +||.+|+++||.+|+|.+|
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G 320 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTG 320 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSSS
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEccC
Confidence 679999999998 5999999999999999875
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.12 E-value=4.2e-11 Score=107.65 Aligned_cols=37 Identities=8% Similarity=0.051 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.||+.+++
T Consensus 205 l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 241 (274)
T 3fzq_A 205 IKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM 241 (274)
T ss_dssp HHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE
T ss_pred HHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe
Confidence 7889999999999999999999999999999976654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-11 Score=111.94 Aligned_cols=36 Identities=8% Similarity=-0.041 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.+++++|++++++++|||+.||+.+++.+|+.++
T Consensus 196 ~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va 231 (271)
T 1rlm_A 196 ISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA 231 (271)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE
T ss_pred HHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE
Confidence 789999999999999999999999999999999654
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.06 E-value=6.5e-11 Score=107.91 Aligned_cols=37 Identities=16% Similarity=0.298 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 214 l~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm 250 (285)
T 3pgv_A 214 LEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM 250 (285)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc
Confidence 7889999999999999999999999999999977654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.5e-10 Score=108.18 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=32.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
..+.+++.++|+.|++ |++++++|+ .....+....+.+++
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~---~~~~~~~~~~~~~~~ 141 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVIST---SYTQYLRRTASMIGV 141 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEE---EEHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEEC---CceEEEcccchhhhh
Confidence 3579999999999999 999999998 444566666666666
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.02 E-value=4.5e-10 Score=102.53 Aligned_cols=39 Identities=18% Similarity=0.165 Sum_probs=35.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++|++++++++|||+.||+.|++.+|+ .|.+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~ 259 (288)
T 1nrw_A 221 LKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGN 259 (288)
T ss_dssp HHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTT
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcC
Confidence 788999999999999999999999999999999 555544
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.02 E-value=8.9e-10 Score=97.58 Aligned_cols=36 Identities=11% Similarity=-0.041 Sum_probs=33.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.+++++|++++++++|||+.||+.+++.+|+.++
T Consensus 158 l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va 193 (227)
T 1l6r_A 158 VNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC 193 (227)
T ss_dssp HHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE
T ss_pred HHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEE
Confidence 678899999999999999999999999999998643
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=97.54 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=34.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||++|++.+|+.+++
T Consensus 199 l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam 235 (268)
T 3r4c_A 199 LSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM 235 (268)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe
Confidence 7889999999999999999999999999999987654
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=9.3e-11 Score=102.01 Aligned_cols=97 Identities=13% Similarity=0.131 Sum_probs=81.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
+.++||+.++|+.|++. ++++|+|+ +....++.+++.+++..+|+.+ ++.++....
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Ts---s~~~~a~~vl~~ld~~~~f~~~-l~rd~~~~~------------------- 122 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTA---SLAKYADPVADLLDRWGVFRAR-LFRESCVFH------------------- 122 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCCSSCEEEE-ECGGGCEEE-------------------
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcC---CCHHHHHHHHHHhCCcccEEEE-EEcccceec-------------------
Confidence 56899999999999998 99999999 6789999999999999999875 555444221
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
| ++ |.++++++|.++++||+|||+..++.++.++||.++.
T Consensus 123 -----------------------k---~~--------------~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 123 -----------------------R---GN--------------YVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQS 162 (195)
T ss_dssp -----------------------T---TE--------------EECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCC
T ss_pred -----------------------C---Cc--------------eeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEee
Confidence 2 33 5677899999999999999999999999999997654
Q ss_pred E
Q 020675 320 M 320 (323)
Q Consensus 320 v 320 (323)
+
T Consensus 163 ~ 163 (195)
T 2hhl_A 163 W 163 (195)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.87 E-value=4.5e-09 Score=96.49 Aligned_cols=51 Identities=25% Similarity=0.488 Sum_probs=44.4
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
.+.+....++++||+.++++.|+++|++++++|+ +....++.+++.+|+..
T Consensus 132 ~~~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSg---g~~~~i~~i~~~~g~~~ 182 (297)
T 4fe3_A 132 KEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH 182 (297)
T ss_dssp HHHHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEE---EEHHHHHHHHHHTTCCC
T ss_pred HHHHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeC---CcHHHHHHHHHHcCCCc
Confidence 3444555688999999999999999999999999 78899999999999864
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.81 E-value=5.8e-10 Score=95.75 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=79.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.++|+.|++. ++++|+|+ +...+++.+++.+++..+|+.. ++.++....
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~---~~~~~a~~vl~~ld~~~~f~~~-~~rd~~~~~------------------- 109 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTA---SLAKYADPVADLLDKWGAFRAR-LFRESCVFH------------------- 109 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCTTCCEEEE-ECGGGSEEE-------------------
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcC---CCHHHHHHHHHHHCCCCcEEEE-EeccCceec-------------------
Confidence 56899999999999998 99999999 6789999999999999999875 444433210
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
| +. |.+.++.+|.++++||+|||+..++.++.++|+.+
T Consensus 110 -----------------------k---~~--------------~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 110 -----------------------R---GN--------------YVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp -----------------------T---TE--------------EECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred -----------------------C---Cc--------------EeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 1 22 55678899999999999999999999999999985
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.76 E-value=1.2e-07 Score=86.31 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=33.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
++.+++++|++++++++|||+.||+.+++.+|+. |.+.
T Consensus 203 l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~ 240 (282)
T 1rkq_A 203 VKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVG-VAVD 240 (282)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECT
T ss_pred HHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcE-EEec
Confidence 6888999999999999999999999999999984 4443
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=4.1e-09 Score=94.55 Aligned_cols=37 Identities=11% Similarity=0.051 Sum_probs=34.0
Q ss_pred HHHHHHHcCCCC--CcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPV--RNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p--~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|+++ +++++|||+.||+.|++.+|+.+++
T Consensus 181 l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 219 (259)
T 3zx4_A 181 VARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV 219 (259)
T ss_dssp HHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC
T ss_pred HHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe
Confidence 688899999999 9999999999999999999987543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-07 Score=85.16 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=33.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.+++++|++++++++|||+.||+.|++.+|+.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~ 230 (268)
T 1nf2_A 195 LRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA 230 (268)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEE
Confidence 788899999999999999999999999999999644
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.64 E-value=7e-07 Score=85.31 Aligned_cols=41 Identities=17% Similarity=0.151 Sum_probs=37.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.++||++++++.|+++|++++|||+ +....++.+.+.+|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSg---g~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSA---SFIDIVRAFATDTNNN 261 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHCTTSS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCcc
Confidence 3699999999999999999999999 7899999999999874
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=6e-08 Score=95.52 Aligned_cols=123 Identities=11% Similarity=0.121 Sum_probs=81.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc-C-------------CCccccceeechhhhhhhhhccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------------SERISKIKIVGNEEVERSLYGQF 225 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l-g-------------l~~~fd~~v~s~~~~~~~~~~~~ 225 (323)
+...|.+..+|+.|++.| ++.++|| +....+..+++.+ | +.++||.+|+.+. . ...|+.
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTN---S~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~-K-P~FF~~- 317 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATN---SDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDAR-K-PLFFGE- 317 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECS---SCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCC-T-TGGGTT-
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeC---CChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCC-C-CCcccC-
Confidence 456789999999999999 9999999 6788999999887 7 5578998655432 1 111110
Q ss_pred ccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCC--------CccccCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 020675 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL--------SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 297 (323)
Q Consensus 226 ~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP--------~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~ 297 (323)
+.. ..-.++.- +..++ ...+|.+ +- +..+++.+|+.++++
T Consensus 318 --~~p-fr~Vd~~t--------------------g~l~~~~~~~~l~~g~vY~g------Gn---~~~~~~llg~~g~eV 365 (555)
T 2jc9_A 318 --GTV-LRQVDTKT--------------------GKLKIGTYTGPLQHGIVYSG------GS---SDTICDLLGAKGKDI 365 (555)
T ss_dssp --CCC-EEEEETTT--------------------TEECSSCCCSCCCTTCCEEE------CC---HHHHHHHHTCCGGGE
T ss_pred --CCc-ceEeecCC--------------------CccccccccccccCCceecc------CC---HHHHHHHhCCCCCeE
Confidence 000 00000000 00000 0112100 00 378889999999999
Q ss_pred EEEcCCh-hhHHHHH-HcCCCEEEEc
Q 020675 298 FLIAGSQ-SGVAGAQ-RIGMPCVVMR 321 (323)
Q Consensus 298 v~VGDs~-~Di~aA~-~aG~~~v~v~ 321 (323)
+||||.. .||..++ .+||++++|.
T Consensus 366 LYVGDhIftDIl~~kk~~GWrTiLVi 391 (555)
T 2jc9_A 366 LYIGDHIFGDILKSKKRQGWRTFLVI 391 (555)
T ss_dssp EEEESCCCCCCHHHHHHHCCEEEEEC
T ss_pred EEECCEehHhHHhHHhhcCeEEEEEE
Confidence 9999996 7999997 9999999985
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.58 E-value=3.4e-07 Score=84.28 Aligned_cols=39 Identities=3% Similarity=0.039 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++.+|++++++++|||+.||+.+++.+|+. |.+.+
T Consensus 229 l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n 267 (301)
T 2b30_A 229 INYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVAN 267 (301)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTT
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcC
Confidence 6888999999999999999999999999999996 44443
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.30 E-value=7.8e-08 Score=91.37 Aligned_cols=52 Identities=17% Similarity=0.333 Sum_probs=44.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNE 215 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~ 215 (323)
+.++||+.++|+.+. +++.++|.|+ +...++..+++.++... +|...+++.+
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Ta---s~~~yA~~vl~~LDp~~~~f~~ri~sr~ 126 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTM---GTKAYAKEVAKIIDPTGKLFQDRVLSRD 126 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECS---SCHHHHHHHHHHHCTTSCSSSSCEECTT
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeC---CcHHHHHHHHHHhccCCceeeeEEEEec
Confidence 668999999999999 6799999999 67899999999999987 7875556543
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.14 E-value=4.6e-06 Score=84.80 Aligned_cols=87 Identities=10% Similarity=0.092 Sum_probs=68.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++|++.+.|+.|+++|++++++|+ .+...+..+.+.+|++.+|...
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~~~~------------------------------ 503 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIAEV------------------------------ 503 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEECSC------------------------------
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCEEEEeC------------------------------
Confidence 5889999999999999999999999 6788999999999998765431
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
.|. .+ ..+++.+.-. ++++||||+.||+.|.+.||+...+
T Consensus 504 ----------------------~P~---------~K-------~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam 543 (645)
T 3j08_A 504 ----------------------LPH---------QK-------SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV 543 (645)
T ss_dssp ----------------------CTT---------CH-------HHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEE
T ss_pred ----------------------CHH---------hH-------HHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEe
Confidence 111 11 1233444444 8899999999999999999976543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=8.7e-05 Score=69.19 Aligned_cols=38 Identities=18% Similarity=0.372 Sum_probs=34.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 201 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l 201 (323)
.++|+++++++.|+++|+.++|||. ++...++.+.+.+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSa---s~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISA---AHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHhhc
Confidence 4799999999999999999999999 6788898888764
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.6e-05 Score=81.84 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=40.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+++|++.+.|+.|+++|++++++|+ .+...+..+.+.+|++.++.
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TG---d~~~~a~~ia~~lgi~~~~~ 579 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIA 579 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEEC
T ss_pred CcchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCcEEEc
Confidence 5889999999999999999999999 67888999999999986554
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.81 E-value=4.9e-05 Score=73.86 Aligned_cols=125 Identities=8% Similarity=0.012 Sum_probs=80.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-c--------CCCccccceeechhhhhhhhhccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-l--------gl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
...|.+..+|+.|+++|-++.++|| +.-..+..+++. + ++.++||.+|+.+. ....|+.-..--.+
T Consensus 186 ~k~~~l~~~L~~lr~~GKklFLiTN---S~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~--KP~FF~~~~~~~~v 260 (470)
T 4g63_A 186 IREKEVVEGLKHFIRYGKKIFILTN---SEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLAN--KPRFFYDNLRFLSV 260 (470)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECS---SCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCC--TTHHHHSCCCEEEE
T ss_pred hCCHhHHHHHHHHHHcCCeEEEeeC---CCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCC--CCCcccCCCcceEE
Confidence 3568999999999999999999999 667888888876 3 47799998766542 12223211100000
Q ss_pred --ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCC-CccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhH
Q 020675 232 --SSGVDEQLATEARKAVSAQKQEIAEEVASMLKL-SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGV 307 (323)
Q Consensus 232 --~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP-~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di 307 (323)
..|.-. ...+| .+.+|.+.. .....+.+|..-.++++|||+. .||
T Consensus 261 ~~~~g~l~----------------------~~~~~~~~~vY~gGn---------~~~l~~llg~~g~~VLY~GDhi~~Di 309 (470)
T 4g63_A 261 NPENGTMT----------------------NVHGPIVPGVYQGGN---------AKKFTEDLGVGGDEILYIGDHIYGDI 309 (470)
T ss_dssp CTTTCCEE----------------------ECCSSCCSEEEEECC---------HHHHHHHTTCCGGGEEEEESCCCSCH
T ss_pred ECCCCccc----------------------ccccccCCceeecCc---------HHHHHHHhCCCCCeEEEECCchHHHH
Confidence 000000 00011 122332211 4566778899999999999996 698
Q ss_pred HHHHH-cCCCEEEEc
Q 020675 308 AGAQR-IGMPCVVMR 321 (323)
Q Consensus 308 ~aA~~-aG~~~v~v~ 321 (323)
..++. .||+|++|-
T Consensus 310 ~~~kk~~gWrT~~Ii 324 (470)
T 4g63_A 310 LRLKKDCNWRTALVV 324 (470)
T ss_dssp HHHHHSCCCEEEEEC
T ss_pred HhhhhccCCeEEEEh
Confidence 87775 699999884
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.80 E-value=4.4e-05 Score=81.26 Aligned_cols=116 Identities=13% Similarity=0.133 Sum_probs=73.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc---eeechhhhhhhhhcccccccccccCcc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI---KIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~---~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
-+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+....+. .++.+++...- .
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTG---D~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l---------------~ 663 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL---------------P 663 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTS---------------C
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhC---------------C
Confidence 36899999999999999999999999 678889999999999754321 12333222110 0
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccC-CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~-~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
+. +..++... ..++. -+|+.+..++ ..+++. .+.++|+||+.||+.|.++|++
T Consensus 664 ~~-----------~~~~~~~~--------~~v~~r~~P~~K~~~v----~~l~~~---g~~v~~~GDG~ND~~alk~Adv 717 (995)
T 3ar4_A 664 LA-----------EQREACRR--------ACCFARVEPSHKSKIV----EYLQSY---DEITAMTGDGVNDAPALKKAEI 717 (995)
T ss_dssp HH-----------HHHHHHHH--------CCEEESCCSSHHHHHH----HHHHTT---TCCEEEEECSGGGHHHHHHSTE
T ss_pred HH-----------HHHHHHhh--------CcEEEEeCHHHHHHHH----HHHHHC---CCEEEEEcCCchhHHHHHHCCe
Confidence 00 00011100 01111 0133343433 223333 4789999999999999999999
Q ss_pred CEEE
Q 020675 316 PCVV 319 (323)
Q Consensus 316 ~~v~ 319 (323)
...+
T Consensus 718 giam 721 (995)
T 3ar4_A 718 GIAM 721 (995)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.76 E-value=3.4e-05 Score=63.27 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=31.1
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
+.|++.++|+.|+++|+.++++|+.+......+...++.+|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 4568999999999999999999994210123455556677774
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.73 E-value=2.9e-05 Score=79.94 Aligned_cols=45 Identities=22% Similarity=0.482 Sum_probs=40.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
++.|++.+.|+.|+++|++++++|+ .+...+..+.+.+|++.++.
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTG---d~~~~a~~ia~~lgi~~v~a 598 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTG---DSKRTAEAVAGTLGIKKVVA 598 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECS---SCHHHHHHHHHHHTCCCEEC
T ss_pred cchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCEEEE
Confidence 5789999999999999999999999 67788999999999987554
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00028 Score=74.31 Aligned_cols=42 Identities=29% Similarity=0.330 Sum_probs=38.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
+++|++.+.++.|+++|+++.++|+ .+...+..+.+.+|+..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTG---D~~~TA~aIA~~lGI~~ 576 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTG---DAVGIARETSRQLGLGT 576 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHHHHHHTSSC
T ss_pred cccccHHHHHHHHhhcCceEEEEcC---CCHHHHHHHHHHcCCCc
Confidence 5899999999999999999999999 67888999999999963
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00053 Score=73.16 Aligned_cols=43 Identities=26% Similarity=0.390 Sum_probs=38.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+..
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lgi~~ 640 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGIIS 640 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTSSC
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECC---CCHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999 66788899999999863
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00016 Score=57.69 Aligned_cols=27 Identities=19% Similarity=0.174 Sum_probs=23.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYG 187 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~ 187 (323)
.+.|++.++|+.|+++|++++++|+..
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~ 50 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARN 50 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 466889999999999999999999953
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00042 Score=62.35 Aligned_cols=39 Identities=3% Similarity=-0.032 Sum_probs=34.4
Q ss_pred HHHHHHHcC-CCCCc--EEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAE-KPVRN--CFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lg-v~p~~--~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++| +++++ +++|||+.||+.+++.+|+. |.+.+
T Consensus 194 l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n 235 (275)
T 1xvi_A 194 ANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKG 235 (275)
T ss_dssp HHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCC
T ss_pred HHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecC
Confidence 688889999 99999 99999999999999999985 55544
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=97.30 E-value=2.8e-05 Score=67.68 Aligned_cols=93 Identities=11% Similarity=0.141 Sum_probs=69.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC-ccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~-~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
+..+||+.++|+.+. +++.++|.|+ +...++..+++.++.. .+|+..+ ..++...
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Ta---s~~~ya~~vl~~LDp~~~~f~~rl-~R~~c~~------------------- 113 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSS---NYMMYSDKIAEKLDPIHAFVSYNL-FKEHCVY------------------- 113 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECS---SCHHHHHHHHHHTSTTCSSEEEEE-CGGGSEE-------------------
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcC---CcHHHHHHHHHHhCCCCCeEEEEE-EecceeE-------------------
Confidence 458999999999998 6799999999 6789999999999987 4787643 3222211
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
.+.. |.+.++.+|.++++||+|+|+...+......|+.
T Consensus 114 --------------------------~~g~--------------y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~ 151 (204)
T 3qle_A 114 --------------------------KDGV--------------HIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIP 151 (204)
T ss_dssp --------------------------ETTE--------------EECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEE
T ss_pred --------------------------ECCe--------------eeecHHHhCCChHHEEEEECCHHHHhhCccCceE
Confidence 0011 3455678899999999999999877655555543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00046 Score=61.36 Aligned_cols=30 Identities=3% Similarity=-0.145 Sum_probs=25.3
Q ss_pred CCCcEEEEcCC----hhhHHHHHHcCCCEEEEcC
Q 020675 293 PVRNCFLIAGS----QSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 293 ~p~~~v~VGDs----~~Di~aA~~aG~~~v~v~~ 322 (323)
+++++++|||+ .||+.|.+.+|...+.|.+
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 78999999995 9999999988876666643
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.25 E-value=7.2e-05 Score=69.51 Aligned_cols=42 Identities=21% Similarity=0.431 Sum_probs=37.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f 207 (323)
.+||+.+||+.+.+ +|.++|.|+ +...++..+++.++....+
T Consensus 165 ~RP~l~eFL~~l~~-~yeivIfTa---s~~~ya~~vld~Ld~~~~~ 206 (320)
T 3shq_A 165 MRPYLHEFLTSAYE-DYDIVIWSA---TSMRWIEEKMRLLGVASND 206 (320)
T ss_dssp BCTTHHHHHHHHHH-HEEEEEECS---SCHHHHHHHHHHTTCTTCS
T ss_pred eCCCHHHHHHHHHh-CCEEEEEcC---CcHHHHHHHHHHhCCCCCc
Confidence 78999999999995 599999999 6789999999999887653
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0016 Score=69.62 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=37.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-+++|++.+.|+.|+++|++++++|+ .....+..+.+.+|+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTG---d~~~tA~~ia~~lgi~ 644 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTG---DHPITAKAIAASVGII 644 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCCC
Confidence 36899999999999999999999999 5678888899999985
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00044 Score=72.56 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=37.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
+++|++.+.++.|+++|+++.++|+ .+...+..+.+.+|+.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTG---D~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 528 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEES---SCHHHHTHHHHTTTCT
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcC---CChHHHHHHHHHhCCc
Confidence 5899999999999999999999999 6778888999999995
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00063 Score=60.09 Aligned_cols=35 Identities=3% Similarity=-0.118 Sum_probs=32.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
++.+++++|++++++++|||+.||+.+++.+|+.+
T Consensus 167 l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~v 201 (244)
T 1s2o_A 167 TQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGV 201 (244)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEE
T ss_pred HHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEE
Confidence 78889999999999999999999999999999853
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00069 Score=59.96 Aligned_cols=36 Identities=3% Similarity=0.056 Sum_probs=32.9
Q ss_pred HHHHHHHcCC-CCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv-~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.+++++|+ +++++++|||+.||+.|.+.+|+.++
T Consensus 184 l~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va 220 (249)
T 2zos_A 184 AKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFI 220 (249)
T ss_dssp HHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEE
T ss_pred HHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEE
Confidence 7888999998 99999999999999999999998643
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0029 Score=55.89 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=27.6
Q ss_pred HHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 168 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 168 elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
+.|+.|+++|++++++|+ .....+..+++.+++..
T Consensus 24 ~~l~~l~~~g~~~~i~Tg---r~~~~~~~~~~~~~~~~ 58 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSS---KTRAEQEYYRKELEVET 58 (249)
T ss_dssp HHHHHHHHTTEEEEEBCS---SCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCc
Confidence 456778889999999999 45677778888888764
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0021 Score=57.73 Aligned_cols=19 Identities=32% Similarity=0.515 Sum_probs=16.3
Q ss_pred CCCceEEEEecCCcccccc
Q 020675 81 PPRDLAVLLEVDGVLVDAY 99 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~ 99 (323)
.|.+|.|+||+||||++..
T Consensus 6 ~m~~~li~~DlDGTLl~~~ 24 (275)
T 1xvi_A 6 IQQPLLVFSDLDGTLLDSH 24 (275)
T ss_dssp CCCCEEEEEECTTTTSCSS
T ss_pred ccCceEEEEeCCCCCCCCC
Confidence 3678999999999999853
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.017 Score=51.56 Aligned_cols=49 Identities=20% Similarity=0.194 Sum_probs=38.4
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC-ccccce
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIK 210 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~-~~fd~~ 210 (323)
++|++.+.|+.|+++|++++++||............++.+|+. ..++.+
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~i 80 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKI 80 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGE
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhE
Confidence 4578888999999999999999984323456677788899998 666654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.0048 Score=54.16 Aligned_cols=33 Identities=0% Similarity=-0.072 Sum_probs=27.1
Q ss_pred cCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEEcC
Q 020675 290 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 290 lgv~p~~~v~VGD----s~~Di~aA~~aG~~~v~v~~ 322 (323)
+|++++++++||| +.||+.|.+.+|...+.|.+
T Consensus 197 ~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 197 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 8999999999999 99999999999876666543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=95.46 E-value=0.011 Score=51.72 Aligned_cols=33 Identities=12% Similarity=0.098 Sum_probs=28.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc--CCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI--GMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a--G~~~v~ 319 (323)
+++.+++++| +++|||+.||+.|.+.+ |..+++
T Consensus 164 al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam 198 (239)
T 1u02_A 164 AIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKV 198 (239)
T ss_dssp HHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEE
T ss_pred HHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEE
Confidence 3678888888 99999999999999999 887554
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.007 Score=58.35 Aligned_cols=52 Identities=17% Similarity=0.333 Sum_probs=44.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNE 215 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~ 215 (323)
+.++||+.+||+.+. ++|.++|.|. +...++..+++.++... +|...+++.+
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTa---s~~~YA~~Vl~~LDp~~~~f~~Rl~sRd 134 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTM---GTKAYAKEVAKIIDPTGKLFQDRVLSRD 134 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECS---SCHHHHHHHHHHHCTTSTTTTTCEECTT
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcC---CCHHHHHHHHHHhccCCccccceEEEec
Confidence 568999999999998 5699999999 67899999999999987 7877666543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.025 Score=50.17 Aligned_cols=33 Identities=3% Similarity=-0.105 Sum_probs=29.1
Q ss_pred cCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEEcC
Q 020675 290 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 290 lgv~p~~~v~VGD----s~~Di~aA~~aG~~~v~v~~ 322 (323)
+|++++++++||| +.||+.|.+.+|+..+.|.+
T Consensus 206 ~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N 242 (262)
T 2fue_A 206 DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 242 (262)
T ss_dssp TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC
Confidence 8999999999999 99999999999976666543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.92 E-value=0.21 Score=43.76 Aligned_cols=47 Identities=28% Similarity=0.440 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccce
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 210 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~ 210 (323)
|++.++|+.|+++|++++++||.+..........++.+|+....+.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i 66 (263)
T 1zjj_A 20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSII 66 (263)
T ss_dssp TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGE
T ss_pred ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhE
Confidence 56778888999999999999996432334444555567886545543
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=93.83 E-value=0.56 Score=41.54 Aligned_cols=40 Identities=13% Similarity=0.094 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
+|+.+.+++| +.-.-++|||+..--++|++.+|+++.|.+
T Consensus 219 CFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 219 CFERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp HHHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCCeEEeec
Confidence 3999999998 445678899999999999999999998764
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=93.60 E-value=0.054 Score=47.89 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=21.1
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHc
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~ 114 (323)
..+|.|+||+||||++.... ......++++++
T Consensus 11 ~~~kli~~DlDGTLl~~~~~-is~~~~~al~~l 42 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQK-IDPEVAAFLQKL 42 (262)
T ss_dssp --CEEEEEESBTTTBSTTSC-CCHHHHHHHHHH
T ss_pred cCeEEEEEeCccCCCCCCCc-CCHHHHHHHHHH
Confidence 35789999999999987652 334444555543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=93.18 E-value=0.056 Score=47.21 Aligned_cols=15 Identities=33% Similarity=0.481 Sum_probs=12.8
Q ss_pred ceEEEEecCCccccc
Q 020675 84 DLAVLLEVDGVLVDA 98 (323)
Q Consensus 84 ~kaViFD~DGTLid~ 98 (323)
+|+|+||+||||++.
T Consensus 1 ikli~~DlDGTLl~~ 15 (239)
T 1u02_A 1 MSLIFLDYDGTLVPI 15 (239)
T ss_dssp -CEEEEECBTTTBCC
T ss_pred CeEEEEecCCCCcCC
Confidence 478999999999984
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=91.38 E-value=0.63 Score=39.59 Aligned_cols=33 Identities=12% Similarity=0.162 Sum_probs=26.4
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 286 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 286 al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
-++.-|++ ++|||+.. ...|++.|++++++.+|
T Consensus 137 ~l~~~G~~----vvVG~~~~-~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 137 KVKTENIK----IVVSGKTV-TDEAIKQGLYGETINSG 169 (196)
T ss_dssp HHHHTTCC----EEEECHHH-HHHHHHTTCEEEECCCC
T ss_pred HHHHCCCe----EEECCHHH-HHHHHHcCCcEEEEecC
Confidence 34556765 69998766 77899999999999875
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=90.77 E-value=0.079 Score=46.17 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=22.6
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHc
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~ 114 (323)
.|++|+|+||+||||++.... ..+...++++++
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~-i~~~~~~al~~l 35 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQK-ITKEMDDFLQKL 35 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSC-CCHHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcc-cCHHHHHHHHHH
Confidence 567899999999999987642 334444555443
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=90.74 E-value=0.14 Score=44.79 Aligned_cols=27 Identities=11% Similarity=0.196 Sum_probs=18.4
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHH
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQK 113 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~ 113 (323)
..|+||+||||++... ......+++++
T Consensus 4 ~li~~DlDGTLl~~~~--~~~~~~~~l~~ 30 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQ--ALEHLQEYLGD 30 (244)
T ss_dssp EEEEECTBTTTBSCHH--HHHHHHHHHHT
T ss_pred eEEEEeCCCCCcCCHH--HHHHHHHHHHH
Confidence 4899999999998653 22444445543
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=87.57 E-value=2 Score=37.37 Aligned_cols=32 Identities=13% Similarity=0.108 Sum_probs=25.0
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 286 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 286 al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
-++.-|++ ++|||+.. ...|++.|++++++.+
T Consensus 149 ~l~~~G~~----vVVG~~~~-~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 149 ELKANGTE----AVVGAGLI-TDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHTTCC----EEEESHHH-HHHHHHTTSEEEESSC
T ss_pred HHHHCCCC----EEECCHHH-HHHHHHcCCcEEEECC
Confidence 34556765 69998766 7789999999999863
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=84.84 E-value=1.5 Score=39.11 Aligned_cols=43 Identities=12% Similarity=0.218 Sum_probs=34.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
+.|++.+.|+.|+++|++++++||.+..........++.+|+.
T Consensus 38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4567888999999999999999985433456666778888887
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=84.40 E-value=8.2 Score=33.13 Aligned_cols=43 Identities=14% Similarity=0.273 Sum_probs=32.6
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
.|++.++|+.|+++|++++++||.+..........++.+|++.
T Consensus 35 ~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 35 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 3566778889999999999999754334566667778888763
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=83.93 E-value=0.51 Score=44.53 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=23.2
Q ss_pred ceEEEEecCCccccccccchHH---HHHHHHHH---cCCCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQ---AFNVAFQK---LGLDC 118 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~---a~~~~~~~---~g~~~ 118 (323)
+|.|+||+|||+++.+.. +-- ...+++.. +|++.
T Consensus 1 ~~~~~fdvdgv~~~~~~~-~d~~~ltv~~~l~~~~~~~~~~ 40 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERC-FDVSALTVYELLMDKCYLGLHS 40 (384)
T ss_dssp CCEEEECSBTTTBCSHHH-HHHHHHHHHHHHHCTTTTCCSC
T ss_pred CceEEEecCceeechhhh-ccHHHHHHHHHHcCccccCCCc
Confidence 579999999999998764 322 23445554 56654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=81.87 E-value=0.31 Score=42.78 Aligned_cols=19 Identities=26% Similarity=0.447 Sum_probs=16.7
Q ss_pred CCceEEEEecCCccccccc
Q 020675 82 PRDLAVLLEVDGVLVDAYR 100 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~ 100 (323)
|.+|+|+||+||||++...
T Consensus 2 M~~kli~~DlDGTLl~~~~ 20 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRL 20 (246)
T ss_dssp CCSEEEEECSBTTTBSTTS
T ss_pred CCceEEEEeCcCCcCCCCC
Confidence 6789999999999998754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 323 | ||||
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 7e-05 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 3e-04 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 0.004 |
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 41.5 bits (97), Expect = 7e-05
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207
K L E +A D L+ G E+F GIP+ + +A + V+ + G S
Sbjct: 122 KAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH-S 177
Query: 208 KIKIVGNE 215
+K+V N
Sbjct: 178 NVKVVSNF 185
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 39.4 bits (90), Expect = 3e-04
Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF 145
AV+ G VD F + F F K G+ TA + D R L
Sbjct: 4 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVA---ITAEEARKPMGLLKIDHVRALTEMP 60
Query: 146 NRKNALDEFL 155
+ +
Sbjct: 61 RIASEWNRVF 70
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 35.9 bits (81), Expect = 0.004
Identities = 25/236 (10%), Positives = 58/236 (24%), Gaps = 18/236 (7%)
Query: 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLG-LDCANWTAPIYTDLLRKSAGDEDRMLVLF 144
+LL+++G F F + + +W + +
Sbjct: 9 VILLDIEGTTTPI-AFVKDILFPYIEENVKEYLQTHWEEEECQQDVS--LLRKQAEEDAH 65
Query: 145 FNRKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204
+ + + L+ ++ VD+ + TA + + R+ +
Sbjct: 66 LDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMK 125
Query: 205 RISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL 264
R + SSG E + E+ +
Sbjct: 126 AEF---FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD---- 178
Query: 265 SVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320
+ ES KI ++ N + + A+ + V+
Sbjct: 179 TKIGHKVESESYRKIADSIGCSTN-------NILFLTDVTREASAAEEADVHVAVV 227
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.95 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.95 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.95 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.95 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.95 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.94 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.93 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.93 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.92 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.9 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.9 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.9 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.9 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.89 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.89 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.86 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.86 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.81 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.79 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.77 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.77 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.73 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.72 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.71 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.69 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.68 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.66 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.64 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.63 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.63 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.36 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.06 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.05 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.96 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.91 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.88 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.84 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.79 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.73 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.47 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.37 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.3 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.3 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.26 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.23 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.15 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.01 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.84 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.81 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.75 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.46 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.1 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 96.89 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 96.79 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.55 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.02 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 92.49 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 90.88 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 90.02 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 88.28 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 86.51 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.5e-28 Score=213.62 Aligned_cols=173 Identities=17% Similarity=0.200 Sum_probs=130.5
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcc---------------cCCcHHHHHHHHHhH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRK---------------SAGDEDRMLVLFFNR 147 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 147 (323)
++||||||+||||+|+... +..+++++++++|++.. + ...+....+. ............
T Consensus 2 ~i~a~iFD~DGTL~dt~~~-~~~a~~~~~~~~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 75 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDIS-R-RNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERV--- 75 (218)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGG-G-GGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHH---
T ss_pred cceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCCC-H-HHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHH---
Confidence 5789999999999999886 88999999999998741 1 1111111110 000111111111
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
.+.+.+.+.. ..+++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+.+ ++++++..
T Consensus 76 ~~~~~~~~~~-~~~~~pg~~~~l~~L~~~g~~~~i~T~---~~~~~~~~~l~~~~l~~~F~~i-~~~~~~~~-------- 142 (218)
T d1te2a_ 76 IARAISLVEE-TRPLLPGVREAVALCKEQGLLVGLASA---SPLHMLEKVLTMFDLRDSFDAL-ASAEKLPY-------- 142 (218)
T ss_dssp HHHHHHHHHH-HCCBCTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEE-EECTTSSC--------
T ss_pred HHHHHHhhhc-cccccchHHHHHHHhhhcccccccccc---cccccccccccccccccccccc-cccccccc--------
Confidence 1222222222 356899999999999999999999999 6789999999999999999985 45544432
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
.||+|++ |+.+++++|++|++|+||||+.+|+
T Consensus 143 ----------------------------------~Kp~~~~--------------~~~~~~~l~~~~~~~l~igD~~~di 174 (218)
T d1te2a_ 143 ----------------------------------SKPHPQV--------------YLDCAAKLGVDPLTCVALEDSVNGM 174 (218)
T ss_dssp ----------------------------------CTTSTHH--------------HHHHHHHHTSCGGGEEEEESSHHHH
T ss_pred ----------------------------------chhhHHH--------------HHHHHHHcCCCchhcEEEeeCHHHH
Confidence 3999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcC
Q 020675 308 AGAQRIGMPCVVMRS 322 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~ 322 (323)
.+|+++||.+|+|..
T Consensus 175 ~aA~~~G~~~i~v~~ 189 (218)
T d1te2a_ 175 IASKAARMRSIVVPA 189 (218)
T ss_dssp HHHHHTTCEEEECCC
T ss_pred HHHHHcCCEEEEECC
Confidence 999999999999865
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.95 E-value=6.9e-29 Score=214.82 Aligned_cols=174 Identities=13% Similarity=0.138 Sum_probs=136.3
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHH-------hHHHHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFF-------NRKNALDEF 154 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 154 (323)
|++|+||||+||||+|+.+. +.++|+++++++|.+ +..+.+...++.. ..+...... .....+.+.
T Consensus 1 M~~k~viFD~DGTL~ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP---FSPAQAQKTFPMA---AEQAMTELGIAASEFDHFQAQYEDV 73 (207)
T ss_dssp CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC---CCHHHHHHHTTSC---HHHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCcCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcch---hhhhhhccccchhhHHHHHHHhhhh
Confidence 77899999999999999986 889999999999997 4555554444332 111111100 012233343
Q ss_pred HhcC--CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 155 LASK--DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 155 i~~~--~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
+... ..+++||+.++|+.|++ +++++|+|| +....+...++++|+..+|+.+ +++++...
T Consensus 74 ~~~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~~------------- 135 (207)
T d2hdoa1 74 MASHYDQIELYPGITSLFEQLPS-ELRLGIVTS---QRRNELESGMRSYPFMMRMAVT-ISADDTPK------------- 135 (207)
T ss_dssp HTTCGGGCEECTTHHHHHHHSCT-TSEEEEECS---SCHHHHHHHHTTSGGGGGEEEE-ECGGGSSC-------------
T ss_pred hcccccccccccchhhhhhhhcc-ccccccccc---cccccccccccccccccccccc-cccccccc-------------
Confidence 3322 46789999999999975 699999999 6789999999999999999975 55544422
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
.||+|++ |+.+++++|++|++|+||||+.+|+.+|++
T Consensus 136 -----------------------------~KP~p~~--------------~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~ 172 (207)
T d2hdoa1 136 -----------------------------RKPDPLP--------------LLTALEKVNVAPQNALFIGDSVSDEQTAQA 172 (207)
T ss_dssp -----------------------------CTTSSHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred -----------------------------chhhhhh--------------hcccccceeeeccceeEecCCHHHHHHHHH
Confidence 3999999 999999999999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+||.+|+|.+|
T Consensus 173 aG~~~i~v~~g 183 (207)
T d2hdoa1 173 ANVDFGLAVWG 183 (207)
T ss_dssp HTCEEEEEGGG
T ss_pred cCCeEEEEecC
Confidence 99999999864
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=7.9e-28 Score=207.43 Aligned_cols=172 Identities=19% Similarity=0.210 Sum_probs=129.5
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH--------HHHHHHHHh
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR--------KNALDEFLA 156 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~ 156 (323)
+|||||+||||+|+... +..+++++++++|++. +.+.....+... ............ ...+.+...
T Consensus 2 ~a~iFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIPY---DKEKVREFIFKY--SVQDLLVRVAEDRNLDVEVLNQVRAQSLA 75 (204)
T ss_dssp CEEEECTBTTTEECHHH-HHHHHHHHHHHHTCCC---CHHHHHHHHHHS--CHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCC---CHHHHHHhhccc--ccccccccccchhhhhHHHHHHHHHHHHH
Confidence 59999999999999885 8899999999999973 444333332211 122222111111 122222222
Q ss_pred --cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccC
Q 020675 157 --SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 157 --~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
.....++||+.++|+.|+++|++++|+||. .. .+..+++++|+.++|+.+ +++++...
T Consensus 76 ~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~---~~-~~~~~l~~~gl~~~f~~i-~~s~~~~~--------------- 135 (204)
T d2go7a1 76 EKNAQVVLMPGAREVLAWADESGIQQFIYTHK---GN-NAFTILKDLGVESYFTEI-LTSQSGFV--------------- 135 (204)
T ss_dssp TCGGGCEECTTHHHHHHHHHHTTCEEEEECSS---CT-HHHHHHHHHTCGGGEEEE-ECGGGCCC---------------
T ss_pred hhcccCcccchHHhhhhcccccccchhhhccc---ch-hhhhhhhhcccccccccc-cccccccc---------------
Confidence 224668999999999999999999999993 33 456789999999999975 55544432
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
.||+|++ |+.+++++|++|++|+||||+.+|+.+|+++|
T Consensus 136 ---------------------------~Kp~~~~--------------~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G 174 (204)
T d2go7a1 136 ---------------------------RKPSPEA--------------ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSG 174 (204)
T ss_dssp ---------------------------CTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHT
T ss_pred ---------------------------cchhHHH--------------HHHHHHHhCCCCceEEEEeCCHHHHHHHHHcC
Confidence 3999999 99999999999999999999999999999999
Q ss_pred CCEEEEcCC
Q 020675 315 MPCVVMRSR 323 (323)
Q Consensus 315 ~~~v~v~~g 323 (323)
|++|+|.++
T Consensus 175 ~~~i~v~~~ 183 (204)
T d2go7a1 175 IQSINFLES 183 (204)
T ss_dssp CEEEESSCC
T ss_pred CeEEEEcCC
Confidence 999998764
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.95 E-value=4.8e-28 Score=216.08 Aligned_cols=178 Identities=16% Similarity=0.087 Sum_probs=132.5
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH----------HHHH-----------
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE----------DRML----------- 141 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~----------- 141 (323)
++|+||||+||||+|+.......++.+++.++|++. +.+.+...++...... ...+
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAI---TAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEA 77 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCC---CHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCC---CHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHH
Confidence 478999999999999876545789999999999873 4443332222110000 0000
Q ss_pred --HHHHh-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhh
Q 020675 142 --VLFFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 218 (323)
Q Consensus 142 --~~~~~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~ 218 (323)
..... ..+.+.+.+ .....++||+.++|+.|+++|++++|+|| ++...++.+++.+|+..+|...+++++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn---~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~ 153 (257)
T d1swva_ 78 DIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTG---YTREMMDIVAKEAALQGYKPDFLVTPDDVP 153 (257)
T ss_dssp HHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCS---SCHHHHHHHHHHHHHTTCCCSCCBCGGGSS
T ss_pred HHHHHHHHHHHHHHHHh-hccCccCCcHHHHHHHHHhcccceeecCC---CchhhHHHHHHHHhhccccccccccccccc
Confidence 00010 122333332 23467999999999999999999999999 678999999999999998844456666553
Q ss_pred hhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcE
Q 020675 219 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNC 297 (323)
Q Consensus 219 ~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~ 297 (323)
. .||+|++ |..+++++|+. +++|
T Consensus 154 ~------------------------------------------~KP~p~~--------------~~~~~~~l~~~p~~~~ 177 (257)
T d1swva_ 154 A------------------------------------------GRPYPWM--------------CYKNAMELGVYPMNHM 177 (257)
T ss_dssp C------------------------------------------CTTSSHH--------------HHHHHHHHTCCSGGGE
T ss_pred c------------------------------------------cccChHH--------------HHHHHHHhCCCCcceE
Confidence 3 3999999 99999999996 5899
Q ss_pred EEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 298 FLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 298 v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
+||||+.+||.+|+++||.+|+|.+|
T Consensus 178 v~VgDs~~Di~aA~~aG~~ti~v~~G 203 (257)
T d1swva_ 178 IKVGDTVSDMKEGRNAGMWTVGVILG 203 (257)
T ss_dssp EEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred EEEeCChhhHHHHHHCCCEEEEEccC
Confidence 99999999999999999999999875
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.95 E-value=2.1e-27 Score=206.22 Aligned_cols=178 Identities=13% Similarity=0.114 Sum_probs=136.0
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHH-HHHHHHh---------------
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-MLVLFFN--------------- 146 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------- 146 (323)
.+|+|+||+||||+|+... +..+++++++++|.+. ...+.+....+........ .......
T Consensus 3 ~~k~iiFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (224)
T d2hsza1 3 QFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQ--ASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFK 79 (224)
T ss_dssp SCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCC--CCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred CCCEEEEeCCCCcccCHHH-HHHHHHHHHHHCCCCC--CcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHH
Confidence 4799999999999999885 8899999999999873 5556555554332111000 0000000
Q ss_pred -HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccc
Q 020675 147 -RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQF 225 (323)
Q Consensus 147 -~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~ 225 (323)
....+..........++||+.++|..|++.|++++|+|| +....++.+++.+|+..+|+.+ +++++..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn---~~~~~~~~~l~~~gl~~~f~~~-~~~~~~~------- 148 (224)
T d2hsza1 80 RQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTN---KPTKHVQPILTAFGIDHLFSEM-LGGQSLP------- 148 (224)
T ss_dssp HHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTCGGGCSEE-ECTTTSS-------
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHhccCCccccccc---ccHHHHHHHHHhcCchhhcccc-ccccccc-------
Confidence 011111112234567999999999999999999999999 6678899999999999999985 4444332
Q ss_pred ccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh
Q 020675 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (323)
Q Consensus 226 ~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~ 305 (323)
..||+|++ |..++++++++|++|+||||+.+
T Consensus 149 -----------------------------------~~kp~p~~--------------~~~~~~~~~~~~~~~~~igD~~~ 179 (224)
T d2hsza1 149 -----------------------------------EIKPHPAP--------------FYYLCGKFGLYPKQILFVGDSQN 179 (224)
T ss_dssp -----------------------------------SCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHH
T ss_pred -----------------------------------cccccchh--------------hHHHHHHhhhhhhccchhcCcHH
Confidence 23999999 99999999999999999999999
Q ss_pred hHHHHHHcCCCEEEEcCC
Q 020675 306 GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 306 Di~aA~~aG~~~v~v~~g 323 (323)
|+.+|+++||.+|+|.+|
T Consensus 180 Di~~A~~aG~~~i~v~~g 197 (224)
T d2hsza1 180 DIFAAHSAGCAVVGLTYG 197 (224)
T ss_dssp HHHHHHHHTCEEEEESSS
T ss_pred HHHHHHHcCCeEEEEeCC
Confidence 999999999999999864
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=2.6e-27 Score=202.34 Aligned_cols=171 Identities=16% Similarity=0.160 Sum_probs=130.4
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh----HHHHHHHHH--
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----RKNALDEFL-- 155 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i-- 155 (323)
|++|+||||+||||+|+... +..+|+++++++|++ ++.+.....++.... ........ ..+.+.+..
T Consensus 1 M~~k~viFD~DGTL~dt~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 73 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGIT---QDHDSVYQALKVSTP---FAIETFAPNLENFLEKYKENEAR 73 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHHHCHH---HHHHHHCTTCTTHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHcCCC---ccHHHHHhhhhccch---hhhhhhhHHHHHHHHHHHHHHHH
Confidence 78999999999999999885 889999999999997 456555555544321 11111110 122222211
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
......++||+.++|+.|+++|++++|+|| +..... ..++++++..+|+.+ ++++++..
T Consensus 74 ~~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn---~~~~~~-~~l~~~~l~~~fd~i-~~~~~~~~---------------- 132 (187)
T d2fi1a1 74 ELEHPILFEGVSDLLEDISNQGGRHFLVSH---RNDQVL-EILEKTSIAAYFTEV-VTSSSGFK---------------- 132 (187)
T ss_dssp HTTSCCBCTTHHHHHHHHHHTTCEEEEECS---SCTHHH-HHHHHTTCGGGEEEE-ECGGGCCC----------------
T ss_pred HhhcCcccchhHHHHHHHHhhhcccccccc---Cccchh-hhhhhhccccccccc-cccccccc----------------
Confidence 123467899999999999999999999999 444544 578999999999975 55555432
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
.||+|++ |+.+++++++ ++|+||||+..|+++|+++||
T Consensus 133 --------------------------~KP~p~~--------------~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 133 --------------------------RKPNPES--------------MLYLREKYQI--SSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp --------------------------CTTSCHH--------------HHHHHHHTTC--SSEEEEESSHHHHHHHHHTTC
T ss_pred --------------------------cCCCHHH--------------HHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCC
Confidence 3999999 9999999986 459999999999999999999
Q ss_pred CEEEEcC
Q 020675 316 PCVVMRS 322 (323)
Q Consensus 316 ~~v~v~~ 322 (323)
++|+|++
T Consensus 171 ~~i~v~~ 177 (187)
T d2fi1a1 171 DTHLFTS 177 (187)
T ss_dssp EEEECSC
T ss_pred EEEEECC
Confidence 9999875
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.94 E-value=1.7e-27 Score=207.31 Aligned_cols=174 Identities=17% Similarity=0.229 Sum_probs=128.9
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHccc------------CC--cHHHHHHHHHhHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS------------AG--DEDRMLVLFFNRKN 149 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~ 149 (323)
+|+|+||+||||+|+... +.+++++++.++|++. ...+....+.+.. .. .............+
T Consensus 2 ikaiiFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (221)
T d1o08a_ 2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING--VDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKND 78 (221)
T ss_dssp CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC--CCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCeEcCHHH-HHHHHHHHHHHcCCCC--ChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHh
Confidence 689999999999999886 8899999999999874 2233222221111 00 01111111111123
Q ss_pred HHHHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccc
Q 020675 150 ALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 150 ~~~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
.+.+.+.. ...+++||+.++|+.|++.|++++++||+ ......++.+|+..+|+.+ +++++..
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~-----~~~~~~l~~~~l~~~f~~i-~~~~~~~---------- 142 (221)
T d1o08a_ 79 NYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS-----KNGPFLLERMNLTGYFDAI-ADPAEVA---------- 142 (221)
T ss_dssp HHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSC-----TTHHHHHHHTTCGGGCSEE-CCTTTSS----------
T ss_pred hccccccccccccccCCceeccccccccccceEEEeec-----chhhHHHHhhccccccccc-ccccccc----------
Confidence 33333322 24568999999999999999999999993 2357889999999999985 4444432
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
..||+|++ |+.+++++|++|++|+||||+.+|++
T Consensus 143 --------------------------------~~KP~~~~--------------~~~~l~~~~i~~~~~l~VgD~~~di~ 176 (221)
T d1o08a_ 143 --------------------------------ASKPAPDI--------------FIAAAHAVGVAPSESIGLEDSQAGIQ 176 (221)
T ss_dssp --------------------------------SCTTSTHH--------------HHHHHHHTTCCGGGEEEEESSHHHHH
T ss_pred --------------------------------ccccChHH--------------HHHHHHHcCCCCceEEEEecCHHHHH
Confidence 24999999 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcC
Q 020675 309 GAQRIGMPCVVMRS 322 (323)
Q Consensus 309 aA~~aG~~~v~v~~ 322 (323)
+|+++||++|+|.+
T Consensus 177 ~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 177 AIKDSGALPIGVGR 190 (221)
T ss_dssp HHHHHTCEEEEESC
T ss_pred HHHHcCCEEEEECC
Confidence 99999999999975
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.93 E-value=1.9e-26 Score=200.81 Aligned_cols=175 Identities=17% Similarity=0.172 Sum_probs=130.8
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHH-HHHHcccCCcHHHHHHHHH---------hH-HHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIY-TDLLRKSAGDEDRMLVLFF---------NR-KNALD 152 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~-~~~~~ 152 (323)
+|+||||+||||+|++.. +..+++++++++|++ ++.+.+ ..+.+.............. .. ...+.
T Consensus 2 ~kaviFD~DGtL~dt~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYP---ISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKLLD 77 (222)
T ss_dssp CSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCC---CCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHHHHH
T ss_pred ceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCC---CCHHHHHHHHhhhccccccccccccccccccccchhHHHHHHH
Confidence 689999999999999886 889999999999997 344433 3333332111111110000 00 22222
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 153 ~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
+... ....++||+.++|+.|+ .+.+++|| +....+...++++|+..+|+..+++.++...
T Consensus 78 ~~~~-~~~~~~~g~~~~L~~l~---~~~~i~t~---~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------------- 137 (222)
T d2fdra1 78 MRLE-RDVKIIDGVKFALSRLT---TPRCICSN---SSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA------------- 137 (222)
T ss_dssp HHHH-HHCCBCTTHHHHHHHCC---SCEEEEES---SCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT-------------
T ss_pred HHhh-hccchhhhHHHHhhhcc---ccceeeee---cchhhhhhhhcccccccccceeecccccccc-------------
Confidence 3222 23678999999999886 45689999 5678899999999999999987666654322
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
...||+|++ |..+++++|++|++|+||||+..|+.+|++
T Consensus 138 ---------------------------~~~KP~~~~--------------~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~ 176 (222)
T d2fdra1 138 ---------------------------DRVKPKPDI--------------FLHGAAQFGVSPDRVVVVEDSVHGIHGARA 176 (222)
T ss_dssp ---------------------------TCCTTSSHH--------------HHHHHHHHTCCGGGEEEEESSHHHHHHHHH
T ss_pred ---------------------------cccccCHHH--------------HHHHHHhhCCCCceEEEEcCCHHHHHHHHH
Confidence 124999999 999999999999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+||.+|+|.++
T Consensus 177 aG~~~i~v~~~ 187 (222)
T d2fdra1 177 AGMRVIGFTGA 187 (222)
T ss_dssp TTCEEEEECCS
T ss_pred cCCEEEEEccC
Confidence 99999999864
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.93 E-value=2.7e-26 Score=198.13 Aligned_cols=171 Identities=16% Similarity=0.235 Sum_probs=130.5
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHH---------HHhH-HHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL---------FFNR-KNALD 152 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~ 152 (323)
++|+|+||+||||+|+... +..+++++++++|++. .+.+.+..+.+.. ....... .... ...+.
T Consensus 3 ~ik~VifD~DGTL~ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (210)
T d2ah5a1 3 SITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPS--PDAKTIRGFMGPP---LESSFATCLSKDQISEAVQIYRSYYK 76 (210)
T ss_dssp TCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCC--CCHHHHHHTSSSC---HHHHHHTTSCGGGHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHhhhcc---hhhhccccccchhhHHHHHHHHHHHH
Confidence 4899999999999999885 8899999999999873 4455554443322 1111111 1100 11122
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 153 ~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
.. ......++||+.++|+.|+.+ ++++|+|| ++...++.+++.+|++.+|+.++ ++++.
T Consensus 77 ~~-~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~gl~~~fd~v~-~~~~~--------------- 135 (210)
T d2ah5a1 77 AK-GIYEAQLFPQIIDLLEELSSS-YPLYITTT---KDTSTAQDMAKNLEIHHFFDGIY-GSSPE--------------- 135 (210)
T ss_dssp HT-GGGSCEECTTHHHHHHHHHTT-SCEEEEEE---EEHHHHHHHHHHTTCGGGCSEEE-EECSS---------------
T ss_pred hh-hhhcccchhHHHHHHhhhhcc-cchhhccc---ccchhhhHHHHhhcccccccccc-ccccc---------------
Confidence 21 123467899999999999876 59999999 67899999999999999999754 33221
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
.||+|++ |+.+++++|++|++++||||+.+|+.+|++
T Consensus 136 -----------------------------~~~~p~~--------------~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~ 172 (210)
T d2ah5a1 136 -----------------------------APHKADV--------------IHQALQTHQLAPEQAIIIGDTKFDMLGARE 172 (210)
T ss_dssp -----------------------------CCSHHHH--------------HHHHHHHTTCCGGGEEEEESSHHHHHHHHH
T ss_pred -----------------------------ccccccc--------------cchhhhhhhcccccceeecCCHHHHHHHHH
Confidence 2778888 899999999999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+||++|+|.+|
T Consensus 173 aGi~~i~v~~g 183 (210)
T d2ah5a1 173 TGIQKLAITWG 183 (210)
T ss_dssp HTCEEEEESSS
T ss_pred cCCeEEEEcCC
Confidence 99999999875
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.92 E-value=3.2e-25 Score=194.07 Aligned_cols=179 Identities=15% Similarity=0.202 Sum_probs=124.6
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHc-CCCCC----CCC----HHHHHHHHcccCCcHHHHHHHHHhH----HHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-GLDCA----NWT----APIYTDLLRKSAGDEDRMLVLFFNR----KNA 150 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~-g~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 150 (323)
.|.||||+||||+|+... +..++.+++.++ |.... .+. .......+................. ...
T Consensus 2 ~klviFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL 80 (228)
T ss_dssp CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHH-HHHHHHHHHHHHcCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence 579999999999999986 888998887774 44321 011 1222233322222222111111111 222
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCC-CcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~G-i~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
+.+.......+++||+.++|+.|+++| ++++|+|| +....+...++.+|+.++|+.+ +++++...
T Consensus 81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~---~~~~~~~~~l~~~gl~~~fd~i-~~~~~~~~---------- 146 (228)
T d2hcfa1 81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTG---NFEASGRHKLKLPGIDHYFPFG-AFADDALD---------- 146 (228)
T ss_dssp HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECS---SCHHHHHHHHHTTTCSTTCSCE-ECTTTCSS----------
T ss_pred HHHHhhccCceecCchHHHHhhhhccccccccccCC---Ccchhhhhhhhhhccccccccc-cccccccc----------
Confidence 333333344678999999999999987 89999999 6788899999999999999985 44444322
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc---CCCCCcEEEEcCChhh
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA---EKPVRNCFLIAGSQSG 306 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l---gv~p~~~v~VGDs~~D 306 (323)
.||.|++ +...+..+ +++|++|+||||+.+|
T Consensus 147 --------------------------------~k~~p~~--------------~~~~~~~~~~~~~~p~~~l~VGD~~~D 180 (228)
T d2hcfa1 147 --------------------------------RNELPHI--------------ALERARRMTGANYSPSQIVIIGDTEHD 180 (228)
T ss_dssp --------------------------------GGGHHHH--------------HHHHHHHHHCCCCCGGGEEEEESSHHH
T ss_pred --------------------------------ccchhHH--------------HHHHhhhhcccCCChhHheeecCChHH
Confidence 2777776 44444443 7999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 020675 307 VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~g 323 (323)
+.+|+++||++|+|.+|
T Consensus 181 i~aA~~aG~~~i~v~~g 197 (228)
T d2hcfa1 181 IRCARELDARSIAVATG 197 (228)
T ss_dssp HHHHHTTTCEEEEECCS
T ss_pred HHHHHHcCCEEEEEcCC
Confidence 99999999999999875
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=6.1e-24 Score=185.84 Aligned_cols=105 Identities=10% Similarity=0.056 Sum_probs=92.0
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
...++||+.++|+.|+++|++++|+|| +........++.+|+.++|+....+.++..
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-------------------- 181 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSS---GSVEAQKLLFGHSTEGDILELVDGHFDTKI-------------------- 181 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHTBTTBCCGGGCSEEECGGG--------------------
T ss_pred ccccCCCHHHHHHHHhhccCceeecCC---CcHHHHHHHHHHcCcchhhhhcceeecccc--------------------
Confidence 456899999999999999999999999 667888899999999999886544433322
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|.+ |+.+++++|++|++|+||||+.+||.+|+++||++|
T Consensus 182 ----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti 225 (253)
T d1zs9a1 182 ----------------------GHKVESES--------------YRKIADSIGCSTNNILFLTDVTREASAAEEADVHVA 225 (253)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ----------------------ccCCCcHH--------------HHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEE
Confidence 23999999 999999999999999999999999999999999999
Q ss_pred EEcC
Q 020675 319 VMRS 322 (323)
Q Consensus 319 ~v~~ 322 (323)
+|..
T Consensus 226 ~v~r 229 (253)
T d1zs9a1 226 VVVR 229 (253)
T ss_dssp EECC
T ss_pred EEeC
Confidence 9853
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.90 E-value=4.8e-24 Score=184.71 Aligned_cols=104 Identities=14% Similarity=0.171 Sum_probs=92.9
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
...++|++.++++.+++.|++++++|| +.....+..++.+++..+|+.++.+ ++..
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn---~~~~~~~~~~~~~~~~~~fd~~~~s-~~~~-------------------- 146 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSN---GSPQSIDAVVSHAGLRDGFDHLLSV-DPVQ-------------------- 146 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEES---SCHHHHHHHHHHTTCGGGCSEEEES-GGGT--------------------
T ss_pred cccccchhHHHHHHHHhcCCeEEeecc---hHHHHHHHHHhhccccccccceeee-eeee--------------------
Confidence 466899999999999999999999999 6678899999999999999986544 3332
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|+||||+..||.+|+++||++|
T Consensus 147 ----------------------~~KP~p~~--------------~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v 190 (220)
T d1zrna_ 147 ----------------------VYKPDNRV--------------YELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 190 (220)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred ----------------------ccccHHHH--------------HHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEE
Confidence 23999999 999999999999999999999999999999999999
Q ss_pred EEcC
Q 020675 319 VMRS 322 (323)
Q Consensus 319 ~v~~ 322 (323)
+|.+
T Consensus 191 ~v~r 194 (220)
T d1zrna_ 191 WINR 194 (220)
T ss_dssp EECT
T ss_pred EEcC
Confidence 9963
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.90 E-value=7.5e-24 Score=185.69 Aligned_cols=102 Identities=15% Similarity=0.222 Sum_probs=90.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.++|+.|+ +|++++++|| +.....+..++.+|+.++|+.+ +++++..
T Consensus 99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn---~~~~~~~~~l~~~gl~~~fd~i-~~s~~~~--------------------- 152 (230)
T d1x42a1 99 GELYPEVVEVLKSLK-GKYHVGMITD---SDTEYLMAHLDALGIKDLFDSI-TTSEEAG--------------------- 152 (230)
T ss_dssp CCBCTTHHHHHHHHB-TTBEEEEEES---SCHHHHHHHHHHHTCGGGCSEE-EEHHHHT---------------------
T ss_pred CcccccHHHHHHHhh-ccCceeeeec---cccccchhhhcccccccccccc-ccccccc---------------------
Confidence 568999999999997 5799999999 6788899999999999999985 4444442
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 318 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|+||||+. +||.+|+++||.+|
T Consensus 153 ---------------------~~KP~~~~--------------~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v 197 (230)
T d1x42a1 153 ---------------------FFKPHPRI--------------FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSI 197 (230)
T ss_dssp ---------------------BCTTSHHH--------------HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEE
T ss_pred ---------------------ccchhhHH--------------HHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEE
Confidence 24999999 9999999999999999999985 79999999999999
Q ss_pred EEcC
Q 020675 319 VMRS 322 (323)
Q Consensus 319 ~v~~ 322 (323)
++.+
T Consensus 198 ~v~~ 201 (230)
T d1x42a1 198 LLDR 201 (230)
T ss_dssp EECT
T ss_pred EECC
Confidence 9864
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=1.8e-23 Score=184.65 Aligned_cols=176 Identities=14% Similarity=0.192 Sum_probs=121.0
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCH--HHHHH-----HHccc----CCcHHHHHHHHHh----
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA--PIYTD-----LLRKS----AGDEDRMLVLFFN---- 146 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~--~~~~~-----~~~~~----~~~~~~~~~~~~~---- 146 (323)
.++|+|+||+||||+|+... ...++.++++.++... .+.. ..+.. +.... ...........+.
T Consensus 4 ~~IKaviFD~dGTL~d~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (247)
T d2gfha1 4 SRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKY-HYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQ 81 (247)
T ss_dssp CCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTT-CCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHH
T ss_pred CCCcEEEEcCCCCcCcChHH-HHHHHHHHHHHhcccc-CcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence 46899999999999998875 6777777777654332 1111 11111 11100 0001111111100
Q ss_pred H--------------HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceee
Q 020675 147 R--------------KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 212 (323)
Q Consensus 147 ~--------------~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~ 212 (323)
. ...+... ......++||+.++|+.|+ +|++++|+|| +.....+..++.+|+..+|+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~L~-~~~~l~i~Tn---~~~~~~~~~l~~~gl~~~fd~i~- 155 (247)
T d2gfha1 82 ETKGGADNRKLAEECYFLWKST-RLQHMILADDVKAMLTELR-KEVRLLLLTN---GDRQTQREKIEACACQSYFDAIV- 155 (247)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHHHH-TTSEEEEEEC---SCHHHHHHHHHHHTCGGGCSEEE-
T ss_pred HhccccchHHHHHHHHHHHHHh-hhccCccCccHHHHHHHhh-cccceEEeec---ccchhhhhhhhhccccccccccc-
Confidence 0 1111111 1234679999999999998 5899999999 66788899999999999999864
Q ss_pred chhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCC
Q 020675 213 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 292 (323)
Q Consensus 213 s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv 292 (323)
++++.. ..||+|++ |+.+++++|+
T Consensus 156 ~s~~~~------------------------------------------~~KP~p~~--------------~~~~~~~~~~ 179 (247)
T d2gfha1 156 IGGEQK------------------------------------------EEKPAPSI--------------FYHCCDLLGV 179 (247)
T ss_dssp EGGGSS------------------------------------------SCTTCHHH--------------HHHHHHHHTC
T ss_pred cccccc------------------------------------------cchhhhhh--------------HHHHHHHhhc
Confidence 444432 23999999 9999999999
Q ss_pred CCCcEEEEcCCh-hhHHHHHHcCCCEEEEc
Q 020675 293 PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 293 ~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~ 321 (323)
+|++|+||||+. +|+.+|+++||+++++.
T Consensus 180 ~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~ 209 (247)
T d2gfha1 180 QPGDCVMVGDTLETDIQGGLNAGLKATVWI 209 (247)
T ss_dssp CGGGEEEEESCTTTHHHHHHHTTCSEEEEE
T ss_pred CHHhcceeccChHhHHHHHHHcCCeEEEEE
Confidence 999999999996 79999999999976543
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=8.9e-24 Score=181.88 Aligned_cols=106 Identities=9% Similarity=0.032 Sum_probs=88.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC-ChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++||+.++|..|+++|++++++||.... ............++.++|+.+ +++++..
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i-~~s~~~~-------------------- 156 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFL-IESCQVG-------------------- 156 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEE-EEHHHHT--------------------
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEE-Eeccccc--------------------
Confidence 568999999999999999999999995422 223445556667888999985 4444432
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++.+|++|++|+||||+..|+.+|+++||++|
T Consensus 157 ----------------------~~KP~~~~--------------~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti 200 (225)
T d1zd3a1 157 ----------------------MVKPEPQI--------------YKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTI 200 (225)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred ----------------------cchhHHHH--------------HHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEE
Confidence 34999999 999999999999999999999999999999999999
Q ss_pred EEcC
Q 020675 319 VMRS 322 (323)
Q Consensus 319 ~v~~ 322 (323)
+|.+
T Consensus 201 ~v~~ 204 (225)
T d1zd3a1 201 LVQD 204 (225)
T ss_dssp ECSS
T ss_pred EECC
Confidence 9975
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=5.6e-24 Score=184.30 Aligned_cols=107 Identities=11% Similarity=0.086 Sum_probs=91.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCC-CChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGK-SGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~-~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++|++.++|+.|+++|++++++||... .........+..+|+.++||.+ ++++++.
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i-~~s~~~~-------------------- 154 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFL-IESCQVG-------------------- 154 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEE-EEHHHHS--------------------
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhcee-eehhhcc--------------------
Confidence 56899999999999999999999998432 2344566677888999999985 4554442
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|+||||+..||.+|+++||++|
T Consensus 155 ----------------------~~KP~p~~--------------~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti 198 (222)
T d1cr6a1 155 ----------------------MIKPEPQI--------------YNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTI 198 (222)
T ss_dssp ----------------------CCTTCHHH--------------HHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEE
T ss_pred ----------------------CCCCChHH--------------HHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEE
Confidence 24999999 999999999999999999999999999999999999
Q ss_pred EEcCC
Q 020675 319 VMRSR 323 (323)
Q Consensus 319 ~v~~g 323 (323)
+|.++
T Consensus 199 ~V~~~ 203 (222)
T d1cr6a1 199 LVHNT 203 (222)
T ss_dssp ECCSS
T ss_pred EECCc
Confidence 99764
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.89 E-value=3e-23 Score=182.33 Aligned_cols=101 Identities=11% Similarity=0.150 Sum_probs=89.4
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
...++|++.++|+.|+ ++.++++|| +....+...++.+++..+|+.+ ++++++.
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~---~~~~~~~~~~~~~~~~~~fd~v-~~s~~~~-------------------- 144 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSN---GAPDMLQALVANAGLTDSFDAV-ISVDAKR-------------------- 144 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEES---SCHHHHHHHHHHTTCGGGCSEE-EEGGGGT--------------------
T ss_pred ccccchhhhHHHHHHh--hhceeEEec---cchHHHHHHHhhcccccccccc-ccccccc--------------------
Confidence 4678999999999886 689999999 6678889999999999999975 4444442
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|+||||+.+||.+|+++||++|
T Consensus 145 ----------------------~~KP~p~~--------------f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv 188 (245)
T d1qq5a_ 145 ----------------------VFKPHPDS--------------YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188 (245)
T ss_dssp ----------------------CCTTSHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred ----------------------ccCccHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEE
Confidence 24999999 999999999999999999999999999999999999
Q ss_pred EEc
Q 020675 319 VMR 321 (323)
Q Consensus 319 ~v~ 321 (323)
+|.
T Consensus 189 ~v~ 191 (245)
T d1qq5a_ 189 RVA 191 (245)
T ss_dssp EEC
T ss_pred EEc
Confidence 995
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=9.7e-23 Score=170.80 Aligned_cols=101 Identities=13% Similarity=0.212 Sum_probs=87.5
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
.+.++||+.++|+.|+++|++++|+||.. .....+..++.+++..+|..+..
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~--~~~~~~~~l~~~~~~~~~~~~~~-------------------------- 95 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTS--EIQGANQLLELFDLGKYFIQREI-------------------------- 95 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCS--CHHHHHHHHHHTTCGGGCSEEEE--------------------------
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccc--cchhhccchhcccccccceeeec--------------------------
Confidence 46799999999999999999999999842 23556777899999988876421
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|+. |..+++++|++|++|+||||+..|+++|+++||.+|
T Consensus 96 ----------------------~~kp~~~~--------------~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i 139 (164)
T d1u7pa_ 96 ----------------------YPGSKVTH--------------FERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCI 139 (164)
T ss_dssp ----------------------SSSCHHHH--------------HHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred ----------------------ccCCChHH--------------HHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEE
Confidence 12888888 999999999999999999999999999999999999
Q ss_pred EEcCC
Q 020675 319 VMRSR 323 (323)
Q Consensus 319 ~v~~g 323 (323)
+|.+|
T Consensus 140 ~v~~G 144 (164)
T d1u7pa_ 140 HIRDG 144 (164)
T ss_dssp ECSSC
T ss_pred EECCC
Confidence 99876
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=1.2e-22 Score=170.51 Aligned_cols=106 Identities=13% Similarity=0.183 Sum_probs=87.7
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc-CCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-GSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l-gl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
.....+++++.+++..++.+|++++++||. ........+..+ ++..+|+.++ ++++..
T Consensus 80 ~~~~~~~~~~~~l~~~l~~~~~~~~i~t~~---~~~~~~~~~~~~~~l~~~fd~v~-~s~~~~----------------- 138 (197)
T d2b0ca1 80 AVFVALRPEVIAIMHKLREQGHRVVVLSNT---NRLHTTFWPEEYPEIRDAADHIY-LSQDLG----------------- 138 (197)
T ss_dssp TCEEEECHHHHHHHHHHHHTTCEEEEEECC---CCCTTSCCGGGCHHHHHHCSEEE-EHHHHT-----------------
T ss_pred HhccccCchhHHHHHHHHhcCCeEEEEeCc---cHHHHHHHHHHcccchhhcccee-eccccc-----------------
Confidence 334568999999999999999999999994 334444455554 7888899854 444332
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
..||+|++ |+.+++++|++|++|+||||+.+|+++|+++||
T Consensus 139 -------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~ 179 (197)
T d2b0ca1 139 -------------------------MRKPEARI--------------YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGI 179 (197)
T ss_dssp -------------------------CCTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred -------------------------ccccchHH--------------HHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCC
Confidence 34999999 999999999999999999999999999999999
Q ss_pred CEEEEcC
Q 020675 316 PCVVMRS 322 (323)
Q Consensus 316 ~~v~v~~ 322 (323)
++|+|..
T Consensus 180 ~ti~v~~ 186 (197)
T d2b0ca1 180 TSILVKD 186 (197)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9999875
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=1.3e-19 Score=156.05 Aligned_cols=98 Identities=8% Similarity=0.097 Sum_probs=75.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHH-----------HHHcCCCccccceeechhhhhhhhhcccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSV-----------VEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~-----------l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
..+++++.+++. .+..+++.|+ ......... ++.+|+.++|+.+ ++++...
T Consensus 96 ~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v-~~~~~~~---------- 157 (225)
T d2g80a1 96 APVYADAIDFIK----RKKRVFIYSS---GSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGY-FDINTSG---------- 157 (225)
T ss_dssp BCCCHHHHHHHH----HCSCEEEECS---SCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEE-ECHHHHC----------
T ss_pred ccchhhHHHHHh----hHHhhhhhhh---ccchhhhhhhhhhhhhHHHHHHhcCCcccccee-eeccccC----------
Confidence 446777777665 4567888888 333333222 3556888899874 5543321
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
.||+|++ |+.+++++|++|++|+||||+.+|+.
T Consensus 158 ---------------------------------~KP~p~~--------------f~~~~~~lg~~p~e~l~VgD~~~Dv~ 190 (225)
T d2g80a1 158 ---------------------------------KKTETQS--------------YANILRDIGAKASEVLFLSDNPLELD 190 (225)
T ss_dssp ---------------------------------CTTCHHH--------------HHHHHHHHTCCGGGEEEEESCHHHHH
T ss_pred ---------------------------------CCCChhH--------------hHHHHHhcccCchhceeecCCHHHHH
Confidence 3999999 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcC
Q 020675 309 GAQRIGMPCVVMRS 322 (323)
Q Consensus 309 aA~~aG~~~v~v~~ 322 (323)
+|+++||++|+|..
T Consensus 191 ~A~~aG~~ti~v~r 204 (225)
T d2g80a1 191 AAAGVGIATGLASR 204 (225)
T ss_dssp HHHTTTCEEEEECC
T ss_pred HHHHcCCEEEEEeC
Confidence 99999999999963
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=6.4e-20 Score=153.48 Aligned_cols=109 Identities=12% Similarity=0.146 Sum_probs=75.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCC---C--Ch-------HHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGK---S--GD-------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~---~--~~-------~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.++||+.++|+.|+++|++++++||.+. + .. ......+...|+.. +.+.++......
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~i~~~~~~~~~-------- 98 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF--DEVLICPHLPAD-------- 98 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCE--EEEEEECCCGGG--------
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhcccccccc--ceeeeccccccc--------
Confidence 56899999999999999999999999530 0 01 12334455555532 211111100000
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
. +..+||+|.+ ++.+++++|++|++|+||||+..|+
T Consensus 99 --~----------------------------~~~~KP~p~~--------------~~~~~~~~~id~~~~~~IGD~~~Di 134 (161)
T d2fpwa1 99 --E----------------------------CDCRKPKVKL--------------VERYLAEQAMDRANSYVIGDRATDI 134 (161)
T ss_dssp --C----------------------------CSSSTTSSGG--------------GGGGC----CCGGGCEEEESSHHHH
T ss_pred --c----------------------------ccccccccHH--------------HHHHHHhcCCChhcEEEECCCHHHH
Confidence 0 0235999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcC
Q 020675 308 AGAQRIGMPCVVMRS 322 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~ 322 (323)
++|++|||++|++.+
T Consensus 135 ~aA~~aG~~~i~i~~ 149 (161)
T d2fpwa1 135 QLAENMGINGLRYDR 149 (161)
T ss_dssp HHHHHHTSEEEECBT
T ss_pred HHHHHcCCeEEEECC
Confidence 999999999999865
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.77 E-value=1.9e-19 Score=156.81 Aligned_cols=117 Identities=17% Similarity=0.192 Sum_probs=78.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCC-----CCCh-------HHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYG-----KSGD-------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~-----~~~~-------~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.++||+.++|+.|+++|++++|+||.+ .-.. ..+...+...|+. ++.+ +.+.....
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~--~~~~-~~~~~~~~-------- 115 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMV-LACAYHEA-------- 115 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEE-EEECCCTT--------
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccc--cceE-EEeccccc--------
Confidence 4589999999999999999999999931 0000 1122233333431 1211 11100000
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
+.+.....+ +.++||+|.+ +..+++++|+++++|+||||+.+|+
T Consensus 116 ~~~~~~~~~----------------------~~~rKP~p~m--------------l~~a~~~~~i~~~~~~~VGD~~~Di 159 (209)
T d2o2xa1 116 GVGPLAIPD----------------------HPMRKPNPGM--------------LVEAGKRLALDLQRSLIVGDKLADM 159 (209)
T ss_dssp CCSTTCCSS----------------------CTTSTTSCHH--------------HHHHHHHHTCCGGGCEEEESSHHHH
T ss_pred ccccccccc----------------------cccccccchh--------------hhHhHHHhCCCccceEEeCCCHHHH
Confidence 000000000 1246999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
++|++|||++++|.+|
T Consensus 160 ~aA~~AGi~~i~v~~g 175 (209)
T d2o2xa1 160 QAGKRAGLAQGWLVDG 175 (209)
T ss_dssp HHHHHTTCSEEEEETC
T ss_pred HHHHHCCCcEEEEeCC
Confidence 9999999999998765
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.77 E-value=8.9e-19 Score=152.15 Aligned_cols=175 Identities=14% Similarity=0.130 Sum_probs=109.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHHhcC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFLASK 158 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~ 158 (323)
...|+|||||||++++.. ..+++.++.+. | .++........ ..........+.. .+.+..... .
T Consensus 4 k~lVifD~DGTL~~~d~~------~~~~~~~~~~~--~-~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 72 (226)
T d2feaa1 4 KPFIICDFDGTITMNDNI------INIMKTFAPPE--W-MALKDGVLSKT-LSIKEGVGRMFGLLPSSLKEEITSFVL-E 72 (226)
T ss_dssp CEEEEECCTTTTBSSCHH------HHHHHHHSCTH--H-HHHHHHHHTTS-SCHHHHHHHHHTTSBGGGHHHHHHHHH-H
T ss_pred CeEEEEeCCCCCcCchHH------HHHHHHHCcch--H-HHHHHHHHcCc-ccHHHHHHHHHHHhccccHHHHHHHHH-h
Confidence 458999999999987643 44555555541 2 23333222211 1122111111110 222222222 2
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc-eeechhhhhhhhhcccccccccccCcch
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~-~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
.++++||+.++|+.|+++|++++++|| +....++.+++++|+.++|.. .+...++..... ......
T Consensus 73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~---~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~----~~~~~~------ 139 (226)
T d2feaa1 73 DAKIREGFREFVAFINEHEIPFYVISG---GMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID----WPHSCK------ 139 (226)
T ss_dssp HCCBCTTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE----CTTCCC------
T ss_pred ccchhHHHHHHHHHHHhcccccccCCc---chhhhHHHHHHHcCCccceeeeeEEEeCCcceec----cccccc------
Confidence 367999999999999999999999999 788999999999998776532 111111111000 000000
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
....||.|.. ...+++++++++++++|||||.+|+.||++||+..
T Consensus 140 ---------------------~~~~~~k~~~--------------~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~ 184 (226)
T d2feaa1 140 ---------------------GTCSNQCGCC--------------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF 184 (226)
T ss_dssp ---------------------TTCCSCCSSC--------------HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred ---------------------cccccCCHHH--------------HHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence 0112566666 78889999999999999999999999999999754
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=1.5e-17 Score=147.61 Aligned_cols=49 Identities=14% Similarity=0.186 Sum_probs=45.9
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||++|+|.+|
T Consensus 174 ~~KP~p~~--------------~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G 223 (250)
T d2c4na1 174 VGKPSPWI--------------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 223 (250)
T ss_dssp CSTTSTHH--------------HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSS
T ss_pred cccchhhh--------------HhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCC
Confidence 45999999 9999999999999999999997 5999999999999999886
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=1.8e-17 Score=140.74 Aligned_cols=49 Identities=12% Similarity=0.224 Sum_probs=44.8
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE-EEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC-VVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~-v~v~~g 323 (323)
++||+|.+ +..+++++++++++++||||+.+|+++|++||+.+ ++|.+|
T Consensus 106 ~rKP~p~m--------------~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g 155 (182)
T d2gmwa1 106 CRKPHPGM--------------LLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTG 155 (182)
T ss_dssp SSTTSCHH--------------HHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSS
T ss_pred ccCCcccc--------------ccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCC
Confidence 56999999 99999999999999999999999999999999975 667654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=4.9e-17 Score=141.60 Aligned_cols=177 Identities=12% Similarity=0.171 Sum_probs=101.9
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHH---HHh-HHHHHHHHHhcCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL---FFN-RKNALDEFLASKD 159 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~i~~~~ 159 (323)
.++|+|||||||++.+. +.++....|... .+ .+.....+... ......... .+. ......+.+....
T Consensus 10 ~~aV~FD~DGTLi~~e~------~~~l~~~~g~~~-~~-~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (217)
T d1nnla_ 10 ADAVCFDVDSTVIREEG------IDELAKICGVED-AV-SEMTRRAMGGA-VPFKAALTERLALIQPSREQVQRLIAEQP 80 (217)
T ss_dssp CSEEEEETBTTTBSSCH------HHHHHHHTTCTT-TC--------------CHHHHHHHHHHHHCCCHHHHHHHHHHSC
T ss_pred CCEEEEcCccccCCccH------HHHHHHHcCChH-HH-HHHHHHHHcCC-CCHHHHHHHHHHhcccchHHHHHHHHhhc
Confidence 46999999999999864 355556667652 11 12222211110 011111111 111 1222333334455
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh-hhh-hhhhcccccccccccCcch
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVE-RSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~-~~~-~~~~~~~~~g~~v~~~~~~ 237 (323)
..++||+.++++.|+++|++++|+|+ +....++.+++.+|++.+.. ++.+ ++. .+.+. |
T Consensus 81 ~~l~pg~~~~i~~lk~~G~~~~ivS~---~~~~~v~~i~~~lgi~~~~v---~an~~~~~~~G~~~----g--------- 141 (217)
T d1nnla_ 81 PHLTPGIRELVSRLQERNVQVFLISG---GFRSIVEHVASKLNIPATNV---FANRLKFYFNGEYA----G--------- 141 (217)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHTTCCGGGE---EEECEEECTTSCEE----E---------
T ss_pred cccCHHHHHHHHHHHhCCCEEEEECC---CchHHHHHHHHHhCCcccce---eeeeeeeeehhccc----c---------
Confidence 77999999999999999999999999 78899999999999985321 1110 000 00000 0
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
..++.|.. .+..+... .+.+.+. +++++|++||||.+|+.+++.||+.+
T Consensus 142 -----------------------~~~~~p~~---~~~~K~~~---v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~v 190 (217)
T d1nnla_ 142 -----------------------FDETQPTA---ESGGKGKV---IKLLKEK--FHFKKIIMIGDGATDMEACPPADAFI 190 (217)
T ss_dssp -----------------------ECTTSGGG---STTHHHHH---HHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEE
T ss_pred -----------------------ceeeeeee---ccchHHHH---HHHHHhc--cCccccEEEEeCHhhHHHHHhCCceE
Confidence 01333322 11222232 3344443 46789999999999999999999875
Q ss_pred EE
Q 020675 318 VV 319 (323)
Q Consensus 318 v~ 319 (323)
++
T Consensus 191 a~ 192 (217)
T d1nnla_ 191 GF 192 (217)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.69 E-value=7.6e-17 Score=143.23 Aligned_cols=47 Identities=4% Similarity=0.117 Sum_probs=45.0
Q ss_pred CCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh-hHHHHHHcCCCEEEEcCC
Q 020675 263 KLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 263 KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~-Di~aA~~aG~~~v~v~~g 323 (323)
||+|.+ |+.+++++|++|++|+||||+.. ||.+|+++||++|+|.+|
T Consensus 180 KP~p~~--------------~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G 227 (253)
T d1wvia_ 180 KPEAVI--------------MNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTG 227 (253)
T ss_dssp TTSHHH--------------HHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSS
T ss_pred cCCccc--------------ceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCC
Confidence 999999 99999999999999999999975 999999999999999876
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.68 E-value=4.6e-16 Score=146.73 Aligned_cols=116 Identities=16% Similarity=0.055 Sum_probs=89.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccce-eechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-IVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~-v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
++|+||+.++|+.|+++|++++++|| .+...++.+++.+|+.++|+.. +++.+++...... ....
T Consensus 214 i~p~~~v~~~l~~lk~aGi~v~i~Tg---~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~---~~~~-------- 279 (380)
T d1qyia_ 214 LRPVDEVKVLLNDLKGAGFELGIATG---RPYTETVVPFENLGLLPYFEADFIATASDVLEAENM---YPQA-------- 279 (380)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHH---STTS--------
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhh---cccc--------
Confidence 34677999999999999999999999 6789999999999999999753 3455554321000 0000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHH--------------cCCCCCcEEEEcCCh
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY--------------AEKPVRNCFLIAGSQ 304 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~--------------lgv~p~~~v~VGDs~ 304 (323)
....||+|++ |..++.. +++.+++|+||||+.
T Consensus 280 --------------------~~~~KP~p~~--------------~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~ 325 (380)
T d1qyia_ 280 --------------------RPLGKPNPFS--------------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL 325 (380)
T ss_dssp --------------------CCCCTTSTHH--------------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH
T ss_pred --------------------ccccCCChHH--------------HHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCH
Confidence 0134999998 7776654 456789999999999
Q ss_pred hhHHHHHHcCCCEEEEcCC
Q 020675 305 SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 305 ~Di~aA~~aG~~~v~v~~g 323 (323)
+|+.+|++||+.+|+|.+|
T Consensus 326 ~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 326 ADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp HHHHHHHHHTCEEEEESCB
T ss_pred HHHHHHHHCCCCEEEEecC
Confidence 9999999999999999765
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.66 E-value=4.3e-16 Score=138.49 Aligned_cols=48 Identities=10% Similarity=0.083 Sum_probs=45.3
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
.||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||++|+|.+|
T Consensus 184 ~KP~p~~--------------~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G 232 (261)
T d1vjra_ 184 GKPNPLV--------------VDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTG 232 (261)
T ss_dssp STTSTHH--------------HHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSS
T ss_pred CCCcHHH--------------HHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCC
Confidence 5999999 9999999999999999999996 6999999999999999876
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.64 E-value=2.2e-16 Score=133.82 Aligned_cols=176 Identities=13% Similarity=0.151 Sum_probs=109.1
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh----H-HHHHHHHHhc
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----R-KNALDEFLAS 157 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~i~~ 157 (323)
+.|+|+||+||||+|++. +..+++++|+.. ........... .............. . ........
T Consensus 3 kkKlv~FDlDGTL~d~es------~~~l~~~~g~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 71 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNNET------IDEIAREAGVEE--EVKKITKEAME-GKLNFEQSLRKRVSLLKDLPIEKVEKAI-- 71 (210)
T ss_dssp CCCEEEECCCCCCBSSCH------HHHHHHHTTCHH--HHHHHHHHHHT-TSSCHHHHHHHHHHTTTTCBHHHHHHHH--
T ss_pred CCeEEEEeCCCCcCCchH------HHHHHHHcCCcH--HHHHHHHHHhc-ccchhHHHHHHHHHHHhhhHHHHHHHHh--
Confidence 578999999999999875 355666777641 11111111111 11111111111100 0 11222211
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
....+.+|+.++++.++.+|+.++++|+ +.........+..+...++...+...+....
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 130 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSG---GFDIAVNKIKEKLGLDYAFANRLIVKDGKLT------------------ 130 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEE---EEHHHHHHHHHHHTCSEEEEEEEEEETTEEE------------------
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecc---cccccccchhhccchhhhhhhhhcccccccc------------------
Confidence 2356899999999999999999999999 6778888889999988877654322211100
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
...+.. ....++.... +...++.+++.++++++||||.||+.|++.||+.+
T Consensus 131 -------------------------~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~v 181 (210)
T d1j97a_ 131 -------------------------GDVEGE-VLKENAKGEI---LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI 181 (210)
T ss_dssp -------------------------EEEECS-SCSTTHHHHH---HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEE
T ss_pred -------------------------cccccc-ccccccccch---hhhHHHHhcccccceEEecCCcChHHHHHHCCCCE
Confidence 000000 0001111111 67888999999999999999999999999999986
Q ss_pred EE
Q 020675 318 VV 319 (323)
Q Consensus 318 v~ 319 (323)
++
T Consensus 182 a~ 183 (210)
T d1j97a_ 182 AF 183 (210)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.63 E-value=7.5e-16 Score=136.47 Aligned_cols=49 Identities=8% Similarity=0.127 Sum_probs=45.7
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.+ |+++++++|++|++|+||||+. +||++|+++||++|+|.+|
T Consensus 178 ~~KP~~~~--------------~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G 227 (253)
T d1yv9a1 178 IGKPKAII--------------MERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSG 227 (253)
T ss_dssp CSTTSHHH--------------HHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTS
T ss_pred ecccchhH--------------HHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCC
Confidence 36999999 9999999999999999999996 5999999999999999876
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.63 E-value=2.2e-16 Score=128.64 Aligned_cols=41 Identities=20% Similarity=0.091 Sum_probs=33.6
Q ss_pred HHHHHHHcCCCCCcE-EEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNC-FLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~-v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
....+.++..++.++ ++|||+..||+||+++|++++.|.+|
T Consensus 106 k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 106 KEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 455666666666665 57899999999999999999999987
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.36 E-value=1.1e-12 Score=110.26 Aligned_cols=166 Identities=17% Similarity=0.145 Sum_probs=100.8
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCH---HHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA---PIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDA 160 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 160 (323)
+|.|+|||||||++. .|.+++++.|+.....+. ..|...+.. ....+.........+... ....
T Consensus 2 mkli~fDlDGTLl~e-------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~----~v~ll~~~~~~~~~~~~~--~~~~ 68 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE-------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ----RLRILDEHGLKLGDIQEV--IATL 68 (206)
T ss_dssp CEEEEEESBTTTBCC-------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH----HHHHHHHTTCCHHHHHHH--HTTC
T ss_pred cEEEEEcCccchHHH-------HHHHHHHHcCCHHHHHHCCCCCCHHHHHHH----HHHHHHhCCCceehhhhh--hhhc
Confidence 589999999999973 245666777875210000 001111100 000000000001122221 2346
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
...++....+..++ .+++.+++|. +...........+++..++............ ..
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~s~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~------------ 125 (206)
T d1rkua_ 69 KPLEGAVEFVDWLR-ERFQVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-------VG------------ 125 (206)
T ss_dssp CCCTTHHHHHHHHH-TTSEEEEEEE---EEHHHHHHHHHHTTCCCEEEEEEEECTTSCE-------EE------------
T ss_pred cccchHHHHHHHhh-cCceEEEecc---CchHHHHHHHHHhCCchhhcceeeeeccccc-------cc------------
Confidence 78899988888775 6799999998 6788888889988887665543221111100 00
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
...+.+.. ....++++|++++++++|||+.||+.|.+.||+.+++
T Consensus 126 --------------------~~~~~~~~--------------~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm 170 (206)
T d1rkua_ 126 --------------------YQLRQKDP--------------KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF 170 (206)
T ss_dssp --------------------EECCSSSH--------------HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred --------------------ccccchhh--------------HHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE
Confidence 00222222 4567889999999999999999999999999998876
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=3.4e-10 Score=96.76 Aligned_cols=97 Identities=8% Similarity=0.091 Sum_probs=67.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHH-HcCCCcccc-ceeechhhhhhhhhcccccccccccCcch
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~-~lgl~~~fd-~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
..+.||+.+|++.++++|+++..+||........+...|. .+|+...-. .+++..+
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~---------------------- 142 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGD---------------------- 142 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCC----------------------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCC----------------------
Confidence 4578999999999999999999999976555555556664 488742211 1122211
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
+|.... -+..++++++ .+++||..+|+.+|+++|+++
T Consensus 143 -------------------------~~~K~~--------------rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~ 179 (209)
T d2b82a1 143 -------------------------KPGQNT--------------KSQWLQDKNI----RIFYGDSDNDITAARDVGARG 179 (209)
T ss_dssp -------------------------CTTCCC--------------SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEE
T ss_pred -------------------------CCCchH--------------HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCc
Confidence 111111 1233467776 789999999999999999999
Q ss_pred EEEc
Q 020675 318 VVMR 321 (323)
Q Consensus 318 v~v~ 321 (323)
|.|.
T Consensus 180 iRi~ 183 (209)
T d2b82a1 180 IRIL 183 (209)
T ss_dssp EECC
T ss_pred eEee
Confidence 9874
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.05 E-value=1.6e-10 Score=98.26 Aligned_cols=98 Identities=20% Similarity=0.250 Sum_probs=70.5
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCC-----CCCh----HHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYG-----KSGD----RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~-----~~~~----~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
++|++.+.|+.|.++|+.++|+||.+ .-.. .....+++.++... .+ .++...
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~~--~i-~~~~~~---------------- 111 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPF--QV-LVATHA---------------- 111 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSCC--EE-EEECSS----------------
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCCc--cE-EEecCc----------------
Confidence 57999999999999999999999942 0011 22344555555432 21 111110
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCC-----
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGS----- 303 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg----v~p~~~v~VGDs----- 303 (323)
+.++||.|.+ ++.+++.++ ++.++++||||.
T Consensus 112 --------------------------~~~RKP~~GM--------------~~~~~~~~n~~~~id~~~S~~IGD~~gr~~ 151 (195)
T d1yj5a1 112 --------------------------GLNRKPVSGM--------------WDHLQEQANEGIPISVEDSVFVGDAAGRLA 151 (195)
T ss_dssp --------------------------SSSSTTSTHH--------------HHHHHHTSSSSCCCCGGGCEEECSCCCBCT
T ss_pred --------------------------cccCCCccHH--------------HHHHHHHhcccccCCcCceEEEeCccCccc
Confidence 0246999999 899999875 889999999994
Q ss_pred ------------hhhHHHHHHcCCCEE
Q 020675 304 ------------QSGVAGAQRIGMPCV 318 (323)
Q Consensus 304 ------------~~Di~aA~~aG~~~v 318 (323)
..|++.|+++|++..
T Consensus 152 ~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 152 NWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred cccccccccCcchhHHHHHHHCCCccc
Confidence 489999999999864
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.96 E-value=1.5e-09 Score=92.21 Aligned_cols=36 Identities=6% Similarity=0.196 Sum_probs=33.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.+++++|++++++++|||+.||+.|++.+|+.++
T Consensus 157 l~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~va 192 (230)
T d1wr8a_ 157 IEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVA 192 (230)
T ss_dssp HHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred hcccccccccchhheeeeecCccHHHHHHHCCeEEE
Confidence 788899999999999999999999999999998644
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=3.8e-09 Score=92.52 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=34.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++.++++++++++|||+.||+.|.+.+|..+++
T Consensus 201 al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am 238 (271)
T d1rkqa_ 201 GVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV 238 (271)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe
Confidence 37889999999999999999999999999999976543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.88 E-value=3.7e-09 Score=95.15 Aligned_cols=53 Identities=26% Similarity=0.493 Sum_probs=45.7
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
.+.+.+....+.++||+.++++.|+++|++++|+|+ +....++.+++.+|+..
T Consensus 124 ~i~~~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSg---G~~~~ie~vl~~lg~~~ 176 (291)
T d2bdua1 124 KLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA---GIGDVLEEVIRQAGVYH 176 (291)
T ss_dssp GHHHHHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEE---EEHHHHHHHHHHTTCCB
T ss_pred HHHHHHHhcCCCcccCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHcCCCc
Confidence 444455555688999999999999999999999999 78999999999999863
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.84 E-value=2.5e-09 Score=91.66 Aligned_cols=36 Identities=11% Similarity=-0.041 Sum_probs=33.3
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.+++++|++++++++|||+.||+.+++.+|+.++
T Consensus 156 i~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~va 191 (225)
T d1l6ra_ 156 VNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC 191 (225)
T ss_dssp HHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE
T ss_pred HHHHhhhhccchhheeeecCCcchHHHHHHCCeEEE
Confidence 688899999999999999999999999999997654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.79 E-value=1.7e-08 Score=88.83 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=34.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 217 ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam 254 (285)
T d1nrwa_ 217 ALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM 254 (285)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe
Confidence 47889999999999999999999999999999977643
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=6.5e-08 Score=81.72 Aligned_cols=47 Identities=6% Similarity=0.035 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 275 SLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 275 ~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
.+...+..+...++++|++++++++|||+.||+.|.+.+|. .|.|.+
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n 230 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKG 230 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCC
T ss_pred hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeC
Confidence 44444444555566789999999999999999999999997 455544
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.47 E-value=8.9e-08 Score=83.61 Aligned_cols=36 Identities=3% Similarity=0.016 Sum_probs=33.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
+..+++.++++++++++|||+.||+.|.+.+|..++
T Consensus 212 l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va 247 (283)
T d2b30a1 212 INYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA 247 (283)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE
T ss_pred HHHHhhhcccccceEEEecCChhhHHHHHhCCcEEE
Confidence 788899999999999999999999999999998654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.37 E-value=1.1e-07 Score=82.74 Aligned_cols=38 Identities=3% Similarity=-0.004 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
++.+++++|++++++++|||+.||+.|.+.+|..+ .|.
T Consensus 191 l~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~sv-av~ 228 (260)
T d2rbka1 191 IDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV-AMG 228 (260)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECT
T ss_pred HHHHHHhccccHhheeEecCCcccHHHHHhCCeEE-EeC
Confidence 78889999999999999999999999999999964 443
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.30 E-value=6.2e-07 Score=78.22 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=33.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.+++++|++++++++|||+.||+.|.+.+|..++
T Consensus 195 i~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva 230 (267)
T d1nf2a_ 195 LRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVA 230 (267)
T ss_dssp HHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEE
T ss_pred HHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEE
Confidence 788899999999999999999999999999998654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.30 E-value=2.2e-06 Score=72.68 Aligned_cols=37 Identities=5% Similarity=0.035 Sum_probs=32.1
Q ss_pred HHHHHHHc-CCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYA-EKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~l-gv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+..+++++ ++.++++++|||+.||+.|.+.+|..+++
T Consensus 184 l~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~ 221 (243)
T d1wzca1 184 AKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (243)
T ss_dssp HHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred HHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe
Confidence 56778888 48899999999999999999999976554
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.26 E-value=1.1e-06 Score=75.37 Aligned_cols=36 Identities=3% Similarity=-0.086 Sum_probs=33.3
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.+.+++++|++++++++|||+.||+.|.+.+|..++
T Consensus 167 ~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~va 202 (244)
T d1s2oa1 167 TQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVI 202 (244)
T ss_dssp HHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEE
T ss_pred HHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEE
Confidence 688999999999999999999999999999997654
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.23 E-value=2.1e-07 Score=77.99 Aligned_cols=29 Identities=14% Similarity=0.108 Sum_probs=24.2
Q ss_pred CCCCChhHHHHHHHHHHCC-CcEEEEcCCC
Q 020675 159 DAPLRPGVEDFVDDAYNEG-IPLIVLTAYG 187 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~G-i~l~ivTn~~ 187 (323)
.++++||+.++++.|++.| +.+.++|...
T Consensus 72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~ 101 (195)
T d1q92a_ 72 ELEPLPGAVEAVKEMASLQNTDVFICTSPI 101 (195)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred hCCcccCHHHHHHHHhhccCccceEEcccc
Confidence 5889999999999999865 4678888854
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.15 E-value=3.6e-06 Score=66.65 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=40.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+++|++.+.++.|++.|++++++|+ .....+..+-+.+|++.+|.
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTG---D~~~~a~~ia~~lgI~~v~~ 65 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITG---DNWRSAEAISRELNLDLVIA 65 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHHTCSEEEC
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcC---cchhhhhHHHhhhhhhhhcc
Confidence 4899999999999999999999998 67888899999999976554
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.01 E-value=4.3e-06 Score=69.21 Aligned_cols=82 Identities=17% Similarity=0.089 Sum_probs=64.0
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
.+..|+..|+.++++|. .....+......+++...+... .+.
T Consensus 40 gi~~l~~~gi~~~iis~---~~~~~v~~~~~~l~~~~~~~~~----~~K------------------------------- 81 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSG---RDSPILRRRIADLGIKLFFLGK----LEK------------------------------- 81 (177)
T ss_dssp HHHHHHHTTCEEEEEES---CCCHHHHHHHHHHTCCEEEESC----SCH-------------------------------
T ss_pred HHHHHhhhcEEEEEecC---CchhHHHHHHhhhccccccccc----ccH-------------------------------
Confidence 36778889999999998 4567888888888887644321 000
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
. .+++..++++|+++++|+||||..+|+.+.+.+|+.++.
T Consensus 82 -----------------~--------------~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap 121 (177)
T d1k1ea_ 82 -----------------E--------------TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV 121 (177)
T ss_dssp -----------------H--------------HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred -----------------H--------------HHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc
Confidence 0 016788999999999999999999999999999987653
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.84 E-value=6.3e-06 Score=69.24 Aligned_cols=33 Identities=0% Similarity=-0.072 Sum_probs=26.9
Q ss_pred cCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEEcC
Q 020675 290 AEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 290 lgv~p~~~v~VGD----s~~Di~aA~~aG~~~v~v~~ 322 (323)
++++++++++||| +.||++|.+.+|...++|.+
T Consensus 194 ~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 194 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 4678999999999 77999999999977777654
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.81 E-value=3.7e-05 Score=62.79 Aligned_cols=42 Identities=21% Similarity=0.326 Sum_probs=38.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
+++|++.+.|+.|++.|+++.++|+ .....+..+-+.+|+..
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTG---D~~~tA~~ia~~~Gi~~ 61 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITG---DNKGTAIAICRRIGIFG 61 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECS---SCHHHHHHHHHHTTSSC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECC---CCHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999 67888999999999853
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.75 E-value=1.9e-05 Score=74.13 Aligned_cols=126 Identities=9% Similarity=0.020 Sum_probs=80.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-c--------CCCccccceeechhhhhhhhhccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-L--------GSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-l--------gl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
...|.+..+|..|+++|-++.++|| +....+...++. + .+.++||++|+.+. ..+.|+..-.--.+
T Consensus 185 ~k~~~l~~~L~~lr~~GKklFLiTN---S~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~--KP~FF~~~~~~~~v 259 (458)
T d2bdea1 185 IREKEVVEGLKHFIRYGKKIFILTN---SEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLAN--KPRFFYDNLRFLSV 259 (458)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECS---SCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCC--HHHHHHSCCCEEEE
T ss_pred cCChhHHHHHHHHHHcCCeEEEEec---CcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCC--CCCccCCCCcceEE
Confidence 3578999999999999999999999 667888777765 4 57789998766543 11223211000000
Q ss_pred --ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHH
Q 020675 232 --SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVA 308 (323)
Q Consensus 232 --~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~ 308 (323)
..|.-.. +.+..| +.+|.+.. .....+.+|....++++|||+. .||.
T Consensus 260 ~~~~g~l~~-------------------~~~~~~--~~vY~gGn---------~~~l~~llg~~g~~VLY~GDhi~~Di~ 309 (458)
T d2bdea1 260 NPENGTMTN-------------------VHGPIV--PGVYQGGN---------AKKFTEDLGVGGDEILYIGDHIYGDIL 309 (458)
T ss_dssp CTTTCCEEE-------------------CCSCCC--SEEEEECC---------HHHHHHHTTCCGGGEEEEESSCCSCHH
T ss_pred eCCCCcccc-------------------CCcccc--CCccccCC---------HHHHHHHhCCCCCcEEEECCccchhhh
Confidence 0000000 000011 22332211 4566788899999999999996 6977
Q ss_pred HHH-HcCCCEEEEc
Q 020675 309 GAQ-RIGMPCVVMR 321 (323)
Q Consensus 309 aA~-~aG~~~v~v~ 321 (323)
.++ ..||+|++|.
T Consensus 310 ~~kk~~gWrT~~Ii 323 (458)
T d2bdea1 310 RLKKDCNWRTALVV 323 (458)
T ss_dssp HHHHHHCSEEEEEC
T ss_pred hhhhhcCCceEEeh
Confidence 775 5799999885
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=7.1e-05 Score=62.29 Aligned_cols=32 Identities=3% Similarity=-0.097 Sum_probs=27.2
Q ss_pred CCCCCcEEEEcCCh----hhHHHHHHcCCCEEEEcC
Q 020675 291 EKPVRNCFLIAGSQ----SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 291 gv~p~~~v~VGDs~----~Di~aA~~aG~~~v~v~~ 322 (323)
+.+++++++|||+. ||++|-+.+|...+.|.+
T Consensus 195 ~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 195 QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 45899999999975 999999999977777654
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.10 E-value=0.00029 Score=54.41 Aligned_cols=44 Identities=16% Similarity=0.080 Sum_probs=35.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCC------------ChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~------------~~~~~~~~l~~lgl~ 204 (323)
.|.+++.+.|..|+++|+.+.+.|.++.. ....+...|+..|+.
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~ 79 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP 79 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC
Confidence 58899999999999999999999995311 124577788888884
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.00026 Score=60.61 Aligned_cols=38 Identities=8% Similarity=-0.020 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 194 al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam 231 (269)
T d1rlma_ 194 GISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM 231 (269)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC
T ss_pred HHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe
Confidence 37889999999999999999999999999999988764
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=96.79 E-value=0.00035 Score=59.77 Aligned_cols=38 Identities=16% Similarity=0.082 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
.+.+.|+.|+++|+.++++|++ ....+...++.+++..
T Consensus 24 ~~~~~l~~l~~~gi~~~i~TGR---~~~~~~~~~~~l~~~~ 61 (269)
T d1rlma_ 24 RFMAQYQELKKRGIKFVVASGN---QYYQLISFFPELKDEI 61 (269)
T ss_dssp HHHHHHHHHHHHTCEEEEECSS---CHHHHGGGCTTTTTTS
T ss_pred HHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHhCccc
Confidence 3455677788889999999983 4455555566666543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.55 E-value=0.51 Score=39.73 Aligned_cols=42 Identities=17% Similarity=0.232 Sum_probs=37.4
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.+.+.||+.++|+.|.+. .+.+|+|. +...+++.+..++|+.
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvST---SY~qyi~al~~~~gfp 120 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVIST---SYTQYLRRTASMIGVR 120 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEE---EEHHHHHHHHHHTTCC
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEec---cHHHHHHHHHhhcCCC
Confidence 478999999999999877 88888888 6889999999999984
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.02 E-value=0.03 Score=45.23 Aligned_cols=47 Identities=21% Similarity=0.250 Sum_probs=41.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccce
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 210 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~ 210 (323)
+..+||+.+||+.+.+. +.++|.|. +...+++.+++.++....|...
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta---~~~~YA~~il~~ldp~~~~~~~ 100 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTA---SLAKYADPVADLLDKWGAFRAR 100 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECS---SCHHHHHHHHHHHCSSCCEEEE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcC---CcHHHHHHHHHHhccCCceeEE
Confidence 45899999999999876 99999999 6789999999999887776654
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.49 E-value=0.026 Score=45.68 Aligned_cols=23 Identities=9% Similarity=0.036 Sum_probs=20.6
Q ss_pred CCcEEEEcCChhhHHHHHHcCCC
Q 020675 294 VRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 294 p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
.+++++|||+.||+.|.+.+|..
T Consensus 170 ~~~~i~~GDs~ND~~Mf~~~~~~ 192 (229)
T d1u02a_ 170 ERPAIIAGDDATDEAAFEANDDA 192 (229)
T ss_dssp TSCEEEEESSHHHHHHHHTTTTS
T ss_pred cccceeecCCCChHHHHhccCCe
Confidence 47899999999999999999765
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=90.88 E-value=0.34 Score=39.04 Aligned_cols=38 Identities=13% Similarity=-0.009 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
++.+.|..+++.+-++++++.. +.......+-+.+|++
T Consensus 82 Dil~al~~a~~~~~kiavV~~~--~~~~~~~~~~~ll~~~ 119 (186)
T d2pjua1 82 DVLQFLAKAGKLTSSIGVVTYQ--ETIPALVAFQKTFNLR 119 (186)
T ss_dssp HHHHHHHHTTCTTSCEEEEEES--SCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCCEEEEeCC--ccchHHHHHHHHhCCc
Confidence 5566666667778899999874 3456677777888886
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=90.02 E-value=0.1 Score=39.28 Aligned_cols=44 Identities=16% Similarity=-0.071 Sum_probs=32.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
+|.|++.++|+.|+++|+.+++.|+++..........+++.|+.
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 37899999999999999999999995422223445566666664
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=88.28 E-value=0.081 Score=42.44 Aligned_cols=17 Identities=41% Similarity=0.497 Sum_probs=14.7
Q ss_pred CceEEEEecCCcccccc
Q 020675 83 RDLAVLLEVDGVLVDAY 99 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~ 99 (323)
.+|++|||+||||+|..
T Consensus 4 ~ik~~i~DvDGVlTDG~ 20 (177)
T d1k1ea_ 4 NIKFVITDVDGVLTDGQ 20 (177)
T ss_dssp GCCEEEEECTTTTSCSE
T ss_pred cCeEEEEccCCcccCCe
Confidence 57899999999999843
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=86.51 E-value=0.29 Score=38.94 Aligned_cols=13 Identities=38% Similarity=0.685 Sum_probs=11.4
Q ss_pred EEEEecCCccccc
Q 020675 86 AVLLEVDGVLVDA 98 (323)
Q Consensus 86 aViFD~DGTLid~ 98 (323)
.|+||+||||++.
T Consensus 2 Li~~DlDGTL~~~ 14 (229)
T d1u02a_ 2 LIFLDYDGTLVPI 14 (229)
T ss_dssp EEEEECBTTTBCC
T ss_pred EEEEEecCCCCCC
Confidence 6899999999973
|