Citrus Sinensis ID: 020721

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
MKASTSRPHQRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNSSSHLSNDSFSNASHVVATNSSSEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIETLTYFNVTANLKPSKLYHIP
cccccccccHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHcccccccccEEEEEEEEEcccHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHcccccccccccEEEEccccEEEEHHHHHHHHccccccccEEEEEEccccccccccccccccEEEcHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccEEcccccccccccccccccEEEEEEcccHHHHHHHHcccccccccccccccccc
cccccccccccEEEHHHHHHHHHHHHHHHHccccHHcHHHcccccccccccccccccccccccccccccccccEEEEEEEEEccccHHHHHHHHHHHHHcccccccEEEEEEEEccccHHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHcccccccccEEEEEccccEEEHHHHHHHHHccccccEEEEEcccccccccccccccccEEEEcHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHccccccccccccEEEccccccccccccccccEEEEEEccccHHHHHHHHHHccccccccccccccc
mkastsrphqrqfIVWSFFFILFLCVIASINEVRFDGllkfgrctflnssshlsndsfsnashvvatnsssedIRILIGIltlpdqyhrRHFLRMiygtqsptgaqvDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKEnmnkgktytyfsslpeifntsdrpyppyhyvmkgdddtYIRLENLVKSlvplpredlyygyvipcrsmdpfvdymsGMGYLVSWDIAewirdsdipknhlegpedkVFGAWIREGRRAKNrynakwsmynfpvprtacthELWADTIAVHLLKNQEKWIETLTYFNVtanlkpsklyhip
mkastsrphqrqFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNSSSHLSNDSFSNASHVVatnsssediRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKslvplpredLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSdipknhlegpedkvfgaWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIETLTYFNVtanlkpsklyhip
MKASTSRPHQRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLnssshlsndsfsnasHVVATNSSSEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIETLTYFNVTANLKPSKLYHIP
***********QFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNS**********************EDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIETLTYFNVTANLK********
***********QFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNSSSHL********************IRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQ*VLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIETLTYFNVTANLKPS******
*********QRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNSSSHLSNDSFSNASHVVATNSSSEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIETLTYFNVTANLKPSKLYHIP
*********QRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNSSSHLSNDSFS*****V***SSSEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIETLTYFNVTANLKPSKLYHIP
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKASTSRPHQRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNSSSHLSNDSFSNASHVVATNSSSEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIETLTYFNVTANLKPSKLYHIP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query322 2.2.26 [Sep-21-2011]
Q9USX0378 Beta-1,3-galactosyltransf yes no 0.680 0.579 0.241 1e-08
Q9ASW1619 Probable beta-1,3-galacto no no 0.565 0.294 0.253 7e-07
Q99NB2377 Lactosylceramide 1,3-N-ac yes no 0.677 0.578 0.244 7e-06
Q9BYG0378 Lactosylceramide 1,3-N-ac yes no 0.5 0.425 0.238 3e-05
Q6P3P5377 Lactosylceramide 1,3-N-ac no no 0.493 0.421 0.274 5e-05
Q8BGY6376 Lactosylceramide 1,3-N-ac yes no 0.496 0.425 0.257 6e-05
A7XDQ9684 Probable beta-1,3-galacto no no 0.540 0.254 0.272 0.0002
Q8L7M1345 Probable beta-1,3-galacto no no 0.385 0.359 0.234 0.0002
Q8GXG6673 Probable beta-1,3-galacto no no 0.611 0.292 0.220 0.0009
>sp|Q9USX0|PVG3_SCHPO Beta-1,3-galactosyltransferase pvg3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pvg3 PE=1 SV=1 Back     alignment and function desciption
 Score = 61.2 bits (147), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 107/273 (39%), Gaps = 54/273 (19%)

Query: 75  RILIGILTLPDQYHRRHFLRMIYG---TQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMR 131
           ++ +GI +      RR+FLR  Y     +      VDV+F+      E +   +  E   
Sbjct: 65  KLYLGIFSQAKNVDRRNFLRTDYNEYIKEFAVNDTVDVRFILGLPENEQELATIREEQRT 124

Query: 132 YDDIIILNCKENMNKGKTYTYFSSLPE--------------------------IFNTSDR 165
           Y D+ +L   EN++ GK+  YF +  E                          I+N S +
Sbjct: 125 YGDLAVLPIPENVDAGKSIVYFQTFLEGYQPFPLFSELADNLIMPSTQFHGSFIYNQSIK 184

Query: 166 PYP---------------PYHYVMKGDDDTYIRLENLVKSLVP-LPREDLYYGYVIPCRS 209
            Y                 Y +++K DDD+++ L  L + L   + +   Y+G     R 
Sbjct: 185 TYELPGMKEFQDLGEPKHDYDFIVKADDDSFLNLPRLFEMLKEHVGKSRFYFGRDCTRRE 244

Query: 210 MDPFVD---YMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNRYNA 266
           +   V    YM G  Y+VS D+A  +      +N +   ED   G  I      KN   +
Sbjct: 245 LPTAVRDFPYMCGFFYIVSPDMAYEVAKR---RNIIIPFEDAQTGYSIYLSGNVKNAEFS 301

Query: 267 KWSMYNFPVPRTACTHE---LWADTIAVHLLKN 296
           K ++Y+  +P     +    L  D IAVH LK+
Sbjct: 302 KCTLYDLILPNEGFNYRQSYLRIDAIAVHKLKS 334
Involved in cell wall biogenesis. Has a role in the addition of Gal-beta1,3 moeities to galactomannans and their subsequent pyruvylation. Has a role in meiosis.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 4
>sp|Q9ASW1|B3GTG_ARATH Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1 Back     alignment and function description
>sp|Q99NB2|B3GN5_RAT Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Rattus norvegicus GN=B3gnt5 PE=2 SV=2 Back     alignment and function description
>sp|Q9BYG0|B3GN5_HUMAN Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Homo sapiens GN=B3GNT5 PE=1 SV=1 Back     alignment and function description
>sp|Q6P3P5|B3GN5_XENTR Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Xenopus tropicalis GN=b3gnt5 PE=2 SV=1 Back     alignment and function description
>sp|Q8BGY6|B3GN5_MOUSE Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase OS=Mus musculus GN=B3gnt5 PE=2 SV=1 Back     alignment and function description
>sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1 Back     alignment and function description
>sp|Q8L7M1|B3GTE_ARATH Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana GN=B3GALT14 PE=2 SV=1 Back     alignment and function description
>sp|Q8GXG6|B3GTH_ARATH Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query322
224143753320 predicted protein [Populus trichocarpa] 0.987 0.993 0.780 1e-148
15242148318 Galactosyltransferase family protein [Ar 0.978 0.990 0.762 1e-136
297796649318 transferase, transferring glycosyl group 0.978 0.990 0.762 1e-136
147854531318 hypothetical protein VITISV_017393 [Viti 0.916 0.927 0.775 1e-135
225446074337 PREDICTED: uncharacterized protein LOC10 0.916 0.875 0.768 1e-135
225446068323 PREDICTED: beta-1,3-galactosyltransferas 0.959 0.956 0.731 1e-135
21537037318 unknown [Arabidopsis thaliana] 0.978 0.990 0.759 1e-135
449457251323 PREDICTED: uncharacterized protein LOC10 0.906 0.904 0.782 1e-134
225446070323 PREDICTED: probable beta-1,3-galactosylt 0.959 0.956 0.719 1e-131
357479703397 hypothetical protein MTR_4g128310 [Medic 0.965 0.783 0.673 1e-123
>gi|224143753|ref|XP_002325062.1| predicted protein [Populus trichocarpa] gi|222866496|gb|EEF03627.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 249/319 (78%), Positives = 277/319 (86%), Gaps = 1/319 (0%)

Query: 4   STSRPHQRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNSSSHLSNDSFSNASH 63
           STS+P + +FI+ S FFI FLC +A+IN +RFD LL FGRC   N  S  S  S SN   
Sbjct: 3   STSKPDRHRFILSSLFFIFFLCALATINGIRFDSLLSFGRCALSNIPSQSSAPS-SNNFL 61

Query: 64  VVATNSSSEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKV 123
            + +++SS+DIRILIG+LTLPDQY RRHFLR+IYGTQSP GAQ+DVKFVFCNLTKEDQKV
Sbjct: 62  AMNSSTSSDDIRILIGVLTLPDQYQRRHFLRLIYGTQSPVGAQIDVKFVFCNLTKEDQKV 121

Query: 124 LVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIR 183
           LVALEIMRYDDIIIL+CKENMNKGKTYTYFSSLPE+ N +D+PYPPYHYVMK DDDTY R
Sbjct: 122 LVALEIMRYDDIIILDCKENMNKGKTYTYFSSLPEMLNDTDKPYPPYHYVMKTDDDTYFR 181

Query: 184 LENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLE 243
           L+NLV+SL PLPREDLYYGYVIPC SMDPFV YMSGMGY++SWDI EWIRDS++PKNHLE
Sbjct: 182 LDNLVESLKPLPREDLYYGYVIPCPSMDPFVHYMSGMGYMISWDIVEWIRDSEVPKNHLE 241

Query: 244 GPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKWIET 303
           GPEDKVFG WIREG RAKNRYNAKWSMYNFP P T CTHELW +T AVHLLKNQEKWI+T
Sbjct: 242 GPEDKVFGDWIREGHRAKNRYNAKWSMYNFPEPPTQCTHELWPNTTAVHLLKNQEKWIQT 301

Query: 304 LTYFNVTANLKPSKLYHIP 322
           L YFNVT+NLKPSKLYHIP
Sbjct: 302 LKYFNVTSNLKPSKLYHIP 320

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|15242148|ref|NP_200558.1| Galactosyltransferase family protein [Arabidopsis thaliana] gi|9758311|dbj|BAB08785.1| unnamed protein product [Arabidopsis thaliana] gi|332009525|gb|AED96908.1| Galactosyltransferase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297796649|ref|XP_002866209.1| transferase, transferring glycosyl groups [Arabidopsis lyrata subsp. lyrata] gi|297312044|gb|EFH42468.1| transferase, transferring glycosyl groups [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|147854531|emb|CAN80704.1| hypothetical protein VITISV_017393 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446074|ref|XP_002269659.1| PREDICTED: uncharacterized protein LOC100246152 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446068|ref|XP_002269534.1| PREDICTED: beta-1,3-galactosyltransferase 6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|21537037|gb|AAM61378.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449457251|ref|XP_004146362.1| PREDICTED: uncharacterized protein LOC101209952 [Cucumis sativus] gi|449510666|ref|XP_004163727.1| PREDICTED: uncharacterized protein LOC101225780 [Cucumis sativus] Back     alignment and taxonomy information
>gi|225446070|ref|XP_002269569.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357479703|ref|XP_003610137.1| hypothetical protein MTR_4g128310 [Medicago truncatula] gi|355511192|gb|AES92334.1| hypothetical protein MTR_4g128310 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query322
TAIR|locus:2174527318 AT5G57500 [Arabidopsis thalian 0.984 0.996 0.755 9.1e-132
POMBASE|SPBC1921.06c378 pvg3 "galactosylxylosylprotein 0.447 0.380 0.288 2.6e-10
UNIPROTKB|Q9BYG0378 B3GNT5 "Lactosylceramide 1,3-N 0.472 0.402 0.269 1.6e-05
UNIPROTKB|F1N1Y2347 B3GNT5 "Uncharacterized protei 0.465 0.432 0.279 5.2e-05
UNIPROTKB|E2R4J5381 B3GNT5 "Uncharacterized protei 0.468 0.396 0.277 6.1e-05
RGD|70955377 B3gnt5 "UDP-GlcNAc:betaGal bet 0.468 0.400 0.267 0.0002
UNIPROTKB|F1NRQ5376 B3GNT5 "Uncharacterized protei 0.468 0.401 0.251 0.00062
TAIR|locus:2174527 AT5G57500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1292 (459.9 bits), Expect = 9.1e-132, P = 9.1e-132
 Identities = 244/323 (75%), Positives = 267/323 (82%)

Query:     1 MKASTSRPHQRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLXXXXXXXXXXXXX 60
             MK+S  R   R+FI+ SFFFI+ LCV+A INE+RFD LL FGRC                
Sbjct:     1 MKSSP-RSEGRKFIIPSFFFIIALCVLAFINEIRFDSLLSFGRCAL----SNVPMNNGSS 55

Query:    61 XXHVVATNSSSEDIRILIGILTLPDQYHRRHFLRMIYGTQS-PTGAQVDVKFVFCNLTKE 119
                +++++   ++IRILIGILTLPDQY RRHFLRMIYGTQ+ P G +VDVKFVFCNLTKE
Sbjct:    56 ETPLLSSSPVDDEIRILIGILTLPDQYSRRHFLRMIYGTQNVPDGVKVDVKFVFCNLTKE 115

Query:   120 DQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDD 179
             DQKVLVALEIMRYDDIIILNC ENMNKGKTYTYFSSLP+IFN +D   PPYHYVMK DDD
Sbjct:   116 DQKVLVALEIMRYDDIIILNCNENMNKGKTYTYFSSLPDIFNETDAQKPPYHYVMKADDD 175

Query:   180 TYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPK 239
             TYIRLE+LV SL PLPREDLYYGYVIPC SMDPFV YMSGMGYLVSWDIA W++DS+IPK
Sbjct:   176 TYIRLESLVASLRPLPREDLYYGYVIPCPSMDPFVHYMSGMGYLVSWDIAVWLKDSEIPK 235

Query:   240 NHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEK 299
              HLEGPEDKVFG WIREGRR KNR+NAKWSMYNFP P T CTHELW DTIAVHLLKNQEK
Sbjct:   236 KHLEGPEDKVFGDWIREGRRGKNRFNAKWSMYNFPEPPTRCTHELWPDTIAVHLLKNQEK 295

Query:   300 WIETLTYFNVTANLKPSKLYHIP 322
             WI TL YFNVT+NLKPSKLYHIP
Sbjct:   296 WIRTLNYFNVTSNLKPSKLYHIP 318
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
POMBASE|SPBC1921.06c pvg3 "galactosylxylosylprotein 3-beta-galactosyltransferase Pvg1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BYG0 B3GNT5 "Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1N1Y2 B3GNT5 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R4J5 B3GNT5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|70955 B3gnt5 "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NRQ5 B3GNT5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_XVIII000297
hypothetical protein (320 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query322
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 1e-08
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information 
 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 32/169 (18%)

Query: 89  RRHFLRMIYGTQSPT-GAQVDVKFVFCNLTKEDQKV--LVALEIMRYDDIIILNCKENMN 145
           RR+ +R  +  +  + G ++   F+       D KV  LV  E   Y DI++++ ++   
Sbjct: 2   RRNAIRKTWMNKGNSEGGRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVDFEDTYE 61

Query: 146 K--GKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPL---PREDLY 200
               KT T        +  S  P   Y  + K DDD Y   + L+  L      P E  +
Sbjct: 62  NLTFKTLTGLL-----YAVSKAPSAKY--IGKIDDDVYFFPDKLLSLLDRGNINPSESSF 114

Query: 201 YGYVI---------PCRSMDP--------FVDYMSGMGYLVSWDIAEWI 232
           YGYV+           +   P        +  Y SG  YL+S D AE +
Sbjct: 115 YGYVMKEGPVIRNKKSKWYVPPSDYPCSRYPPYASGPFYLLSRDAAELL 163

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 322
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 99.97
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.77
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.75
PLN03153 537 hypothetical protein; Provisional 99.44
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.84
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 95.77
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 95.46
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 95.1
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 95.08
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 94.96
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 94.48
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 93.7
PF04646 255 DUF604: Protein of unknown function, DUF604; Inter 92.04
PRK11204 420 N-glycosyltransferase; Provisional 90.13
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 90.07
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 89.99
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 89.14
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 88.96
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 88.92
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 88.09
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 87.89
COG1216305 Predicted glycosyltransferases [General function p 87.46
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 87.38
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 86.46
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 86.2
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 85.62
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 85.56
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 85.5
PRK14583 444 hmsR N-glycosyltransferase; Provisional 84.99
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 83.09
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 80.69
COG1215 439 Glycosyltransferases, probably involved in cell wa 80.4
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-51  Score=388.15  Aligned_cols=253  Identities=21%  Similarity=0.270  Sum_probs=220.5

Q ss_pred             cCCccce------eecCCCCCCeeEEEEEECCCCC--HHHHHHHHHHhccCC--------CCCCceEEEEEecCCCch--
Q 020721           58 FSNASHV------VATNSSSEDIRILIGILTLPDQ--YHRRHFLRMIYGTQS--------PTGAQVDVKFVFCNLTKE--  119 (322)
Q Consensus        58 ~~~~~~l------~~~~~~~~~~~lli~V~S~~~~--~~rR~aIR~TW~~~~--------~~~~~v~~~Fvlg~~~~~--  119 (322)
                      +.+|++|      ++.+|+.++..+++||+|..++  +.||+++|+||.+-.        ++|+.+ ++|++|.+++.  
T Consensus        58 ~~~~~~l~~~~~~~~~~w~~~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~l-v~y~l~~H~~~~~  136 (382)
T PTZ00210         58 IDEDEYLMFVPSNVAAVWKAQRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLL-PLYLLAPHQSNSY  136 (382)
T ss_pred             cchhhhhhccCHHHHHHhccCCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhh-hhhhhccCCccch
Confidence            5566665      6899999999999999999999  799999999996432        566665 99999999988  


Q ss_pred             hHHHHHHHHHhhCCCeEEeccCCcC------------------Cc--hHHHHHHHhhhhHhcCCCCCCCCceEEEEecCc
Q 020721          120 DQKVLVALEIMRYDDIIILNCKENM------------------NK--GKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDD  179 (322)
Q Consensus       120 ~~~~~l~~E~~~~~DIv~ld~~D~y------------------~n--~Kt~~~~~w~~~~~~~~~~~c~~~~yvlK~DDD  179 (322)
                      +.+.+|.+|+++|||||++||.|.|                  .+  +||+++|+|+.+.       ||+++||+|+|||
T Consensus       137 ~~~~~L~eEA~~~~DIVilpf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~-------cP~a~YImKgDDD  209 (382)
T PTZ00210        137 LISHSLKEEAARTHDIITLPTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHM-------FPNVSYIVKGDDD  209 (382)
T ss_pred             hhhHHHHHHHHHhCCEEEEecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHh-------CCCCCeEEEcCCC
Confidence            7788999999999999999996666                  23  9999999999886       8899999999999


Q ss_pred             eEeeHHHHHHHhcCCCCCCeEEEEeecCC-C-CCCCCcccccceeeeCHHHHHHHHHcCCC-CC---------------C
Q 020721          180 TYIRLENLVKSLVPLPREDLYYGYVIPCR-S-MDPFVDYMSGMGYLVSWDIAEWIRDSDIP-KN---------------H  241 (322)
Q Consensus       180 ~fv~~~~L~~~L~~~~~~~~y~G~~~p~r-~-~~~yp~y~~G~gYvlS~d~~~~i~~~~~~-~~---------------~  241 (322)
                      +|||+++++++|+..|++++|+|.+.... + .+.+|+||+|+||+||+|+|+.|++..++ +.               .
T Consensus       210 vFVrVp~lL~~Lr~~prr~LY~G~v~~~~~p~Rd~~PpY~~G~gYvLSrDVA~~Lvs~~pl~rL~~~pys~~~~~~y~~~  289 (382)
T PTZ00210        210 IFIRVPKYLADLRVMPRHGLYMGRYNYYNRIWRRNQLTYVNGYCITLSRDTAQAIISYKPLERLVNMPFSMWDYFDFLDL  289 (382)
T ss_pred             eEeeHHHHHHHHhhCCCCceEEEeeCCCCccccCCCCCccccceeeccHHHHHHHHhhChHhHhhcCCCchHHHHHHHHh
Confidence            99999999999999999999999986431 1 24579999999999999999999997543 22               4


Q ss_pred             CCCchhHHHHHHHHhcCCCCccccCccceeecCCC-CCcccccccCCEEEEEccCCHHHHHHHHHHccccCC-CCCCCCC
Q 020721          242 LEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVP-RTACTHELWADTIAVHLLKNQEKWIETLTYFNVTAN-LKPSKLY  319 (322)
Q Consensus       242 ~~~~EDv~vG~~l~~~~~~~~~~~~~~~f~~~~~~-~~~c~~~~~~~~ia~H~~~~~~~~~~~~~~fn~~~~-~~p~~~~  319 (322)
                      .+..||+++|.+|+..++.++.++.+..+|+|+.. ...|.+++.+++|++|+++++| |+.++++|+.+.+ .||+|.+
T Consensus       290 ~~~~EDiMvG~vLr~~~k~~~l~~V~~~~c~Fhd~~~~~~~~~v~~~sVvvHhike~d-Ya~Lm~~F~n~~~~~~P~~~~  368 (382)
T PTZ00210        290 GMFYEDVMVGMILREKVVYRNLISVEMGRCHFHNAGKFGVRKSVRNMSVVIHHIQEAD-YEMLMDYFPEGVIPPAPSKVM  368 (382)
T ss_pred             hcCchHHHHHHHHHHhcCcCceeeeccccccceecCCCCCccccccceEEEEecCHHH-HHHHHHHhcCCCCCCCCcceE
Confidence            57899999999999988888888888999999875 5778888999999999999997 9999999999988 6898865

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query322
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 44/190 (23%)

Query: 70  SSEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEI 129
           S E+I     I+   D          ++ T      ++  KFV   L + + K L+    
Sbjct: 47  SKEEIDH---IIMSKDAVSG---TLRLFWTLLSKQEEMVQKFVEEVL-RINYKFLM--SP 97

Query: 130 MRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVK 189
           ++ +               T  Y      ++N + + +  Y+ V +     Y++L   + 
Sbjct: 98  IKTEQ--------RQPSMMTRMYIEQRDRLYNDN-QVFAKYN-VSRL--QPYLKLRQALL 145

Query: 190 SLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKV 249
            L P          V+        +D + G G   +W   +      +        + K+
Sbjct: 146 ELRPAK-------NVL--------IDGVLGSGK--TWVALDVCLSYKV----QCKMDFKI 184

Query: 250 FGAWIREGRR 259
           F  W+     
Sbjct: 185 F--WLNLKNC 192
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query322
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.9
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 93.16
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 91.22
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 90.46
3bcv_A240 Putative glycosyltransferase protein; protein stru 89.93
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 89.62
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 88.37
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 86.68
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 85.13
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=99.90  E-value=6.6e-23  Score=190.08  Aligned_cols=197  Identities=16%  Similarity=0.151  Sum_probs=130.9

Q ss_pred             CeeEEEEEECCCCCH-HHHHHHHHHhccCCCCCCceEEEEEecCCCchhHHHHHHHHHhhCCCeEEeccCCcC--Cc--h
Q 020721           73 DIRILIGILTLPDQY-HRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKEDQKVLVALEIMRYDDIIILNCKENM--NK--G  147 (322)
Q Consensus        73 ~~~lli~V~S~~~~~-~rR~aIR~TW~~~~~~~~~v~~~Fvlg~~~~~~~~~~l~~E~~~~~DIv~ld~~D~y--~n--~  147 (322)
                      .-.|+|+|+|++++. +|+.+||+||++++.    . ..|+++..+++..+    .+  ..+++++.++.+++  .+  .
T Consensus        12 ~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~----~-~~fifsd~~d~~l~----~~--~~~~~~~~~~~~~~~~~~l~~   80 (280)
T 2j0a_A           12 LGDIFIAVKTTWAFHRSRLDLLLDTWVSRIR----Q-QTFIFTDSPDERLQ----ER--LGPHLVVTQCSAEHSHPALSC   80 (280)
T ss_dssp             GGGEEEEEECCGGGTTTTHHHHHHTGGGGSG----G-GEEEEESSCCHHHH----HH--HGGGEEECCC-------CCCH
T ss_pred             cccEEEEEECcHHHHHHHHHHHHHHHhccCC----C-ceEEEcCCCccccc----cc--ccccceeccccccccccchHH
Confidence            467889999999855 799999999998751    1 24544544444332    22  24578888876654  33  7


Q ss_pred             HHHHHHHhhhhHhcCCCCCCCCceEEEEecCceEeeHHHHHHHhcCC-CCCCeEEEEeecCCCC-------------CCC
Q 020721          148 KTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVPL-PREDLYYGYVIPCRSM-------------DPF  213 (322)
Q Consensus       148 Kt~~~~~w~~~~~~~~~~~c~~~~yvlK~DDD~fv~~~~L~~~L~~~-~~~~~y~G~~~p~r~~-------------~~y  213 (322)
                      |+...+++..         +++++|++|+|||+||+++||+++|+.. +.+++|+|.....++.             ..|
T Consensus        81 K~~~~~~~~l---------~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~  151 (280)
T 2j0a_A           81 KMAAEFDAFL---------VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRF  151 (280)
T ss_dssp             HHHHHHHHHH---------HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------C
T ss_pred             HHHHHHHHHh---------CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCcccccccccc
Confidence            8877776543         2478999999999999999999999886 5679999987632210             124


Q ss_pred             Cccc-ccceeeeCHHHHHHHHHcCCC------CCCCCCchhHHHHHHHH-hcCCCCccccCccceeecCCC---CCcccc
Q 020721          214 VDYM-SGMGYLVSWDIAEWIRDSDIP------KNHLEGPEDKVFGAWIR-EGRRAKNRYNAKWSMYNFPVP---RTACTH  282 (322)
Q Consensus       214 p~y~-~G~gYvlS~d~~~~i~~~~~~------~~~~~~~EDv~vG~~l~-~~~~~~~~~~~~~~f~~~~~~---~~~c~~  282 (322)
                       +|| +|+||+||++++++|+.....      .......||+++|.|+. ++|+....   ...|..+...   ...+..
T Consensus       152 -~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~---~~~Fh~~~~~~~~~~~~~l  227 (280)
T 2j0a_A          152 -WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQP---SPLFHSHLETLQLLGAAQL  227 (280)
T ss_dssp             -CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEE---CTTCCCSSSCGGGCCTTTG
T ss_pred             -CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCcee---cccccCCCchhccCCHHHh
Confidence             576 578999999999999974211      01334579999999998 89997643   2456554432   334432


Q ss_pred             cccCCEEEEEcc
Q 020721          283 ELWADTIAVHLL  294 (322)
Q Consensus       283 ~~~~~~ia~H~~  294 (322)
                      . ..-++++|..
T Consensus       228 ~-~~~~~s~~~~  238 (280)
T 2j0a_A          228 P-EQVTLSYGVF  238 (280)
T ss_dssp             G-GCSEEECEEE
T ss_pred             c-cCcceecccc
Confidence            1 1346777853
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query322
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 90.74
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.74  E-value=2.7  Score=35.60  Aligned_cols=44  Identities=18%  Similarity=0.091  Sum_probs=33.5

Q ss_pred             cccccceeeeCHHHHHHHHHcCCCCCCCCCchhHHHHHHHHhcCC
Q 020721          215 DYMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRR  259 (322)
Q Consensus       215 ~y~~G~gYvlS~d~~~~i~~~~~~~~~~~~~EDv~vG~~l~~~~~  259 (322)
                      +++.|++..+++++.+.+-.-. ......+.||+-++.-+.+.|-
T Consensus       195 ~~~~g~~~~irr~~f~~vGgfD-e~~~~~g~ED~Dl~~R~~~~G~  238 (328)
T d1xhba2         195 PTMAGGLFSIDRDYFQEIGTYD-AGMDIWGGENLEISFRIWQCGG  238 (328)
T ss_dssp             SBCCSSSEEEEHHHHHHTTSCC-TTSCTTCCCCSHHHHHHHHTTC
T ss_pred             ceecceeeeeeHHHHHHhCCCC-CCCcCcCchHHHHHHHHHHhCC
Confidence            4688999999999999886543 2334556899999888877764