Citrus Sinensis ID: 020697

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
Protein Sequence
MGTQTMGSEGDAAAQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENNFHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQHQNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEVILPCAPPPEPKYQLRRTGSAPF
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEHHHHHHHHcccccccccccHHHHHHHHHccccccccccccccccccccccccccccccHHHHcHHHHHccccccccHHHHHHccccccccHHHHHHcccccccccccccccccccccccccHHHccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEccccccccccccccccccccccEEEEcHHHHHHHHcccccccccccHHHHHHHcccHHHHHcccccccccccccccccccHcHHcHHHHHHHHHHcccccccccccccccccccHccHHHHHHHcccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccc
Coil and Loop (DISEMBL)
mgtqtmgsegDAAAQAKNMLSltrqgslynLTLDEIQSqlgdrgkplgsmnLDELLKSVWTAennfhsepalslhrqgsltlaqdlsnkTVDEVWKDIRQKKSDDNQENEAQARQTSLGEMTLEDFLIKagavnesttpgqnnsgpglevdsIATVQQNVSQHAQWMQyqlpsvqlqpqhqhqHQNNLMAvympthtiqqslpitanpvldaqypdnqmtmspsslmgalsdtqtpgrkrvasgdVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEvilpcapppepkyqlrrtgsapf
Flexible Loop (DISEMBL)
mgtqtmgsegdAAAQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENNFHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIrqkksddnqenEAQArqtslgemTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQHQNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGALSdtqtpgrkrvasgdvvektverrqkrmiknresaarsrarkqaytqelenkvsrleeeNERLRRQRaevilpcapppepkyqlrrtgsapf
Low Complexity Region (SEG)
MGTQTMGSEGDAAAQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENNFHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYqlpsvqlqpqhqhqhqnnlMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSrleeenerlrrqraeVILPCAPPPEPKYQLRRTGSAPF
Disordered region (IsUnstruct)
***************************LYNLTL******************LDELLKSVWTAENN************************************************************FLI***********************************AQWMQYQL****************LMAVYMPTHTIQQSLPITA********************************************************************************************************************
Disordered Region (DISOPRED)
******************************LTLDEIQSQLGDRGKPLGSMNLDELLKSVW*********************************************************************************************************************************************************************************************************************AYTQELENKVSRLEEE**************************RTGS***
Disordered Region (DISEMBL)
*************AQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENNFHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQK**************TSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPS**********HQNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGA********************TVERRQKRMI****************TQELENKVSRLEEENERLRRQRAEVILPCAPPPEPK***********
Disordered Region (DISPRO)
***********************RQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENN*H*************TLAQDLSNKTVDEVWKDIRQKK**************SLGEMTLEDFLIKAGAVNEST**************SIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQHQNNLMAVYMPTHTIQQSLPIT*****************************************VEKT*************SAARSRARKQAYTQELENKVSRLEEENERLRRQRAEVILPCAPPPE*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGTQTMGSEGDAAAQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENNFHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQHQNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVILPCAPPPEPKYQLRRTGSAPF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	322	2.2.26 [Sep-21-2011]
Q9LES3	297	ABSCISIC ACID-INSENSITIVE	yes	no	0.878	0.952	0.583	1e-83
Q9C5Q2	262	ABSCISIC ACID-INSENSITIVE	no	no	0.763	0.938	0.513	3e-68
Q9M7Q5	392	ABSCISIC ACID-INSENSITIVE	no	no	0.931	0.765	0.388	1e-42
Q6ZDF3	318	bZIP transcription factor	no	no	0.751	0.761	0.355	1e-28
Q9FMM7	370	ABSCISIC ACID-INSENSITIVE	no	no	0.900	0.783	0.309	2e-25
Q9M7Q2	431	ABSCISIC ACID-INSENSITIVE	no	no	0.363	0.271	0.454	6e-24
Q8RYD6	331	ABSCISIC ACID-INSENSITIVE	no	no	0.763	0.743	0.350	1e-22
Q9M7Q4	416	ABSCISIC ACID-INSENSITIVE	no	no	0.344	0.266	0.455	9e-22
Q9SJN0	442	Protein ABSCISIC ACID-INS	no	no	0.363	0.264	0.365	3e-18
Q9M7Q3	454	ABSCISIC ACID-INSENSITIVE	no	no	0.366	0.259	0.378	4e-18

>sp|Q9LES3|AI5L2_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1

 Score =  310 bits (793), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 193/331 (58%), Positives = 221/331 (66%), Gaps = 48/331 (14%)

Query: 6   MGSEGDAAAQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENN 65
           M S+     QAK+  SL RQ SLY+LTLDE+Q+ LG  GK LGSMNLDELLKSV + E N
Sbjct: 1   MDSQRGIVEQAKSQ-SLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEAN 59

Query: 66  FHSEPALS--------LHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTS 117
             S  A++        L RQGSLTL +DLS KTVDEVWKDI+Q K +    +E + +Q +
Sbjct: 60  QPSSMAVNGGAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNK-NGGSAHERRDKQPT 118

Query: 118 LGEMTLEDFLIKAGAVNESTTPGQNNSGP--GLEVDSIATVQQNVSQHAQWMQY-QLPSV 174
           LGEMTLED L+KAG V E T PG N+ GP  G    S A + QN++Q   W+QY QLPS+
Sbjct: 119 LGEMTLEDLLLKAGVVTE-TIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQYHQLPSM 177

Query: 175 QLQPQHQHQHQNNLMAVYMPTHTIQQSLPITANPVLDAQYP--DNQMTMSPSSLMGALSD 232
             QPQ            +MP                   YP  D Q  +S SSLMG LSD
Sbjct: 178 P-QPQ-----------AFMP-------------------YPVSDMQAMVSQSSLMGGLSD 206

Query: 233 TQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENER 292
           TQTPGRKRVASG+VVEKTVERRQKRMIKNRESAARSRARKQAYT ELE KVSRLEEENER
Sbjct: 207 TQTPGRKRVASGEVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENER 266

Query: 293 LRRQR-AEVILPCAPPPEPKYQLRRTGSAPF 322
           LR+Q+  E ILP  PPP+PK QLRRT SAPF
Sbjct: 267 LRKQKEVEKILPSVPPPDPKRQLRRTSSAPF 297

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q2|AI5L3_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1

 Score =  258 bits (660), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/304 (51%), Positives = 185/304 (60%), Gaps = 58/304 (19%)

Query: 21  SLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENNFHSEPALSLHRQGSL 80
           SLTRQ SLY+L L E+Q+ LG  GKPLGSMNLDELLK+V              L RQGSL
Sbjct: 15  SLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPPAEE-------GLVRQGSL 67

Query: 81  TLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTSLGEMTLEDFLIKAGAVNESTTPG 140
           TL +DLS KTVDEVW+DI+Q K+ +        +Q +LGE+TLED L++AG V E+  P 
Sbjct: 68  TLPRDLSKKTVDEVWRDIQQDKNGNGTSTTTTHKQPTLGEITLEDLLLRAGVVTETVVPQ 127

Query: 141 QNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQHQNNLMAVYMPTHTIQQ 200
           +N                N++ + QW++Y          HQ Q Q   M           
Sbjct: 128 ENVV--------------NIASNGQWVEYH---------HQPQQQQGFMTY--------- 155

Query: 201 SLPITANPVLDAQYPDNQMTMSPSSLMGALSDT-QTPGRKRVASGDVVEKTVERRQKRMI 259
                  PV + Q     M M     MG LSDT Q PGRKRVA G++VEKTVERRQKRMI
Sbjct: 156 -------PVCEMQ----DMVM-----MGGLSDTPQAPGRKRVA-GEIVEKTVERRQKRMI 198

Query: 260 KNRESAARSRARKQAYTQELENKVSRLEEENERLRR-QRAEVILPCAPPPEPKYQLRRTG 318
           KNRESAARSRARKQAYT ELE KVSRLEEENE+LRR +  E ILP  PPP+PK++LRRT 
Sbjct: 199 KNRESAARSRARKQAYTHELEIKVSRLEEENEKLRRLKEVEKILPSEPPPDPKWKLRRTN 258

Query: 319 SAPF 322
           SA  
Sbjct: 259 SASL 262

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q5|AI5L4_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 190/371 (51%), Gaps = 71/371 (19%)

Query: 22  LTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENN--FHS------EPALS 73
           L RQ SLY+LT DE+QS LG+ GK  GSMN+DELLK++WTAE+   F +       P  S
Sbjct: 23  LARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNIWTAEDTQAFMTTTSSVAAPGPS 82

Query: 74  --------LHRQGSLTLAQDLSNKTVDEVWKDIRQKK-SDDNQENEAQARQTSLGEMTLE 124
                   L RQGSLTL + LS KTVDEVWK +  K+ S+ N   +A  RQ +LGEMTLE
Sbjct: 83  GFVPGGNGLQRQGSLTLPRTLSQKTVDEVWKYLNSKEGSNGNTGTDALERQQTLGEMTLE 142

Query: 125 DFLIKAGAV-------NESTTPG--QNNSGPGLEVDSIATVQQNVS---QHAQWMQYQLP 172
           DFL++AG V       NE+++ G   NN   GLE       Q ++S    ++  +  Q P
Sbjct: 143 DFLLRAGVVKEDNTQQNENSSSGFYANNGAAGLEFGFGQPNQNSISFNGNNSSMIMNQAP 202

Query: 173 SVQLQPQHQHQHQNNLMAVYM--------PTHTIQQSLPITANPV--LDAQYPDNQMTMS 222
            + L+     Q Q       +        PT   +Q+    A PV  ++    +      
Sbjct: 203 GLGLKVGGTMQQQQQPHQQQLQQPHQRLPPTIFPKQANVTFAAPVNMVNRGLFETSADGP 262

Query: 223 PSSLMGALSDTQTP---------------------GRKRVASGDVVEKTVERRQKRMIKN 261
            +S MG    T T                      GR R  S   +EK VERRQKRMIKN
Sbjct: 263 ANSNMGGAGGTVTATSPGTSSAENNTWSSPVPYVFGRGR-RSNTGLEKVVERRQKRMIKN 321

Query: 262 RESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEVI---------LPCAPPPEPKY 312
           RESAARSRARKQAYT ELE ++  L+  N+ L++++AE++             PP   K 
Sbjct: 322 RESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQAEIMKTHNSELKEFSKQPPLLAKR 381

Query: 313 Q-LRRTGSAPF 322
           Q LRRT + P+
Sbjct: 382 QCLRRTLTGPW 392

Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZDF3|TRAB1_ORYSJ bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1

 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 148/290 (51%), Gaps = 48/290 (16%)

Query: 50  MNLDELLKSVWTAENNFHSEPAL--------SLHRQGSLTLAQDLSNKTVDEVWKDIRQK 101
           MN+DELL+S+WTAE +     A          L RQGSLTL + LS KTVDEVW+D+ ++
Sbjct: 1   MNMDELLRSIWTAEESQAMASASAAAAAAEGGLQRQGSLTLPRTLSVKTVDEVWRDLERE 60

Query: 102 KS---------DDNQENEAQARQTSLGEMTLEDFLIKAGAVNEST--------------- 137
            S             E +   RQ +LGEMTLE+FL++AG V E+T               
Sbjct: 61  ASPGAAAADGGGGGGEQQQPRRQPTLGEMTLEEFLVRAGVVRENTAAAAAMVAAAAAPPV 120

Query: 138 ----TPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQHQNNLMAVYM 193
                P  NNS   +   +   V    +  A  M +    +           N LM+   
Sbjct: 121 APRSIPAVNNS--SIFFGNYGGVNDAAAAAAGAMGFSPVGI-----GDPTMGNRLMSGVA 173

Query: 194 PTHTIQQSL-PI-TANPVLDAQYPDNQMTMSPSSLMGALSDTQTPGRKRVASGDVVEKTV 251
                  ++ P+ T+   +D+    +    SP + +    +    GR+  + G+V EK V
Sbjct: 174 GIGGGAITVAPVDTSVGQMDSAGKGDGDLSSPMAPVPYPFEGVIRGRR--SGGNV-EKVV 230

Query: 252 ERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEVI 301
           ERRQ+RMIKNRESAARSRARKQAYT ELE +V +L+E+N  L++++ E++
Sbjct: 231 ERRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNMELQKKQEEIM 280

Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FMM7|AI5L8_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 8 OS=Arabidopsis thaliana GN=BZIP15 PE=2 SV=1

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 178/385 (46%), Gaps = 95/385 (24%)

Query: 11  DAAAQAKNML-------SLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAE 63
           D+  + KN++       SL+RQGS+Y+ T+D+ Q+ LG      GSMN+DEL+K + +AE
Sbjct: 2   DSYWRLKNLVNDLPVSTSLSRQGSIYSWTVDQFQTSLG---LDCGSMNMDELVKHISSAE 58

Query: 64  NNFHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQEN-----EAQARQTSL 118
                E      RQGS TL   LS + V EVWK I ++K  +N          Q +QT L
Sbjct: 59  -----ETQEGSQRQGSTTLPPTLSKQNVGEVWKSITEEKHTNNNGGVTNITHLQGQQT-L 112

Query: 119 GEMTLEDFLIKAGAVNESTTPGQN-----------NSGPGLEVDSIATVQQNVSQHAQWM 167
           GE+TLE+F I+AGA   +T  G             ++  G+++   A V       + +M
Sbjct: 113 GEITLEEFFIRAGARGGNTNGGSIHDSSSSISGNPHTSLGVQIQPKAMV-------SDFM 165

Query: 168 QYQLPSVQLQPQHQHQHQNNLMAVYMPTHTI-----------------------QQSL-- 202
              +P  +    + HQ+ N  M+ Y P  +I                        QSL  
Sbjct: 166 NNMVP--RSHDSYLHQNVNGSMSTYQPQQSIMSMPNGYSYGKQIRFSNGSLGSGNQSLQD 223

Query: 203 --------------------PITANPVLDAQYPDNQMT--MSPSSLMGALSDTQTPGRKR 240
                               P+T  P L+ +   N  +  +SPS  +   S T T G K 
Sbjct: 224 TKRSLVPSVATIPSEAITCSPVTPFPTLNGKQKINGESSLLSPSPYISNGS-TSTRGGKI 282

Query: 241 VASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEV 300
            +     ++ V+++ +R IKNRESAARSRARKQA T E+E ++  L+++ E L +Q  E+
Sbjct: 283 NSEITAEKQFVDKKLRRKIKNRESAARSRARKQAQTMEVEVELENLKKDYEELLKQHVEL 342

Query: 301 ILPCAPP------PEPKYQLRRTGS 319
                 P        P+ +LRRT S
Sbjct: 343 RKRQMEPGMISLHERPERKLRRTKS 367

Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q2|AI5L7_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1

 Score =  111 bits (278), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 82/143 (57%), Gaps = 26/143 (18%)

Query: 19  MLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAEN----NFHSEPALS- 73
           ++ L RQ S+Y+LT DE+Q+ LG  GK  GSMN+DELLKS+WTAE        S PA + 
Sbjct: 31  VMPLARQSSVYSLTFDELQNTLGGPGKDFGSMNMDELLKSIWTAEEAQAMAMTSAPAATA 90

Query: 74  --------------LHRQGSLTLAQDLSNKTVDEVWKDIRQKKSD-------DNQENEAQ 112
                         L RQGSLTL + +S KTVDEVWK +  K  +         + N   
Sbjct: 91  VAQPGAGIPPPGGNLQRQGSLTLPRTISQKTVDEVWKCLITKDGNMEGSSGGGGESNVPP 150

Query: 113 ARQTSLGEMTLEDFLIKAGAVNE 135
            RQ +LGEMTLE+FL +AG V E
Sbjct: 151 GRQQTLGEMTLEEFLFRAGVVRE 173

Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RYD6|AI5L1_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1

 Score =  107 bits (268), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 159/305 (52%), Gaps = 59/305 (19%)

Query: 22  LTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWT----------AENNFHSEPA 71
           + RQ S+ +LTLDEIQ +    GK  G+MN+DE L ++WT            +N   +PA
Sbjct: 35  VGRQNSILSLTLDEIQMK---SGKSFGAMNMDEFLANLWTTVEENDNEGGGAHNDGEKPA 91

Query: 72  LSLHRQGSLTLAQDLSNKTVDEVWKDIRQK-----KSDDNQENEAQA--RQTSLGEMTLE 124
           + L RQGSL+L   L  KTVDEVW +I+        S ++ +N A+   RQ +LGE+TLE
Sbjct: 92  V-LPRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLE 150

Query: 125 DFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQH 184
           DFL+KAG V E                   T++ + S      ++    V L  Q+Q+ +
Sbjct: 151 DFLVKAGVVQEPLK---------------TTMRMSSSDFGYNPEF---GVGLHCQNQNNY 192

Query: 185 QNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGALSDTQTPGRKRVASG 244
            +N  +VY         L  +++ +      +  +T   +  +          +KR+  G
Sbjct: 193 GDN-RSVYSENRPFYSVLGESSSCMTGNGRSNQYLTGLDAFRI----------KKRIIDG 241

Query: 245 DVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERL--------RRQ 296
              E  +ERRQ+RMIKNRESAARSRAR+QAYT ELE +++ L EEN +L        +++
Sbjct: 242 P-PEILMERRQRRMIKNRESAARSRARRQAYTVELELELNNLTEENTKLKEIVEENEKKR 300

Query: 297 RAEVI 301
           R E+I
Sbjct: 301 RQEII 305

Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q4|AI5L5_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1

 Score =  104 bits (260), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 79/136 (58%), Gaps = 25/136 (18%)

Query: 22  LTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENN-----------FHSEP 70
           LTRQGS+Y+LT DE QS +G   K  GSMN+DELLK++W+AE                + 
Sbjct: 21  LTRQGSIYSLTFDEFQSSVG---KDFGSMNMDELLKNIWSAEETQAMASGVVPVLGGGQE 77

Query: 71  ALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDD-----------NQENEAQARQTSLG 119
            L L RQGSLTL + LS KTVD+VWKD+ +  S              Q      RQ +LG
Sbjct: 78  GLQLQRQGSLTLPRTLSQKTVDQVWKDLSKVGSSGVGGSNLSQVAQAQSQSQSQRQQTLG 137

Query: 120 EMTLEDFLIKAGAVNE 135
           E+TLE+FL++AG V E
Sbjct: 138 EVTLEEFLVRAGVVRE 153

Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1

 Score = 92.8 bits (229), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 79/186 (42%), Gaps = 69/186 (37%)

Query: 19  MLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAEN------------NF 66
             SL RQ S+Y+LTLDE Q  L + GK  GSMN+DE L S+W AE               
Sbjct: 34  FTSLGRQSSIYSLTLDEFQHALCENGKNFGSMNMDEFLVSIWNAEENNNNQQQAAAAAGS 93

Query: 67  HSEPAL---------------------------------------SLHRQGSLTLAQDLS 87
           HS PA                                        SL RQGSLTL   L 
Sbjct: 94  HSVPANHNGFNNNNNNGGEGGVGVFSGGSRGNEDANNKRGIANESSLPRQGSLTLPAPLC 153

Query: 88  NKTVDEVWKDIRQKKSD----------------DNQEN--EAQARQTSLGEMTLEDFLIK 129
            KTVDEVW +I +                    +N +N  E  ARQ + GEMTLEDFL+K
Sbjct: 154 RKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGGETAARQPTFGEMTLEDFLVK 213

Query: 130 AGAVNE 135
           AG V E
Sbjct: 214 AGVVRE 219

Participates in ABA-regulated gene expression during seed development and subsequent vegetative stage by acting as the major mediator of ABA repression of growth. Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 and Em6 genes promoters. Can also trans-activate its own promoter, suggesting that it is autoregulated. Plays a role in sugar-mediated senescence.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q3|AI5L6_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 83/169 (49%), Gaps = 51/169 (30%)

Query: 20  LSLTRQGSLYNLTLDEIQSQLGDR-GKPLGSMNLDELLKSVWTAE--------------- 63
           L LTRQ S+++LT DE Q+  G   GK  GSMN+DELLK++WTAE               
Sbjct: 25  LPLTRQNSVFSLTFDEFQNSWGGGIGKDFGSMNMDELLKNIWTAEESHSMMGNNTSYTNI 84

Query: 64  NNFHSEPAL--------------------------SLHRQGSLTLAQDLSNKTVDEVWKD 97
           +N +S   +                          SL RQGSLTL + +S K VD+VWK+
Sbjct: 85  SNGNSGNTVINGGGNNIGGLAVGVGGESGGFFTGGSLQRQGSLTLPRTISQKRVDDVWKE 144

Query: 98  IRQKKSDDNQENEAQA-------RQTSLGEMTLEDFLIKAGAVNESTTP 139
           +   K DD               RQ +LGEMTLE+FL++AG V E   P
Sbjct: 145 L--MKEDDIGNGVVNGGTSGIPQRQQTLGEMTLEEFLVRAGVVREEPQP 191

Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
302398623	322	BZIP domain class transcription factor [	0.959	0.959	0.576	5e-92
356526358	323	PREDICTED: transcription factor bZIP70 [	0.959	0.956	0.583	1e-90
118483091	322	unknown [Populus trichocarpa]	0.953	0.953	0.560	1e-89
356571845	320	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.937	0.943	0.597	1e-88
375298530	256	putative basic leucine-zipper transcript	0.773	0.972	0.670	4e-88
224100543	317	predicted protein [Populus trichocarpa]	0.937	0.952	0.560	1e-87
449446331	321	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.953	0.956	0.577	1e-87
59896064	322	bZIP transcription factor [Malus x domes	0.953	0.953	0.560	2e-87
356503044	316	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.931	0.949	0.591	6e-86
225463745	325	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.894	0.886	0.581	4e-84

>gi|302398623|gb|ADL36606.1| BZIP domain class transcription factor [Malus x domestica]

 Score =  343 bits (881), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 193/335 (57%), Positives = 230/335 (68%), Gaps = 26/335 (7%)

Query: 1   MGTQTMGSEGDAAAQAKN--MLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKS 58
           MG QTMGS+G A    K      L RQ S+Y+LTLDE+Q+QLGD GKPL SMNLDELLK+
Sbjct: 1   MGIQTMGSQGGADGNCKQPQFQPLGRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKN 60

Query: 59  VWTAENNFHSEPALS---------LHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQEN 109
           VW+ E N      +          L RQ SL+L   LS KTVDEVW+DI+Q K  D +E 
Sbjct: 61  VWSVEANQTMGIDIEGTTLVNQAQLQRQASLSLTSALSKKTVDEVWRDIQQSK--DEEEK 118

Query: 110 EAQARQTSLGEMTLEDFLIKAGAVNES-TTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQ 168
           ++Q RQ +LGEMTLEDFL+KAG V E+  +  +  +GP + VD+    Q       QWMQ
Sbjct: 119 KSQERQRTLGEMTLEDFLVKAGVVAEAEASSDKQCAGPLVGVDANVAAQ---FPQGQWMQ 175

Query: 169 YQLPSVQLQPQHQHQHQNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMG 228
           Y       QPQ+QH  Q+ +M VYMP+  I   + + A  +++  YPDNQ+ + PS LMG
Sbjct: 176 YS------QPQYQHPQQS-MMGVYMPSQPIPPPMHVGAGAMMEVPYPDNQVPL-PSPLMG 227

Query: 229 ALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEE 288
           ALSDT TPGRKR    D+VEKTVERRQKRMIKNRESAARSRARKQAYT ELENKVSRLEE
Sbjct: 228 ALSDTPTPGRKRGNPEDIVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEE 287

Query: 289 ENERLRRQRA-EVILPCAPPPEPKYQLRRTGSAPF 322
           ENERLR+Q+  E +LP APPPEPKYQLRRT SAP 
Sbjct: 288 ENERLRKQKELEKVLPSAPPPEPKYQLRRTSSAPL 322

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526358|ref|XP_003531785.1| PREDICTED: transcription factor bZIP70 [Glycine max]

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 196/336 (58%), Positives = 233/336 (69%), Gaps = 27/336 (8%)

Query: 1   MGTQTMGSEG---DAAAQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLK 57
           MGTQTMG+ G   D+  +   +  L RQ S+Y+LTLDE+Q+QLGD GKPL SMN+DELLK
Sbjct: 1   MGTQTMGTHGGGGDSNGKQSPLQPLVRQNSMYSLTLDEVQNQLGDLGKPLTSMNIDELLK 60

Query: 58  SVWTAE-------NNFHSEPA--LSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQE 108
           +VWTAE       +N  +  A   SL RQ SL+L   LS KTVDEVW+DI+Q K     E
Sbjct: 61  NVWTAEASQTIGMDNEGTAQASQASLQRQASLSLTGALSKKTVDEVWRDIQQNKIVG--E 118

Query: 109 NEAQARQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQ 168
            + Q R  +LGEMTLEDFL+KAG V  +++  + N+     VDS   V Q  SQ AQW+Q
Sbjct: 119 KKFQDRHPTLGEMTLEDFLVKAGVVAGASS-NRTNTSTIAGVDSNVAVPQFPSQ-AQWIQ 176

Query: 169 YQLPSVQLQPQHQHQHQ-NNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLM 227
           Y        PQ Q+QH   +LM +YMP+  + Q L + A   LD  + DNQM M PSSLM
Sbjct: 177 Y--------PQAQYQHPPQSLMGMYMPSQGMVQPLHMGAGASLDVSFADNQMAM-PSSLM 227

Query: 228 GALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLE 287
           G +SDTQTPGRK+  S D++EKTVERRQKRMIKNRESAARSRARKQAYT ELENKVSRLE
Sbjct: 228 GTMSDTQTPGRKKSTSEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLE 287

Query: 288 EENERLR-RQRAEVILPCAPPPEPKYQLRRTGSAPF 322
           EENERLR R+  E +L CAPPPEPKYQLRR  SAPF
Sbjct: 288 EENERLRKRKELEQMLSCAPPPEPKYQLRRIASAPF 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483091|gb|ABK93455.1| unknown [Populus trichocarpa]

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/337 (56%), Positives = 231/337 (68%), Gaps = 30/337 (8%)

Query: 1   MGTQTMGSEGDAAAQAKN--MLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKS 58
           MG QTMGS+GD ++  K      L RQ S+Y+LTLD++Q+QLGD GKPL SMNLDELLK+
Sbjct: 1   MGMQTMGSQGDGSSHHKQSQFQPLVRQNSMYSLTLDKVQNQLGDLGKPLSSMNLDELLKN 60

Query: 59  VWTAENN-----------FHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQ 107
           VWT E N           F ++ AL    Q S++L   LS KTVDEVWKDI+Q K D   
Sbjct: 61  VWTVEANRTMGLEVEGIPFANQTAL--QHQASISLTSALSKKTVDEVWKDIQQSKHDG-- 116

Query: 108 ENEAQARQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWM 167
           E +++ RQ +LGEMTLEDFL+KAG V E++   + + G  + VD+ A   Q   Q +QW+
Sbjct: 117 EMKSRERQPTLGEMTLEDFLVKAGVVAEASV-DKKDGGSVVTVDTHAA--QQFLQQSQWV 173

Query: 168 QYQLPSVQLQPQHQHQH-QNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSL 226
           QY        P  Q+ H Q ++M VYMP   + Q L + A  ++D  YP+NQ+T+ P  L
Sbjct: 174 QYP-------PHPQYHHPQQSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVTLPPP-L 225

Query: 227 MGALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRL 286
           MG LSDTQTP RKR    D++ KTVERRQKRMIKNRESAARSRARKQAYT ELENKVSRL
Sbjct: 226 MGTLSDTQTPARKRGVPEDMIGKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRL 285

Query: 287 EEENERLRRQRA-EVILPCAPPPEPKYQLRRTGSAPF 322
           EEENERLR++R  E +LPC P PEPKYQLRRT SAPF
Sbjct: 286 EEENERLRKRRELENMLPCVPLPEPKYQLRRTASAPF 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571845|ref|XP_003554082.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Glycine max]

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 200/335 (59%), Positives = 229/335 (68%), Gaps = 33/335 (9%)

Query: 6   MGSEGDAAA-QAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAEN 64
           MGS+G     Q     SLTRQGSLYNLTLDE+Q+QLG+ GKPLGSMNLDELLKSVWTAE+
Sbjct: 1   MGSQGGTTQDQEPKTGSLTRQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWTAES 60

Query: 65  NFHS---------EPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQ 115
              +             SL+ QGSLTL+ +LS KT+DEVW+D++Q KS        + RQ
Sbjct: 61  GTDAYMQHGGQVASAGSSLNPQGSLTLSGNLSKKTIDEVWRDMQQNKS------VGKERQ 114

Query: 116 TSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQ 175
            +LGEMTLEDFL+KAG   E   P ++ +     VDS    Q N SQHA WMQYQL SVQ
Sbjct: 115 PTLGEMTLEDFLVKAGVATEPF-PNEDGAMAMSGVDS----QHNTSQHAHWMQYQLTSVQ 169

Query: 176 LQPQHQHQHQNNL-------MAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMG 228
            QPQ Q     N         + +M  H +QQ +PI  N VLDA Y +      PSSLMG
Sbjct: 170 QQPQQQQHQHQNQQNSVMLGFSGFMTGHAVQQPIPIVVNTVLDAGYSE----ALPSSLMG 225

Query: 229 ALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEE 288
           ALSD+QT GRKR ASG+VVEK VERRQKRMIKNRESAARSRARKQAYTQELE KVS+LEE
Sbjct: 226 ALSDSQTAGRKRDASGNVVEKIVERRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEE 285

Query: 289 ENERLRRQ-RAEVILPCAPPPEPKYQLRRTGSAPF 322
           ENERLRRQ   E  LP APPP+PK+QLRRT SAP 
Sbjct: 286 ENERLRRQNEIERALPSAPPPDPKHQLRRTSSAPL 320

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|375298530|dbj|BAL61092.1| putative basic leucine-zipper transcription factor fragment, partial [Diospyros kaki]

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/252 (67%), Positives = 194/252 (76%), Gaps = 3/252 (1%)

Query: 73  SLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTSLGEMTLEDFLIKAGA 132
           SLHRQ S+ L+ DLS KTVDEVW+DI+Q +   + + +AQ RQ +LGEMTLEDFL+KAG 
Sbjct: 6   SLHRQPSVALSGDLSKKTVDEVWQDIQQGQKKSSHDKKAQERQPTLGEMTLEDFLVKAGV 65

Query: 133 VNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQHQ-NNLMAV 191
           V ES+ P + N GP L  D I   QQN+   AQWM YQLPS+    Q Q      N+MAV
Sbjct: 66  VAESS-PRKKNPGPVLGGDPIGLAQQNMPPQAQWMHYQLPSIHQPAQQQQHQHQRNMMAV 124

Query: 192 YMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGALSDTQTPGRKRVASGDVVEKTV 251
           YMP H +QQ LPI ANP++D  Y + QMTMSPS+LM  LSDTQTPGRKRVA GDV+EKTV
Sbjct: 125 YMPAHPVQQHLPIGANPIMDVSYQEPQMTMSPSTLMDTLSDTQTPGRKRVAPGDVIEKTV 184

Query: 252 ERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRA-EVILPCAPPPEP 310
           ERRQKRMIKNRESAARSRARKQAYT ELENKVSRLEEENE+L+RQ+A E  LP  PPPEP
Sbjct: 185 ERRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENEKLKRQKAVEKALPSVPPPEP 244

Query: 311 KYQLRRTGSAPF 322
           KYQLRRT S+PF
Sbjct: 245 KYQLRRTSSSPF 256

Source: Diospyros kaki

Species: Diospyros kaki

Genus: Diospyros

Family: Ebenaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100543|ref|XP_002311917.1| predicted protein [Populus trichocarpa] gi|222851737|gb|EEE89284.1| predicted protein [Populus trichocarpa]

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 186/332 (56%), Positives = 227/332 (68%), Gaps = 30/332 (9%)

Query: 6   MGSEGDAAAQAKN--MLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAE 63
           MGS+GD ++  K      L RQ S+Y+LTLDE+Q+QLGD GKPL SMNLDELLK+VWT E
Sbjct: 1   MGSQGDGSSHHKQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVE 60

Query: 64  NN-----------FHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQ 112
            N           F ++ AL    Q S++L   LS KTVDEVWKDI+Q K D   E +++
Sbjct: 61  ANRTMGLEVEGIPFANQTAL--QHQASISLTSALSKKTVDEVWKDIQQSKHDG--EMKSR 116

Query: 113 ARQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLP 172
            RQ +LGEMTLEDFL+KAG V E++   + + G  + VD+ A   Q   Q +QW+QY   
Sbjct: 117 ERQPTLGEMTLEDFLVKAGVVAEASV-DKKDGGSVVTVDTHAA--QQFLQQSQWVQYP-- 171

Query: 173 SVQLQPQHQHQH-QNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGALS 231
                P  Q+ H Q ++M VYMP   + Q L + A  ++D  YP+NQ+T+ P  LMG LS
Sbjct: 172 -----PHPQYHHPQQSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVTLPPP-LMGTLS 225

Query: 232 DTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENE 291
           DTQTP RKR    D++ KTVERRQKRMIKNRESAARSRARKQAYT ELENKVSRLEEENE
Sbjct: 226 DTQTPARKRGVPEDMIGKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENE 285

Query: 292 RLRRQRA-EVILPCAPPPEPKYQLRRTGSAPF 322
           RLR++R  E +LPC P PEPKYQLRRT SAPF
Sbjct: 286 RLRKRRELENMLPCVPLPEPKYQLRRTASAPF 317

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446331|ref|XP_004140925.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus] gi|449529052|ref|XP_004171515.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus]

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 194/336 (57%), Positives = 227/336 (67%), Gaps = 29/336 (8%)

Query: 1   MGTQTMGSE--GDAAAQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKS 58
           MG QTMGS+  GD   +      L RQ SLY+LTLDE+Q+QLGD GKPL SMNLDELLK+
Sbjct: 1   MGIQTMGSQAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKN 60

Query: 59  VWTAE-----------NNFHSEPALSLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQ 107
           VWTAE           NN  +    SL RQ SL+L   LS KTVDEVW+DI+Q K  D++
Sbjct: 61  VWTAEANQTVGKDNEDNNILANQT-SLQRQASLSLNGALSKKTVDEVWRDIQQSK--DSE 117

Query: 108 ENEAQARQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWM 167
           E +++ RQ +LGEMTLEDFL+KAG V E T+  +  +GP +E+D+  T Q    Q  QWM
Sbjct: 118 EKKSRERQPTLGEMTLEDFLVKAGVVAE-TSSNKKGAGPVVEIDANITPQ---FQQTQWM 173

Query: 168 QYQLPSVQLQPQHQHQHQNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLM 227
           QY               Q  +M VYM    I Q L +    V+D  Y DNQ+T+ P+ LM
Sbjct: 174 QYPQ-------PQYQSQQAAMMGVYMSGQPIPQPLHVGGGAVMDVPYVDNQLTL-PTPLM 225

Query: 228 GALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLE 287
           GALSDTQ  GRKR A  D++EKTVERRQKRMIKNRESAARSRARKQAYT ELENKVSRLE
Sbjct: 226 GALSDTQASGRKRGAPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLE 285

Query: 288 EENERLR-RQRAEVILPCAPPPEPKYQLRRTGSAPF 322
           EENERLR R+  E +LP AP PEPKYQLRRT SAPF
Sbjct: 286 EENERLRKRKELEKMLPLAPSPEPKYQLRRTSSAPF 321

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|59896064|gb|AAX11392.1| bZIP transcription factor [Malus x domestica]

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 189/337 (56%), Positives = 223/337 (66%), Gaps = 30/337 (8%)

Query: 1   MGTQTMGSEGDAAAQAKN--MLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKS 58
           MG  TMGS+G A    K      L RQ S+Y+LTLDE+Q+QLGD GKPL SMNLDELLK+
Sbjct: 1   MGIPTMGSQGGADGNCKQSQFQPLARQNSIYSLTLDEVQNQLGDLGKPLSSMNLDELLKN 60

Query: 59  VWTAENN------FHSEPALS---LHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQEN 109
           VW+AE N            ++   L RQ SL+L   LS KTVDEVWKDI+Q K  D +E 
Sbjct: 61  VWSAEANQIMGIDIEGNTLVNQAQLQRQASLSLTSALSKKTVDEVWKDIQQSK--DEEEK 118

Query: 110 EAQARQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQH---AQW 166
           ++Q RQ +LGEMTLEDFL+KAG V E+              D +  V  NV+      QW
Sbjct: 119 KSQERQRTLGEMTLEDFLVKAGVVAEAEASSDKKYA-----DPLVGVDANVAAQLPQGQW 173

Query: 167 MQYQLPSVQLQPQHQHQHQNNLMAVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSL 226
           MQY               Q ++M VYMP+  +Q  + + A  +++  YPDNQ+ + PS L
Sbjct: 174 MQYPQ-------PQYQHPQQSMMGVYMPSQPLQPPMHVGAGAMMEVPYPDNQVAV-PSPL 225

Query: 227 MGALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRL 286
           MG LSDTQTPGRKR    D+VEKTVERRQKRMIKNRESAARSRARKQAYT ELENKVSRL
Sbjct: 226 MGTLSDTQTPGRKRGNPEDIVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRL 285

Query: 287 EEENERLRRQRA-EVILPCAPPPEPKYQLRRTGSAPF 322
           EEENERLR+Q+  E +LP APPPEPKYQLRRT SAPF
Sbjct: 286 EEENERLRKQKEQEKVLPSAPPPEPKYQLRRTTSAPF 322

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503044|ref|XP_003520322.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Glycine max]

 Score =  323 bits (828), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 197/333 (59%), Positives = 230/333 (69%), Gaps = 33/333 (9%)

Query: 6   MGSEGDAAA-QAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAEN 64
           MGS+  A   Q     SLTRQGSLYNLTLDE+Q+QLG+ GKP+GSMNLDELLKSVWT E+
Sbjct: 1   MGSQSGATQDQEPKTGSLTRQGSLYNLTLDEVQNQLGNLGKPVGSMNLDELLKSVWTVES 60

Query: 65  NFHS----------EPALSLH-RQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQA 113
              +              SL+  QGSLTL+ DLS KT+DEVW+D++Q KS        + 
Sbjct: 61  GTDAYMHHGGGQVVSAGSSLNPEQGSLTLSGDLSKKTIDEVWRDMQQNKS------VGKE 114

Query: 114 RQTSLGEMTLEDFLIKAGAVNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPS 173
           RQ +LGEMTLEDFL+KAG    ST P  N  G  + +  + + Q N  QHA WMQYQL S
Sbjct: 115 RQPTLGEMTLEDFLVKAGV---STEPFPNEDG-AMAMSGVDS-QHNTLQHAHWMQYQLTS 169

Query: 174 VQLQPQHQHQHQNNLM---AVYMPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGAL 230
           VQ Q   Q Q QN++M   + +M  H +QQ +P+  N V DA Y +      PSSLM AL
Sbjct: 170 VQQQ--QQPQQQNSVMPGFSGFMAGHVVQQPIPVVLNTVRDAGYSE----ALPSSLMAAL 223

Query: 231 SDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEEN 290
           SD+QT GRKRVASG+VVEKTVERRQKRMIKNRESAARSRARKQAYTQELE KVS+LEEEN
Sbjct: 224 SDSQTAGRKRVASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEEN 283

Query: 291 ERLRRQ-RAEVILPCAPPPEPKYQLRRTGSAPF 322
           ERLRRQ   E  LP AP P+PK+QLRRT SAP 
Sbjct: 284 ERLRRQNEIERALPSAPSPDPKHQLRRTSSAPL 316

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463745|ref|XP_002265747.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like isoform 1 [Vitis vinifera]

 Score =  317 bits (813), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 181/311 (58%), Positives = 216/311 (69%), Gaps = 23/311 (7%)

Query: 22  LTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENN----FHSEPA-----L 72
           L RQ S+Y+LTLDE+Q+QLGD GKPL SMNLDELLK+VWT E N      +E A      
Sbjct: 28  LARQNSMYSLTLDEVQNQLGDLGKPLTSMNLDELLKNVWTVEANNSVGMDAEGAGLSNQS 87

Query: 73  SLHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTSLGEMTLEDFLIKAGA 132
           +L R+ SL+L   LS KTVDEVW+DI Q    +++E +++ RQ +LGEMTLEDFL+KAG 
Sbjct: 88  ALQREPSLSLTGALSKKTVDEVWRDI-QGHGKNSEEKKSRERQPTLGEMTLEDFLVKAGV 146

Query: 133 VNESTTPGQNNSGPGLEVDSIATVQQNVSQHAQWMQYQLPSVQLQPQHQHQHQNNLMAVY 192
           V E +   +  +G  + VD    V     Q  QWMQY               Q N++ VY
Sbjct: 147 VAEPSD--KKIAGTVIGVD--PNVGPQFPQQGQWMQYPQ-------PQFPHPQQNMIGVY 195

Query: 193 MPTHTIQQSLPITANPVLDAQYPDNQMTMSPSSLMGALSDTQTPGRKRVASGDVVEKTVE 252
           MP   + Q LP+  + V+D  YPDNQ+ +S S LMGALSDTQ PGRKRV+  D++EKTVE
Sbjct: 196 MPGQPMPQPLPMGPSSVMDVTYPDNQVALS-SPLMGALSDTQAPGRKRVSQEDMIEKTVE 254

Query: 253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLR-RQRAEVILPCAPPPEPK 311
           RRQKRMIKNRESAARSRARKQAYT ELENKVSRLEEENERLR R+  E +LP APPPEPK
Sbjct: 255 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPSAPPPEPK 314

Query: 312 YQLRRTGSAPF 322
           YQLRRT SAPF
Sbjct: 315 YQLRRTSSAPF 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
TAIR|locus:2103665	297	AREB3 "ABA-responsive element	0.5	0.542	0.534	2.3e-72
TAIR|locus:2063275	262	EEL "AT2G41070" [Arabidopsis t	0.416	0.511	0.5	3.8e-56
TAIR|locus:2118969	454	ABF3 "AT4G34000" [Arabidopsis	0.270	0.191	0.478	4.1e-34
TAIR|locus:2076018	331	DPBF2 "AT3G44460" [Arabidopsis	0.372	0.362	0.447	8.8e-32
TAIR|locus:2159986	370	AT5G42910 "AT5G42910" [Arabido	0.344	0.3	0.44	6.5e-29
UNIPROTKB|Q8RZ35	388	P0489B03.11 "Putative ABA resp	0.214	0.177	0.520	2.8e-28
UNIPROTKB|Q6ZDF3	318	TRAB1 "bZIP transcription fact	0.273	0.276	0.466	3.4e-28
TAIR|locus:2049425	442	ABI5 "ABA INSENSITIVE 5" [Arab	0.145	0.106	0.770	3.4e-21
TAIR|locus:2024224	270	GBF4 "G-box binding factor 4"	0.164	0.196	0.528	2.2e-09
TAIR|locus:2172507	315	AT5G44080 [Arabidopsis thalian	0.136	0.139	0.568	1.5e-08

TAIR|locus:2103665 AREB3 "ABA-responsive element binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.3e-72, Sum P(2) = 2.3e-72
 Identities = 93/174 (53%), Positives = 115/174 (66%)

Query:     6 MGSEGDAAAQAKNMLSLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENN 65
             M S+     QAK+  SL RQ SLY+LTLDE+Q+ LG  GK LGSMNLDELLKSV + E N
Sbjct:     1 MDSQRGIVEQAKSQ-SLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEAN 59

Query:    66 FHSEPALS--------LHRQGSLTLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTS 117
               S  A++        L RQGSLTL +DLS KTVDEVWKDI+Q K+  +  +E + +Q +
Sbjct:    60 QPSSMAVNGGAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSA-HERRDKQPT 118

Query:   118 LGEMTLEDFLIKAGAVNESTTPGQNNSGP--GLEVDSIATVQQNVSQHAQWMQY 169
             LGEMTLED L+KAG V E T PG N+ GP  G    S A + QN++Q   W+QY
Sbjct:   119 LGEMTLEDLLLKAGVVTE-TIPGSNHDGPVGGGSAGSGAGLGQNITQVGPWIQY 171

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2063275 EEL "AT2G41070" [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
 Identities = 74/148 (50%), Positives = 92/148 (62%)

Query:    21 SLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENNFHSEPALSLHRQGSL 80
             SLTRQ SLY+L L E+Q+ LG  GKPLGSMNLDELLK+V              L RQGSL
Sbjct:    15 SLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPPAEE-------GLVRQGSL 67

Query:    81 TLAQDLSNKTVDEVWKDIRQKKSDDNQENEAQARQTSLGEMTLEDFLIKAGAVNESTTPG 140
             TL +DLS KTVDEVW+DI+Q K+ +        +Q +LGE+TLED L++AG V E+  P 
Sbjct:    68 TLPRDLSKKTVDEVWRDIQQDKNGNGTSTTTTHKQPTLGEITLEDLLLRAGVVTETVVPQ 127

Query:   141 QNNSGPGLEVDSIATVQQNVSQHAQWMQ 168
             +N       V +IA+  Q V  H Q  Q
Sbjct:   128 EN-------VVNIASNGQWVEYHHQPQQ 148

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

TAIR|locus:2118969 ABF3 "AT4G34000" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 4.1e-34, Sum P(3) = 4.1e-34
 Identities = 45/94 (47%), Positives = 62/94 (65%)

Query:   196 HTIQQSLPITANPVLDAQYPDNQMT--MSPSSLMGALSDTQTP---GRKRVASGDVVEKT 250
             + + Q++       + A  P +QM+  ++P S + A S +  P   GR R  +G V+EK 
Sbjct:   314 NNLLQAVDFKTGVTVAAVSPGSQMSPDLTPKSALDA-SLSPVPYMFGRVR-KTGAVLEKV 371

Query:   251 VERRQKRMIKNRESAARSRARKQAYTQELENKVS 284
             +ERRQKRMIKNRESAARSRARKQAYT ELE +++
Sbjct:   372 IERRQKRMIKNRESAARSRARKQAYTMELEAEIA 405

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

TAIR|locus:2076018 DPBF2 "AT3G44460" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
 Identities = 64/143 (44%), Positives = 87/143 (60%)

Query:    24 RQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTA--ENN-----FHSE---PALS 73
             RQ S+ +LTLDEIQ +    GK  G+MN+DE L ++WT   EN+      H++   PA+ 
Sbjct:    37 RQNSILSLTLDEIQMK---SGKSFGAMNMDEFLANLWTTVEENDNEGGGAHNDGEKPAV- 92

Query:    74 LHRQGSLTLAQDLSNKTVDEVWKDIRQ-----KKSDDNQENEAQ--ARQTSLGEMTLEDF 126
             L RQGSL+L   L  KTVDEVW +I+        S ++ +N A+   RQ +LGE+TLEDF
Sbjct:    93 LPRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDF 152

Query:   127 LIKAGAVNE--STTPGQNNSGPG 147
             L+KAG V E   TT   ++S  G
Sbjct:   153 LVKAGVVQEPLKTTMRMSSSDFG 175

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0033613 "activating transcription factor binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2159986 AT5G42910 "AT5G42910" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 6.5e-29, Sum P(2) = 6.5e-29
 Identities = 55/125 (44%), Positives = 74/125 (59%)

Query:    21 SLTRQGSLYNLTLDEIQSQLGDRGKPLGSMNLDELLKSVWTAENNFHSEPALSLHRQGSL 80
             SL+RQGS+Y+ T+D+ Q+ LG      GSMN+DEL+K + +AE     E      RQGS 
Sbjct:    19 SLSRQGSIYSWTVDQFQTSLG---LDCGSMNMDELVKHISSAE-----ETQEGSQRQGST 70

Query:    81 TLAQDLSNKTVDEVWKDIRQKKSDDNQEN-----EAQARQTSLGEMTLEDFLIKAGAVNE 135
             TL   LS + V EVWK I ++K  +N          Q +QT LGE+TLE+F I+AGA   
Sbjct:    71 TLPPTLSKQNVGEVWKSITEEKHTNNNGGVTNITHLQGQQT-LGEITLEEFFIRAGARGG 129

Query:   136 STTPG 140
             +T  G
Sbjct:   130 NTNGG 134

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

UNIPROTKB|Q8RZ35 P0489B03.11 "Putative ABA response element binding factor" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 158 (60.7 bits), Expect = 2.8e-28, Sum P(3) = 2.8e-28
 Identities = 38/73 (52%), Positives = 48/73 (65%)

Query:   216 DNQMTMSPSSLMGALSD---TQTPGRKRVASGD-VVEKTVERRQKRMIKNRESAARSRAR 271
             D    M+ + +M  + +    +   RKR    D   EKTVERRQ+RMIKNRESAARSRAR
Sbjct:   263 DGMSAMTHADMMNCIGNGMMIENGTRKRPHREDGCAEKTVERRQRRMIKNRESAARSRAR 322

Query:   272 KQAYTQELENKVS 284
             KQAYT ELE +++
Sbjct:   323 KQAYTVELEAELN 335

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

UNIPROTKB|Q6ZDF3 TRAB1 "bZIP transcription factor TRAB1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 198 (74.8 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
 Identities = 49/105 (46%), Positives = 65/105 (61%)

Query:    50 MNLDELLKSVWTAENN--FHSEPALS------LHRQGSLTLAQDLSNKTVDEVWKDIRQK 101
             MN+DELL+S+WTAE +    S  A +      L RQGSLTL + LS KTVDEVW+D+ ++
Sbjct:     1 MNMDELLRSIWTAEESQAMASASAAAAAAEGGLQRQGSLTLPRTLSVKTVDEVWRDLERE 60

Query:   102 KSDD---------NQENEAQARQTSLGEMTLEDFLIKAGAVNEST 137
              S             E +   RQ +LGEMTLE+FL++AG V E+T
Sbjct:    61 ASPGAAAADGGGGGGEQQQPRRQPTLGEMTLEEFLVRAGVVRENT 105

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2049425 ABI5 "ABA INSENSITIVE 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
 Identities = 37/48 (77%), Positives = 41/48 (85%)

Query:   237 GRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVS 284
             GRKRV  G V EK VERRQ+RMIKNRESAARSRARKQAYT ELE +++
Sbjct:   342 GRKRVVDGPV-EKVVERRQRRMIKNRESAARSRARKQAYTVELEAELN 388

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048316 "seed development" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010200 "response to chitin" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IEP;RCA

GO:0010187 "negative regulation of seed germination" evidence=IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2024224 GBF4 "G-box binding factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
 Identities = 28/53 (52%), Positives = 36/53 (67%)

Query:   228 GALSDTQTPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELE 280
             G++    T G++     + ++K   +RQKRMIKNRESAARSR RKQAY  ELE
Sbjct:   164 GSMGGGVTRGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRERKQAYQVELE 216

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

TAIR|locus:2172507 AT5G44080 [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query:   237 GRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELE 280
             G++     + ++K   +RQ+RMIKNRESAARSR RKQAY  ELE
Sbjct:   217 GKRARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELE 260

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LES3	AI5L2_ARATH	No assigned EC number	0.5830	0.8788	0.9528	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_VIII000037 SubName- Full=Putative uncharacterized protein; (317 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	322
smart00338	65	smart00338, BRLZ, basic region leucin zipper	2e-15
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	8e-12
pfam07716	54	pfam07716, bZIP_2, Basic region leucine zipper	3e-10
cd12193	54	cd12193, B_zip1, basic leucine zipper DNA-binding	7e-07

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 25/52 (48%), Positives = 38/52 (73%)

Query: 249 KTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEV 300
           +  E+R++R  +NRE+A RSR RK+A  +ELE KV +LE ENERL+++   +
Sbjct: 1   EEDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIERL 52

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 59.6 bits (145), Expect = 8e-12
 Identities = 25/42 (59%), Positives = 32/42 (76%)

Query: 253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLR 294
           +R++R  KNRE+A RSR RK+AY +ELE KV  LE EN+ LR
Sbjct: 5   KRERRRQKNREAARRSRLRKKAYIEELEEKVKELEAENKTLR 46

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper

 Score = 54.5 bits (132), Expect = 3e-10
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)

Query: 249 KTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQ 296
           K  E R +R  +N E+A RSR +K+   +ELE +V  LEEEN +LR++
Sbjct: 1   KDDEYRDRRR-RNNEAARRSREKKKQREEELEERVKELEEENAQLRQK 47

Length = 54

>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins

 Score = 45.0 bits (107), Expect = 7e-07
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query: 253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRR 295
            R ++  +NRE+A RSRARK    ++LE+KV  L  EN  L  
Sbjct: 2   PRARKRARNREAARRSRARKMERMKQLEDKVEELTSENSDLED 44

Basic leucine zipper (bZIP) transcription factors act in networks of homo- and hetero-dimers in the regulation in a diverse set of cellular pathways. Classical leucine zippers have alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization creates a pair of basic regions that bind DNA and undergo conformational change. GCN4 was identified in Saccharomyces cerevisiae from mutations in a deficiency in activation with the general amino acid control pathway. GCN4 encodes a trans-activator of amino acid biosynthetic genes containing 2 acidic activation domains and a C-terminal bZIP domain, comprised of a basic alpha-helical DNA-binding region and a coiled-coil dimerization region. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	322
smart00338	65	BRLZ basic region leucin zipper.	99.13
KOG3584	348	consensus cAMP response element binding protein an	99.11
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	99.02
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	99.0
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	98.98
KOG4005	292	consensus Transcription factor XBP-1 [Transcriptio	98.95
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	98.73
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	97.57
KOG0837	279	consensus Transcriptional activator of the JUN fam	97.26
KOG4571	294	consensus Activating transcription factor 4 [Trans	96.75
KOG3119	269	consensus Basic region leucine zipper transcriptio	96.72
KOG4196	135	consensus bZIP transcription factor MafK [Transcri	95.12
KOG3863	604	consensus bZIP transcription factor NRF1 [Transcri	94.76
KOG1414	395	consensus Transcriptional activator FOSB/c-Fos and	91.1
KOG1414	395	consensus Transcriptional activator FOSB/c-Fos and	86.05

>smart00338 BRLZ basic region leucin zipper

Probab=99.13  E-value=1.8e-10  Score=87.08  Aligned_cols=48  Identities=52%  Similarity=0.721  Sum_probs=45.8

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          250 TVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       250 ~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .++|+.+|+++||+||++||.||++|+.+||.++..|+.+|..|+.++
T Consensus         2 ~~~k~~rR~~rNR~aA~~~R~rKk~~~~~Le~~~~~L~~en~~L~~~~   49 (65)
T smart00338        2 EDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEI   49 (65)
T ss_pred             ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999999988

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=99.11  E-value=1.2e-10  Score=111.47  Aligned_cols=53  Identities=36%  Similarity=0.567  Sum_probs=49.5

Q ss_pred             cchhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          245 DVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       245 ~~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      ...|+...||+-|++||||+|+.||+|||+|+++||++|+.||..|.-|-+++
T Consensus       283 ~~aee~trKRevRLmKNREAARECRRKKKEYVKCLENRVAVLENQNKaLIEEL  335 (348)
T KOG3584|consen  283 QGAEEATRKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKALIEEL  335 (348)
T ss_pred             ccchhhhhHHHHHHHhhHHHHHHHHHhHhHHHHHHHhHHHHHhcccHHHHHHH
Confidence            34677889999999999999999999999999999999999999999998887

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=99.02  E-value=8.1e-10  Score=83.33  Aligned_cols=48  Identities=48%  Similarity=0.747  Sum_probs=43.8

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          250 TVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       250 ~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      +..++.+|+++||+||++||.||++|+++||.+|..|+.+|..|+.++
T Consensus         2 ~~~k~~~rr~rNR~AAr~~R~RKk~~~~~Le~~~~~L~~en~~L~~~~   49 (64)
T PF00170_consen    2 KEDKRERRRERNREAARRSRQRKKQYIEELEEKVEELESENEELKKEL   49 (64)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999999999999999887

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=99.00  E-value=1.1e-09  Score=111.64  Aligned_cols=52  Identities=44%  Similarity=0.634  Sum_probs=48.6

Q ss_pred             chhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          246 VVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       246 ~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .+|.++-||+.|||||||||..||+|||+|+..||.++..|.+||+.|++++
T Consensus       274 ~~d~kv~krqQRmIKNResA~~SRkKKKEy~~~Le~rLq~ll~Ene~Lk~EN  325 (655)
T KOG4343|consen  274 GSDIKVLKRQQRMIKNRESACQSRKKKKEYMLGLEARLQALLSENEQLKKEN  325 (655)
T ss_pred             ccCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4667889999999999999999999999999999999999999999999887

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=98.98  E-value=2.7e-09  Score=78.28  Aligned_cols=47  Identities=51%  Similarity=0.742  Sum_probs=44.0

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          250 TVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       250 ~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .++++.+|. +||+||++||.|||+|+.+||.+|..|+.+|..|..++
T Consensus         2 ~~~~~~rR~-rNr~AA~r~R~rkk~~~~~le~~~~~L~~en~~L~~~i   48 (54)
T PF07716_consen    2 DEEKRERRE-RNREAARRSRQRKKQREEELEQEVQELEEENEQLRQEI   48 (54)
T ss_dssp             CHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            457778888 99999999999999999999999999999999999887

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>KOG4005 consensus Transcription factor XBP-1 [Transcription]

Probab=98.95  E-value=2.2e-09  Score=100.53  Aligned_cols=61  Identities=38%  Similarity=0.511  Sum_probs=56.1

Q ss_pred             CCCCCccCCCcchhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          235 TPGRKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       235 ~~~rkR~~~~~~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .+.|||++.+++  ..+||-+||++|||.+|+-+|.|||+.++++|.++.+|.+||+.|..++
T Consensus        53 ~~~rKr~RL~HL--S~EEK~~RrKLKNRVAAQtaRDrKKaRm~eme~~i~dL~een~~L~~en  113 (292)
T KOG4005|consen   53 QPKRKRRRLDHL--SWEEKVQRRKLKNRVAAQTARDRKKARMEEMEYEIKDLTEENEILQNEN  113 (292)
T ss_pred             chHHHHHhhccc--CHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467999999887  6889999999999999999999999999999999999999999887665

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=98.73  E-value=9.8e-09  Score=103.45  Aligned_cols=51  Identities=35%  Similarity=0.599  Sum_probs=47.9

Q ss_pred             hhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          247 VEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       247 ~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .|+.+-||.||+|||.+||+.||+|||+|++.||.+|....+||++|++++
T Consensus       245 aEEriLKrvRRKIrNK~SAQESRrkKkeYid~LE~rv~~~taeNqeL~kkV  295 (472)
T KOG0709|consen  245 AEERILKRVRRKIRNKRSAQESRRKKKEYIDGLESRVSAFTAENQELQKKV  295 (472)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHhHhhHHHHHhhhhhhcccCcHHHHHHH
Confidence            456777999999999999999999999999999999999999999999988

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=97.57  E-value=5.6e-06  Score=66.95  Aligned_cols=50  Identities=30%  Similarity=0.452  Sum_probs=41.9

Q ss_pred             hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          248 EKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       248 e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      +...-|..||..|||.+|+.||.||..++.+||.++..|..+.+.|..++
T Consensus        25 q~~~lK~~RRr~KNR~~A~~cR~rk~~~~~~Le~e~~~l~~~~~~L~~e~   74 (92)
T PF03131_consen   25 QIAELKQRRRRLKNRGYAQNCRKRKLDQIEELEEEIEQLRQEIEQLQQEL   74 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556889999999999999999999999999999988777666665554

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

>KOG0837 consensus Transcriptional activator of the JUN family [Transcription]

Probab=97.26  E-value=0.00082  Score=64.27  Aligned_cols=62  Identities=31%  Similarity=0.343  Sum_probs=46.8

Q ss_pred             CCCCccCCCcchhhhHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          236 PGRKRVASGDVVEKTVERRQKR-MIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       236 ~~rkR~~~~~~~e~~~err~rR-~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |+++-..+.-.+|..+..|..| ..+||++|.+||+||-.++..||.+|..|+.+|..|-..+
T Consensus       188 ~~~~~pispid~e~qe~~kleRkrlrnreaa~Kcr~rkLdrisrLEdkv~~lk~~n~~L~~~l  250 (279)
T KOG0837|consen  188 PELKEPISPIDMEDQEKIKLERKRLRNREAASKCRKRKLDRISRLEDKVKTLKIYNRDLASEL  250 (279)
T ss_pred             cccCCCCCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHH
Confidence            4556554433344445555444 6799999999999999999999999999999888776544

>KOG4571 consensus Activating transcription factor 4 [Transcription]

Probab=96.75  E-value=0.0048  Score=59.85  Aligned_cols=51  Identities=33%  Similarity=0.458  Sum_probs=42.3

Q ss_pred             hHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHh
Q 020697          250 TVERRQKR-MIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR--AEV  300 (322)
Q Consensus       250 ~~err~rR-~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~--~E~  300 (322)
                      ..+|+.+| .++|..+|.|=|+||++-.+.|+-++..|+.+|++||.+.  +|+
T Consensus       223 ~~~~~~~rkr~qnk~AAtRYRqKkRae~E~l~ge~~~Le~rN~~LK~qa~~ler  276 (294)
T KOG4571|consen  223 TPEKKLRRKRQQNKAAATRYRQKKRAEKEALLGELEGLEKRNEELKDQASELER  276 (294)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444444 5667778999999999999999999999999999999988  554

>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription]

Probab=96.72  E-value=0.0066  Score=58.07  Aligned_cols=52  Identities=35%  Similarity=0.490  Sum_probs=45.4

Q ss_pred             chhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          246 VVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       246 ~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      ..|+++.+-..|..||=++|++||.+.|.-..+...+|..|+.||+.|+.++
T Consensus       187 ~~~~~~~~y~err~rNN~A~~kSR~~~k~~~~e~~~r~~~leken~~lr~~v  238 (269)
T KOG3119|consen  187 PVEKKDPEYKERRRRNNEAVRKSRDKRKQKEDEMAHRVAELEKENEALRTQV  238 (269)
T ss_pred             chhcCCHHHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3555666666677789999999999999999999999999999999999998

>KOG4196 consensus bZIP transcription factor MafK [Transcription]

Probab=95.12  E-value=0.099  Score=45.63  Aligned_cols=50  Identities=26%  Similarity=0.447  Sum_probs=40.2

Q ss_pred             hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          248 EKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       248 e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |-...|..||-+|||==|+-+|-|+-..-++||++...|..+.+.|+.++
T Consensus        48 EVvrlKQrRRTLKNRGYA~sCR~KRv~Qk~eLE~~k~~L~qqv~~L~~e~   97 (135)
T KOG4196|consen   48 EVVRLKQRRRTLKNRGYAQSCRVKRVQQKHELEKEKAELQQQVEKLKEEN   97 (135)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34456777789999999999999999999999987776666666666655

>KOG3863 consensus bZIP transcription factor NRF1 [Transcription]

Probab=94.76  E-value=0.024  Score=59.83  Aligned_cols=43  Identities=37%  Similarity=0.512  Sum_probs=39.3

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          255 QKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       255 ~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .||.=|||.+|+++|+||-.-|..||.+|..|..|-++|.++.
T Consensus       492 IRRRgKNkvAAQnCRKRKLd~I~nLE~ev~~l~~eKeqLl~Er  534 (604)
T KOG3863|consen  492 IRRRGKNKVAAQNCRKRKLDCILNLEDEVEKLQKEKEQLLRER  534 (604)
T ss_pred             cccccccchhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566699999999999999999999999999999999988866

>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription]

Probab=91.10  E-value=0.033  Score=55.96  Aligned_cols=57  Identities=35%  Similarity=0.466  Sum_probs=48.3

Q ss_pred             CCccCCCcchhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          238 RKRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLR  294 (322)
Q Consensus       238 rkR~~~~~~~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~  294 (322)
                      .+..+...+.++.++++.+-+++||.+|-++|.|||.++..|+.+...+..+|..|.
T Consensus       270 ~~~~~s~~~~~~p~~~~~~~lern~~aas~~r~~~k~~~~~~~~~~~~~~~~n~~l~  326 (395)
T KOG1414|consen  270 TGGVRSRTVDEDPDERRRRFLERNRAAASRCRQKKKVWVLSLEKKAEELSSENGQLL  326 (395)
T ss_pred             cccccccccCCCchhhhhhhhhhhhhhhccccCCcccccccccccccchhhhhcccc
Confidence            444444445566788886679999999999999999999999999999999999988

>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription]

Probab=86.05  E-value=0.044  Score=55.05  Aligned_cols=52  Identities=31%  Similarity=0.324  Sum_probs=44.8

Q ss_pred             chhhhHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 020697          246 VVEKTVERRQKRMIKNRESAAR---SRARKQAYTQELENKVSRLE-EENERLRRQR  297 (322)
Q Consensus       246 ~~e~~~err~rR~ikNReSA~r---SR~RKkay~~eLE~kv~~Le-~EN~~L~~~~  297 (322)
                      +-.+.+.|+..|..+|+.+|.+   +|.||+.|+..|+.+|+.|+ .+|..|..++
T Consensus       147 ~~~~~~~~~~~rr~rn~~aA~~~~~~r~~~~~~t~~l~~qv~~l~~~~~~~l~~~i  202 (395)
T KOG1414|consen  147 LTPEPEEKRLLRRERNPVAAAKPIPCRNRKKPSTSPLQRQVELLPPGINSPLSPQI  202 (395)
T ss_pred             CCCcchHHHHhhccccccccCCCCCCccccccccccccchHhhcCCCCCcccCccc
Confidence            3446789999999999999999   99999999999999999999 7666655543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	322
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	2e-15
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	2e-12
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	2e-10
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	2e-10
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	5e-10
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	2e-07
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	2e-07
2wt7_B	90	Transcription factor MAFB; transcription, transcri	2e-07
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	4e-07
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	3e-06
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	1e-04

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 68.6 bits (168), Expect = 2e-15
 Identities = 19/44 (43%), Positives = 32/44 (72%)

Query: 253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQ 296
           +R+ R++KNRE+A  SR +K+ Y + LEN+V+ LE +N+ L  +
Sbjct: 1   KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEE 44

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61

 Score = 60.8 bits (148), Expect = 2e-12
 Identities = 15/47 (31%), Positives = 28/47 (59%)

Query: 253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAE 299
           +R+K + +NR +A+RSR +++ + Q LE K   L   N +L+ +   
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTL 47

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAE 299
           + +++ ++NR +A++SR RK      LE KV  L+ +N  L      
Sbjct: 1   KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANM 47

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63

 Score = 54.8 bits (132), Expect = 2e-10
 Identities = 15/48 (31%), Positives = 29/48 (60%)

Query: 252 ERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAE 299
           E+R+ R  +N+ +AA+ R R++  T  L+ +  +LE+E   L+ + A 
Sbjct: 1   EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIAN 48

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63

 Score = 53.9 bits (130), Expect = 5e-10
 Identities = 14/48 (29%), Positives = 29/48 (60%)

Query: 253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEV 300
           ++ K+M +N+ +A R R +K+A  + L  +   LE++NE L+ +   +
Sbjct: 2   KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSL 49

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63

 Score = 46.7 bits (111), Expect = 2e-07
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 246 VVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQ 296
           +V ++ +    +  +N E+A RSRARK    ++LE+KV  L  +N  L  +
Sbjct: 2   IVPESSDPAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENE 52

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107

 Score = 47.7 bits (113), Expect = 2e-07
 Identities = 16/53 (30%), Positives = 31/53 (58%)

Query: 248 EKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEV 300
           E    ++++R +KNR  AA  R ++    +ELE + + L++E E+L  + A +
Sbjct: 32  EIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASM 84

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90

 Score = 46.9 bits (111), Expect = 2e-07
 Identities = 13/53 (24%), Positives = 31/53 (58%)

Query: 248 EKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQRAEV 300
           E    ++++R +KNR  A   R ++      LEN+ ++L ++ E+L+++ + +
Sbjct: 22  EVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRL 74

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Length = 87

 Score = 46.5 bits (110), Expect = 4e-07
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 239 KRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQ 296
           K  A   V + + E + +R  +N  +  +SR + +    E ++KV  L  ENERL+++
Sbjct: 2   KSKAKKTVDKHSDEYKIRRE-RNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKK 58

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Length = 78

 Score = 43.3 bits (102), Expect = 3e-06
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 239 KRVASGDVVEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQ 296
           K  A   V + + E + +R  +N  +  +SR + +    E ++KV  L  ENERL+++
Sbjct: 2   KSKAKKTVDKHSDEYKIRRE-RNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKK 58

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Length = 70

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 249 KTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQ 296
              E   KR  +NR +    R RK+ + + LE +V  L+E +     +
Sbjct: 4   SDQEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLE 51

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	322
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	99.45
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	99.17
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	99.09
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	99.06
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	98.97
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	98.62
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	98.29
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	98.22
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	98.13
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	97.97
2wt7_B	90	Transcription factor MAFB; transcription, transcri	97.51
1skn_P	92	DNA-binding domain of SKN-1; complex (transcriptio	95.14
2oqq_A	42	Transcription factor HY5; homodimer leucine zipper	94.4
2c9l_Y	63	EB1, zebra, BZLF1 trans-activator protein; viral p	93.29
2oxj_A	34	Hybrid alpha/beta peptide based on the GCN4-P1 Se	82.73
3m48_A	33	General control protein GCN4; leucine zipper, synt	82.66
3s9g_A	104	Protein hexim1; cyclin T-binding domain (TBD), cyc	82.57
2kz5_A	91	Transcription factor NF-E2 45 kDa subunit; structu	81.29
1kd8_A	36	GABH AIV, GCN4 acid base heterodimer acid-D12IA16V	80.5

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=99.45  E-value=1.1e-13  Score=101.62  Aligned_cols=45  Identities=42%  Similarity=0.684  Sum_probs=43.7

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       253 rr~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |+++||++||+||++||.|||+|+++||.+|..|+.||..|+.++
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~   45 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEEL   45 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999998

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=99.17  E-value=4.8e-11  Score=89.48  Aligned_cols=46  Identities=30%  Similarity=0.513  Sum_probs=44.5

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          252 ERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       252 err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |||++|+++||+||++||.||++|+.+||.+|..|+.+|..|+.++
T Consensus         1 Ekr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei   46 (63)
T 2wt7_A            1 EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEI   46 (63)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999999988

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=99.09  E-value=1.8e-10  Score=85.59  Aligned_cols=45  Identities=33%  Similarity=0.541  Sum_probs=43.5

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       253 rr~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      ||++|+++||+||++||.|||+|+.+||.+|..|+.+|..|..++
T Consensus         1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i   45 (61)
T 1t2k_D            1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEV   45 (61)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999999999988

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=99.06  E-value=2.2e-10  Score=86.17  Aligned_cols=48  Identities=33%  Similarity=0.411  Sum_probs=39.7

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          250 TVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       250 ~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      ..++..++..+||+||++||.||++|+.+||.+|..|+.+|..|..++
T Consensus         6 ~~d~~~~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev   53 (63)
T 2dgc_A            6 SSDPAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEV   53 (63)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444555569999999999999999999999999999999999987

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=98.97  E-value=1e-09  Score=81.79  Aligned_cols=45  Identities=31%  Similarity=0.485  Sum_probs=42.3

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       253 rr~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |+.+|..+||+||++||.||++|+.+||.+|..|+.+|..|..++
T Consensus         1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v   45 (62)
T 1jnm_A            1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTA   45 (62)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356778899999999999999999999999999999999999988

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=98.62  E-value=4.3e-08  Score=73.53  Aligned_cols=45  Identities=31%  Similarity=0.521  Sum_probs=38.4

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          253 RRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       253 rr~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |+.+++.+||.||+|+|.||++++.+||.++..|+.+|..|+.++
T Consensus         2 k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i   46 (63)
T 1ci6_A            2 KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERA   46 (63)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            577888999999999999999999999999999999999999988

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=98.29  E-value=1.6e-06  Score=67.78  Aligned_cols=50  Identities=28%  Similarity=0.383  Sum_probs=44.0

Q ss_pred             hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          248 EKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       248 e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |+.++.-..|..||.++|++||.++++...+++.++..|+.||..|+.++
T Consensus        10 dk~d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v   59 (78)
T 1gu4_A           10 DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKV   59 (78)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445555557799999999999999999999999999999999999998

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=98.22  E-value=2.9e-06  Score=67.64  Aligned_cols=50  Identities=28%  Similarity=0.383  Sum_probs=44.6

Q ss_pred             hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          248 EKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       248 e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |+.+++-..|..||.++|++||.++++...+++.++..|+.||..|+.++
T Consensus        10 dk~d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v   59 (87)
T 1hjb_A           10 DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKV   59 (87)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34555566667899999999999999999999999999999999999988

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=98.13  E-value=6e-06  Score=63.35  Aligned_cols=43  Identities=28%  Similarity=0.325  Sum_probs=37.5

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          255 QKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       255 ~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .+|...||.|++..|.||++|+.+||.+|..|+.+|..|..++
T Consensus        10 ~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en   52 (70)
T 1gd2_E           10 SKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLEN   52 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677889999999999999999999999999987777665554

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=97.97  E-value=1.5e-06  Score=71.68  Aligned_cols=51  Identities=29%  Similarity=0.437  Sum_probs=43.0

Q ss_pred             hhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          247 VEKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       247 ~e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .+...-|.+||..|||.+|+.||.||.+.+++||.++..|..+.+.|+.++
T Consensus        31 ~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En   81 (107)
T 3a5t_A           31 EEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASEN   81 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTT
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345667999999999999999999999999999988777777666666655

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A

Probab=97.51  E-value=0.00042  Score=55.54  Aligned_cols=50  Identities=26%  Similarity=0.391  Sum_probs=45.1

Q ss_pred             hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          248 EKTVERRQKRMIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       248 e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      +-..-|..||-.|||..|+.||.||..-..+||.++..|..+.+.|++++
T Consensus        22 ev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~   71 (90)
T 2wt7_B           22 EVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEV   71 (90)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44567888899999999999999999999999999999999888888887

>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1

Probab=95.14  E-value=0.01  Score=47.46  Aligned_cols=34  Identities=21%  Similarity=0.360  Sum_probs=28.2

Q ss_pred             hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 020697          248 EKTVERRQKRMIKNRESAARSRARKQAYTQELEN  281 (322)
Q Consensus       248 e~~~err~rR~ikNReSA~rSR~RKkay~~eLE~  281 (322)
                      .-...|..||..|||.+|++||+||.+.+.+|+.
T Consensus        57 Ql~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~   90 (92)
T 1skn_P           57 QRQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH   90 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence            3456788999999999999999999998887764

>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}

Probab=94.40  E-value=0.036  Score=38.45  Aligned_cols=25  Identities=44%  Similarity=0.646  Sum_probs=20.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          273 QAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       273 kay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      |+|+.+||.+++.|+..|.+|..++
T Consensus         2 KaYl~eLE~r~k~le~~naeLEerv   26 (42)
T 2oqq_A            2 SAYLSELENRVKDLENKNSELEERL   26 (42)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHH
Confidence            5788888888888888888887776

>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y

Probab=93.29  E-value=0.58  Score=34.34  Aligned_cols=40  Identities=33%  Similarity=0.341  Sum_probs=31.9

Q ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          258 MIKNRESAARSRARKQAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       258 ~ikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .-|||.++++||+|=|..++-...-...-.+||++|+--+
T Consensus         6 ryknr~asrk~rakfkn~lqh~r~vaaaks~en~rlr~l~   45 (63)
T 2c9l_Y            6 RYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRLRLLL   45 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHH
Confidence            3589999999999988877777666666678999987544

>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*

Probab=82.73  E-value=1.5  Score=29.00  Aligned_cols=23  Identities=30%  Similarity=0.375  Sum_probs=20.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 020697          275 YTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       275 y~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .+..||.+|..|-.+|..|..++
T Consensus         2 RMnQLE~kVEeLl~~n~~Le~eV   24 (34)
T 2oxj_A            2 RMXQLEXKVXELLXKNXHLEXEV   24 (34)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhhhhHHHHH
Confidence            46889999999999999999987

>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A

Probab=82.66  E-value=1.3  Score=29.23  Aligned_cols=22  Identities=32%  Similarity=0.338  Sum_probs=19.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 020697          276 TQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       276 ~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      +..||.+|+.|-.+|..|..++
T Consensus         2 M~QLE~kVEeLl~~n~~Le~EV   23 (33)
T 3m48_A            2 MAQLEAKVEELLSKNWNLENEV   23 (33)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhHHHHHHH
Confidence            5689999999999999999987

>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A

Probab=82.57  E-value=5.5  Score=32.32  Aligned_cols=25  Identities=36%  Similarity=0.448  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          273 QAYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       273 kay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      -+.+.+||.+|..|..||+.|+++.
T Consensus        64 ~~~v~eLe~everL~~ENq~L~~e~   88 (104)
T 3s9g_A           64 DARVRELELELDRLRAENLQLLTEN   88 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4678999999999999999999987

>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=81.29  E-value=0.12  Score=41.27  Aligned_cols=27  Identities=30%  Similarity=0.297  Sum_probs=22.7

Q ss_pred             hhhHHHHHHHHHHhHHHHHHHHHHHHH
Q 020697          248 EKTVERRQKRMIKNRESAARSRARKQA  274 (322)
Q Consensus       248 e~~~err~rR~ikNReSA~rSR~RKka  274 (322)
                      .-...|..||.-|||.+|+++|+||..
T Consensus        61 Ql~lIrdiRRRgKNKvAAqnCRKRKld   87 (91)
T 2kz5_A           61 QLALVRDIRRRGKNKVAAQNYRKRKLE   87 (91)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCCCCC
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            345678889999999999999999853

>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A

Probab=80.50  E-value=1.2  Score=29.79  Aligned_cols=22  Identities=27%  Similarity=0.371  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 020697          276 TQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       276 ~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      +..||.+|..|..+|..|..++
T Consensus         3 MnQLE~kVEeLl~~~~~Le~EV   24 (36)
T 1kd8_A            3 VKQLEAEVEEIESEVWHLENEV   24 (36)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhHHHHHHH
Confidence            5678888888888888887776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	322
d1sknp_	74	Skn-1 {Caenorhabditis elegans [TaxId: 6239]}	86.22
d1uklc_	61	SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}	82.16

>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: A DNA-binding domain in eukaryotic transcription factors
superfamily: A DNA-binding domain in eukaryotic transcription factors
family: A DNA-binding domain in eukaryotic transcription factors
domain: Skn-1
species: Caenorhabditis elegans [TaxId: 6239]

Probab=86.22  E-value=0.16  Score=37.25  Aligned_cols=28  Identities=25%  Similarity=0.321  Sum_probs=23.2

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 020697          250 TVERRQKRMIKNRESAARSRARKQAYTQ  277 (322)
Q Consensus       250 ~~err~rR~ikNReSA~rSR~RKkay~~  277 (322)
                      .--+-.||.=||+.+|+++|+||-....
T Consensus        45 ~lirDIRRRGKNKvAAqnCRKRKld~~d   72 (74)
T d1sknp_          45 QLIRKIRRRGKNKVAARTCRQRRTDRHD   72 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHhcccHHHHHHHHHhhhhhhc
Confidence            4567788899999999999999976543

>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.16  E-value=0.73  Score=31.76  Aligned_cols=24  Identities=25%  Similarity=0.346  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 020697          274 AYTQELENKVSRLEEENERLRRQR  297 (322)
Q Consensus       274 ay~~eLE~kv~~Le~EN~~L~~~~  297 (322)
                      .|+..|+.++..|++|+..|+...
T Consensus        33 ~YI~~Lq~~~~~L~~e~~~L~~~~   56 (61)
T d1uklc_          33 DYIKYLQQVNHKLRQENMVLKLAN   56 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999876