Citrus Sinensis ID: 020761

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
Protein Sequence
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccccHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEccccccccccccccccHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITdlgvdapiTQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVqgnflfnkafqftsissvtlldccaipcaiVFTWVFLGTRYSVWQLFGASLCVLGLGLMllsdaemaggggsrplLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSttakdllpipalengnydvqyqrlddenmasrgkesfy
Flexible Loop (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDenmasrgkesfy
Low Complexity Region (SEG)
MNLMNAIISCWSGRSQMAlrtlyllllgqlvsfslalSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASlcvlglglmllSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Disordered region (IsUnstruct)
***MNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQY*****************
Disordered Region (DISOPRED)
************GRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS**************************************
Disordered Region (DISEMBL)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENM*********
Disordered Region (DISPRO)
*NL*NAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA***********************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNLMNAIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPALENGNYDVQYQRLDDENMASRGKESFY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	321	2.2.26 [Sep-21-2011]
Q5T1Q4	408	Solute carrier family 35	yes	no	0.831	0.654	0.324	3e-39
Q8BGK5	408	Solute carrier family 35	yes	no	0.831	0.654	0.327	2e-38
Q8IXU6	374	Solute carrier family 35	no	no	0.809	0.695	0.315	2e-36
Q7TML3	375	Solute carrier family 35	no	no	0.831	0.712	0.307	7e-36
Q0V9U2	391	Solute carrier family 35	yes	no	0.806	0.662	0.315	2e-34
O59785	505	Uncharacterized solute ca	yes	no	0.834	0.530	0.259	6e-24

>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2

 Score =  162 bits (410), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 164/299 (54%), Gaps = 32/299 (10%)

Query: 27  LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +     T+  ++ D   + P+ QS L Y+ L L Y   L  R+        L
Sbjct: 66  LGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y++LG +D++ N+L  KA+Q+T+++S+ LLDC  IP  I+ +W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 140 LFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
             G  +C+LG+G M+ +D  +    G G   L+GD+LV+ GA  + +S V EE++++ + 
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLS 245

Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI----------------------- 234
           RVE + MIG++G   S +QL+ +E K L  V W   I                       
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305

Query: 235 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 293
            + AT + LS+LT+D++++   +F +H + +  Y L+F  +LIGL++YS+T+  +   P
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDP 364

Putative solute transporter.
Homo sapiens (taxid: 9606)

>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2 SV=1

 Score =  159 bits (402), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 162/299 (54%), Gaps = 32/299 (10%)

Query: 27  LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +     T+  +  D   + P+ QS L Y+ L L Y   L  R+        L
Sbjct: 66  LGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y++LG +D++ N+L  KA+Q+T+++SV LLDC  IP  I+ +W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 140 LFGASLCVLGLGLMLLSDAEMA--GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
             G  +C+LG+G M+ +D  +    G G   L+GD+LV+ GA  + +S V EE +++ + 
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLS 245

Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI----------------------- 234
           RVE + MIG++G   S +QL+ +E K L  V W   I                       
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305

Query: 235 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 293
            + AT + LS+LT+D++++   +F +H + +  Y L+F  +LIGL++YS+T+  +   P
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDP 364

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1

 Score =  153 bits (387), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 162/292 (55%), Gaps = 32/292 (10%)

Query: 27  LGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +  ++ T+  + +   V+ P+ QS + Y  L L Y  +L +R         L
Sbjct: 45  LGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVIL 104

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y+LLG  DV+ N++  +A+Q+T+++SV LLDC  IP  +  +W  L  RY V  
Sbjct: 105 KRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIH 164

Query: 140 LFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
               ++C+LG+G M+ +D  A      GS  L+GDILV+ GA  +A+S V EE++VKK+ 
Sbjct: 165 FIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLS 224

Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI----------------------- 234
           R E + M+G++G ++S +QL  +E K + S+ W   I                       
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIK 284

Query: 235 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA 286
           ++ AT + L +LT+D++++ + +F +  + +  Y L+F  +++G I+Y +T 
Sbjct: 285 VTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILYCSTP 336

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2 SV=2

 Score =  151 bits (381), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 162/299 (54%), Gaps = 32/299 (10%)

Query: 27  LGQLVSFSLALSSFTTAVITD-LGVDAPITQSVLCYLSLALAYGGILLYRR------QRL 79
           LGQ++S  +  ++ T+  + +   V+ P+ QS + Y  L L Y  +L ++       + L
Sbjct: 45  LGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEIL 104

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y LLG  DV+ N+L  +A+Q+T+++SV LLDC  IP  +  +W  L  RY V  
Sbjct: 105 RRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIH 164

Query: 140 LFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID 197
                +C+LG+G M+ +D  A      GS  L+GDILV+ GA  +A+S V EE++VKK+ 
Sbjct: 165 FIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLS 224

Query: 198 RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI----------------------- 234
           R E + M+G++G ++S +QL  +E K +  ++W   I                       
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVIK 284

Query: 235 LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP 293
           ++ AT + L +LT+D++++   +F +  + +  Y L+F  +++G I+Y +T    +  P
Sbjct: 285 VTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFILYCSTPTRTVEPP 343

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2 PE=2 SV=2

 Score =  146 bits (369), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 152/295 (51%), Gaps = 36/295 (12%)

Query: 27  LGQLVSFSLALSSFTTAVIT-DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------L 79
           LGQ++S  +     T+  ++ D   + P+ QS L Y+ L L Y   L  R+        L
Sbjct: 45  LGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 104

Query: 80  QVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQ 139
           +  W+ Y+ LG +D++  +L  KA Q+T+  S+ LL+C  IP  I+ +W FL  RY V  
Sbjct: 105 KRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILLSWFFLLVRYKVLH 164

Query: 140 LFGASLCVLGLGLMLLSDAEMAGG------GGSRPLLGDILVIAGAIFFAMSYVGEEFLV 193
             GA  C+LG+G M  +D  M          G   L+GD+LV+ GA  + +S V +E++V
Sbjct: 165 FIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGATLYGISSVCQEYIV 224

Query: 194 KKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI------------------- 234
           + + RVE++ MIG++G   S +QL+ +E K L  V W   I                   
Sbjct: 225 RNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFTACMFGLYSFMP 284

Query: 235 ----LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 285
                + AT + LS+LT++++     +F +H + +  Y L+F  +L+GL+ Y +T
Sbjct: 285 VVIKKTSATAINLSMLTAELYTFFCGLFLFHYKFSGLYLLSFFTILLGLVFYFST 339

Putative solute transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC320.08 PE=1 SV=1

 Score =  111 bits (278), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 150/308 (48%), Gaps = 40/308 (12%)

Query: 14  RSQMALRTLYLLL---------LGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSL 64
            S    + LY LL         LGQ++S  +  ++     ++ +  + P  Q+ L Y  L
Sbjct: 125 ESTPKAKPLYFLLDKRFWIVFFLGQVLSLCITATNTFNGYMSGIS-NIPAFQTFLVYALL 183

Query: 65  ALAYGGILLYR---RQRLQVSW---YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC 118
            L Y    ++R   ++  ++ +   + Y++  F DV+GN+    A+Q+T++ S +LLD  
Sbjct: 184 TLVYTPYTVFRMGFKKYFEMIFRHGWKYIIFAFFDVEGNYFVVLAYQYTNMLSASLLDSW 243

Query: 119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGG-GGSRPLLGDILVIA 177
           A    ++ +++FL  RY   Q+ G   C+ GL L+++SD    G      P LGD  +I 
Sbjct: 244 ATVAVVILSFIFLKVRYHWSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMII 303

Query: 178 GAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI--- 234
           GA  + +S   EE+   K+    V+  + +YG ++S++Q    +   L ++ W++++   
Sbjct: 304 GATCYGVSNTLEEYFASKLPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEMGGY 363

Query: 235 --------------------LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAA 274
                               +S AT   +S+LTSD W++++ I  +   V W Y +AF  
Sbjct: 364 LAGFILVMFLLYSLAPILFRMSSATFYNISLLTSDFWSLVIGIHVFGYHVYWLYPIAFVL 423

Query: 275 VLIGLIIY 282
           +++GL +Y
Sbjct: 424 IILGLFVY 431

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
297740093	337	unnamed protein product [Vitis vinifera]	0.965	0.919	0.621	1e-116
359481996	352	PREDICTED: solute carrier family 35 memb	0.965	0.880	0.614	1e-113
359481998	673	PREDICTED: solute carrier family 35 memb	0.962	0.459	0.608	1e-109
297740094	337	unnamed protein product [Vitis vinifera]	0.962	0.916	0.608	1e-108
255575633	340	conserved hypothetical protein [Ricinus	0.943	0.891	0.636	2e-95
357511003	363	Solute carrier family 35 member F1 [Medi	0.903	0.798	0.547	7e-88
357511005	349	Solute carrier family 35 member F2 [Medi	0.900	0.828	0.545	8e-85
224134462	267	predicted protein [Populus trichocarpa]	0.738	0.887	0.655	1e-82
297740095	356	unnamed protein product [Vitis vinifera]	0.841	0.758	0.566	9e-79
242088093	347	hypothetical protein SORBIDRAFT_09g02187	0.872	0.806	0.506	4e-76

>gi|297740093|emb|CBI30275.3| unnamed protein product [Vitis vinifera]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/333 (62%), Positives = 259/333 (77%), Gaps = 23/333 (6%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           +S W     + LRTLY+L LGQ+VSF LA++SF+++ I DLGVDAP+TQS   YLSLAL 
Sbjct: 1   MSSWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLALV 60

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
           YG ILLYRRQ+L++SWYWYL LGFVDVQGN+L NKA+Q++SI+SVTLLDC  IP  I+ T
Sbjct: 61  YGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVIILT 120

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LC++GLGL+LLSDA + GG GSRPLLGDILVIAG +FFA+S V
Sbjct: 121 WIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGVGGGDGSRPLLGDILVIAGTLFFALSNV 180

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI------------- 234
           GEEF VKK DRVEVV MIG++GLLVSV ++S +ELKSLESV+WSTDI             
Sbjct: 181 GEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDIILGFVGYAVSTFL 240

Query: 235 ----------LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 284
                     +SGAT   LS+LTSDMWAV++RIF YHQ+V+W YY++FA V +GL+IYS 
Sbjct: 241 FYTIVPFLLQISGATWFNLSLLTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIYSK 300

Query: 285 TAKDLLPIPALENGNYDVQYQRLDDENMASRGK 317
           T KD +P+P L +GN++ +YQ LD+EN  SR +
Sbjct: 301 TEKDPIPLPTLGDGNHNAEYQVLDEENTESRNE 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481996|ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/335 (61%), Positives = 258/335 (77%), Gaps = 25/335 (7%)

Query: 6   AIISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLA 65
           A +  W     + LRTLY+L LGQ+VSF LA++SF+++ I DLGVDAP+TQS   YLSLA
Sbjct: 16  ADLDAWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLA 75

Query: 66  LAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIV 125
           L YG ILLYRRQ+L++SWYWYL LGFVDVQGN+L NKA+Q++SI+SVTLLDC  IP  I+
Sbjct: 76  LVYGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVII 135

Query: 126 FTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMS 185
            TW+FLGTRYS+WQ FGA+LC++GLGL+LLSDA +  G GSRPLLGDILVIAG +FFA+S
Sbjct: 136 LTWIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGV--GDGSRPLLGDILVIAGTLFFALS 193

Query: 186 YVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI----------- 234
            VGEEF VKK DRVEVV MIG++GLLVSV ++S +ELKSLESV+WSTDI           
Sbjct: 194 NVGEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDIILGFVGYAVST 253

Query: 235 ------------LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY 282
                       +SGAT   LS+LTSDMWAV++RIF YHQ+V+W YY++FA V +GL+IY
Sbjct: 254 FLFYTIVPFLLQISGATWFNLSLLTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIY 313

Query: 283 STTAKDLLPIPALENGNYDVQYQRLDDENMASRGK 317
           S T KD +P+P L +GN++ +YQ LD+EN  SR +
Sbjct: 314 SKTEKDPIPLPTLGDGNHNAEYQVLDEENTESRNE 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481998|ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/332 (60%), Positives = 249/332 (75%), Gaps = 23/332 (6%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           ++ W   ++ +LRTL++LLLGQ+VSF LA+S FT++ I DLGVDAP+TQS   YL LAL 
Sbjct: 337 MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 396

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
            G ILLYRRQRLQVSWYWYL LGF+DVQGN+L NKAFQ++S++SV LLDC  IP  I+ T
Sbjct: 397 NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 456

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LCV GLGL+LLSDA + G GGSRPLLGD LVIAG +  AMS V
Sbjct: 457 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 516

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI------------- 234
           GEEF VKK DRVE++ M+G++GLLVSV ++S +ELKSLES++WST I             
Sbjct: 517 GEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIVLAFVGFALSNFL 576

Query: 235 ----------LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 284
                     +SGATM  LS LTSDMWAV++RIF Y Q+V+W YYL+FA V IG+IIYST
Sbjct: 577 FYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIIIYST 636

Query: 285 TAKDLLPIPALENGNYDVQYQRLDDENMASRG 316
           T KD +P P+ E+GN   QYQ L+ E+  SR 
Sbjct: 637 TEKDPIPSPSPEDGNLSAQYQVLNGESTESRN 668

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740094|emb|CBI30276.3| unnamed protein product [Vitis vinifera]

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/332 (60%), Positives = 249/332 (75%), Gaps = 23/332 (6%)

Query: 8   ISCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALA 67
           ++ W   ++ +LRTL++LLLGQ+VSF LA+S FT++ I DLGVDAP+TQS   YL LAL 
Sbjct: 1   MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 60

Query: 68  YGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFT 127
            G ILLYRRQRLQVSWYWYL LGF+DVQGN+L NKAFQ++S++SV LLDC  IP  I+ T
Sbjct: 61  NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 120

Query: 128 WVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYV 187
           W+FLGTRYS+WQ FGA+LCV GLGL+LLSDA + G GGSRPLLGD LVIAG +  AMS V
Sbjct: 121 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 180

Query: 188 GEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI------------- 234
           GEEF VKK DRVE++ M+G++GLLVSV ++S +ELKSLES++WST I             
Sbjct: 181 GEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIVLAFVGFALSNFL 240

Query: 235 ----------LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST 284
                     +SGATM  LS LTSDMWAV++RIF Y Q+V+W YYL+FA V IG+IIYST
Sbjct: 241 FYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIIIYST 300

Query: 285 TAKDLLPIPALENGNYDVQYQRLDDENMASRG 316
           T KD +P P+ E+GN   QYQ L+ E+  SR 
Sbjct: 301 TEKDPIPSPSPEDGNLSAQYQVLNGESTESRN 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575633|ref|XP_002528716.1| conserved hypothetical protein [Ricinus communis] gi|223531810|gb|EEF33628.1| conserved hypothetical protein [Ricinus communis]

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 208/327 (63%), Positives = 250/327 (76%), Gaps = 24/327 (7%)

Query: 9   SCWSGRSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAY 68
           SC   +S   L+ LYLLLLGQ+VSF LA+ S T++++ DLG+DAPITQS   Y +LAL +
Sbjct: 8   SCRWWKSHATLKILYLLLLGQVVSFILAVCSLTSSLVVDLGIDAPITQSSFNYFALALVF 67

Query: 69  GGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTW 128
           G ILLYRRQ+L+VSWYWYLLLGFVDVQGN+L N+A+Q+TSI+SVTLLDC  I  AIV TW
Sbjct: 68  GSILLYRRQKLRVSWYWYLLLGFVDVQGNYLVNRAYQYTSITSVTLLDCWTIVWAIVLTW 127

Query: 129 VFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVG 188
            FLGTRYS+WQLFGA+LCVLGLGL+LLSDA + GGGGSRPLLGD+LVIAG IFFA+S VG
Sbjct: 128 FFLGTRYSIWQLFGAALCVLGLGLVLLSDAGVGGGGGSRPLLGDLLVIAGTIFFALSNVG 187

Query: 189 EEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI-------------- 234
           EEF VK  DRVEVV M+G++GLLVSVVQLS LELK+L+S+ W+ DI              
Sbjct: 188 EEFFVKNKDRVEVVAMLGIFGLLVSVVQLSVLELKTLKSINWTADIILAIAGYTLSMFMF 247

Query: 235 ---------LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT 285
                    L GATM  LS+LTSDMWAV+ RI  YHQ+V+W Y+L+ A V +GLIIYSTT
Sbjct: 248 YTLTPFVLKLGGATMFNLSMLTSDMWAVVFRICFYHQEVDWLYFLSLAVVTVGLIIYSTT 307

Query: 286 AKD-LLPIPALENGNYDVQYQRLDDEN 311
            K+   PIPALE GN + +YQ L+D N
Sbjct: 308 DKESSAPIPALEEGNSNGEYQVLNDGN 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511003|ref|XP_003625790.1| Solute carrier family 35 member F1 [Medicago truncatula] gi|355500805|gb|AES82008.1| Solute carrier family 35 member F1 [Medicago truncatula]

 Score =  330 bits (845), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 179/327 (54%), Positives = 228/327 (69%), Gaps = 37/327 (11%)

Query: 31  VSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLG 90
           VSF LAL S T+++I   GVDAP+TQS+  Y SLAL YG ILLYR Q+  VSWYWYLLLG
Sbjct: 28  VSFLLALMSITSSLIAQFGVDAPLTQSLFTYGSLALVYGSILLYRHQKPLVSWYWYLLLG 87

Query: 91  FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGL 150
           F D QG +L  KA+Q+TS++SVTLLDC  +P AI+ TW+FLGTRYS+WQL G +LCVLGL
Sbjct: 88  FADAQGCYLVIKAYQYTSVTSVTLLDCWTVPWAILLTWIFLGTRYSLWQLCGGTLCVLGL 147

Query: 151 GLMLLSDA---EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGV 207
            L+L SD       GGGGS+P+LGD+LVI G +F+A+S V EEF VKK DRVE V M+GV
Sbjct: 148 SLVLFSDTWDGGGGGGGGSKPVLGDVLVIVGTVFYAISNVVEEFCVKKKDRVETVTMLGV 207

Query: 208 YGLLVSVVQLSTLELKSLESVKWSTDI-----------------------LSGATMLILS 244
           YG LV+ +++S LELK+L+S+KWS+DI                       LSG+TM  LS
Sbjct: 208 YGFLVTAIEVSVLELKTLKSIKWSSDIVLAFAGYGVSSFMFYSLAPFVLKLSGSTMFNLS 267

Query: 245 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPA-LENGNYDVQ 303
           +LTSD+WAV+ R+F YHQ+V+W Y+++F  V IGLIIYSTT K L+P  A  E+ N + +
Sbjct: 268 LLTSDIWAVVFRVFIYHQKVDWLYFVSFLVVAIGLIIYSTTEKKLVPASATTEDENLNTE 327

Query: 304 YQRLDDEN----------MASRGKESF 320
           YQ L+ EN          +ASRGK  +
Sbjct: 328 YQILNGENESSTFAQNDSLASRGKPHW 354

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511005|ref|XP_003625791.1| Solute carrier family 35 member F2 [Medicago truncatula] gi|355500806|gb|AES82009.1| Solute carrier family 35 member F2 [Medicago truncatula]

 Score =  320 bits (819), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 173/317 (54%), Positives = 222/317 (70%), Gaps = 28/317 (8%)

Query: 31  VSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLG 90
           VSF LAL S T+++I   GVDAP+TQS+  Y SLAL YG ILLYR Q+  VSWYWYLLLG
Sbjct: 28  VSFLLALMSITSSLIAQFGVDAPLTQSLFTYGSLALVYGSILLYRHQKPLVSWYWYLLLG 87

Query: 91  FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGL 150
           F D QG +L  KA+Q+TS++SVTLLDC  +P AI+ TW+FLGTRYS+WQL G +LCVLGL
Sbjct: 88  FADAQGCYLVIKAYQYTSVTSVTLLDCWTVPWAILLTWIFLGTRYSLWQLCGGTLCVLGL 147

Query: 151 GLMLLSDA----EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIG 206
            L+L SD        GGGGS+P+LGD+LVI G +FFA+S V EEF VKK DRVE V M+G
Sbjct: 148 SLVLFSDTWDGGGGGGGGGSKPILGDVLVIVGTVFFAVSNVVEEFCVKKKDRVEAVTMLG 207

Query: 207 VYGLLVSVVQLSTLELKSLESVKWSTDIL-----------------------SGATMLIL 243
           VYG LV+ +++S LELK+L+S+KWS DI+                        G+ M  L
Sbjct: 208 VYGFLVTAIEVSVLELKTLKSIKWSGDIVLAFAGYGVSSFIYCSLAPFVLKFGGSAMFNL 267

Query: 244 SVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIPA-LENGNYDV 302
           S+LTSDMWAV+ R+F YHQ+V+W Y+++F  V IGLIIYSTT K L+P  A  E+ N + 
Sbjct: 268 SLLTSDMWAVLFRVFIYHQKVDWLYFVSFLVVGIGLIIYSTTEKKLVPASATTEDENLNT 327

Query: 303 QYQRLDDENMASRGKES 319
           +YQ L+ E+ ++   +S
Sbjct: 328 EYQILNGESESTTLDQS 344

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134462|ref|XP_002327411.1| predicted protein [Populus trichocarpa] gi|222835965|gb|EEE74386.1| predicted protein [Populus trichocarpa]

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 171/261 (65%), Positives = 198/261 (75%), Gaps = 24/261 (9%)

Query: 49  GVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTS 108
           GVDAP+TQS   YL+LAL YG ILLYRRQ+LQVSWYWYLLLGFVDVQGN+L NKA+QF+S
Sbjct: 1   GVDAPLTQSSFNYLALALIYGSILLYRRQKLQVSWYWYLLLGFVDVQGNYLVNKAYQFSS 60

Query: 109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAG-GGGSR 167
           I+SVTLLDC  +   I  TW FLGTRY++WQL GA++CVLGLGL+LLSDA +A   GGS+
Sbjct: 61  ITSVTLLDCWTVAWVIALTWFFLGTRYTLWQLLGAAVCVLGLGLVLLSDAGVAHITGGSK 120

Query: 168 PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLES 227
           P+LGD LVI G IFFA+S VGEEF VKK  RVEVV MIGVYG LVS V+LS +ELKSLE+
Sbjct: 121 PVLGDFLVITGTIFFALSNVGEEFCVKKKGRVEVVTMIGVYGFLVSAVELSIVELKSLEA 180

Query: 228 VKWSTDI-----------------------LSGATMLILSVLTSDMWAVILRIFCYHQQV 264
           V WS DI                       LSGATM  LS+LT+DMWAV+ R+F YHQQV
Sbjct: 181 VAWSKDIVFAIAGYTLSMFLFYSLAPFVLKLSGATMFNLSILTADMWAVVFRVFFYHQQV 240

Query: 265 NWTYYLAFAAVLIGLIIYSTT 285
           +W Y+L+FA V IGLIIYS T
Sbjct: 241 DWLYFLSFAIVAIGLIIYSLT 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740095|emb|CBI30277.3| unnamed protein product [Vitis vinifera]

 Score =  299 bits (766), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 166/293 (56%), Positives = 210/293 (71%), Gaps = 23/293 (7%)

Query: 14  RSQMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL 73
           R++  LR  Y L LGQ+VSF +A SSF T+ + DLGV+ P+TQS   YL L L +G I L
Sbjct: 28  RNERLLRNAYALFLGQVVSFLVAFSSFFTSSVIDLGVNVPLTQSFFAYLCLVLVFGTIRL 87

Query: 74  YRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGT 133
            RRQ ++VSW WYL LGFVDVQGN+L  KA+Q++S +SVTLLDC  IP A++FTW+ LGT
Sbjct: 88  GRRQNIRVSWIWYLFLGFVDVQGNYLVKKAYQYSSATSVTLLDCWTIPWAMIFTWIVLGT 147

Query: 134 RYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLV 193
           RYS+ Q FGA+LCV GL  + LSDA   GGGGS+P+LGD LV+AG +F AMS VGEEF V
Sbjct: 148 RYSIRQFFGAALCVAGLASVFLSDAGAGGGGGSKPILGDTLVVAGTLFLAMSNVGEEFCV 207

Query: 194 KKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI------------------- 234
           KK D VEVV MIG +GLLVS  ++  +E ++L+S+KWS DI                   
Sbjct: 208 KKKDSVEVVAMIGAFGLLVSACEIYIMEFETLKSIKWSPDIILGLAGHVLSTFLFYTLVP 267

Query: 235 ----LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS 283
               LSGATML LS+LTSD+WAV++R++ YHQ+V+W YYL+FA + IGLIIYS
Sbjct: 268 FLLKLSGATMLSLSLLTSDLWAVVIRVYFYHQKVDWLYYLSFATITIGLIIYS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088093|ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor] gi|241945164|gb|EES18309.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor]

 Score =  290 bits (743), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 158/312 (50%), Positives = 204/312 (65%), Gaps = 32/312 (10%)

Query: 32  SFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGF 91
           +F++A SSFT+++I +LGVDAP+TQS   YL L L Y  I+L RRQ+LQ++WYWYL L F
Sbjct: 21  AFAMAASSFTSSLIANLGVDAPLTQSFFAYLLLTLVYVPIVLRRRQKLQIAWYWYLALAF 80

Query: 92  VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG 151
            DVQGN+L  KA+Q++ I+SVTLLDC  +   I+ TW  LGTRYS+WQ  GA  CV GL 
Sbjct: 81  FDVQGNYLVVKAYQYSYITSVTLLDCWTVVWVIILTWYALGTRYSLWQFVGAGTCVAGLA 140

Query: 152 LMLLSDAEMAG--GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYG 209
           L+LLSDAE       G  PLLGD+LVIAG + FA S VGEE+ VKK DRVEVV M+G++G
Sbjct: 141 LVLLSDAESPEEQDPGKMPLLGDVLVIAGTVGFAFSNVGEEYCVKKKDRVEVVAMLGLFG 200

Query: 210 LLVSVVQLSTLELKSLESVKWSTDI-----------------------LSGATMLILSVL 246
           LL+S+VQ+   E K LE+V WS  +                       +SGAT+  LS+L
Sbjct: 201 LLISIVQILIFERKGLEAVTWSPTMISLFAGFAVAIFIFYTITPFVLKMSGATLFNLSLL 260

Query: 247 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS---TTAKDLLPIPALENGNYDVQ 303
           TSDMWAV +R+  Y QQ+NW YYLAF  V IGLIIYS   +++ D        +     Q
Sbjct: 261 TSDMWAVAIRVLFYQQQINWLYYLAFTVVAIGLIIYSLNDSSSDD----ETAGSTEAPAQ 316

Query: 304 YQRLDDENMASR 315
           YQ+L  E+ ++R
Sbjct: 317 YQQLPIEDNSTR 328

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
TAIR|locus:2081197	363	AT3G59310 "AT3G59310" [Arabido	0.651	0.575	0.431	2.6e-61
TAIR|locus:2081262	333	AT3G59340 "AT3G59340" [Arabido	0.682	0.657	0.407	2.6e-61
TAIR|locus:2081212	339	AT3G59320 "AT3G59320" [Arabido	0.579	0.548	0.470	1.3e-59
DICTYBASE|DDB_G0287003	417	DDB_G0287003 "solute carrier f	0.604	0.465	0.356	1.7e-40
UNIPROTKB|Q5T1Q4	408	SLC35F1 "Solute carrier family	0.582	0.458	0.345	3.1e-37
MGI|MGI:2139810	408	Slc35f1 "solute carrier family	0.582	0.458	0.350	8.2e-37
UNIPROTKB|Q8IXU6	374	SLC35F2 "Solute carrier family	0.635	0.545	0.356	1.9e-35
MGI|MGI:1919272	375	Slc35f2 "solute carrier family	0.635	0.544	0.351	8.1e-35
WB|WBGene00022270	429	Y73E7A.3 [Caenorhabditis elega	0.747	0.559	0.307	1e-27
POMBASE|SPCC320.08	505	SPCC320.08 "membrane transport	0.607	0.386	0.266	1.6e-22

TAIR|locus:2081197 AT3G59310 "AT3G59310" [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
 Identities = 92/213 (43%), Positives = 135/213 (63%)

Query:    38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN 97
             + FT++ +   G++ P +Q  L Y+ LA+ YG I+LYRR  ++  WY+Y LL FVDV+ N
Sbjct:    30 NGFTSSELARKGINVPTSQCFLNYVLLAIVYGSIMLYRRSDIKAKWYYYFLLAFVDVEAN 89

Query:    98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSD 157
             FL  KA+Q+TS++SV LLDC AIPC +V TW +L T+Y + ++ G             SD
Sbjct:    90 FLVVKAYQYTSLTSVMLLDCWAIPCVLVLTWFYLKTKYRLMKISGVFICIVGVFMVVFSD 149

Query:   158 AEMAG--GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVV 215
                AG   GGS P+ GD LV+AGA  +A+S   EEFLVK  D VE++  +G +G ++S +
Sbjct:   150 VH-AGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFLVKNADTVELMTFLGFFGAIISAI 208

Query:   216 QLSTLELKSLESVKWSTDILSGATMLILSVLTS 248
             Q+S LE   L+++ WST  + G   + +S+LTS
Sbjct:   209 QVSILERDELKAIHWSTGAV-GFLAMAISILTS 240

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081262 AT3G59340 "AT3G59340" [Arabidopsis thaliana (taxid:3702)]

 Score = 452 (164.2 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
 Identities = 90/221 (40%), Positives = 134/221 (60%)

Query:    38 SSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN 97
             ++FT++ +   G++AP +Q+ L Y  LA+ YGGI+LYRR  ++  WY Y LL  VDV+GN
Sbjct:    33 NAFTSSELARKGINAPTSQTFLSYTLLAVVYGGIMLYRRPTIKGKWYHYFLLALVDVEGN 92

Query:    98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSD 157
             FL  KA Q+TSI+S+ LLDC AIPC +V TW+FL T+Y + ++ G             SD
Sbjct:    93 FLVVKANQYTSITSIMLLDCWAIPCVLVLTWMFLKTKYRLMKISGVFICIAGVVMVLFSD 152

Query:   158 AEMAG-GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQ 216
                    GGS P+ GD LV+AGA  +A+S   EEFLVK  D VE++  +G++G ++S +Q
Sbjct:   153 VHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNADTVELMTFMGLFGAIISAIQ 212

Query:   217 LSTLELKSLESVKWSTD-ILSGATMLILSVLTSDMWAVILR 256
             ++  E   L+++ WS D +       I   L   +  ++LR
Sbjct:   213 VAIFEQGELKAIHWSADAVFPFLRFAITMFLFYSLLPILLR 253

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081212 AT3G59320 "AT3G59320" [Arabidopsis thaliana (taxid:3702)]

 Score = 456 (165.6 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 89/189 (47%), Positives = 125/189 (66%)

Query:    49 GVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTS 108
             G+ AP +Q+ L Y+SLA+ YGGI+LYRR  ++V WY Y LL  VDV+ NFL  KAFQ TS
Sbjct:    42 GISAPTSQTFLGYVSLAIVYGGIMLYRRSAIKVKWYHYFLLAVVDVEANFLVVKAFQNTS 101

Query:   109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG--GGGS 166
             ++S+ LLDC AIPC +V TWVFL TRY + ++ G             SD   AG   GGS
Sbjct:   102 MTSIMLLDCWAIPCVLVLTWVFLKTRYRLMKISGVVICIVGVVMVVFSDVH-AGDRAGGS 160

Query:   167 RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLE 226
              P+ GD LVIAGA  +A+S V EEFLVK  D  E++  +G++G +++ +Q+S  E  ++ 
Sbjct:   161 NPVKGDFLVIAGATLYAVSNVTEEFLVKNADVTELMAFLGLFGAIIAAIQISIFERGAVR 220

Query:   227 SVKWSTDIL 235
             +++WST+ +
Sbjct:   221 AIQWSTEAI 229

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

DICTYBASE|DDB_G0287003 DDB_G0287003 "solute carrier family 35 member protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 320 (117.7 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
 Identities = 72/202 (35%), Positives = 116/202 (57%)

Query:    40 FTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---QRLQVSWYWYLLLGFVDVQG 96
             F+  ++   GV+ P TQS+L Y+ L + Y  +L+ R    + ++    ++  L  VD++ 
Sbjct:    47 FSQLLVKKYGVNIPTTQSLLNYILLCV-YLLVLVKRGVLWETIKTKSIYFAPLALVDLEA 105

Query:    97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXS 156
             N++  KA+Q+T+I+SV LLDC  IPC +V + +FL TR++   +               S
Sbjct:   106 NYIVVKAYQYTTITSVMLLDCFTIPCVVVLSRIFLKTRFTFVHIIAVLIALAGMAILVVS 165

Query:   157 D---AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVS 213
             D    E A GG S PLLGD L +A ++ +A+S VG+E  VKK DRV  + MIG+YG +  
Sbjct:   166 DIIEGESANGG-SNPLLGDFLCLASSVCYAISNVGQEATVKKYDRVTYLAMIGLYGSIFC 224

Query:   214 VVQLSTLELKSLESVKWSTDIL 235
              +Q++ LE   L ++ WS  ++
Sbjct:   225 GIQIAILERNELATMAWSGGVV 246

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q5T1Q4 SLC35F1 "Solute carrier family 35 member F1" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
 Identities = 68/197 (34%), Positives = 106/197 (53%)

Query:    47 DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLF 100
             D   + P+ QS L Y+ L L Y   L  R+        L+  W+ Y++LG +D++ N+L 
Sbjct:    87 DFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYMILGLIDLEANYLV 146

Query:   101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEM 160
              KA+Q+T+++S+ LLDC  IP  I+ +W FL  RY      G             +D  +
Sbjct:   147 VKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADV-L 205

Query:   161 AG---GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQL 217
              G   G G   L+GD+LV+ GA  + +S V EE++++ + RVE + MIG++G   S +QL
Sbjct:   206 VGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLSRVEFLGMIGLFGAFFSGIQL 265

Query:   218 STLELKSLESVKWSTDI 234
             + +E K L  V W   I
Sbjct:   266 AIMEHKELLKVPWDWQI 282

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2139810 Slc35f1 "solute carrier family 35, member F1" [Mus musculus (taxid:10090)]

 Score = 303 (111.7 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 69/197 (35%), Positives = 105/197 (53%)

Query:    47 DLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLF 100
             D   + P+ QS L Y+ L L Y   L  R+        L+  W+ Y++LG +D++ N+L 
Sbjct:    87 DFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAILRRRWWKYMILGLIDLEANYLV 146

Query:   101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEM 160
              KA+Q+T+++SV LLDC  IP  I+ +W FL  RY      G             +D  +
Sbjct:   147 VKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVHFIGIVVCILGMGCMVGADV-L 205

Query:   161 AG---GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQL 217
              G   G G   L+GD+LV+ GA  + +S V EE +++ + RVE + MIG++G   S +QL
Sbjct:   206 VGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLSRVEFLGMIGLFGAFFSGIQL 265

Query:   218 STLELKSLESVKWSTDI 234
             + +E K L  V W   I
Sbjct:   266 AIMEHKELLKVPWDWQI 282

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8IXU6 SLC35F2 "Solute carrier family 35 member F2" [Homo sapiens (taxid:9606)]

 Score = 309 (113.8 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
 Identities = 77/216 (35%), Positives = 117/216 (54%)

Query:    50 VDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLLGFVDVQGNFLFNKA 103
             V+ P+ QS + Y  L L Y  +L +R         L+  W+ Y+LLG  DV+ N++  +A
Sbjct:    69 VNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVILKRKWWKYILLGLADVEANYVIVRA 128

Query:   104 FQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG- 162
             +Q+T+++SV LLDC  IP  +  +W  L  RY V      +           +D  +AG 
Sbjct:   129 YQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIHFIAVAVCLLGVGTMVGADI-LAGR 187

Query:   163 --GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTL 220
                 GS  L+GDILV+ GA  +A+S V EE++VKK+ R E + M+G++G ++S +QL  +
Sbjct:   188 EDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIV 247

Query:   221 ELKSLESVKWSTDI--LSGATMLILSVLTSDMWAVI 254
             E K + S+ W   I  L  A  L +  L S M  VI
Sbjct:   248 EYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVI 283

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1919272 Slc35f2 "solute carrier family 35, member F2" [Mus musculus (taxid:10090)]

 Score = 302 (111.4 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
 Identities = 76/216 (35%), Positives = 116/216 (53%)

Query:    50 VDAPITQSVLCYLSLALAYGGILLYRR------QRLQVSWYWYLLLGFVDVQGNFLFNKA 103
             V+ P+ QS + Y  L L Y  +L ++       + L+  W+ Y LLG  DV+ N+L  +A
Sbjct:    69 VNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRA 128

Query:   104 FQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAG- 162
             +Q+T+++SV LLDC  IP  +  +W  L  RY V                  +D  +AG 
Sbjct:   129 YQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIHFIAVFVCLLGVGTMVGADI-LAGR 187

Query:   163 --GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTL 220
                 GS  L+GDILV+ GA  +A+S V EE++VKK+ R E + M+G++G ++S +QL  +
Sbjct:   188 EDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIV 247

Query:   221 ELKSLESVKWSTDI--LSGATMLILSVLTSDMWAVI 254
             E K +  ++W   I  L  A  L +  L S M  VI
Sbjct:   248 EYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVI 283

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00022270 Y73E7A.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 80/260 (30%), Positives = 139/260 (53%)

Query:    41 TTAVITDLGVDAPITQS-----VLCY---LSLALAY--GGILLYRRQRLQVSWYWYLLLG 90
             ++ ++ +  V+AP  Q+     +LC+   +SLA      G+++  R+R    W  YL+L 
Sbjct:    80 SSQLLVNQNVNAPAAQAFSNYFLLCFVYCISLACKNDENGLVVVLRKR---GWR-YLILA 135

Query:    91 FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXX 150
              +DV+ N++  KA+Q+T+++SV LLDC  IP  +  +W+FL  RY    + G +      
Sbjct:   136 IIDVEANYMIVKAYQYTNLTSVQLLDCATIPTVLFLSWLFLSVRYLASHILGVTICIIGI 195

Query:   151 XXXXXSDA---EMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGV 207
                  +DA   + A  GGS  +LGDIL +A A+ +A+  V EEFLVK+  R E + M+G+
Sbjct:   196 ACVIWADALGDKGALDGGSNKVLGDILCLAAAVMYAICNVAEEFLVKQHSRTEYLGMLGL 255

Query:   208 YGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILS--VLTSDMWAVILRIFCYHQQVN 265
             +G +VS VQ +  E ++L  + W   I+S   +   S  +  S +  V+ +       ++
Sbjct:   256 FGCIVSGVQTAVFEQEALSKIVWDGTIVSYFALFAFSMFIFYSLVTVVLQKTSALMFNLS 315

Query:   266 WTYYLAFAAVLIGLIIYSTT 285
              T    F ++L G+ ++  T
Sbjct:   316 -TLTADFYSLLFGIFMFKDT 334

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

POMBASE|SPCC320.08 SPCC320.08 "membrane transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 204 (76.9 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
 Identities = 55/206 (26%), Positives = 103/206 (50%)

Query:    53 PITQSVLCYLSLALAYGGILLYR---RQRLQVSWY--W-YLLLGFVDVQGNFLFNKAFQF 106
             P  Q+ L Y  L L Y    ++R   ++  ++ +   W Y++  F DV+GN+    A+Q+
Sbjct:   172 PAFQTFLVYALLTLVYTPYTVFRMGFKKYFEMIFRHGWKYIIFAFFDVEGNYFVVLAYQY 231

Query:   107 TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASXXXXXXXXXXXSDAEMAGGGGS 166
             T++ S +LLD  A    ++ +++FL  RY   Q+ G             SD    G   +
Sbjct:   232 TNMLSASLLDSWATVAVVILSFIFLKVRYHWSQILGVVACIGGLVLLVVSDVISRGDYSA 291

Query:   167 -RPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSL 225
               P LGD  +I GA  + +S   EE+   K+    V+  + +YG ++S++Q    +   L
Sbjct:   292 VNPGLGDGYMIIGATCYGVSNTLEEYFASKLPLYVVIGQLSLYGSIISIIQTFIFDRHHL 351

Query:   226 ESVKWSTDI---LSGATMLILSVLTS 248
              ++ W++++   L+G  +L++ +L S
Sbjct:   352 YTLHWTSEMGGYLAGF-ILVMFLLYS 376

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00021639001 SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (323 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	321
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	1e-79
pfam08449	303	pfam08449, UAA, UAA transporter family	0.003

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score =  245 bits (627), Expect = 1e-79
 Identities = 120/300 (40%), Positives = 180/300 (60%), Gaps = 31/300 (10%)

Query: 20  RTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR--- 76
           RTL  L LGQ++S  +  ++ T+  + + GV+AP  Q+ L Y  L L Y GIL +RR   
Sbjct: 11  RTLIGLALGQILSLCITGTATTSQYLAEKGVNAPAFQTFLNYALLFLVYTGILAFRRGEK 70

Query: 77  ---QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGT 133
                ++  W+ Y++L  +DV+ N+L  KA+Q+T+++SV LLDC AIP  +V +W FL  
Sbjct: 71  NLLVIIKRKWWKYIILALIDVEANYLVVKAYQYTNLTSVQLLDCWAIPVVLVLSWFFLKV 130

Query: 134 RYSVWQLFGASLCVLGLGLMLLSD--AEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEF 191
           RY    + G  +C+LG+  ++ SD  A     GGS P+LGDILV+AGA  +A+S V EEF
Sbjct: 131 RYRASHILGVVICILGVVCVVGSDVLAGRRAYGGSNPVLGDILVLAGATLYAVSNVTEEF 190

Query: 192 LVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDI----------------- 234
           LVKK+ R E + M+G++G ++S +Q +  E K+L  + W  +I                 
Sbjct: 191 LVKKLSRTEFLGMLGLFGAIISGIQTAIFERKALYKIHWDWEIGLLFAGFALCMFLLYSL 250

Query: 235 ------LSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD 288
                  + ATM  LS+LTSD W++++ IF +H +V+W Y+LAFA ++IGLIIYS    D
Sbjct: 251 MPILIKKTSATMFNLSLLTSDFWSLLIGIFLFHYKVSWLYFLAFATIIIGLIIYSMKETD 310

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 75  RRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTR 134
           + +  ++    Y+L+       + L N+A ++ S  +  +   C +   ++   +  G R
Sbjct: 56  KLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKR 115

Query: 135 YSVWQLFGASLCVLGLGLMLLSDAEMAGGGGS---RPLLGDILVIAGAIFF 182
           YS  Q   A L  LG+ +  L+ A+ +           +G I ++ GA+  
Sbjct: 116 YSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVG-IALLFGALLM 165

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	321
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
KOG2766	336	consensus Predicted membrane protein [Function unk	99.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.94
PRK15430	296	putative chloramphenical resistance permease RarD;	99.94
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.93
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.89
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.87
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.86
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.85
KOG2765	416	consensus Predicted membrane protein [Function unk	99.81
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.8
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.79
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.73
COG2962	293	RarD Predicted permeases [General function predict	99.71
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.68
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.65
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.64
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.63
KOG1581	327	consensus UDP-galactose transporter related protei	99.6
KOG1580	337	consensus UDP-galactose transporter related protei	99.57
COG2510	140	Predicted membrane protein [Function unknown]	99.51
KOG1582	367	consensus UDP-galactose transporter related protei	99.5
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.35
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.35
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.3
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.3
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.2
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.19
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.16
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.07
COG2510	140	Predicted membrane protein [Function unknown]	98.92
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.9
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.8
PRK11272	292	putative DMT superfamily transporter inner membran	98.78
PLN00411	358	nodulin MtN21 family protein; Provisional	98.78
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.77
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.75
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.67
PRK11689	295	aromatic amino acid exporter; Provisional	98.59
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.59
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.57
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.57
PRK13499	345	rhamnose-proton symporter; Provisional	98.53
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.51
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.48
PRK15430	296	putative chloramphenical resistance permease RarD;	98.47
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.46
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.43
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.35
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.33
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.22
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.14
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.08
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.95
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.91
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.89
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.8
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.7
COG2076	106	EmrE Membrane transporters of cations and cationic	97.67
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.66
PRK11431	105	multidrug efflux system protein; Provisional	97.57
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.55
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.54
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.44
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.43
COG2962	293	RarD Predicted permeases [General function predict	97.33
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.19
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.17
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.12
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.93
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.93
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.85
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.76
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.74
PRK11431	105	multidrug efflux system protein; Provisional	96.62
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.57
PF13536	113	EmrE: Multidrug resistance efflux transporter	96.57
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.53
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.53
COG2076	106	EmrE Membrane transporters of cations and cationic	96.32
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.19
KOG1580	337	consensus UDP-galactose transporter related protei	96.12
PRK13499	345	rhamnose-proton symporter; Provisional	95.88
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.82
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.77
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.59
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.52
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.14
KOG1581	327	consensus UDP-galactose transporter related protei	94.95
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	94.6
KOG2765	416	consensus Predicted membrane protein [Function unk	93.28
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	93.26
KOG2922	335	consensus Uncharacterized conserved protein [Funct	93.05
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.5
PRK02237	109	hypothetical protein; Provisional	90.57
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	89.07
PF12811	274	BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539	88.75
KOG4831	125	consensus Unnamed protein [Function unknown]	88.56
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	86.73
PRK02237	109	hypothetical protein; Provisional	86.12
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	85.94
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	85.04
KOG1582	367	consensus UDP-galactose transporter related protei	80.57

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=100.00  E-value=4.4e-37  Score=273.67  Aligned_cols=277  Identities=40%  Similarity=0.745  Sum_probs=247.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccc------cchhhHHHHHH
Q 020761           16 QMALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR------LQVSWYWYLLL   89 (321)
Q Consensus        16 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~------~~~~~~~~~~~   89 (321)
                      ..+|+.++++++++++|+++.+++.....+.+.+...|..+++..+....++..+...+|++.      .+++|++++++
T Consensus         6 ~~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~ll   85 (334)
T PF06027_consen    6 LFTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLL   85 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHH
Confidence            367888999999999999999999999999999998899999999999888888776655432      57789999999


Q ss_pred             HHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccccccc--CCCCCc
Q 020761           90 GFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMA--GGGGSR  167 (321)
Q Consensus        90 g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~--~~~~~~  167 (321)
                      +++++.+|++.+.|++|++.+.++++.++..+++++++++++|||+++.|++|++++++|+.++...|...+  +..+++
T Consensus        86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~  165 (334)
T PF06027_consen   86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSN  165 (334)
T ss_pred             HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCc
Confidence            999999999999999999999999999999999999999999999999999999999999999999886422  123467


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhHH------------
Q 020761          168 PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIL------------  235 (321)
Q Consensus       168 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------------  235 (321)
                      ...|++++++|+++||+++++.|+..|+.+..++.++..+++.++..+....+|..++....|.+...            
T Consensus       166 ~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~  245 (334)
T PF06027_consen  166 PILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFL  245 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999998888888887777666655432            


Q ss_pred             -----------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCCCC
Q 020761          236 -----------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPI  292 (321)
Q Consensus       236 -----------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  292 (321)
                                 .+|...|++.++..+++++++++++|+++++..++|.++|++|.++|+..++++.++
T Consensus       246 ~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~  313 (334)
T PF06027_consen  246 FYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEA  313 (334)
T ss_pred             HHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccccc
Confidence                       777888888889999999999999999999999999999999999999887765544

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=2.5e-29  Score=228.58  Aligned_cols=271  Identities=15%  Similarity=0.134  Sum_probs=204.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcc--cc-c---chhhHHHHHHHHH
Q 020761           19 LRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR--QR-L---QVSWYWYLLLGFV   92 (321)
Q Consensus        19 ~~~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~-~---~~~~~~~~~~g~~   92 (321)
                      ++..+....++++-+.-.+.....+...+.+. +|+.+.++|+.+++++++++.+.++  ++ .   ++++..+.+.|++
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~-~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGL-NIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL   87 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCC-CccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence            33445555556666677777777777777788 9999999999999999988765432  11 2   3455667778888


Q ss_pred             HHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHH------hhcchhHHHHHHHHHHHHhhhhhccccccc------
Q 020761           93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVF------LGTRYSVWQLFGASLCVLGLGLMLLSDAEM------  160 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~------l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~------  160 (321)
                      +...+.+++.|++|+++++++++.+++|+++.++++++      +|||+++++++|++++++|+.++...+...      
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~  167 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASS  167 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence            74446789999999999999999999999999999999      699999999999999999999987532100      


Q ss_pred             -----------cCCC-CCcchhhhHHHHHHHHHHHHHHHHHHHhhccCChh-hHHHHHHHHHHHHHHHHHHhhccccccc
Q 020761          161 -----------AGGG-GSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRV-EVVCMIGVYGLLVSVVQLSTLELKSLES  227 (321)
Q Consensus       161 -----------~~~~-~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~  227 (321)
                                 +... ..+...|+.++++++++||+|.+++|+..+++++. ..++++..++.+...++....+..+.+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~  247 (358)
T PLN00411        168 PPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV  247 (358)
T ss_pred             cccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccc
Confidence                       0001 11234699999999999999999999998888554 5566777766666645555444321111


Q ss_pred             --ccchh---hHH-------------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheee
Q 020761          228 --VKWST---DIL-------------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  283 (321)
Q Consensus       228 --~~~~~---~~~-------------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  283 (321)
                        ..|..   .++                   .++..+++..+++|+++++++++++||++++.+++|+++|+.|+++..
T Consensus       248 ~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~  327 (358)
T PLN00411        248 WIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM  327 (358)
T ss_pred             ceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence              11110   000                   778888888889999999999999999999999999999999999988


Q ss_pred             ccCCCCC
Q 020761          284 TTAKDLL  290 (321)
Q Consensus       284 ~~~~~~~  290 (321)
                      +.+++|.
T Consensus       328 ~~~~~~~  334 (358)
T PLN00411        328 WGKANEE  334 (358)
T ss_pred             hhhhhhh
Confidence            7665543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=4.8e-27  Score=210.03  Aligned_cols=254  Identities=13%  Similarity=0.115  Sum_probs=186.4

Q ss_pred             HHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccccchhhHHHHHHHHHHHHH-HHHHHHhhhc
Q 020761           28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKAFQF  106 (321)
Q Consensus        28 ~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~  106 (321)
                      ..+.+.+.|+++++..|...+++ +|..+.++|+.++++++.++..  +++.+++++...+.+.++... +.+++.+++|
T Consensus         8 ~~l~a~~~Wg~~~~~~k~~~~~~-~P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~   84 (295)
T PRK11689          8 IGLIAILLWSTMVGLIRGVSESL-GPVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVSYEICLALSLGY   84 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccC-ChHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            35777888999999999998888 9999999999999998876532  222233333455555555544 6667777754


Q ss_pred             ----chhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccC----CCCCcchhhhHHHHHH
Q 020761          107 ----TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAG----GGGSRPLLGDILVIAG  178 (321)
Q Consensus       107 ----~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~----~~~~~~~~G~~l~l~a  178 (321)
                          .++++++++.+++|+++.+++++++|||++++++++++++++|+.++..++...+.    ....+...|+++++++
T Consensus        85 ~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  164 (295)
T PRK11689         85 ANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIG  164 (295)
T ss_pred             hhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHH
Confidence                57788899999999999999999999999999999999999999999875431010    0111335699999999


Q ss_pred             HHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccc--cccccchhhHH------------------HhH
Q 020761          179 AIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKS--LESVKWSTDIL------------------SGA  238 (321)
Q Consensus       179 a~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~------------------~~a  238 (321)
                      +++||.|.++.||..++.++.....   ..+.+....+....+...  .+...|.....                  .++
T Consensus       165 a~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a  241 (295)
T PRK11689        165 AFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNM  241 (295)
T ss_pred             HHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCH
Confidence            9999999999999987777654322   223333312222222111  11111211111                  677


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          239 TMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       239 ~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                      ...+...+++|+++++++++++||++++.+++|+++|+.|+++....++
T Consensus       242 ~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        242 TLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            7888888899999999999999999999999999999999988765543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=1.8e-26  Score=206.05  Aligned_cols=256  Identities=14%  Similarity=0.091  Sum_probs=199.9

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhccc--ccchhhHHHHHHHHHHHHH-HH
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--RLQVSWYWYLLLGFVDVQG-NF   98 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~~~~~~~~~~~~g~~~~~~-~~   98 (321)
                      ...+++..+...++|+++++..|...++. +|..++++|+.+++++++++...+++  +.++++......|.++... +.
T Consensus         6 ~~~~~~~~~~~~~iWg~~~~~~K~~~~~~-~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272          6 LLPLFGALFALYIIWGSTYLVIRIGVESW-PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            34567777888899999999999887777 99999999999999998887654432  3455677677788776444 77


Q ss_pred             HHHHhh-hcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHH
Q 020761           99 LFNKAF-QFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIA  177 (321)
Q Consensus        99 ~~~~al-~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~  177 (321)
                      +++.+. ++++++.++++.++.|+++.+++++ +|||++++++++++++++|+.++...+.     . +....|++++++
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-----~-~~~~~G~l~~l~  157 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-----L-SGNPWGAILILI  157 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-----c-ccchHHHHHHHH
Confidence            888888 9999999999999999999999986 6999999999999999999998865221     1 234579999999


Q ss_pred             HHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhh-cccc-c--ccccchhhHH------------------
Q 020761          178 GAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTL-ELKS-L--ESVKWSTDIL------------------  235 (321)
Q Consensus       178 aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~--~~~~~~~~~~------------------  235 (321)
                      ++++||.+.+..||..++ ++...+.+....+.... .+.... +... .  +...|.....                  
T Consensus       158 a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~  235 (292)
T PRK11272        158 ASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVL-LIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLR  235 (292)
T ss_pred             HHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHH-HHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999997644 44555667777777766 333322 2211 1  1112322111                  


Q ss_pred             -HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          236 -SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       236 -~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                       .++...+...+++|+++++++++++||++++.+++|+.+++.|+++.++.++
T Consensus       236 ~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        236 NVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence             6677777788899999999999999999999999999999999998876544

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.96  E-value=2.3e-30  Score=214.10  Aligned_cols=273  Identities=43%  Similarity=0.833  Sum_probs=246.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccccchhhHHHHHHHHHHHHHH
Q 020761           18 ALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGN   97 (321)
Q Consensus        18 ~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   97 (321)
                      .||.++++.+++.+++++.++++....++.++...|..+++..+...+++..++..+|++-.+..|+.|++++++++-+|
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEaN   92 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEAN   92 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeeccc
Confidence            67789999999999999999999999999998889999999999999999999999888878888999999999999999


Q ss_pred             HHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccccc-ccCCCCCcchhhhHHHH
Q 020761           98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAGGGGSRPLLGDILVI  176 (321)
Q Consensus        98 ~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~-~~~~~~~~~~~G~~l~l  176 (321)
                      ++...|.||++...++++.+-..+.+.+++|+|+|.|.++.++.|+++|++|+.+++..|.+ ++.+.+++..+|+.+.+
T Consensus        93 y~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi  172 (336)
T KOG2766|consen   93 YFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVI  172 (336)
T ss_pred             EEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999976 45556778899999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhHH---------------------
Q 020761          177 AGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIL---------------------  235 (321)
Q Consensus       177 ~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------------------  235 (321)
                      ++|-+||+.++..+.+.|+.|..+.+....++|+++..+. ..++........|.+.+.                     
T Consensus       173 ~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~MFllYsl~pil~k  251 (336)
T KOG2766|consen  173 AGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALTMFLLYSLAPILIK  251 (336)
T ss_pred             ecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHHHHHHHHhhHHhee
Confidence            9999999999999999999999999999999999999777 667777766667754332                     


Q ss_pred             -HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCCCCC
Q 020761          236 -SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLPIP  293 (321)
Q Consensus       236 -~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~  293 (321)
                       .+++..|++.+++..|+++.  ..||-..+|...+..+.+..|.++|..+++.+++.+
T Consensus       252 ~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~e~r  308 (336)
T KOG2766|consen  252 TNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEEELR  308 (336)
T ss_pred             cCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcHhhc
Confidence             77888888888999999988  567777999999999999999999977766555443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.95  E-value=1.9e-26  Score=207.02  Aligned_cols=239  Identities=11%  Similarity=0.090  Sum_probs=189.7

Q ss_pred             HHHhcCCChhHHHHHHHHHHHHHHHHHHhh---hc-ccccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCc
Q 020761           44 VITDLGVDAPITQSVLCYLSLALAYGGILL---YR-RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCA  119 (321)
Q Consensus        44 ~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~---~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~  119 (321)
                      |...+++.+|...++.|+.++.+.+.+...   ++ ++..+++++..+..|+++.....+.+.+++|++++.++++.++.
T Consensus        22 K~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~  101 (302)
T TIGR00817        22 KKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAME  101 (302)
T ss_pred             HHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcc
Confidence            444456668999999999998877665421   12 22346688888999999766688999999999999999999999


Q ss_pred             hHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhc--cCC
Q 020761          120 IPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK--KID  197 (321)
Q Consensus       120 pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~--~~~  197 (321)
                      |+++++++++++|||++++++.+++++++|+.+....+       .+....|++++++++++|+++.+..||..+  +.|
T Consensus       102 Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~  174 (302)
T TIGR00817       102 PFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD  174 (302)
T ss_pred             hHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence            99999999999999999999999999999998764321       123457999999999999999999999988  789


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHh-hccccccc---------cc----chhhHH-------------------HhHHHHHHH
Q 020761          198 RVEVVCMIGVYGLLVSVVQLST-LELKSLES---------VK----WSTDIL-------------------SGATMLILS  244 (321)
Q Consensus       198 ~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~---------~~----~~~~~~-------------------~~a~~~~~~  244 (321)
                      +.+.+.++...+++.. .|... .+......         ..    |.....                   .++...++.
T Consensus       175 ~~~~~~~~~~~~~~~l-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~  253 (302)
T TIGR00817       175 KTNLYAYISIMSLFLL-SPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVG  253 (302)
T ss_pred             cccHHHHHHHHHHHHH-HHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHH
Confidence            9999999999998887 55433 33211000         00    100000                   566667777


Q ss_pred             HHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCC
Q 020761          245 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL  290 (321)
Q Consensus       245 ~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  290 (321)
                      .+++|+++++++++++||++++.+++|+++++.|++++++.+++|+
T Consensus       254 ~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       254 NCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             hhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence            7789999999999999999999999999999999999997665443

specificities overlap.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.95  E-value=1e-25  Score=201.91  Aligned_cols=250  Identities=15%  Similarity=0.134  Sum_probs=181.9

Q ss_pred             HHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccccchhhHHHHHHHHHHHHH-HHHHHHhhhc-
Q 020761           29 QLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKAFQF-  106 (321)
Q Consensus        29 ~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~-  106 (321)
                      .+++.++|+++++..|...++. +|..+.++|+.++++.+.++..+++    .+++.....|...... ..+++.+++| 
T Consensus         9 ~l~~~~~Wg~~~~~~k~~~~~~-~p~~~~~~R~~~a~~~l~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~   83 (299)
T PRK11453          9 ALLVVVVWGLNFVVIKVGLHNM-PPLMLAGLRFMLVAFPAIFFVARPK----VPLNLLLGYGLTISFGQFAFLFCAINFG   83 (299)
T ss_pred             HHHHHHHHhhhHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHhcCCC----CchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            5677899999999999887787 9999999999998776655443222    2233344445554444 5577889988 


Q ss_pred             chhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHH
Q 020761          107 TSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSY  186 (321)
Q Consensus       107 ~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~  186 (321)
                      .+++.++++.+++|+++.+++++++|||++++++++++++++|+.++..++.   + ..+.+..|++++++++++|+.|.
T Consensus        84 ~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~---~-~~~~~~~G~~l~l~aal~~a~~~  159 (299)
T PRK11453         84 MPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL---N-GQHVAMLGFMLTLAAAFSWACGN  159 (299)
T ss_pred             CCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC---C-CcchhHHHHHHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999999999999886432   1 11223579999999999999999


Q ss_pred             HHHHHhhccCChh---hHHHHHHHHHHHHHHHHHHhhcccc--------cccccchhhHH-------------------H
Q 020761          187 VGEEFLVKKIDRV---EVVCMIGVYGLLVSVVQLSTLELKS--------LESVKWSTDIL-------------------S  236 (321)
Q Consensus       187 v~~k~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~-------------------~  236 (321)
                      ++.||..++.+..   ....+....+.+.........+.+.        .+...|.....                   .
T Consensus       160 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~  239 (299)
T PRK11453        160 IFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRY  239 (299)
T ss_pred             HHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999986655433   2334444444332212112222211        11111221111                   4


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          237 GATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       237 ~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                      ++...+...+++|+++.+++++++||++++.+++|+++|+.|+++..+.++
T Consensus       240 ~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        240 ETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            556666777789999999999999999999999999999999998776554

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=9.2e-26  Score=198.36  Aligned_cols=236  Identities=17%  Similarity=0.096  Sum_probs=186.9

Q ss_pred             HhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccccchhhHHHHHHHHHHHHH-HHHHHHhhhcchhhHHHH
Q 020761           36 ALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG-NFLFNKAFQFTSISSVTL  114 (321)
Q Consensus        36 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~  114 (321)
                      ||++++..|...++..+|....+.|++.+.+.+.+...++  +.++++++++..|.++... +.++++|++|++++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i   78 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL   78 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence            7788888888765555889999999988888877665544  4555667788888877666 889999999999999999


Q ss_pred             hhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhc
Q 020761          115 LDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVK  194 (321)
Q Consensus       115 i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~  194 (321)
                      +.++.|+++.+++++++|||++++++.+++++++|+.++...+.      .+.+..|+.+++.++++|+.+.+..|+..+
T Consensus        79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~  152 (260)
T TIGR00950        79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN------LSINPAGLLLGLGSGISFALGTVLYKRLVK  152 (260)
T ss_pred             HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc------ccccHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence            99999999999999999999999999999999999999875321      224468999999999999999999999987


Q ss_pred             cCChh--hHHHHHHHHHHHHHHHHHHhhcccccc--cccchhhHH-------------------HhHHHHHHHHHHHHHH
Q 020761          195 KIDRV--EVVCMIGVYGLLVSVVQLSTLELKSLE--SVKWSTDIL-------------------SGATMLILSVLTSDMW  251 (321)
Q Consensus       195 ~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~-------------------~~a~~~~~~~~~~pv~  251 (321)
                      +.++.  ....+.+.++.++. .+.........+  ...|.....                   .++...+...+++|++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~  231 (260)
T TIGR00950       153 KEGPELLQFTGWVLLLGALLL-LPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLV  231 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHH-HHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence            77644  44446677777766 554433322211  112321111                   6677777778899999


Q ss_pred             HHHHHHHHhcccchHHHHhHHHHHhhhhh
Q 020761          252 AVILRIFCYHQQVNWTYYLAFAAVLIGLI  280 (321)
Q Consensus       252 ~~~~~~~~~~e~~~~~~~~G~~li~~g~~  280 (321)
                      +++++++++||++++.++.|+.+++.|+.
T Consensus       232 ~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       232 ALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999863

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.94  E-value=9.3e-25  Score=195.11  Aligned_cols=255  Identities=15%  Similarity=0.081  Sum_probs=189.7

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcc-cccchhhHHHHHHHHHHHHHHHHH
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR-QRLQVSWYWYLLLGFVDVQGNFLF  100 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~  100 (321)
                      .+++.. .+++.+.|+++....|...++. +|..+.++|+++++++++++..+++ +..+++++..+..|.+....+.++
T Consensus        11 ~~~~~~-~~la~~~~~~~~~~~K~~~~~~-~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   88 (293)
T PRK10532         11 WLPILL-LLIAMASIQSGASLAKSLFPLV-GAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLF   88 (293)
T ss_pred             chHHHH-HHHHHHHHHhhHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            344444 5677777777777777777677 9999999999999988887654333 234556777778888766668889


Q ss_pred             HHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHH
Q 020761          101 NKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAI  180 (321)
Q Consensus       101 ~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~  180 (321)
                      +++++|+|++.++++.++.|+++.+++    +||+++.  .++.++++|+.++...+.  +  .++.+..|+++++++++
T Consensus        89 ~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~--~--~~~~~~~G~ll~l~aa~  158 (293)
T PRK10532         89 YLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQ--D--VSHVDLTGAALALGAGA  158 (293)
T ss_pred             HHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCC--C--cccCChHHHHHHHHHHH
Confidence            999999999999999999999999887    3666544  456778999998875332  1  12234579999999999


Q ss_pred             HHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccc--cccchhhHH-------------------HhHH
Q 020761          181 FFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLE--SVKWSTDIL-------------------SGAT  239 (321)
Q Consensus       181 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~-------------------~~a~  239 (321)
                      +||.|.+..||..++.++... .+...+++++. .+....+....+  ...|.....                   .++.
T Consensus       159 ~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~  236 (293)
T PRK10532        159 CWAIYILSGQRAGAEHGPATV-AIGSLIAALIF-VPIGALQAGEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTR  236 (293)
T ss_pred             HHHHHHHHHHHHhccCCchHH-HHHHHHHHHHH-HHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence            999999999999877777665 45555666555 444443322111  111211111                   7778


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCC
Q 020761          240 MLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL  290 (321)
Q Consensus       240 ~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  290 (321)
                      ..+...+++|+++.+++++++||++++.+++|+.+|+.|++...++.+++.
T Consensus       237 ~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~  287 (293)
T PRK10532        237 TFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREP  287 (293)
T ss_pred             HHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            888888899999999999999999999999999999999999987665443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.94  E-value=5e-25  Score=197.15  Aligned_cols=250  Identities=15%  Similarity=0.079  Sum_probs=175.4

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhccc--c----c-chhhHHHHHHHHHH
Q 020761           21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ--R----L-QVSWYWYLLLGFVD   93 (321)
Q Consensus        21 ~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~----~-~~~~~~~~~~g~~~   93 (321)
                      ..+|.+.. +.+.+.|+.+....|.. ++. +|.++.++|+.++.+++.++...+++  .    . +++.......+.++
T Consensus         6 ~~~g~~~~-l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (296)
T PRK15430          6 TRQGVLLA-LAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVL   82 (296)
T ss_pred             hhhHHHHH-HHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHH
Confidence            34666554 55566677766666765 466 99999999999998877766543221  1    1 11111233455555


Q ss_pred             HHH-HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhh
Q 020761           94 VQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGD  172 (321)
Q Consensus        94 ~~~-~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~  172 (321)
                      ... +.++++|++++|+++++++.++.|+++++++++++|||++++++.+++++++|+.++..++.       +.    .
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------~~----~  151 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------SL----P  151 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------Cc----c
Confidence            555 88999999999999999999999999999999999999999999999999999999875321       11    2


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCC--hhhHHHHHHHHHHHHHHHHHHhhcccccccccch--h-hHH------------
Q 020761          173 ILVIAGAIFFAMSYVGEEFLVKKID--RVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWS--T-DIL------------  235 (321)
Q Consensus       173 ~l~l~aa~~~a~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~-~~~------------  235 (321)
                      +++++++++||.|.+..||..++..  ......+...++.+.. .+............++.  . ...            
T Consensus       152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~  230 (296)
T PRK15430        152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL-FAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCF  230 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH-HHHccCCcccccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            5688899999999999998753221  2233344444443332 22111111111111121  1 110            


Q ss_pred             ------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeecc
Q 020761          236 ------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  285 (321)
Q Consensus       236 ------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  285 (321)
                            .++...+...+++|+++++++++++||++++.+++|+++|+.|+.+....
T Consensus       231 ~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        231 TAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                  77788888888999999999999999999999999999998887766543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.93  E-value=1.2e-23  Score=192.03  Aligned_cols=234  Identities=15%  Similarity=0.136  Sum_probs=182.1

Q ss_pred             HHHhcCCChhHHHHHHHHHHHHHHHHHHhhh--cc-cc---cchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhc
Q 020761           44 VITDLGVDAPITQSVLCYLSLALAYGGILLY--RR-QR---LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDC  117 (321)
Q Consensus        44 ~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~-~~---~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~  117 (321)
                      |...+.++.|..++.+|++++.+++..+...  ++ ++   .+.+++..+..|+++...+...+.|+++++++.++++.+
T Consensus        69 K~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika  148 (350)
T PTZ00343         69 KLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKA  148 (350)
T ss_pred             HHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence            4444567339999999999997766544322  11 21   234677888999999888777789999999999999999


Q ss_pred             CchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhccCC
Q 020761          118 CAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID  197 (321)
Q Consensus       118 ~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~  197 (321)
                      +.|+++++++++++|||++++++.+++++++|+.+....+.       +.+..|++++++|+++++++.+..|+..++.+
T Consensus       149 ~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~  221 (350)
T PTZ00343        149 AEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKS  221 (350)
T ss_pred             hhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999876332       23467999999999999999999999887543


Q ss_pred             -------hhhHHHHHHHHHHHHHHHHHHh-hccccc---------ccccchh--h---HH-------------------H
Q 020761          198 -------RVEVVCMIGVYGLLVSVVQLST-LELKSL---------ESVKWST--D---IL-------------------S  236 (321)
Q Consensus       198 -------~~~~~~~~~~~~~~~~~i~~~~-~~~~~~---------~~~~~~~--~---~~-------------------~  236 (321)
                             +.....+....++++. +|... .|....         +...+..  .   ++                   .
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~l~~-lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~  300 (350)
T PTZ00343        222 EIGENLTASNIYMLLTLIASLIS-LPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKV  300 (350)
T ss_pred             cccccCCHHHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence                   4445555577788777 55543 432110         0001110  0   00                   6


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeecc
Q 020761          237 GATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  285 (321)
Q Consensus       237 ~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  285 (321)
                      ++...++...++|+++++++++++||++++.+++|.++++.|+++|++.
T Consensus       301 s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        301 NQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             chhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            6777778888999999999999999999999999999999999999864

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.89  E-value=5.7e-22  Score=176.20  Aligned_cols=246  Identities=14%  Similarity=0.095  Sum_probs=163.7

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhc-----ccccchhhHHHHHHHHH-HHHHHH
Q 020761           25 LLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR-----RQRLQVSWYWYLLLGFV-DVQGNF   98 (321)
Q Consensus        25 ~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~g~~-~~~~~~   98 (321)
                      +++.++.++.+...+...++...++  ++.  .+++....++++.++...+     +++.+++++.....+.+ +...+.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE--PDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch--hHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            3455556666666677777666542  443  3666666676776665432     22233444445455554 444588


Q ss_pred             HHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHH
Q 020761           99 LFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAG  178 (321)
Q Consensus        99 ~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~a  178 (321)
                      ++++|+++.++++++++.++.|+++.+++++++|||+++++++|+.+++.|+.++..++.   .   ..+..|+.+++++
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~---~---~~~~~g~~~~l~a  152 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF---A---QHRRKAYAWALAA  152 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc---c---ccchhHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999876432   1   1234688899999


Q ss_pred             HHHHHHHHHHHHHhhccCChhhH----HHHHHHHH-HHHHHHHHHhhcccccccc--cchhhHH----------------
Q 020761          179 AIFFAMSYVGEEFLVKKIDRVEV----VCMIGVYG-LLVSVVQLSTLELKSLESV--KWSTDIL----------------  235 (321)
Q Consensus       179 a~~~a~~~v~~k~~~~~~~~~~~----~~~~~~~~-~~~~~i~~~~~~~~~~~~~--~~~~~~~----------------  235 (321)
                      +++|+.|.+..|+..++.++...    ..+..... ..+. ......+.......  .+.....                
T Consensus       153 al~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~l~~~a  231 (281)
T TIGR03340       153 ALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFL-LLYLKRHGRSMFPYARQILPSATLGGLMIGGAYALVLWA  231 (281)
T ss_pred             HHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHH-HHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999887555444322    22222222 1111 11111111111111  1111111                


Q ss_pred             ---HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhhe
Q 020761          236 ---SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLII  281 (321)
Q Consensus       236 ---~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l  281 (321)
                         .++...+...+++|+++.+++++++||+++..+++|+.+++.|+++
T Consensus       232 l~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       232 MTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence               2222222233378999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.87  E-value=1.7e-19  Score=160.62  Aligned_cols=256  Identities=22%  Similarity=0.252  Sum_probs=179.6

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcc---cccchhhHHHHHHHHHHHHH-HH
Q 020761           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---QRLQVSWYWYLLLGFVDVQG-NF   98 (321)
Q Consensus        23 ~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~-~~   98 (321)
                      .+.... +.+.+.|+......+...++..++....+.|.....+...+...+++   ++.+++++...+.+.+.... +.
T Consensus         7 ~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (292)
T COG0697           7 LGLLAL-LLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFL   85 (292)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence            333443 33336677766666665555436666667799888887444333322   22222333455556555555 89


Q ss_pred             HHHHhhhcchhhHHHHhhcCchHHHHHHHH-HHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHH
Q 020761           99 LFNKAFQFTSISSVTLLDCCAIPCAIVFTW-VFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIA  177 (321)
Q Consensus        99 ~~~~al~~~~~~~~~~i~~~~pi~~~ils~-l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~  177 (321)
                      +++.++++++++.++++.++.|+++.++++ +++|||++++++.++.+++.|+.++..++..++   .. ...|++++++
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~---~~-~~~g~~~~l~  161 (292)
T COG0697          86 LLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG---IL-SLLGLLLALA  161 (292)
T ss_pred             HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch---hH-HHHHHHHHHH
Confidence            999999999999999999999999999997 667999999999999999999999998664111   11 5689999999


Q ss_pred             HHHHHHHHHHHHHHhhccCChhhHHH-HHHHHHHHHHHHHHHhhccc-ccccccchhhHH-------------------H
Q 020761          178 GAIFFAMSYVGEEFLVKKIDRVEVVC-MIGVYGLLVSVVQLSTLELK-SLESVKWSTDIL-------------------S  236 (321)
Q Consensus       178 aa~~~a~~~v~~k~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~-------------------~  236 (321)
                      +++++|++.+..|+.. +.++..... +... +......+....+.. ......|.....                   .
T Consensus       162 a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~  239 (292)
T COG0697         162 AALLWALYTALVKRLS-RLGPVTLALLLQLL-LALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLL  239 (292)
T ss_pred             HHHHHHHHHHHHHHhc-CCChHHHHHHHHHH-HHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999987 556666555 4444 222222333332222 111111221111                   4


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeecc
Q 020761          237 GATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  285 (321)
Q Consensus       237 ~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  285 (321)
                      ++...+...+++|+++++++++++||+++..+++|+.+++.|+.+...+
T Consensus       240 ~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         240 GASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            5555555557899999999999999999999999999999999998866

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.86  E-value=7.5e-23  Score=170.78  Aligned_cols=261  Identities=16%  Similarity=0.234  Sum_probs=193.3

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhccccc---chhhHHHHHHHHHHHHHHHH
Q 020761           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRL---QVSWYWYLLLGFVDVQGNFL   99 (321)
Q Consensus        23 ~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~   99 (321)
                      +|+++..+. ...-.+.++..+..  +. +|.++.-.|++.-.++-.+...+++...   +....++++.|+.|..+.++
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~--e~-~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvml  113 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVL--EN-DPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVML  113 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhh--cc-ChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHH
Confidence            455554444 44445556666655  33 7888888887776666666555443221   11223467889999999999


Q ss_pred             HHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccccc-ccCC------CCCcchhhh
Q 020761          100 FNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-MAGG------GGSRPLLGD  172 (321)
Q Consensus       100 ~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~-~~~~------~~~~~~~G~  172 (321)
                      .|||++|.+.+++.++.++.|.+|.+++|.++|||+++.+.++..+.+.|+++++.+... |+.+      ..+.+..|.
T Consensus       114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt  193 (346)
T KOG4510|consen  114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGT  193 (346)
T ss_pred             HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCch
Confidence            999999999999999999999999999999999999999999999999999999987753 2221      113456789


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccccc--cchhhHH------H--------
Q 020761          173 ILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESV--KWSTDIL------S--------  236 (321)
Q Consensus       173 ~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~------~--------  236 (321)
                      ..++.++++-|--.++.|++.|+.|....+.|..+.+++...+.....+.-.+|..  +|...+.      .        
T Consensus       194 ~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfgfigQIllTm~  273 (346)
T KOG4510|consen  194 VAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFGFIGQILLTMG  273 (346)
T ss_pred             HHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhhhHHHHHHHHH
Confidence            99999999999888999999999998888888888888877555554443334432  2221110      1        


Q ss_pred             ----hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          237 ----GATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       237 ----~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                          -+-..++.-++..+++.+|.+++||+.||++.|.|+++|+.+.+.....+.
T Consensus       274 lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  274 LQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             hhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence                111122333468999999999999999999999999999999887765553

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.85  E-value=3.2e-19  Score=160.14  Aligned_cols=238  Identities=19%  Similarity=0.238  Sum_probs=192.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHH
Q 020761           52 APITQSVLCYLSLALAYGGILLYR--RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV  129 (321)
Q Consensus        52 ~p~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l  129 (321)
                      .|..+++.++....+...+.....  +++.+.+++.+...+++......+.+.|++|+|.+...++.++.|+++++++.+
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l  110 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVL  110 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHH
Confidence            499999999999887766655433  345667888899999999999999999999999999999999999999999999


Q ss_pred             HhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCC---cchhhhHHHHHHHHHHHHHHHHHHHhhccC--ChhhHHHH
Q 020761          130 FLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGS---RPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCM  204 (321)
Q Consensus       130 ~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~---~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~--~~~~~~~~  204 (321)
                      ++|+|++.++++++++..+|+++....|...+...+.   ....|+++.+.+.++.|+..+.+||..+++  ++.+.+++
T Consensus       111 ~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy  190 (303)
T PF08449_consen  111 ILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFY  190 (303)
T ss_pred             hcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence            9999999999999999999999999877532221111   223499999999999999999999998876  57889999


Q ss_pred             HHHHHHHHHHHHHHhh-cccccc-------ccc-chhhHH------------------HhHHHHHHHHHHHHHHHHHHHH
Q 020761          205 IGVYGLLVSVVQLSTL-ELKSLE-------SVK-WSTDIL------------------SGATMLILSVLTSDMWAVILRI  257 (321)
Q Consensus       205 ~~~~~~~~~~i~~~~~-~~~~~~-------~~~-~~~~~~------------------~~a~~~~~~~~~~pv~~~~~~~  257 (321)
                      ...++.++..+..... ..+..+       .+. +.....                  .++...++...++.++++++|.
T Consensus       191 ~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~  270 (303)
T PF08449_consen  191 TNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSV  270 (303)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHH
Confidence            9999998885444441 111111       001 111111                  7777777778889999999999


Q ss_pred             HHhcccchHHHHhHHHHHhhhhheeeccCCCC
Q 020761          258 FCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  289 (321)
Q Consensus       258 ~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  289 (321)
                      +++++++++.+|.|.++++.|..++++.++|+
T Consensus       271 ~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  271 IIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            99999999999999999999999999887765

; GO: 0055085 transmembrane transport

>TIGR00688 rarD rarD protein

Probab=99.85  E-value=4.2e-19  Score=155.71  Aligned_cols=219  Identities=15%  Similarity=0.032  Sum_probs=149.3

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhh-cc-c----c---c-chh-hHHHHHHHHH
Q 020761           24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY-RR-Q----R---L-QVS-WYWYLLLGFV   92 (321)
Q Consensus        24 ~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~-~----~---~-~~~-~~~~~~~g~~   92 (321)
                      |.+. .+++.+.|+++....|.. .+. +|.+++++|++++++++.++... ++ +    +   . +++ +......|.+
T Consensus         3 g~~~-~i~a~~~wg~~~~~~k~~-~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         3 GIIV-SLLASFLFGYMYYYSKLL-KPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             cHHH-HHHHHHHHHHHHHHHHHh-ccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4444 456666777777777764 456 99999999999998887765432 21 1    1   1 122 2234555666


Q ss_pred             HHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhh
Q 020761           93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGD  172 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~  172 (321)
                      ....+.++++|++++++++++++.+++|+++++++++++|||++++++++++++++|+.++..++.       +.    .
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-------~~----~  148 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-------SL----P  148 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------Cc----h
Confidence            555689999999999999999999999999999999999999999999999999999998865221       11    1


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhh-ccc---cccc-ccchhhHH------------
Q 020761          173 ILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTL-ELK---SLES-VKWSTDIL------------  235 (321)
Q Consensus       173 ~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~---~~~~-~~~~~~~~------------  235 (321)
                      +++++++++||.|.+..||..++ +....... .+....+. .+.... +..   ..+. ..|.....            
T Consensus       149 ~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~i~~~l~  225 (256)
T TIGR00688       149 WEALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVA-IYYLLQTDFATVQQTNPFPIWLLLVLAGLITGTPLLAF  225 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHH-HHHHHHhccCcccccCchhHHHHHHHHHHHHHHHHHHH
Confidence            46789999999999999997543 33322221 11222222 111111 111   1111 13433222            


Q ss_pred             ------HhHHHHHHHHHHHHHHHHHHHHHH
Q 020761          236 ------SGATMLILSVLTSDMWAVILRIFC  259 (321)
Q Consensus       236 ------~~a~~~~~~~~~~pv~~~~~~~~~  259 (321)
                            .++...+...+++|+++++++.++
T Consensus       226 ~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       226 VIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence                  777788888889999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.81  E-value=2.4e-18  Score=150.62  Aligned_cols=274  Identities=20%  Similarity=0.255  Sum_probs=199.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHHh-------h--hc--c--------
Q 020761           17 MALRTLYLLLLGQLVSFSLALSSFTTAVITDL-GVDAPITQSVLCYLSLALAYGGIL-------L--YR--R--------   76 (321)
Q Consensus        17 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~~-~~~~p~~~~~~r~~~~~l~l~~~~-------~--~~--~--------   76 (321)
                      +.+++..|+.+..++..+|.+++.....+..+ .+..|+..++..-..-.+.+.++.       .  .|  +        
T Consensus         8 ~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e   87 (416)
T KOG2765|consen    8 KRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEE   87 (416)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhh
Confidence            44556788888888888999999888877654 455799988766433333333211       0  11  0        


Q ss_pred             ----------------------------------c-------------------ccc------------hhhHHHHHHHH
Q 020761           77 ----------------------------------Q-------------------RLQ------------VSWYWYLLLGF   91 (321)
Q Consensus        77 ----------------------------------~-------------------~~~------------~~~~~~~~~g~   91 (321)
                                                        .                   +.|            +--+.-+....
T Consensus        88 ~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~  167 (416)
T KOG2765|consen   88 ADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCP  167 (416)
T ss_pred             hhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHH
Confidence                                              0                   001            01123355666


Q ss_pred             HHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccc-cCCCCCcchh
Q 020761           92 VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEM-AGGGGSRPLL  170 (321)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~-~~~~~~~~~~  170 (321)
                      +...+++.++.|+.|++++..+++.++.-+||.+++.++.+||+++.+.+++.+++.|+++++-+|... +....+....
T Consensus       168 lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~ll  247 (416)
T KOG2765|consen  168 LWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLL  247 (416)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhH
Confidence            788889999999999999999999999999999999999999999999999999999999999887542 2234456689


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhccC-Chhh---HHHHHHHHHHHHHHHHHH-----hhccccccccc------------
Q 020761          171 GDILVIAGAIFFAMSYVGEEFLVKKI-DRVE---VVCMIGVYGLLVSVVQLS-----TLELKSLESVK------------  229 (321)
Q Consensus       171 G~~l~l~aa~~~a~~~v~~k~~~~~~-~~~~---~~~~~~~~~~~~~~i~~~-----~~~~~~~~~~~------------  229 (321)
                      |+++++++|+.||+|.++.||-.++. +...   +.++..++..+++..+..     ..|..+.|...            
T Consensus       248 G~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~lig  327 (416)
T KOG2765|consen  248 GNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIG  327 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHH
Confidence            99999999999999999999987776 3433   344444444444421221     22333333211            


Q ss_pred             -------chhhHH-HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCC
Q 020761          230 -------WSTDIL-SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL  290 (321)
Q Consensus       230 -------~~~~~~-~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  290 (321)
                             |.+..+ .++....+.+.++.+++++.+..+-+..+++.+++|...|++|.+..++..+...
T Consensus       328 tvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~  396 (416)
T KOG2765|consen  328 TVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSK  396 (416)
T ss_pred             HHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccccc
Confidence                   221111 7777777777788999999999999999999999999999999999998765433

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.80  E-value=9.6e-17  Score=133.58  Aligned_cols=240  Identities=15%  Similarity=0.059  Sum_probs=181.8

Q ss_pred             hHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHh
Q 020761           37 LSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR-RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLL  115 (321)
Q Consensus        37 ~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i  115 (321)
                      ..+-+++.+. ..+ .|...+.+|..++++++.+++..+ +|..+++|+..+..|......|.+||.+++.+|.+.+..+
T Consensus        26 ~Gas~Ak~LF-P~v-G~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAi  103 (292)
T COG5006          26 SGASFAKSLF-PLV-GAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAI  103 (292)
T ss_pred             hhHHHHHHHc-ccc-ChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhh
Confidence            3333444443 345 788999999999999998877643 4556778888999999988889999999999999999999


Q ss_pred             hcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhcc
Q 020761          116 DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKK  195 (321)
Q Consensus       116 ~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~  195 (321)
                      -++-|+.+..++    .+|..  ..+-+.+++.|+.++.-.+.    +..+.+..|..+++.++.||+.|.+..||..+.
T Consensus       104 EF~GPL~vA~~~----sRr~~--d~vwvaLAvlGi~lL~p~~~----~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~  173 (292)
T COG5006         104 EFTGPLAVALLS----SRRLR--DFVWVALAVLGIWLLLPLGQ----SVWSLDPVGVALALGAGACWALYIVLGQRAGRA  173 (292)
T ss_pred             hhccHHHHHHHh----ccchh--hHHHHHHHHHHHHhheeccC----CcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc
Confidence            999999888766    44444  34445667888888765332    234566789999999999999999999999876


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHhhccc-ccccccchhhH-----H---------------HhHHHHHHHHHHHHHHHHH
Q 020761          196 IDRVEVVCMIGVYGLLVSVVQLSTLELK-SLESVKWSTDI-----L---------------SGATMLILSVLTSDMWAVI  254 (321)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~-----~---------------~~a~~~~~~~~~~pv~~~~  254 (321)
                      .|..+.+..-+.+++++. +|+...+.. .+....-....     +               .+....++.+.++|.++.+
T Consensus       174 ~~g~~g~a~gm~vAaviv-~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl  252 (292)
T COG5006         174 EHGTAGVAVGMLVAALIV-LPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAAL  252 (292)
T ss_pred             CCCchHHHHHHHHHHHHH-hhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHH
Confidence            677788888888888888 776543321 11110000000     0               5566666777789999999


Q ss_pred             HHHHHhcccchHHHHhHHHHHhhhhheeeccCCCC
Q 020761          255 LRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  289 (321)
Q Consensus       255 ~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  289 (321)
                      .+++++||.+|+.||+|+..|+.++.-.+...+|+
T Consensus       253 ~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~  287 (292)
T COG5006         253 SGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP  287 (292)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence            99999999999999999999999887666555544

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.79  E-value=2.7e-17  Score=146.47  Aligned_cols=248  Identities=13%  Similarity=0.041  Sum_probs=170.3

Q ss_pred             HHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccc---cchhhHHHHHHHHHHHHHHHHHHHhhh
Q 020761           29 QLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR---LQVSWYWYLLLGFVDVQGNFLFNKAFQ  105 (321)
Q Consensus        29 ~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~al~  105 (321)
                      .+++.+.||+.....|... ++ ++....  |..++.+++..+....+++   .++-+..-++.|.....++.+++.+.+
T Consensus         6 ~lia~~~wGs~g~~~k~~~-g~-~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~   81 (290)
T TIGR00776         6 ALIPALFWGSFVLINVKIG-GG-PYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQFKSMR   81 (290)
T ss_pred             HHHHHHHHhhhHHHHhccC-CC-HHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence            4566677777555555443 66 554443  6767766665543322221   122333344455556666999999999


Q ss_pred             cchhhHHHHhhc-CchHHHHHHHHHHhhcchhHHH----HHHHHHHHHhhhhhccccccccCCCC--CcchhhhHHHHHH
Q 020761          106 FTSISSVTLLDC-CAIPCAIVFTWVFLGTRYSVWQ----LFGASLCVLGLGLMLLSDAEMAGGGG--SRPLLGDILVIAG  178 (321)
Q Consensus       106 ~~~~~~~~~i~~-~~pi~~~ils~l~l~er~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~~~~--~~~~~G~~l~l~a  178 (321)
                      +++++.+.++.+ +.++++.+++.+++|||.++++    ++|++++++|+.++...+.. +.+++  .+...|+.+++++
T Consensus        82 ~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~-~~~~~~~~~~~~Gi~~~l~s  160 (290)
T TIGR00776        82 YMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDK-SAGIKSEFNFKKGILLLLMS  160 (290)
T ss_pred             HHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccc-ccccccccchhhHHHHHHHH
Confidence            999999999988 8899999999999999999999    99999999999998775431 11111  2336899999999


Q ss_pred             HHHHHHHHHHHHHhhccCChhhHHHHHHH---HHHHHHHHHHHhhcccccccccchhhHH------------------Hh
Q 020761          179 AIFFAMSYVGEEFLVKKIDRVEVVCMIGV---YGLLVSVVQLSTLELKSLESVKWSTDIL------------------SG  237 (321)
Q Consensus       179 a~~~a~~~v~~k~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~------------------~~  237 (321)
                      +++|+.|.+..|+.  ++||...++.+..   .+..+...+.. ...+..+...|.....                  .+
T Consensus       161 g~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~  237 (290)
T TIGR00776       161 TIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKPLKKYAILLNILPGLMWGIGNFFYLFSAQPKVG  237 (290)
T ss_pred             HHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHh-cccchHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence            99999999999986  4788877544443   33333323331 0111111111111000                  44


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHH----hHHHHHhhhhheeec
Q 020761          238 ATMLILSVLTSDMWAVILRIFCYHQQVNWTYY----LAFAAVLIGLIIYST  284 (321)
Q Consensus       238 a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~  284 (321)
                      +...+.....+|+.+.+++++++||+.+..++    +|+++++.|+.+...
T Consensus       238 ~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       238 VATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            55566667789999999999999999999999    999999999887643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.73  E-value=4e-18  Score=150.43  Aligned_cols=236  Identities=17%  Similarity=0.271  Sum_probs=189.7

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHhhhcc---cc--cchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHH
Q 020761           49 GVDAPITQSVLCYLSLALAYGGILLYRR---QR--LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCA  123 (321)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~--~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~  123 (321)
                      ++..|..++..+...+.+.+......+-   ++  .+..++..+.+|+....+..+-+.++.|.|++.++++..++|+++
T Consensus        44 ~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~t  123 (316)
T KOG1441|consen   44 GFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFT  123 (316)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhH
Confidence            7878999999977777776665544331   12  345788888999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhcc----CChh
Q 020761          124 IVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKK----IDRV  199 (321)
Q Consensus       124 ~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~----~~~~  199 (321)
                      .++++++.+|+++...+.+++....|+.+.++.|.       +.++.|.+.++.+.+..++.+++.|+..++    .|+.
T Consensus       124 vl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~  196 (316)
T KOG1441|consen  124 VLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSM  196 (316)
T ss_pred             HHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCch
Confidence            99999999999999999999999999999988443       467799999999999999999999999842    4889


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhccc-cc---ccccchhhHH----------------------HhHHHHHHHHHHHHHHHH
Q 020761          200 EVVCMIGVYGLLVSVVQLSTLELK-SL---ESVKWSTDIL----------------------SGATMLILSVLTSDMWAV  253 (321)
Q Consensus       200 ~~~~~~~~~~~~~~~i~~~~~~~~-~~---~~~~~~~~~~----------------------~~a~~~~~~~~~~pv~~~  253 (321)
                      +...++..++++++++|+...+.. ..   ....|.....                      +++...++...+.-++.+
T Consensus       197 ~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi  276 (316)
T KOG1441|consen  197 NLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVI  276 (316)
T ss_pred             HHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEE
Confidence            999999999999995487654332 22   1112322211                      445555554555566678


Q ss_pred             HHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCCC
Q 020761          254 ILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLP  291 (321)
Q Consensus       254 ~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  291 (321)
                      +.|+.+|+++.++.+..|.++.+.|+++|++.+.++++
T Consensus       277 ~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  277 VVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             EeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            88999999999999999999999999999988776543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.71  E-value=3.4e-15  Score=127.60  Aligned_cols=249  Identities=16%  Similarity=0.113  Sum_probs=175.7

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhh--hcccc----cchh-hHHHHHHHHHHH
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILL--YRRQR----LQVS-WYWYLLLGFVDV   94 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~--~~~~~----~~~~-~~~~~~~g~~~~   94 (321)
                      .+|++++ +.+-+.||....-.|+.. .. ++.++...|.+-+...++.+..  ++++.    .+++ ......++....
T Consensus         6 ~~Gil~~-l~Ay~lwG~lp~y~kll~-~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           6 RKGILLA-LLAYLLWGLLPLYFKLLE-PL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             cchhHHH-HHHHHHHHHHHHHHHHHc-cC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            4666776 566677777665556553 55 8899999998887777665543  22221    1112 122333344444


Q ss_pred             HH-HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhH
Q 020761           95 QG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDI  173 (321)
Q Consensus        95 ~~-~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~  173 (321)
                      .. ...|.+|.....+-++++-++..|++.++++.+++|||+++.|+++++++.+||...+....       +.+    +
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g-------~lp----w  151 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG-------SLP----W  151 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-------CCc----H
Confidence            55 55677899999999999999999999999999999999999999999999999999888322       233    3


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccc--c---ccccchhhHH-------------
Q 020761          174 LVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKS--L---ESVKWSTDIL-------------  235 (321)
Q Consensus       174 l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~---~~~~~~~~~~-------------  235 (321)
                      .++.=++.|+.|..+-|+.  +.|+.+........-.+...+.....+.+.  .   +...|...+.             
T Consensus       152 val~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~  229 (293)
T COG2962         152 VALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFA  229 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHH
Confidence            4466678899999887765  357777777777666666634333333322  1   1112222221             


Q ss_pred             -----HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccC
Q 020761          236 -----SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  286 (321)
Q Consensus       236 -----~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  286 (321)
                           ..-....+..+.+|..-.+++++++||+++..+....++|..|+.++....
T Consensus       230 ~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         230 AAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence                 333444566678999999999999999999999999999999999988654

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.68  E-value=2.8e-13  Score=119.12  Aligned_cols=207  Identities=14%  Similarity=0.133  Sum_probs=156.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccccccc-
Q 020761           83 WYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMA-  161 (321)
Q Consensus        83 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~-  161 (321)
                      ..+..+.+++...-|.++|.++.+.++++.++..++..+.|+++++++++||++++||.++++.++|+.++-.+...+. 
T Consensus        92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~  171 (345)
T KOG2234|consen   92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG  171 (345)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            3456666777766677999999999999999999999999999999999999999999999999999999984333211 


Q ss_pred             ---CCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhccCC--hhhHHHHHHHHHHHHHHHHHHhhcccccc------ccc-
Q 020761          162 ---GGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID--RVEVVCMIGVYGLLVSVVQLSTLELKSLE------SVK-  229 (321)
Q Consensus       162 ---~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~-  229 (321)
                         .....+.+.|....+.+++..++..++.+|..|+.+  ....+....++|.++.++.....+.+...      ..+ 
T Consensus       172 a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~  251 (345)
T KOG2234|consen  172 AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSS  251 (345)
T ss_pred             ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccH
Confidence               123456789999999999999999999999998753  44455666677777774444433332221      111 


Q ss_pred             chhhHH----------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCC
Q 020761          230 WSTDIL----------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  289 (321)
Q Consensus       230 ~~~~~~----------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  289 (321)
                      +.|.+.                .+-..-........+++.+.++.+++-+||....+|..+++.++.+|...+.++
T Consensus       252 ~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  252 IVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            111111                333333344446788999999999999999999999999999999999555543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.65  E-value=3e-14  Score=120.35  Aligned_cols=248  Identities=23%  Similarity=0.287  Sum_probs=184.0

Q ss_pred             hHHHHHHHHHhc-------CCChhHHHHHHHHHHHHHHHHHHhhhcccc---------------c--chhhHHHHHHHHH
Q 020761           37 LSSFTTAVITDL-------GVDAPITQSVLCYLSLALAYGGILLYRRQR---------------L--QVSWYWYLLLGFV   92 (321)
Q Consensus        37 ~~~~~~~~l~~~-------~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---------------~--~~~~~~~~~~g~~   92 (321)
                      ..|+...|.++.       ++..|+.++...++.-.++++.+...|.+.               .  +.+...++..+++
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~   95 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALC   95 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHH
Confidence            337777887643       477899999999998888887766543211               1  1123445667889


Q ss_pred             HHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCC---CCCcch
Q 020761           93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGG---GGSRPL  169 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~---~~~~~~  169 (321)
                      +..+..++|.++.+++++..+++.....+|+.+++..+++++++.+||+|+.....|++++...|.+.+..   +.++..
T Consensus        96 Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~ii  175 (372)
T KOG3912|consen   96 DIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSII  175 (372)
T ss_pred             HHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999887653322   235567


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhccC--ChhhHHHHHHHHHHHHHHH---HHHhhccc-cccc------ccchhhHH--
Q 020761          170 LGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMIGVYGLLVSVV---QLSTLELK-SLES------VKWSTDIL--  235 (321)
Q Consensus       170 ~G~~l~l~aa~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~i---~~~~~~~~-~~~~------~~~~~~~~--  235 (321)
                      .|+++.+.+-+.-|+..+.-+|..+++  +|.+.++|..++|..+..+   |....... .+..      .+|.....  
T Consensus       176 tGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~  255 (372)
T KOG3912|consen  176 TGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAAL  255 (372)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHh
Confidence            999999999999999999999998876  6999999999999655422   22221111 1110      01111000  


Q ss_pred             ------------------------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeec
Q 020761          236 ------------------------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  284 (321)
Q Consensus       236 ------------------------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  284 (321)
                                                    .++..-.+.=.....+-=+++.....|.++..|+.|.++.+.|+++|+-
T Consensus       256 ~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  256 QESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             cCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                          2222222222244555566777888999999999999999999999874

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.64  E-value=3.2e-14  Score=122.98  Aligned_cols=197  Identities=19%  Similarity=0.207  Sum_probs=151.8

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccc
Q 020761           79 LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (321)
Q Consensus        79 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~  158 (321)
                      .+++..++.+.+++....|.+.+.++++.+++..+++.++..++|++++++++|+|++.+||.++.+.+.|+.++-..+.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34456678899999999999999999999999999999999999999999999999999999999999999999877654


Q ss_pred             ccc---CCC-------CCcchhhhHHHHHHHHHHHHHHHHHHHhhccC--ChhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 020761          159 EMA---GGG-------GSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMIGVYGLLVSVVQLSTLELKSLE  226 (321)
Q Consensus       159 ~~~---~~~-------~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  226 (321)
                      ...   .+.       ..+...|.+..++++++.|+..++.||..|+.  +......+..++|.++..+.....+.....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~  172 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAIS  172 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            321   111       22456999999999999999999999999987  445566777777877774443333222211


Q ss_pred             ------ccc-chhhHH----------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHH
Q 020761          227 ------SVK-WSTDIL----------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAV  275 (321)
Q Consensus       227 ------~~~-~~~~~~----------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li  275 (321)
                            ..+ |.+..+                .+...-+.....+.+++.+.++.+|+.+++....+|..++
T Consensus       173 ~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  173 ESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence                  111 122111                4444444555578999999999999999999999997653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.63  E-value=6.9e-14  Score=119.70  Aligned_cols=231  Identities=15%  Similarity=0.211  Sum_probs=170.7

Q ss_pred             cCCChhHHHHHHHHHHHHHHHHHHhh-hc-cc---ccchhhHHHH----HHHHHHHHHHHHHHHhhhcchhhHHHHhhcC
Q 020761           48 LGVDAPITQSVLCYLSLALAYGGILL-YR-RQ---RLQVSWYWYL----LLGFVDVQGNFLFNKAFQFTSISSVTLLDCC  118 (321)
Q Consensus        48 ~~~~~p~~~~~~r~~~~~l~l~~~~~-~~-~~---~~~~~~~~~~----~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~  118 (321)
                      +++.-|+.++.+++++-.+.-..... ++ +.   +.+.+|..++    ..|++....-.+-+++++|++.+.+++..++
T Consensus        40 ~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSS  119 (349)
T KOG1443|consen   40 KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSS  119 (349)
T ss_pred             cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeecccc
Confidence            45767999999988776555443322 22 11   2233555444    4444444446788999999999999999999


Q ss_pred             chHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhccC--
Q 020761          119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--  196 (321)
Q Consensus       119 ~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~--  196 (321)
                      .++|+.+++.+|-=||+++.-...+.+..+|+.+.++.+.       +.+..|..+..++.++.|+...+.++..++.  
T Consensus       120 si~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~  192 (349)
T KOG1443|consen  120 SILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPS  192 (349)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCcc
Confidence            9999999999988899999999999999999999998443       3567899999999999999998888887776  


Q ss_pred             ---ChhhHHHHHHHHHHHHHHHHHHhhccccccc---------c--c-chhhHH--------------------HhHHHH
Q 020761          197 ---DRVEVVCMIGVYGLLVSVVQLSTLELKSLES---------V--K-WSTDIL--------------------SGATML  241 (321)
Q Consensus       197 ---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------~--~-~~~~~~--------------------~~a~~~  241 (321)
                         +|............+.++...+.+|+.....         .  . +....+                    ++....
T Consensus       193 ~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltl  272 (349)
T KOG1443|consen  193 AKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTL  272 (349)
T ss_pred             ccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceee
Confidence               4677777766666666634455566532210         0  0 110000                    555555


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeecc
Q 020761          242 ILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  285 (321)
Q Consensus       242 ~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  285 (321)
                      ++.+...-+-+.+++..+.+|.++...|+|..+...|+.++...
T Consensus       273 SIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~  316 (349)
T KOG1443|consen  273 SIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNE  316 (349)
T ss_pred             eHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccC
Confidence            56666677888999999999999999999999999999999443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.60  E-value=4.5e-13  Score=114.82  Aligned_cols=240  Identities=16%  Similarity=0.235  Sum_probs=193.5

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHhhhc--ccccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHH
Q 020761           49 GVDAPITQSVLCYLSLALAYGGILLYR--RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVF  126 (321)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~il  126 (321)
                      .+.+|..+.+.+.+.+.+.-..++-.+  +...+.+|+.+...++.+.....|.+.|++|++-.+..+-.+...+-+++.
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlm  126 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLM  126 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHH
Confidence            367888889888888777654433322  233466889999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcchhHHHHHHHHHHHHhhhhhccccccccC--CCCCcchhhhHHHHHHHHHHHHHHHHHHHhhccC--ChhhHH
Q 020761          127 TWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAG--GGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVV  202 (321)
Q Consensus       127 s~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~--~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~--~~~~~~  202 (321)
                      ..++.|+|++.++.+...+...|+.+....+..++.  +...+...|..+....-++-+..+..+.++.++.  ++..++
T Consensus       127 g~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM  206 (327)
T KOG1581|consen  127 GTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMM  206 (327)
T ss_pred             HHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHH
Confidence            999999999999999999999999999887543211  2334677999999999999999999999998876  688999


Q ss_pred             HHHHHHHHHHHHHHHHhhccccccc---------ccchhhHH-----------------HhHHHHHHHHHHHHHHHHHHH
Q 020761          203 CMIGVYGLLVSVVQLSTLELKSLES---------VKWSTDIL-----------------SGATMLILSVLTSDMWAVILR  256 (321)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~~~~~~~---------~~~~~~~~-----------------~~a~~~~~~~~~~pv~~~~~~  256 (321)
                      ++.++++++..... .+.+....+.         ..|.....                 .|+.....+..++-++++.++
T Consensus       207 ~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS  285 (327)
T KOG1581|consen  207 FGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLS  285 (327)
T ss_pred             HHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHH
Confidence            99999999988443 3333322221         11111111                 778888888889999999999


Q ss_pred             HHHhcccchHHHHhHHHHHhhhhheeeccCCCC
Q 020761          257 IFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  289 (321)
Q Consensus       257 ~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  289 (321)
                      .+.+|.++++.||.|..+++.|+.+-.+.++++
T Consensus       286 ~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  286 CIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             HHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            999999999999999999999998877766653

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.57  E-value=4e-14  Score=116.71  Aligned_cols=235  Identities=11%  Similarity=0.152  Sum_probs=173.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHhh-hc-ccccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHH
Q 020761           53 PITQSVLCYLSLALAYGGILL-YR-RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVF  130 (321)
Q Consensus        53 p~~~~~~r~~~~~l~l~~~~~-~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~  130 (321)
                      ...+++++...-.+.-=.++. ++ .+.++.+-+.|...++....++...+.|+||+|-.+..+-.+..|+-++++++++
T Consensus        53 alaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~  132 (337)
T KOG1580|consen   53 ALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF  132 (337)
T ss_pred             HHHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh
Confidence            344555554444333222222 22 3445556667888888888889999999999999999999999999999999999


Q ss_pred             hhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhccC--ChhhHHHHHHHH
Q 020761          131 LGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMIGVY  208 (321)
Q Consensus       131 l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~  208 (321)
                      .+++.+|++..+++++++|+++..+.+....+.++.....|.++.+++-.+-++....+.|+.+.+  +...++.+.+++
T Consensus       133 ~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~Nlw  212 (337)
T KOG1580|consen  133 AHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLW  212 (337)
T ss_pred             hcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHH
Confidence            999999999999999999999999976433344555667999999999999999999999987766  456788899999


Q ss_pred             HHHHHHHHHHhhccccc---------ccccchhhHH-----------------HhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 020761          209 GLLVSVVQLSTLELKSL---------ESVKWSTDIL-----------------SGATMLILSVLTSDMWAVILRIFCYHQ  262 (321)
Q Consensus       209 ~~~~~~i~~~~~~~~~~---------~~~~~~~~~~-----------------~~a~~~~~~~~~~pv~~~~~~~~~~~e  262 (321)
                      +.+.+.....+ .++.+         |..-|....+                 .++..-++...+.-.++++.|+++++.
T Consensus       213 StL~Lg~g~lf-TGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~n  291 (337)
T KOG1580|consen  213 STLYLGAGLLF-TGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNN  291 (337)
T ss_pred             HHHHhhhhhee-hhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcC
Confidence            98888544332 22111         1111221111                 333333333447789999999999999


Q ss_pred             cchHHHHhHHHHHhhhhheeeccCCC
Q 020761          263 QVNWTYYLAFAAVLIGLIIYSTTAKD  288 (321)
Q Consensus       263 ~~~~~~~~G~~li~~g~~l~~~~~~~  288 (321)
                      +++..||+|..+++.+...-....++
T Consensus       292 pls~rQwlgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  292 PLSGRQWLGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             cCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence            99999999999999998776654443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.51  E-value=2.1e-13  Score=102.00  Aligned_cols=127  Identities=25%  Similarity=0.256  Sum_probs=106.8

Q ss_pred             HHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhccc------ccchhhHHHHHHHHHHHHHHHHHH
Q 020761           28 GQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ------RLQVSWYWYLLLGFVDVQGNFLFN  101 (321)
Q Consensus        28 ~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~  101 (321)
                      ..+++..+++...+..|+..++. +|...+..|-....+.++.+.....+      ..++.|....+.|..+..+.++||
T Consensus         7 ~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf   85 (140)
T COG2510           7 YALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYF   85 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHH
Confidence            34566677788788888988888 99999999998888777776654321      245667666666766667799999


Q ss_pred             HhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761          102 KAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus       102 ~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      .|++...++.+.++..++|+++++++++++|||++.++|+|+++..+|++++..
T Consensus        86 ~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          86 RALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            999999999999999999999999999999999999999999999999988754

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.50  E-value=6.6e-13  Score=111.81  Aligned_cols=267  Identities=16%  Similarity=0.165  Sum_probs=195.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHH--HhcCCC-hhHHHHHHHHHHHHHHHHHHhh-hcccccchhhHHHHHHHHH
Q 020761           17 MALRTLYLLLLGQLVSFSLALSSFTTAVI--TDLGVD-APITQSVLCYLSLALAYGGILL-YRRQRLQVSWYWYLLLGFV   92 (321)
Q Consensus        17 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~l--~~~~~~-~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~   92 (321)
                      .++++|.-.+++....+......-....+  ..+++. ..+.+++.+++....+-+.... .+.++...+|+.|..++++
T Consensus        36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~  115 (367)
T KOG1582|consen   36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFL  115 (367)
T ss_pred             ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhh
Confidence            34455555444433333333332222211  234662 2456777777776544333222 3344556689999999999


Q ss_pred             HHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhh
Q 020761           93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGD  172 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~  172 (321)
                      ..+.+.+.+.++.|.+-....+..++.-+-+++.+.++-+.|..+....+..+..+|.++.+..|.+   ...+.+..|.
T Consensus       116 t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~---~sPNF~~~Gv  192 (367)
T KOG1582|consen  116 TVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQ---TSPNFNLIGV  192 (367)
T ss_pred             hhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccc---cCCCcceeeH
Confidence            8888999999999999999999999999999999999999999999999999999999999998862   2345667899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccC--ChhhHHHHHHHHHHHHHHHHHHhhcccccc------cccc-hhhH--H------
Q 020761          173 ILVIAGAIFFAMSYVGEEFLVKKI--DRVEVVCMIGVYGLLVSVVQLSTLELKSLE------SVKW-STDI--L------  235 (321)
Q Consensus       173 ~l~l~aa~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~-~~~~--~------  235 (321)
                      .+.-.+-++-|.--.++++.++..  +..+++++...+|.+....|....+ +-++      ..+| ....  +      
T Consensus       193 ~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTg-e~f~a~~fcaehp~~tyGy~~~~s~~gy  271 (367)
T KOG1582|consen  193 MMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTG-ELFSAWTFCAEHPVRTYGYAFLFSLAGY  271 (367)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcc-cchhhhHHHHhCcHhHHHHHHHHHHHhH
Confidence            999999999999888999998876  4578899999999988866654332 2111      1122 1111  1      


Q ss_pred             ------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          236 ------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       236 ------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                                  .|+..+.......-.+++++|+++|..|+|.+..-|..+|+.|+++-.+++.
T Consensus       272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence                        5566666666668889999999999999999999999999999999888773

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.35  E-value=4.9e-12  Score=98.03  Aligned_cols=118  Identities=24%  Similarity=0.388  Sum_probs=94.6

Q ss_pred             HHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhh--cc---cccchhhHHHHHHHHHH-HHHHHHHHHhhhcch
Q 020761           35 LALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY--RR---QRLQVSWYWYLLLGFVD-VQGNFLFNKAFQFTS  108 (321)
Q Consensus        35 ~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~---~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~  108 (321)
                      .|+......|...++. +|....++|+..+.+ +.++...  ++   +..++++......+.+. ...+.++++++++.+
T Consensus         2 ~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             eeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            4566555666655566 999999999999986 4443332  22   22344566677777774 555999999999999


Q ss_pred             hhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhc
Q 020761          109 ISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (321)
Q Consensus       109 ~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~  154 (321)
                      ++.++++.++.|+++.+++++++|||+++++++|++++++|+.++.
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.35  E-value=2e-10  Score=99.93  Aligned_cols=245  Identities=14%  Similarity=0.060  Sum_probs=174.0

Q ss_pred             HHHHHHHhc--CCChhHHHHHHHHHHHHHHHHHHhhhc----ccccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHH
Q 020761           40 FTTAVITDL--GVDAPITQSVLCYLSLALAYGGILLYR----RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVT  113 (321)
Q Consensus        40 ~~~~~l~~~--~~~~p~~~~~~r~~~~~l~l~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~  113 (321)
                      .+.-|....  ++...+.....+.+.+.+.+...-..+    ++-.++..++.+...++..+..+.-..+++|.++...+
T Consensus        28 ~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~t  107 (314)
T KOG1444|consen   28 TVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFT  107 (314)
T ss_pred             HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHHH
Confidence            334454443  443334444478777776665443322    22223444556666666666666667899999999999


Q ss_pred             HhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhh
Q 020761          114 LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLV  193 (321)
Q Consensus       114 ~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~  193 (321)
                      ++....|+++++....++|.|++..-|.++....+|.......|.       +.+..|..+++...++.+.+.+..|+..
T Consensus       108 v~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~-------sf~~~gY~w~~~n~~~~a~~~v~~kk~v  180 (314)
T KOG1444|consen  108 VFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL-------SFNLRGYSWALANCLTTAAFVVYVKKSV  180 (314)
T ss_pred             HHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc-------eecchhHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999988877665       3344599999999999999999999987


Q ss_pred             ccC--ChhhHHHHHHHHHHHHHHHHHHhhcccc---cccccch------hhHH------------------HhHHHHHHH
Q 020761          194 KKI--DRVEVVCMIGVYGLLVSVVQLSTLELKS---LESVKWS------TDIL------------------SGATMLILS  244 (321)
Q Consensus       194 ~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~------~~~~------------------~~a~~~~~~  244 (321)
                      +..  +.+..++|..+.+.....+....++..+   .....|.      ...+                  .++....+.
T Consensus       181 d~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tiv  260 (314)
T KOG1444|consen  181 DSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIV  260 (314)
T ss_pred             ccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeeh
Confidence            665  4677889999998888855444443211   1111121      1111                  333333344


Q ss_pred             HHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCCC
Q 020761          245 VLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLP  291 (321)
Q Consensus       245 ~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  291 (321)
                      +..+...+.+-...++|++.++...+|..+-+.|-++|++.+.++++
T Consensus       261 G~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~  307 (314)
T KOG1444|consen  261 GAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK  307 (314)
T ss_pred             hhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence            44456667777788889999999999999999999999988765543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.30  E-value=3.8e-11  Score=96.78  Aligned_cols=195  Identities=14%  Similarity=0.228  Sum_probs=138.6

Q ss_pred             HHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcch
Q 020761           90 GFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPL  169 (321)
Q Consensus        90 g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~  169 (321)
                      .....+.++.|..|++..++++++.+....-.|+.+++++.+|+|+...++++.++++.|++++.+.|.     +..+++
T Consensus        60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-----~~a~e~  134 (290)
T KOG4314|consen   60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-----EHADEI  134 (290)
T ss_pred             EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-----hhhhhh
Confidence            344566799999999999999999999999999999999999999999999999999999999999764     456788


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHH---HHHHHHHHh-----hcc-cccccccchhhHH-----
Q 020761          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGL---LVSVVQLST-----LEL-KSLESVKWSTDIL-----  235 (321)
Q Consensus       170 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~-----~~~-~~~~~~~~~~~~~-----  235 (321)
                      .|+..+..++.+.|+|-|+.|+..++.+--+...+....|.   ++...|...     .|. +.+...+|.....     
T Consensus       135 iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG~l~G~A~L~  214 (290)
T KOG4314|consen  135 IGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWGCLCGAAGLS  214 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCchhhhhHHHHH
Confidence            99999999999999999999999887654333333332332   222222221     121 1233345543221     


Q ss_pred             -------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCC
Q 020761          236 -------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  289 (321)
Q Consensus       236 -------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  289 (321)
                                   ..+...++.+....+.....+.++-+-..+.....|..+|..|.++...++.+.
T Consensus       215 lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~~  281 (290)
T KOG4314|consen  215 LAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDKD  281 (290)
T ss_pred             HHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccchh
Confidence                         222222222222333345556555455567788999999999999988766543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.30  E-value=2.7e-11  Score=92.53  Aligned_cols=100  Identities=24%  Similarity=0.410  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHhhhccc------c-cchhhHHHHHHHHHHH-HHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHH
Q 020761           58 VLCYLSLALAYGGILLYRRQ------R-LQVSWYWYLLLGFVDV-QGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV  129 (321)
Q Consensus        58 ~~r~~~~~l~l~~~~~~~~~------~-~~~~~~~~~~~g~~~~-~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l  129 (321)
                      .+|+..+.+.+..+...+++      . .++++.+....|.++. ..+.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            46888888877776654321      1 2334555666688776 55889999999999 58889999999999999999


Q ss_pred             HhhcchhHHHHHHHHHHHHhhhhhccccc
Q 020761          130 FLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (321)
Q Consensus       130 ~l~er~~~~~~~~~~l~~~Gv~l~~~~~~  158 (321)
                      ++|||++++++.+++++++|++++.++|.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999765

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.20  E-value=1.6e-11  Score=103.89  Aligned_cols=256  Identities=13%  Similarity=0.146  Sum_probs=172.8

Q ss_pred             HHHHHHhHHHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHHhh-hcccccchhhHHHHHHHHHHHHHHHHHHHhhhc-c
Q 020761           31 VSFSLALSSFTTAVITDL-GVDAPITQSVLCYLSLALAYGGILL-YRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQF-T  107 (321)
Q Consensus        31 ~a~~~~~~~~~~~~l~~~-~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~  107 (321)
                      ..+.-++++...-..... +-.+--.+++.++++-+.-=++..- ....+.+.+.+.|...-......+.+-++++++ +
T Consensus        10 ~vf~GCcsnvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I   89 (330)
T KOG1583|consen   10 LVFGGCCSNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNI   89 (330)
T ss_pred             HHHHhhhchHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecc
Confidence            333334445444443322 2223456777777765543322221 112234455666666666656668899999987 5


Q ss_pred             hhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccccc---c------cCC---CCCcchhhhHHH
Q 020761          108 SISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE---M------AGG---GGSRPLLGDILV  175 (321)
Q Consensus       108 ~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~---~------~~~---~~~~~~~G~~l~  175 (321)
                      |...-.++.+-.++.+++++++++|+|.+.+|+.++.+..+|+++.+..+..   +      .++   .......|+.+.
T Consensus        90 ~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL  169 (330)
T KOG1583|consen   90 PMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALL  169 (330)
T ss_pred             cceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHH
Confidence            6667778889999999999999999999999999999999999998875432   1      010   111234888888


Q ss_pred             HHHHHHHHHHHHHHHHhhccC--ChhhHHHHHHHHHHHHHHHHH--------Hhhccc--ccc------cccchhhHH--
Q 020761          176 IAGAIFFAMSYVGEEFLVKKI--DRVEVVCMIGVYGLLVSVVQL--------STLELK--SLE------SVKWSTDIL--  235 (321)
Q Consensus       176 l~aa~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~i~~--------~~~~~~--~~~------~~~~~~~~~--  235 (321)
                      ..+-+..|...+.++...+++  |+.+.++|..+.+....++..        ..+..+  ..|      +..|.....  
T Consensus       170 ~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~  249 (330)
T KOG1583|consen  170 VFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNV  249 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHH
Confidence            899999999999999988887  789999999988877662221        011111  111      112332221  


Q ss_pred             ----------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccC
Q 020761          236 ----------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  286 (321)
Q Consensus       236 ----------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  286 (321)
                                      .++...++...++-.++.++|.+.|+.+++++.|+|..++..|.+++...-
T Consensus       250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~  316 (330)
T KOG1583|consen  250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW  316 (330)
T ss_pred             HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence                            333333344457899999999999999999999999999999999987543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.19  E-value=4.2e-12  Score=107.18  Aligned_cols=237  Identities=16%  Similarity=0.160  Sum_probs=175.7

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHhhhcc--------cccc---hhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcC
Q 020761           50 VDAPITQSVLCYLSLALAYGGILLYRR--------QRLQ---VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCC  118 (321)
Q Consensus        50 ~~~p~~~~~~r~~~~~l~l~~~~~~~~--------~~~~---~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~  118 (321)
                      .+.|...++++.+....++..+..-.+        .+.+   +..+..+-+.++...+-.+-++.++|++++...+-.++
T Consensus        58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccch
Confidence            568999999999988777766543211        1111   12234445555555555566789999999999999999


Q ss_pred             chHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhccCC-
Q 020761          119 AIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID-  197 (321)
Q Consensus       119 ~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~-  197 (321)
                      ..+|+++++++++|+|-+..-..+..+.+.|-.+=+..+    +..+...+.|.+++..+.++-|+..+..||.....+ 
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE----~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~  213 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQE----GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGD  213 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheeccccc----cccCccchhhhHHHHHHHHHHHHHHHhhheecccccC
Confidence            999999999999999999999999888888876644422    234556789999999999999999999998655542 


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHHhhccc-----ccccc--cchhhHH--------------------HhHHHHHHHHHHHH
Q 020761          198 -RVEVVCMIGVYGLLVSVVQLSTLELK-----SLESV--KWSTDIL--------------------SGATMLILSVLTSD  249 (321)
Q Consensus       198 -~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~--~~~~~~~--------------------~~a~~~~~~~~~~p  249 (321)
                       -...++|..+.+.++. +|.....++     .+|..  .|.|..+                    .++..-|++....-
T Consensus       214 ~iw~lt~ynnv~a~lLf-lpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka  292 (347)
T KOG1442|consen  214 CIWRLTAYNNVNALLLF-LPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKA  292 (347)
T ss_pred             eehhhHHHHHHHHHHHH-HHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHH
Confidence             4577888898888888 776654431     11221  1222222                    66666667666677


Q ss_pred             HHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCCC
Q 020761          250 MWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLLP  291 (321)
Q Consensus       250 v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  291 (321)
                      ..-.+++..+++|..+..-|.|-.+++.|...|++.++++.+
T Consensus       293 ~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~  334 (347)
T KOG1442|consen  293 AAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMR  334 (347)
T ss_pred             HHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHH
Confidence            777888899999999999999999999999999987765543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.16  E-value=5.7e-09  Score=90.25  Aligned_cols=198  Identities=15%  Similarity=0.171  Sum_probs=138.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhh-cCchHHHHHHHHHHhhcchhHHHHH----HHHHHHHhhhhhcc
Q 020761           81 VSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD-CCAIPCAIVFTWVFLGTRYSVWQLF----GASLCVLGLGLMLL  155 (321)
Q Consensus        81 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ils~l~l~er~~~~~~~----~~~l~~~Gv~l~~~  155 (321)
                      ..+..-++.|++...++..++.++++.+++.+.++. ...-+.+.+++.++++|.-+..+++    ++++.++|+.+.+.
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            566667788888899999999999999999999997 5556679999999999988766554    88888999999998


Q ss_pred             ccccccCC-CCCcchhhhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhccc-ccccccchhh
Q 020761          156 SDAEMAGG-GGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELK-SLESVKWSTD  233 (321)
Q Consensus       156 ~~~~~~~~-~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~  233 (321)
                      .|..++.. .+.+...|....+++.+.|..|.+..|..  +.|+.....=+. .|.++..+.+...... ..++..|...
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~lPqa-iGm~i~a~i~~~~~~~~~~~k~~~~ni  199 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAFLPQA-IGMLIGAFIFNLFSKKPFFEKKSWKNI  199 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhHHHHH-HHHHHHHHHHhhcccccccccchHHhh
Confidence            77532221 23455689999999999999999998763  457766555443 3333332333332221 1222222211


Q ss_pred             H---H--------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHH----HHhHHHHHhhhhhe
Q 020761          234 I---L--------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWT----YYLAFAAVLIGLII  281 (321)
Q Consensus       234 ~---~--------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~----~~~G~~li~~g~~l  281 (321)
                      .   +              .+.........+.++++.+.+.+++||.-+..    .++|.++++.|.++
T Consensus       200 l~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  200 LTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            1   1              33333334445789999999999999987754    56788888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.07  E-value=5e-09  Score=91.92  Aligned_cols=130  Identities=22%  Similarity=0.257  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccc---cchhhHHHHHHHHHHHH-HH
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR---LQVSWYWYLLLGFVDVQ-GN   97 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~~-~~   97 (321)
                      .+|....++.++.+...+...++...+.-.++.....+++.++.+++.+.....++.   .+++|...+..+.++.. ++
T Consensus       127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (260)
T TIGR00950       127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAY  206 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            467777766666666667766666542211344555577888888887776543222   23455556667777644 48


Q ss_pred             HHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhh
Q 020761           98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLG  151 (321)
Q Consensus        98 ~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~  151 (321)
                      .++++++++.+++.++.+.++.|++++++++++++||++..++.|..+.+.|+.
T Consensus       207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            899999999999999999999999999999999999999999999999999863

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.92  E-value=5.5e-08  Score=73.19  Aligned_cols=113  Identities=19%  Similarity=0.225  Sum_probs=85.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccc----cccccchhhHHHhHHHHH---H
Q 020761          171 GDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKS----LESVKWSTDILSGATMLI---L  243 (321)
Q Consensus       171 G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~a~~~~---~  243 (321)
                      ...+++++|+++++..++.|-..++.||...+..-.+...+++.......+..+    ..+..|...++.+ ....   +
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSG-la~glswl   82 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSG-LAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHH-HHHHHHHH
Confidence            578999999999999999999999899998888888887777744433333322    2334555444411 1111   1


Q ss_pred             HHH----------------HHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeec
Q 020761          244 SVL----------------TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  284 (321)
Q Consensus       244 ~~~----------------~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  284 (321)
                      ..+                ++|++++++++++++|++|..+++|+++|++|.++..+
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            111                67999999999999999999999999999999998775

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.90  E-value=7.8e-08  Score=79.30  Aligned_cols=239  Identities=12%  Similarity=0.071  Sum_probs=168.0

Q ss_pred             cCCChhHHHHHHHHHHHHHHHHHHhhhc---ccccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHH
Q 020761           48 LGVDAPITQSVLCYLSLALAYGGILLYR---RQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAI  124 (321)
Q Consensus        48 ~~~~~p~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~  124 (321)
                      .++.--+.+.+.+-+.+...+..+-+.+   .|  .++.+..+..+++.+..-+.-..++||.++...++..++..+.++
T Consensus        32 ~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR--~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iA  109 (309)
T COG5070          32 LGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR--LTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIA  109 (309)
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee--hhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhH
Confidence            3554455666666555544443332211   12  122223334455555554555689999999999999999999999


Q ss_pred             HHHHHHhhcchhHHHHHHHHHHHHhhhhhccccccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHhhccCC--hhhHH
Q 020761          125 VFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAEMAGGGGSRPLLGDILVIAGAIFFAMSYVGEEFLVKKID--RVEVV  202 (321)
Q Consensus       125 ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~--~~~~~  202 (321)
                      ....+++|.|.+..+..+.++.++.-+...++|.............|.+++...++..+.+....|+..+-.+  ..+.+
T Consensus       110 ygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtm  189 (309)
T COG5070         110 YGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTM  189 (309)
T ss_pred             hhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHH
Confidence            9999999999999999999999999888888775211111112337999999999999999999998776543  67789


Q ss_pred             HHHHHHHHHHHHHHHHhhcccccc-------cccchhhHH------------------HhHHHHHHHHHHHHHHHHHHHH
Q 020761          203 CMIGVYGLLVSVVQLSTLELKSLE-------SVKWSTDIL------------------SGATMLILSVLTSDMWAVILRI  257 (321)
Q Consensus       203 ~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~------------------~~a~~~~~~~~~~pv~~~~~~~  257 (321)
                      +|..+.+..+++.....+|.....       .....+..+                  .++...+..+.++-.-..+.|.
T Consensus       190 fYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGl  269 (309)
T COG5070         190 FYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGL  269 (309)
T ss_pred             HHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhh
Confidence            999999999985555555432111       101011111                  6777777777788888899999


Q ss_pred             HHhcccchHHHHhHHHHHhhhhheeeccCCC
Q 020761          258 FCYHQQVNWTYYLAFAAVLIGLIIYSTTAKD  288 (321)
Q Consensus       258 ~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  288 (321)
                      ++|+|+.+...+..+.+=..+-.+|.+.+++
T Consensus       270 vffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         270 VFFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             hhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988877776777766554

>TIGR00803 nst UDP-galactose transporter

Probab=98.80  E-value=1.7e-07  Score=80.39  Aligned_cols=174  Identities=14%  Similarity=0.196  Sum_probs=113.8

Q ss_pred             hhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccccc----------------ccC----CCCCc
Q 020761          108 SISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE----------------MAG----GGGSR  167 (321)
Q Consensus       108 ~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~----------------~~~----~~~~~  167 (321)
                      +........+..++++++..+.+.+||++..++++.++...|++.....|..                ++.    ....+
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~   82 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN   82 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence            3444566778888888888888888888888888888888887754333221                000    11124


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhhccCChh--hHHHHHHHHHHHHHHHHHHhhcc-cc---------cccccchhhHH
Q 020761          168 PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRV--EVVCMIGVYGLLVSVVQLSTLEL-KS---------LESVKWSTDIL  235 (321)
Q Consensus       168 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~-~~---------~~~~~~~~~~~  235 (321)
                      ...|....+.+.++.+...+.+++..|+.+..  .......+++.+.. ........ ..         .+...|.....
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFST-FSVLLWSDGTLISNFGFFIGYPTAVWIVGLL  161 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHH-HHHHhhcccchhhccCcccCCchHHHHHHHH
Confidence            56778888888888889999999987765322  12222222332222 11111111 10         01111111111


Q ss_pred             --------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhhee
Q 020761          236 --------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY  282 (321)
Q Consensus       236 --------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  282 (321)
                                    .++...++...++++++.+++.+++||+++..++.|+.+++.|+++|
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence                          77888888888999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.78  E-value=1.6e-07  Score=84.02  Aligned_cols=130  Identities=12%  Similarity=-0.015  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhccc-----ccchhhHHHHHHHHHHHHH-
Q 020761           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-----RLQVSWYWYLLLGFVDVQG-   96 (321)
Q Consensus        23 ~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~-   96 (321)
                      .|.+.+++.++++...+...++...  . ++...+.+.+.++++.+.+.......     .....|......+++.... 
T Consensus       150 ~G~l~~l~a~~~~a~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        150 WGAILILIASASWAFGSVWSSRLPL--P-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC--C-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            4555655555555555555555432  1 34455667777777776665543211     1234566666777765544 


Q ss_pred             HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761           97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus        97 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      +.++++++++.+++.++++.++.|++++++++++++|+++..+++|.++.+.|+.+...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999998866

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.78  E-value=2.2e-07  Score=85.12  Aligned_cols=135  Identities=16%  Similarity=0.128  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhc-cccc-------chhhHHHHHHHHHH
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR-RQRL-------QVSWYWYLLLGFVD   93 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~~-------~~~~~~~~~~g~~~   93 (321)
                      ..|.++....+++|.......++... .++++...+++...++++.+.+..... +...       .......+..++..
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t  266 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH
Confidence            44656654444444444555555543 453555666666666555554433321 1110       11111122233333


Q ss_pred             HHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761           94 VQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      ..++.++++++++.+++.+++..++.|++++++++++++|++++.+++|.++.+.|+.++...+
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            3347789999999999999999999999999999999999999999999999999999988654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.77  E-value=1.3e-07  Score=76.05  Aligned_cols=114  Identities=18%  Similarity=0.243  Sum_probs=90.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcc-------CChhhHHHHHHHHHHHHHHHHHHhhccccccc------------c-c-
Q 020761          171 GDILVIAGAIFFAMSYVGEEFLVKK-------IDRVEVVCMIGVYGLLVSVVQLSTLELKSLES------------V-K-  229 (321)
Q Consensus       171 G~~l~l~aa~~~a~~~v~~k~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------~-~-  229 (321)
                      |.++++.|.++.|++.++.|+..++       .++.+...+....+.+++.++....|......            . . 
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999998766       26888999999999999855555555432110            0 0 


Q ss_pred             chhhHH------------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeec
Q 020761          230 WSTDIL------------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYST  284 (321)
Q Consensus       230 ~~~~~~------------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  284 (321)
                      +.....                  .++...++......+..++.++++++|+++..++.|.++.+.|+++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            110100                  7888888888899999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.75  E-value=3.1e-07  Score=82.11  Aligned_cols=133  Identities=15%  Similarity=-0.027  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccc---cchhhHHHHHHHHHHHHH-H
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR---LQVSWYWYLLLGFVDVQG-N   97 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~~~-~   97 (321)
                      ..|.++++..++.+.......++.. ++. +|....+. ..++++.+.+........   ....+...+..|++.... +
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~-~~~-~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~  223 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAG-AEH-GPATVAIG-SLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPY  223 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHh-ccC-CchHHHHH-HHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            3566676555655555555556654 344 56665544 445555555554433221   112233345667665555 7


Q ss_pred             HHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761           98 FLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus        98 ~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      .++++++++.+++.++++.++.|+++.++++++++|+++..+++|..+.+.|++......
T Consensus       224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            899999999999999999999999999999999999999999999999999999986644

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.67  E-value=1.1e-07  Score=73.33  Aligned_cols=103  Identities=19%  Similarity=0.295  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhccc---ccccccchhhHH-------------------Hh
Q 020761          180 IFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELK---SLESVKWSTDIL-------------------SG  237 (321)
Q Consensus       180 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~-------------------~~  237 (321)
                      ++||.+.+..|+..++.|+...+.+.+..+.+ ..+.....+..   ..+...+.....                   .+
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            46889999999999999999999999999987 42333333322   122222221111                   66


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheee
Q 020761          238 ATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  283 (321)
Q Consensus       238 a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  283 (321)
                      +...+....++|+++.++++++++|++++.+++|+.+++.|+++.+
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            6677777778999999999999999999999999999999988754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.59  E-value=1.3e-06  Score=78.12  Aligned_cols=128  Identities=17%  Similarity=0.019  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhccc----ccchhhHHHHHHHHHHHHHHH
Q 020761           23 YLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ----RLQVSWYWYLLLGFVDVQGNF   98 (321)
Q Consensus        23 ~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~   98 (321)
                      .|.++.++.++++...+...++... +. +|.....   ...+..+.+.......    .....|...+..+.....++.
T Consensus       156 ~G~~~~l~aa~~~A~~~v~~k~~~~-~~-~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~  230 (295)
T PRK11689        156 LSYGLAFIGAFIWAAYCNVTRKYAR-GK-NGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYA  230 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccC-CC-CchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            3556655555555555666666643 34 5554322   2223333322221211    112344444555544444599


Q ss_pred             HHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761           99 LFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus        99 ~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      ++++++++.+++.++.+.++.|++.+++++++++|+++..+++|.++.+.|+.+...
T Consensus       231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999999999999999999988765

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.59  E-value=5.7e-06  Score=73.85  Aligned_cols=64  Identities=27%  Similarity=0.397  Sum_probs=58.6

Q ss_pred             HHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761           94 VQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      ..+..+.+.|+.+.|++..+++..+.-++..+++..++|||+++.++.|..+++.|..++....
T Consensus        61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            3447788899999999999999999999999999999999999999999999999999877643

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.57  E-value=2.8e-06  Score=76.26  Aligned_cols=136  Identities=16%  Similarity=0.099  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHhh-hcc---------cccchhhHHHHHHH
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDLGV-DAPITQSVLCYLSLALAYGGILL-YRR---------QRLQVSWYWYLLLG   90 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~~~-~~p~~~~~~r~~~~~l~l~~~~~-~~~---------~~~~~~~~~~~~~g   90 (321)
                      ..|..+.++.++++.......++...+.- ........+..+.+.+.+..... ...         ......|...+..|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            35777776666666666777777653221 12223333334443333322211 111         11223566666777


Q ss_pred             HHHHHH-HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761           91 FVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus        91 ~~~~~~-~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      .+.... +.+++.++++.+++.++.+..+.|++..++++++++|+++..+++|.++.+.|+.+...+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            766655 8889999999999999999999999999999999999999999999999999999887644

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.57  E-value=1.3e-06  Score=66.17  Aligned_cols=66  Identities=8%  Similarity=-0.021  Sum_probs=58.9

Q ss_pred             HHHHHHH-HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761           90 GFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus        90 g~~~~~~-~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      +.+..+. ..++..+++..|.+.+..+.++.++++.+++++++|||++++|++|+.+.++|++++..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3344444 88889999999999999999999999999999999999999999999999999988754

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.53  E-value=4.4e-05  Score=68.91  Aligned_cols=206  Identities=12%  Similarity=0.074  Sum_probs=129.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHh-hcCchHHHHHHHHHHhhcch-------hHHHHHHHHHHHHhh
Q 020761           79 LQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRY-------SVWQLFGASLCVLGL  150 (321)
Q Consensus        79 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ils~l~l~er~-------~~~~~~~~~l~~~Gv  150 (321)
                      ....+..-++.|.+...++..++.+++|..++.+.++ ..+.-+...++..++++|-.       ......|+++.++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            3445566677788888889999999999999999877 47888899999999988654       234677899999999


Q ss_pred             hhhccccccccC------CCCCcchhhhHHHHHHHHHHHHHH-------HHHHHhh-ccCChhhHHHHHHH---HHHHHH
Q 020761          151 GLMLLSDAEMAG------GGGSRPLLGDILVIAGAIFFAMSY-------VGEEFLV-KKIDRVEVVCMIGV---YGLLVS  213 (321)
Q Consensus       151 ~l~~~~~~~~~~------~~~~~~~~G~~l~l~aa~~~a~~~-------v~~k~~~-~~~~~~~~~~~~~~---~~~~~~  213 (321)
                      ++........+.      +.+.+...|++.++++.+.++.|.       ...+... ...++.....-+..   .+.++.
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~  228 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAIT  228 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH
Confidence            999883322111      123455699999999999999999       4444321 12233322222221   333333


Q ss_pred             HHHHHhh---ccccc----cc-cc----chhh---HH-------------HhHH---------HHHHHHHHHHHHHHHHH
Q 020761          214 VVQLSTL---ELKSL----ES-VK----WSTD---IL-------------SGAT---------MLILSVLTSDMWAVILR  256 (321)
Q Consensus       214 ~i~~~~~---~~~~~----~~-~~----~~~~---~~-------------~~a~---------~~~~~~~~~pv~~~~~~  256 (321)
                      -..+-.+   .....    +. .+    +...   ++             .++.         -..+.+.+..+++.+++
T Consensus       229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwG  308 (345)
T PRK13499        229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWG  308 (345)
T ss_pred             HHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhh
Confidence            2222221   11111    10 00    2110   11             1111         11133345678899999


Q ss_pred             HHHhcccch------HHHHhHHHHHhhhhheeecc
Q 020761          257 IFCYHQQVN------WTYYLAFAAVLIGLIIYSTT  285 (321)
Q Consensus       257 ~~~~~e~~~------~~~~~G~~li~~g~~l~~~~  285 (321)
                      .+ +||.=+      ...++|+++++.|..+....
T Consensus       309 i~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        309 LV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            84 899866      67789999999988776544

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.51  E-value=6.5e-07  Score=79.58  Aligned_cols=68  Identities=25%  Similarity=0.224  Sum_probs=59.8

Q ss_pred             HHHHHHHHH-HHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 020761           85 WYLLLGFVD-VQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGL  152 (321)
Q Consensus        85 ~~~~~g~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l  152 (321)
                      .....+.+. ..++.++++++++.+++.++...++.|++..+++++++||+++..+++|..+.++|+.+
T Consensus       212 ~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       212 PSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            344444444 44588999999999999999999999999999999999999999999999999999976

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.48  E-value=2.2e-06  Score=76.44  Aligned_cols=130  Identities=12%  Similarity=0.120  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHH----HHHHHHHHHhhhcccccchhhHHHHHHHHHHHHH
Q 020761           21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYL----SLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQG   96 (321)
Q Consensus        21 ~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~   96 (321)
                      ..+|++.+++.++..+......+..   +. +|...++....    .+.++..+. .+.++...+..+..++.|++...+
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~-~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gi~~~ia  224 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF---GV-DGLSVLLPQAIGMVIGGIIFNLGH-ILAKPLKKYAILLNILPGLMWGIG  224 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc---CC-CcceehhHHHHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHH
Confidence            3568888888877776666555544   24 67776444433    333333332 111222222333455577776555


Q ss_pred             HHHHHHhhh-cchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHH----HHHHHHHHhhhhhcc
Q 020761           97 NFLFNKAFQ-FTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQL----FGASLCVLGLGLMLL  155 (321)
Q Consensus        97 ~~~~~~al~-~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~----~~~~l~~~Gv~l~~~  155 (321)
                      +.+|+.+.+ +.+++.++++.+..|+...+++++++||+.+++++    +|.++.+.|+.++..
T Consensus       225 ~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       225 NFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            889999999 99999999999999999999999999999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.47  E-value=3.9e-06  Score=75.20  Aligned_cols=71  Identities=11%  Similarity=0.201  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccc
Q 020761           86 YLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (321)
Q Consensus        86 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~  156 (321)
                      ....|.....++.++++++++.+++.++++.++.|++..++++++++|+++..++.|.++.++|+.++...
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            33445555556999999999999999999999999999999999999999999999999999998887663

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.46  E-value=7.9e-06  Score=65.56  Aligned_cols=128  Identities=15%  Similarity=0.115  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHhc-----CCChhHHHHHHHHHHHHHHHHHHhhhc-ccc---------------cchhh
Q 020761           25 LLLGQLVSFSLALSSFTTAVITDL-----GVDAPITQSVLCYLSLALAYGGILLYR-RQR---------------LQVSW   83 (321)
Q Consensus        25 ~~~~~~~a~~~~~~~~~~~~l~~~-----~~~~p~~~~~~r~~~~~l~l~~~~~~~-~~~---------------~~~~~   83 (321)
                      .++++..++....-....++...+     ...+|..+..+.-..+.+.+.+..... +..               .++.+
T Consensus         2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T PF03151_consen    2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI   81 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence            344445555555556666665544     234889988888888888887765422 111               11233


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 020761           84 YWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGL  152 (321)
Q Consensus        84 ~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l  152 (321)
                      ...+..|.+....++..+..++++++...+++.....+.+.++++++++|+++..++.|++++++|+.+
T Consensus        82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            444455666666699999999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.43  E-value=2.8e-06  Score=76.29  Aligned_cols=135  Identities=13%  Similarity=0.093  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHHhhhccc-c-cch---------h---hHH-
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDL-GVDAPITQSVLCYLSLALAYGGILLYRRQ-R-LQV---------S---WYW-   85 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~-~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~-~~~---------~---~~~-   85 (321)
                      ..|.+++++.++.+.......++...+ +. +|.....+....+.+.+.|....... . ...         .   ... 
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            356666655555555545555555432 45 88888888888888888877553211 1 110         0   011 


Q ss_pred             HHHHHHHHHH-HHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761           86 YLLLGFVDVQ-GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus        86 ~~~~g~~~~~-~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      .+..+..... .+.+++.+++++++..+++.....|++++++++++++|+++..+++|.+++++|+.+....+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            1111221111 24566789999999999999999999999999999999999999999999999999876643

specificities overlap.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.35  E-value=2.5e-05  Score=69.19  Aligned_cols=132  Identities=28%  Similarity=0.312  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHH-HHHHHHHHHHHHHhhhcc--cccchhhHHHHHHHHHHHH-H
Q 020761           21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSV-LCYLSLALAYGGILLYRR--QRLQVSWYWYLLLGFVDVQ-G   96 (321)
Q Consensus        21 ~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~-~   96 (321)
                      ...|..++.+.++.+.......++..  .. ++..... +.+........+......  ......+......|.+... +
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS--RL-GPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc--CC-ChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHH
Confidence            45667776666666665566655555  32 4555554 333322332322222222  2334567777777887775 5


Q ss_pred             HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761           97 NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus        97 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      +.+++++++..+++.++++..+.|++..++++++++|+++..++.|..+.+.|+.+...
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999998865

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.33  E-value=4.3e-06  Score=73.07  Aligned_cols=69  Identities=22%  Similarity=0.441  Sum_probs=60.8

Q ss_pred             HHHH-HHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccc
Q 020761           90 GFVD-VQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (321)
Q Consensus        90 g~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~  158 (321)
                      |.+- ..+...-|.|+.|.|++..+++..+..+..++++..+++||+++...+|..++++|-.+++....
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP  139 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP  139 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC
Confidence            4433 33477788999999999999999999999999999999999999999999999999999988443

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.22  E-value=4.1e-05  Score=70.23  Aligned_cols=132  Identities=12%  Similarity=0.062  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhc------CCChhHHHHHHHHHHHHHHHHHHhh-hccccc-----------ch-h
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDL------GVDAPITQSVLCYLSLALAYGGILL-YRRQRL-----------QV-S   82 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~------~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~~-----------~~-~   82 (321)
                      +.|.+++++.++.+..-+...++...+      .. ++.....+...+++++++|+.. ......           .. .
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENL-TASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccC-CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            467777766665555557777776543      13 4555555556777777777654 211100           01 1


Q ss_pred             hHHHHHHHHHHHHH----HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhc
Q 020761           83 WYWYLLLGFVDVQG----NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (321)
Q Consensus        83 ~~~~~~~g~~~~~~----~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~  154 (321)
                      +...+...+.....    +.+.+++++++++.++++..++.|++++++++++++|+++..+++|.+++++|+.+-.
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            11111112222222    4444469999999999999999999999999999999999999999999999998754

>TIGR00688 rarD rarD protein

Probab=98.14  E-value=3.4e-05  Score=67.54  Aligned_cols=112  Identities=13%  Similarity=0.183  Sum_probs=83.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHH-hhccc-----ccc---cccchhhH-H----
Q 020761          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLS-TLELK-----SLE---SVKWSTDI-L----  235 (321)
Q Consensus       170 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~-----~~~---~~~~~~~~-~----  235 (321)
                      .|..+.++++++|+...+..|. ..+.+|.+..++-++++.++. .+.. ...+.     ..+   ...+.... .    
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFM-LLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHH-HHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4889999999999999999998 456899999999999988776 3332 22210     111   11111000 0    


Q ss_pred             --------------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheee
Q 020761          236 --------------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  283 (321)
Q Consensus       236 --------------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  283 (321)
                                    .++...++...+.|+++.++++++++|+++..+++|..+.+.|+.+..
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence                          445566666778999999999999999999999999999999987654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.08  E-value=1.7e-05  Score=61.58  Aligned_cols=70  Identities=19%  Similarity=0.277  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHH-HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHH--HhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761           86 YLLLGFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWV--FLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus        86 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l--~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      ++..|+..... ..++.++++..|++.+.++.+..+.++.+.++.  ++||++++.+++|+++.++|+.++..
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            45666665555 889999999999999999999999889888885  89999999999999999999999876

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.95  E-value=9.3e-05  Score=57.46  Aligned_cols=109  Identities=8%  Similarity=0.119  Sum_probs=64.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHH-------------HHHHHHHHHHHHHhhcccccccccchhhHHH
Q 020761          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMI-------------GVYGLLVSVVQLSTLELKSLESVKWSTDILS  236 (321)
Q Consensus       170 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  236 (321)
                      .|.++.+.+.++.+..+++.|+-.++.+..+.....             ...+.+...+....+.. ....        .
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~~~~~~~p~~~i~lgl~~~~la~~~w~~-aL~~--------~   72 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAALLAFGLALRAVLLGLAGYALSMLCWLK-ALRY--------L   72 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-HHHh--------C
Confidence            378899999999999999999988776433221110             00111111111111110 0000        1


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHH--HhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          237 GATMLILSVLTSDMWAVILRIF--CYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       237 ~a~~~~~~~~~~pv~~~~~~~~--~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                      +...+.-.....+++..+.++.  ++||++|+.+++|+.+|++|+++.++.++
T Consensus        73 ~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         73 PLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            1222222223345666666664  89999999999999999999999886544

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.91  E-value=0.00014  Score=63.32  Aligned_cols=121  Identities=11%  Similarity=0.018  Sum_probs=79.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHH-hhh-cccccchhhHHHHHHHHHHHH
Q 020761           18 ALRTLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGI-LLY-RRQRLQVSWYWYLLLGFVDVQ   95 (321)
Q Consensus        18 ~~~~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~-~~~-~~~~~~~~~~~~~~~g~~~~~   95 (321)
                      .++..+++....+.++..|.-..+.+..   +. +|....+-. .++.++-..+ ... +++..++..+.-++-|++...
T Consensus       133 ~~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~-~~~~~~lPq-aiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~i  207 (269)
T PF06800_consen  133 KSNMKKGILALLISTIGYWIYSVIPKAF---HV-SGWSAFLPQ-AIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGI  207 (269)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHhc---CC-ChhHhHHHH-HHHHHHHHHHHhhcccccccccchHHhhHHHHHHHH
Confidence            3455667776656655555554443332   22 444433322 2222222111 111 222223333456788999999


Q ss_pred             HHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHH
Q 020761           96 GNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGA  143 (321)
Q Consensus        96 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~  143 (321)
                      ++++++.+.+....+.+-.+.++.++...+.+.+++||+=+++++...
T Consensus       208 gnl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~  255 (269)
T PF06800_consen  208 GNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT  255 (269)
T ss_pred             HHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence            999999999999999999999999999999999999999998877543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.89  E-value=2.9e-07  Score=77.16  Aligned_cols=247  Identities=14%  Similarity=0.110  Sum_probs=148.0

Q ss_pred             HHHHHHHhH-HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhh-cccccchhhHHHHHHHHHHHHHHHHHHHhhhcc
Q 020761           30 LVSFSLALS-SFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY-RRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFT  107 (321)
Q Consensus        30 ~~a~~~~~~-~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~  107 (321)
                      +...+.||+ .+++.|...    .|..++.-..+.+.++-..+++. ++....+.+..-++.|.....++...+.|.++.
T Consensus         8 L~P~l~WGsip~v~~k~GG----~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~i   83 (288)
T COG4975           8 LLPALGWGSIPLVANKFGG----KPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQFKAIQLI   83 (288)
T ss_pred             HHHHHHhcccceeeeecCC----ChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhhhheeee
Confidence            555677777 444444432    55555544333333332222222 333444555555667777888899999999999


Q ss_pred             hhhHHHHhh-cCchHHHHHHHHHHhhcchhHHHH----HHHHHHHHhhhhhcccccc-ccCCCCCcchhhhHHHHHHHHH
Q 020761          108 SISSVTLLD-CCAIPCAIVFTWVFLGTRYSVWQL----FGASLCVLGLGLMLLSDAE-MAGGGGSRPLLGDILVIAGAIF  181 (321)
Q Consensus       108 ~~~~~~~i~-~~~pi~~~ils~l~l~er~~~~~~----~~~~l~~~Gv~l~~~~~~~-~~~~~~~~~~~G~~l~l~aa~~  181 (321)
                      +++.+.++. .+.-+-+.+++++.++|..+..+.    .++++.++|+.+-.+.|.+ .+.++.++.-.|....+.+.+.
T Consensus        84 GVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~G  163 (288)
T COG4975          84 GVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLG  163 (288)
T ss_pred             eeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccc
Confidence            999999986 455677889999999999887654    4778889999998887752 1222333455899999999999


Q ss_pred             HHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcc-cccccccchhhHH-----Hh-------HHHHH-----H
Q 020761          182 FAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLEL-KSLESVKWSTDIL-----SG-------ATMLI-----L  243 (321)
Q Consensus       182 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~-----~~-------a~~~~-----~  243 (321)
                      |-.|.++.+...  .|-.....-+. .|.++..+....... ....+..|...+-     .+       +....     -
T Consensus       164 Yv~yvvl~~~f~--v~g~saiLPqA-iGMv~~ali~~~~~~~~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FS  240 (288)
T COG4975         164 YVGYVVLFQLFD--VDGLSAILPQA-IGMVIGALILGFFKMEKRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFS  240 (288)
T ss_pred             eeeeEeeecccc--ccchhhhhHHH-HHHHHHHHHHhhcccccchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeee
Confidence            999999988753  33333222222 222222122222221 1112222221111     11       11100     1


Q ss_pred             HHHHHHHHHHHHHHHHhcccchHHH----HhHHHHHhhhhheee
Q 020761          244 SVLTSDMWAVILRIFCYHQQVNWTY----YLAFAAVLIGLIIYS  283 (321)
Q Consensus       244 ~~~~~pv~~~~~~~~~~~e~~~~~~----~~G~~li~~g~~l~~  283 (321)
                      ...+..+++.+-+.++++|+-|..+    ++|+++++.|..+..
T Consensus       241 lSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         241 LSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             HhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            1224577788888899999888754    567777777765543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.80  E-value=0.00048  Score=51.61  Aligned_cols=66  Identities=17%  Similarity=0.229  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHHhhhcchhhHHH-HhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhh
Q 020761           88 LLGFVDVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM  153 (321)
Q Consensus        88 ~~g~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~  153 (321)
                      ..-.....+.+++..++++.|.+.+- +-...-.+.+.+.+++++||++++.|++++.+.+.|++.+
T Consensus        40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            33333344477888999999999975 4457889999999999999999999999999999999876

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.70  E-value=0.0005  Score=52.44  Aligned_cols=64  Identities=14%  Similarity=0.172  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHhhhcchhhHHHHh-hcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccc
Q 020761           93 DVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~  156 (321)
                      ...+.+++..++++.|.+.+-.+ .....+.+.+++.++++|++++.+++++.+.++|++++-..
T Consensus        40 ~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         40 ISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            34448888999999999998766 47889999999999999999999999999999999988553

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.67  E-value=0.00048  Score=50.86  Aligned_cols=63  Identities=16%  Similarity=0.198  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHhhhcchhhHHH-HhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761           93 DVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      ......++-.++++.|.+.+- +-...-.+.+.+.+++++|||++..+++++.+.++|++.+-.
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            344477888999999999874 556888999999999999999999999999999999988744

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.66  E-value=0.0023  Score=48.80  Aligned_cols=40  Identities=3%  Similarity=0.335  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          248 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       248 ~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                      ..+...+.++++|+|++|+.+++|+.+|+.|++..+...+
T Consensus        67 G~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         67 GILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            5666788999999999999999999999999999876553

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.57  E-value=0.0012  Score=49.15  Aligned_cols=62  Identities=18%  Similarity=0.108  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHhhhcchhhHHH-HhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhc
Q 020761           93 DVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~  154 (321)
                      ...+.+++..+++..|.+.+- +-...-.+.+.+.+++++||++++.+++++.+.++|++.+-
T Consensus        39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            344477888999999999875 44678899999999999999999999999999999998874

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.55  E-value=0.0024  Score=57.33  Aligned_cols=134  Identities=15%  Similarity=0.100  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhh--ccc---------ccchhhHHHHHHHHH
Q 020761           24 LLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLY--RRQ---------RLQVSWYWYLLLGFV   92 (321)
Q Consensus        24 ~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~~---------~~~~~~~~~~~~g~~   92 (321)
                      |+++..+..++-...+..-.+...+.-.++.+..++..+.+.+..++....  ..+         ..+.-+...+....+
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            766654444444445555555554333388888888887777776655544  211         122234555666777


Q ss_pred             HHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761           93 DVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      +..++.+.+.-.+..++...+++..+.-+++.+++.+++++++++.+|.|+++.+.|..+=...+
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~  299 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK  299 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence            77777777788899999999999999999999999999999999999999999999998876633

; GO: 0055085 transmembrane transport

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.54  E-value=0.0012  Score=49.63  Aligned_cols=62  Identities=16%  Similarity=0.340  Sum_probs=54.6

Q ss_pred             HHHHHHHHHhhhcchhhHHHHh-hcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761           94 VQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      ..+..++..++++.|.+.+-.+ .....+.+.+++++++||++++.+++|+.+.++|++++-.
T Consensus        41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3347778899999999998666 5688899999999999999999999999999999999854

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.44  E-value=0.0056  Score=46.06  Aligned_cols=102  Identities=10%  Similarity=0.025  Sum_probs=60.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHhHHHHHHHHHHHHHH
Q 020761          172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMW  251 (321)
Q Consensus       172 ~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~  251 (321)
                      .++.+++.++........|+..+..++.........++..+...... .  ...|.   .   ..-+.-..+    ..+.
T Consensus         4 wl~L~~a~~~Ev~~~~~lK~s~gf~~~~~~i~~~~~~~~sf~~l~~a-l--~~ipl---~---iAYavw~Gl----G~v~   70 (110)
T PRK09541          4 YIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQT-L--AYIPT---G---IAYAIWSGV----GIVL   70 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH-H--hhCCc---h---hHHHHHHHH----HHHH
Confidence            45677788888888888887643223333222222222222211111 1  11221   1   011111122    5566


Q ss_pred             HHHHHHHHhcccchHHHHhHHHHHhhhhheeeccC
Q 020761          252 AVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  286 (321)
Q Consensus       252 ~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  286 (321)
                      +.+.++++|+|++++.+++|+.+|+.|++..+...
T Consensus        71 ~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         71 ISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            78999999999999999999999999999987544

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.43  E-value=0.004  Score=47.03  Aligned_cols=37  Identities=16%  Similarity=0.365  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheee
Q 020761          247 TSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  283 (321)
Q Consensus       247 ~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  283 (321)
                      +.++++.+.+++++||++++.+++|..+++.|+++..
T Consensus        72 l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         72 LNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999997754

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.33  E-value=0.0039  Score=54.27  Aligned_cols=117  Identities=11%  Similarity=0.136  Sum_probs=85.4

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcc-ccc---ccccch------------
Q 020761          168 PLLGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLEL-KSL---ESVKWS------------  231 (321)
Q Consensus       168 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~---~~~~~~------------  231 (321)
                      ...|+++++.+-+.|+....+.|-. +..++.+...+-.+.+.++..+....... .+.   -..+..            
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~   83 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG   83 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            3479999999999999999998865 55688899888888888877444333221 111   011111            


Q ss_pred             --hhHH------HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeecc
Q 020761          232 --TDIL------SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  285 (321)
Q Consensus       232 --~~~~------~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  285 (321)
                        |...      ....-+++..+++|++.++++.++++|+++..|++...+..+|+..-.+.
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence              0000      34555667777899999999999999999999999999999999876543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.19  E-value=0.009  Score=50.93  Aligned_cols=104  Identities=14%  Similarity=-0.041  Sum_probs=77.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcccccchhh---HHHHHHHHHHHHH-HHHHHHhhhcchhhHHHHhhcCchHHHHHHH
Q 020761           52 APITQSVLCYLSLALAYGGILLYRRQRLQVSW---YWYLLLGFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFT  127 (321)
Q Consensus        52 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~i~~~~pi~~~ils  127 (321)
                      +.-.-+..-+++++++.+|+-.....+.-.++   ..-+..+++.... +.+=..++...|...-+++.++.|.+..+.+
T Consensus       175 ~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G  254 (292)
T COG5006         175 HGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSG  254 (292)
T ss_pred             CCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHH
Confidence            44444556677888888887664433322222   2233445555555 7777899999999999999999999999999


Q ss_pred             HHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761          128 WVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus       128 ~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      +++++|+++..||+++...+.+..-.+.
T Consensus       255 ~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         255 LIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            9999999999999999988877764443

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.17  E-value=0.014  Score=45.84  Aligned_cols=120  Identities=17%  Similarity=0.191  Sum_probs=85.2

Q ss_pred             HHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhccc-c---c-chhhHHHHHHHHHHHHHHHHHHHhhh
Q 020761           31 VSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQ-R---L-QVSWYWYLLLGFVDVQGNFLFNKAFQ  105 (321)
Q Consensus        31 ~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~---~-~~~~~~~~~~g~~~~~~~~~~~~al~  105 (321)
                      .-......+....++.++ ..+|..-++..+..+.+.+..+....++ .   . +.+|+ +..-|.++...-.+..+..+
T Consensus         9 aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~vp   86 (138)
T PF04657_consen    9 AGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILVP   86 (138)
T ss_pred             HHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHhh
Confidence            333444445555566543 2269999999999998888776654433 2   2 22444 45577888888888888889


Q ss_pred             cchhhHHHHh-hcCchHHHHHHHHH----HhhcchhHHHHHHHHHHHHhhhh
Q 020761          106 FTSISSVTLL-DCCAIPCAIVFTWV----FLGTRYSVWQLFGASLCVLGLGL  152 (321)
Q Consensus       106 ~~~~~~~~~i-~~~~pi~~~ils~l----~l~er~~~~~~~~~~l~~~Gv~l  152 (321)
                      ..+++....+ ..-+-+...++.++    .-|+++++.|.+|+++.++|+.+
T Consensus        87 ~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   87 RLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            9988887655 45566777777775    46799999999999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.12  E-value=0.0043  Score=55.54  Aligned_cols=110  Identities=15%  Similarity=0.227  Sum_probs=70.5

Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHHhhccCCh---------hh----HHHHHHHHHHHHHHHHHHhhcccccccccchh
Q 020761          166 SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR---------VE----VVCMIGVYGLLVSVVQLSTLELKSLESVKWST  232 (321)
Q Consensus       166 ~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~---------~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  232 (321)
                      .+...|..+++.|+++.+....++|+...+.+.         ..    ..+|..+....+.       +..     +...
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g-------~~~-----~~~A   70 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLG-------EIL-----NFVA   70 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcc-------hHH-----HHHH
Confidence            356789999999999999999999997555432         01    1122221111100       000     0111


Q ss_pred             hHHHhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          233 DILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       233 ~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                      .....+....-...+..+++.+++..+++|+++..++.|+.+++.|..+......
T Consensus        71 l~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~  125 (300)
T PF05653_consen   71 LGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP  125 (300)
T ss_pred             HHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence            1112233333334457889999999999999999999999999999877665443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.93  E-value=0.0075  Score=52.26  Aligned_cols=115  Identities=19%  Similarity=0.175  Sum_probs=60.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhHH---------------
Q 020761          171 GDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDIL---------------  235 (321)
Q Consensus       171 G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------------  235 (321)
                      |.+.++.|+++++-..+=.||.- ..|.....++.+....+...+.....+.+.+.+.......+               
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~i   79 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-TGDGFFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIKTI   79 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhhh
Confidence            56778899999998888888754 34666555555544444442222222222221111010111               


Q ss_pred             ---HhHHHHHHHHHHHHHHHHHHHHH-Hhccc-----chHHHHhHHHHHhhhhheeeccCCCC
Q 020761          236 ---SGATMLILSVLTSDMWAVILRIF-CYHQQ-----VNWTYYLAFAAVLIGLIIYSTTAKDL  289 (321)
Q Consensus       236 ---~~a~~~~~~~~~~pv~~~~~~~~-~~~e~-----~~~~~~~G~~li~~g~~l~~~~~~~~  289 (321)
                         .+..+-+   ..+.+.+-..+-+ +|+++     -++..++|.+++++|..++..-|++.
T Consensus        80 GLglg~liW~---s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   80 GLGLGMLIWG---SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hhHHHHHHHH---HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence               1111111   1234444444432 44432     34678999999999988887655443

The region concerned is approximately 280 residues long.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.93  E-value=0.015  Score=52.70  Aligned_cols=51  Identities=18%  Similarity=0.267  Sum_probs=42.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          237 GATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       237 ~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                      +.....+......++++++++++++++.++.+++|+++.+.|+.+......
T Consensus       104 svtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen  104 SVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             cHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            333334444468999999999999999999999999999999998877654

Some of the sequences in this family are annotated as putative membrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.85  E-value=0.0085  Score=43.71  Aligned_cols=54  Identities=15%  Similarity=0.156  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHhhhcchhhHHHHh-hcCchHHHHHHHHHHhhcchhHHHHHHHHHH
Q 020761           93 DVQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLC  146 (321)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ils~l~l~er~~~~~~~~~~l~  146 (321)
                      ......++..++++.|.+.+-.+ ..+..+.+.+.+.+++||++|..|++|+.+.
T Consensus        39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34447788899999999998655 5689999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.76  E-value=0.047  Score=42.94  Aligned_cols=111  Identities=19%  Similarity=0.227  Sum_probs=75.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhccCC-hhhHHHHHHHHHHHHHHHHHHhhccccc---ccccchhhH---H--------
Q 020761          171 GDILVIAGAIFFAMSYVGEEFLVKKID-RVEVVCMIGVYGLLVSVVQLSTLELKSL---ESVKWSTDI---L--------  235 (321)
Q Consensus       171 G~~l~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~---~--------  235 (321)
                      ..++++.+.++.++....+.++.++.+ |.......+..+++...+.....+..+.   +..+|....   +        
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~   81 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHH
Confidence            467889999999999999999988875 9999999999999988665555444222   222332211   1        


Q ss_pred             ------HhHHHHH-HHHHHHHHHHHHHHHH----HhcccchHHHHhHHHHHhhhhhe
Q 020761          236 ------SGATMLI-LSVLTSDMWAVILRIF----CYHQQVNWTYYLAFAAVLIGLII  281 (321)
Q Consensus       236 ------~~a~~~~-~~~~~~pv~~~~~~~~----~~~e~~~~~~~~G~~li~~g~~l  281 (321)
                            .++.... +...-+.+.+++++.+    .-++++++.+.+|..++++|+++
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence                  2222222 2233456666777764    33478999999999999999864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.74  E-value=0.0027  Score=47.75  Aligned_cols=69  Identities=17%  Similarity=0.252  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcchhhHHHHhh-cCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhh
Q 020761           85 WYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD-CCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLM  153 (321)
Q Consensus        85 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~  153 (321)
                      +|.+.=.++..+...|++.+...+.+.+.++. ++.=++|++.++++.+|..+++.++|+++.+.|+.++
T Consensus        43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            35555556777799999999999999999885 8888999999988888888889999999999999765

Many members are annotated as potential transmembrane proteins.

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.62  E-value=0.083  Score=39.34  Aligned_cols=38  Identities=18%  Similarity=0.190  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeecc
Q 020761          248 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTT  285 (321)
Q Consensus       248 ~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  285 (321)
                      ..+.+.+.++++|+|++|+.++.|+.+++.|++..+..
T Consensus        66 G~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         66 GAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            55667889999999999999999999999999987643

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.57  E-value=0.009  Score=53.50  Aligned_cols=135  Identities=14%  Similarity=0.150  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHh---cCCChhHHHHHHHHHHHHHHHH-HHhhhccc---------ccchhhHHHH
Q 020761           21 TLYLLLLGQLVSFSLALSSFTTAVITD---LGVDAPITQSVLCYLSLALAYG-GILLYRRQ---------RLQVSWYWYL   87 (321)
Q Consensus        21 ~~~~~~~~~~~a~~~~~~~~~~~~l~~---~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~---------~~~~~~~~~~   87 (321)
                      .+.|....+...+....-+...+++..   +.+ ++..+..+.--++...++ |+.....+         +..-+.....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH
Confidence            467766665555555555777777663   245 777777776666777777 66554321         1112223334


Q ss_pred             HHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccc
Q 020761           88 LLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (321)
Q Consensus        88 ~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~  156 (321)
                      ...++....|...|..+..+++.+.++.....-.++...++++++++.++.+.+|.++++.|+.+=...
T Consensus       240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~  308 (316)
T KOG1441|consen  240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA  308 (316)
T ss_pred             HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence            444555666889999999999999999999999999999999999999999999999999999875543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=96.57  E-value=0.0047  Score=46.81  Aligned_cols=45  Identities=18%  Similarity=0.327  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          243 LSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       243 ~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                      ....++|+++.++++++++|+++..++.|.+++++|+++..+.+.
T Consensus        65 ~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   65 AIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            445569999999999999999999999999999999998886553

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.53  E-value=0.1  Score=39.15  Aligned_cols=101  Identities=8%  Similarity=0.054  Sum_probs=57.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHhHHHHHHHHHHHH
Q 020761          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSD  249 (321)
Q Consensus       170 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~p  249 (321)
                      ...++.+++.++--......|+..+-.++.........++..+..+-..   ....|.          ...+.+-.-...
T Consensus         7 ~~~~~L~~Ai~~Ev~~t~~Lk~s~gf~~~~~~~~~~~~~~~sf~~Ls~a---l~~lpv----------gvAYAvW~GiG~   73 (109)
T PRK10650          7 IHAAWLALAIVLEIVANIFLKFSDGFRRKIYGILSLAAVLAAFSALSQA---VKGIDL----------SVAYALWGGFGI   73 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHH---HhhCch----------HHHHHHHHHHHH
Confidence            4566677778888888888776533223332222222111111101111   112221          111111111255


Q ss_pred             HHHHHHHHHHhcccchHHHHhHHHHHhhhhheee
Q 020761          250 MWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYS  283 (321)
Q Consensus       250 v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  283 (321)
                      +.+.+.++++|+|++++.++.|+.+|+.|++..+
T Consensus        74 v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         74 AATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            6678889999999999999999999999998764

>TIGR00803 nst UDP-galactose transporter

Probab=96.53  E-value=0.027  Score=48.06  Aligned_cols=67  Identities=15%  Similarity=0.257  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhh
Q 020761           86 YLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGL  152 (321)
Q Consensus        86 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l  152 (321)
                      .....+.+.....+..+.++|.+....++...+.++++.+++.++++|+++..++.|+.+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3344455555578889999999999999999999999999999999999999999999999988753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.32  E-value=0.15  Score=37.83  Aligned_cols=39  Identities=13%  Similarity=0.238  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccC
Q 020761          248 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  286 (321)
Q Consensus       248 ~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  286 (321)
                      -.+.+.+.++++|+|+.+..+++|..++++|++..+...
T Consensus        67 G~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          67 GIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            566688899999999999999999999999998877543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.19  E-value=0.91  Score=40.90  Aligned_cols=166  Identities=13%  Similarity=0.136  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhc----------ccccchhhHHHHHHHH
Q 020761           22 LYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYR----------RQRLQVSWYWYLLLGF   91 (321)
Q Consensus        22 ~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~----------~~~~~~~~~~~~~~g~   91 (321)
                      ..|++.-.+.+++......+.+|...=.    .+..+.-..+.+-+++|+..-.          +...........+.|+
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk~Ws----WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVKGWS----WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcCCcc----HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            4555555555555555555555554322    3333433444444444544311          1222334555677888


Q ss_pred             HHHHHHHHHHHhhhcchhhHHH-HhhcCchHHHHHHHHHHhh-------cchhHHHHHHHHHHHHhhhhhcccccccc--
Q 020761           92 VDVQGNFLFNKAFQFTSISSVT-LLDCCAIPCAIVFTWVFLG-------TRYSVWQLFGASLCVLGLGLMLLSDAEMA--  161 (321)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~ils~l~l~-------er~~~~~~~~~~l~~~Gv~l~~~~~~~~~--  161 (321)
                      +...+.+.|-.+.+|...+..+ +...+...+-.++-.++.+       .+-....++|++++++|+.++...+...+  
T Consensus        82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~  161 (344)
T PF06379_consen   82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKE  161 (344)
T ss_pred             HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhh
Confidence            8888888888999999888754 4445555555555445433       22234678899999999999987654321  


Q ss_pred             ---CCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 020761          162 ---GGGGSRPLLGDILVIAGAIFFAMSYVGEEF  191 (321)
Q Consensus       162 ---~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~  191 (321)
                         ...+.+...|.+.++++.++.|..+.-.+.
T Consensus       162 ~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a  194 (344)
T PF06379_consen  162 LGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA  194 (344)
T ss_pred             hccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence               112233459999999999999988776654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.12  E-value=0.056  Score=45.70  Aligned_cols=77  Identities=14%  Similarity=0.167  Sum_probs=68.3

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhc
Q 020761           78 RLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (321)
Q Consensus        78 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~  154 (321)
                      +.+.-|+...++++++..++++.|....+-++-.-+++..+--.|+++.|+++++..++.+||+|.++.+.|...=.
T Consensus       236 RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  236 RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            34556677888999999999999999999998899999999999999999999999999999999999998876543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.88  E-value=0.27  Score=44.74  Aligned_cols=69  Identities=13%  Similarity=0.134  Sum_probs=48.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhcchhhHHHH---hh-cCchHHHHHHHHHHhhcchh------HHHHHHHHHHHHhhhhhccc
Q 020761           87 LLLGFVDVQGNFLFNKAFQFTSISSVTL---LD-CCAIPCAIVFTWVFLGTRYS------VWQLFGASLCVLGLGLMLLS  156 (321)
Q Consensus        87 ~~~g~~~~~~~~~~~~al~~~~~~~~~~---i~-~~~pi~~~ils~l~l~er~~------~~~~~~~~l~~~Gv~l~~~~  156 (321)
                      .+-|++....+.++..+-+..+.+.+.+   +. ++..++..+.+. ++||+=+      ..-++++++.++|..++...
T Consensus       264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            4445555666777888777775544433   55 667788888887 5998877      45577888888888887663

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.82  E-value=0.0011  Score=56.16  Aligned_cols=77  Identities=18%  Similarity=0.214  Sum_probs=62.3

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHH----HHHHHHhhhh
Q 020761           77 QRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFG----ASLCVLGLGL  152 (321)
Q Consensus        77 ~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~----~~l~~~Gv~l  152 (321)
                      ++..++.+.-++.|+....+|+++++|-+....+++-.+.++..+...+-+.+++|||=+++++..    +++.++|..+
T Consensus       203 ~~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         203 KRFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             cchHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            333444556788999999999999999999999888889999999999999999999999998764    4444555554


Q ss_pred             h
Q 020761          153 M  153 (321)
Q Consensus       153 ~  153 (321)
                      +
T Consensus       283 l  283 (288)
T COG4975         283 L  283 (288)
T ss_pred             h
Confidence            4

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.77  E-value=0.38  Score=38.13  Aligned_cols=128  Identities=14%  Similarity=0.142  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccc--c---chhhHHHHHHHHHHHHHHHH
Q 020761           25 LLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQR--L---QVSWYWYLLLGFVDVQGNFL   99 (321)
Q Consensus        25 ~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~--~---~~~~~~~~~~g~~~~~~~~~   99 (321)
                      ++.+++.-.+.-..+-+..++.+..- +|+.-++..+..+..++..+.+.+.++  .   ++..++...-|.++...-..
T Consensus         7 ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~   85 (150)
T COG3238           7 LLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTS   85 (150)
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhh
Confidence            44444555555556666677776444 899999999999888877766543221  1   22223355555555554333


Q ss_pred             HHHhhhcchhh-HHHHhhcCchHHHHHHHHHHh----hcchhHHHHHHHHHHHHhhhhh
Q 020761          100 FNKAFQFTSIS-SVTLLDCCAIPCAIVFTWVFL----GTRYSVWQLFGASLCVLGLGLM  153 (321)
Q Consensus       100 ~~~al~~~~~~-~~~~i~~~~pi~~~ils~l~l----~er~~~~~~~~~~l~~~Gv~l~  153 (321)
                      -........++ ....+..-.-+..+++..+=+    +++++..++.|+++.++|++++
T Consensus        86 s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          86 SILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            33444444444 444556666667777666543    3899999999999999995554

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.59  E-value=0.42  Score=37.86  Aligned_cols=118  Identities=14%  Similarity=0.166  Sum_probs=74.9

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhhccCC-hhhHHHHHHHHHHHHHHHHHHhhcccccc----cccchhhHH--------
Q 020761          169 LLGDILVIAGAIFFAMSYVGEEFLVKKID-RVEVVCMIGVYGLLVSVVQLSTLELKSLE----SVKWSTDIL--------  235 (321)
Q Consensus       169 ~~G~~l~l~aa~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~--------  235 (321)
                      .+..++++++.++..+..-.+.++.+..+ |.......+..|.+++.+.....+.....    ..+|.....        
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v   83 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV   83 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence            46788899999999999999999887764 77778888888887774444443322111    123322211        


Q ss_pred             ---------HhHH-HHHHHHHHHHHHHHHHHHHHhc----ccchHHHHhHHHHHhhhhheeeccC
Q 020761          236 ---------SGAT-MLILSVLTSDMWAVILRIFCYH----QQVNWTYYLAFAAVLIGLIIYSTTA  286 (321)
Q Consensus       236 ---------~~a~-~~~~~~~~~pv~~~~~~~~~~~----e~~~~~~~~G~~li~~g~~l~~~~~  286 (321)
                               .++. ...+...-+.+.+++.+.+=++    .+++...++|.+++++|+++..+.+
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence                     2222 2222222345556666654333    5799999999999999976665443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.52  E-value=0.0074  Score=51.83  Aligned_cols=81  Identities=17%  Similarity=0.354  Sum_probs=71.3

Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhc
Q 020761           75 RRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (321)
Q Consensus        75 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~  154 (321)
                      ..+.-+++|+.+..+|+.+..++.+.-.++|.=-++-+++..++..++..++-.+++++-+++..|.|+++.+...+...
T Consensus       245 ~lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a  324 (346)
T KOG4510|consen  245 QLPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA  324 (346)
T ss_pred             ecCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence            34556777777889999999999999999999999999999999999999999999999999999999888766666555


Q ss_pred             c
Q 020761          155 L  155 (321)
Q Consensus       155 ~  155 (321)
                      .
T Consensus       325 ~  325 (346)
T KOG4510|consen  325 L  325 (346)
T ss_pred             H
Confidence            4

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.14  E-value=0.41  Score=34.78  Aligned_cols=28  Identities=7%  Similarity=0.313  Sum_probs=17.2

Q ss_pred             HHHHHHHHHHHHhcccchHHHHhHHHHH
Q 020761          248 SDMWAVILRIFCYHQQVNWTYYLAFAAV  275 (321)
Q Consensus       248 ~pv~~~~~~~~~~~e~~~~~~~~G~~li  275 (321)
                      ..+...+.+.+++||++|+.++.|+.+|
T Consensus        66 g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   66 GIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            5677888999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.95  E-value=0.19  Score=44.20  Aligned_cols=136  Identities=14%  Similarity=0.048  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcc---------cccchhhHHHHHHHH
Q 020761           21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR---------QRLQVSWYWYLLLGF   91 (321)
Q Consensus        21 ~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---------~~~~~~~~~~~~~g~   91 (321)
                      ...|+.+...--+.=..++..=.++..+.-..+..+.+.--+..++.-........         +..+.-++..++.+.
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence            34555543222122223343334444332237777777666666665554443221         224455677889999


Q ss_pred             HHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccc
Q 020761           92 VDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (321)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~  156 (321)
                      ++..++.+.++.++.-++-.-+.+..+--+++++++.+.++.++++.||.|+.+.+.|+.+=.+.
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL  314 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence            99999988888887766666677788889999999999999999999999999999998876653

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=94.60  E-value=0.12  Score=44.91  Aligned_cols=54  Identities=6%  Similarity=0.234  Sum_probs=47.5

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCC
Q 020761          236 SGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDL  289 (321)
Q Consensus       236 ~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  289 (321)
                      .++....+...+..+++.++++++++.+++..||.+..+.+.|+.+........
T Consensus        41 ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   41 LDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             CCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            556677777778999999999999999999999999999999999988776654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=93.28  E-value=1.3  Score=40.41  Aligned_cols=137  Identities=20%  Similarity=0.189  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHh-cC--CChhHHHHHHHHHHHHHHHHHHhh----hcccc----cchhhHHHHHH
Q 020761           21 TLYLLLLGQLVSFSLALSSFTTAVITD-LG--VDAPITQSVLCYLSLALAYGGILL----YRRQR----LQVSWYWYLLL   89 (321)
Q Consensus        21 ~~~~~~~~~~~a~~~~~~~~~~~~l~~-~~--~~~p~~~~~~r~~~~~l~l~~~~~----~~~~~----~~~~~~~~~~~   89 (321)
                      ...|-+++++.|++-..-.+..++-.. +|  .+-+..+. +--++..++++|..+    ..+++    ...+....++.
T Consensus       245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffG-fvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFG-FVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHH-HHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            356777776666665555555555443 32  32333333 223344444444332    22221    12233344566


Q ss_pred             HHHHHHH-HHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccc
Q 020761           90 GFVDVQG-NFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (321)
Q Consensus        90 g~~~~~~-~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~  158 (321)
                      +.++... .+++..|.-.+++-.+++-.+++.+..++.-.++-+.++++..++|.+..++|-+++...+.
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            7776665 99999999999999999999999999999999988999999999999999999999988554

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=93.26  E-value=1.7  Score=37.83  Aligned_cols=164  Identities=13%  Similarity=0.124  Sum_probs=98.1

Q ss_pred             HHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcccccchhhHHHHHHHHHHHHHHHHHHHhhhcch
Q 020761           29 QLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRRQRLQVSWYWYLLLGFVDVQGNFLFNKAFQFTS  108 (321)
Q Consensus        29 ~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~  108 (321)
                      .++|.+..|+++.-.|-...+  +++..-++......+.-+.....+  ..++-+.+.++-|.+...+|.+-...++...
T Consensus         5 ~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~--~~p~f~p~amlgG~lW~~gN~~~vpii~~iG   80 (254)
T PF07857_consen    5 CIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLIL--GFPPFYPWAMLGGALWATGNILVVPIIKTIG   80 (254)
T ss_pred             HHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhc--CCCcceeHHHhhhhhhhcCceeehhHhhhhh
Confidence            356666777765555443322  455544444332222222222222  2222333456677888888999999999999


Q ss_pred             hhHHHHhhcCchH-HHHHHHHH-Hhhc---c--hhHHHHHHHHHHHHhhhhhccccccc---------------------
Q 020761          109 ISSVTLLDCCAIP-CAIVFTWV-FLGT---R--YSVWQLFGASLCVLGLGLMLLSDAEM---------------------  160 (321)
Q Consensus       109 ~~~~~~i~~~~pi-~~~ils~l-~l~e---r--~~~~~~~~~~l~~~Gv~l~~~~~~~~---------------------  160 (321)
                      .+....+-++.-. .--..+++ ++++   .  -.+..++|++++++|..+...-+...                     
T Consensus        81 Lglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~~~~~~~  160 (254)
T PF07857_consen   81 LGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIEDVIEIE  160 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCccccccccccccccccccc
Confidence            9999988766433 33333333 3332   2  23557889999999988776533210                     


Q ss_pred             cC---C-CC---------CcchhhhHHHHHHHHHHHHHHHHHHHhhccC
Q 020761          161 AG---G-GG---------SRPLLGDILVIAGAIFFAMSYVGEEFLVKKI  196 (321)
Q Consensus       161 ~~---~-~~---------~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~  196 (321)
                      +.   + +.         .++..|..+++.+.++|+...+=.+++.++.
T Consensus       161 ~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  161 DDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             cccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence            00   0 00         1367899999999999999887777776654

The region concerned is approximately 280 residues long.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.05  E-value=0.021  Score=50.45  Aligned_cols=113  Identities=19%  Similarity=0.252  Sum_probs=73.4

Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHHhhccCCh---------h----hHHHHHHHHHHHHHHHHHHhhcccccccccchh
Q 020761          166 SRPLLGDILVIAGAIFFAMSYVGEEFLVKKIDR---------V----EVVCMIGVYGLLVSVVQLSTLELKSLESVKWST  232 (321)
Q Consensus       166 ~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~---------~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  232 (321)
                      .+...|.++++.+.++.+...++.||..++...         .    +.++|...+...+.       |-.++..     
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~G~ltm~vG-------ei~NFaA-----   84 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWAGMLTMIVG-------EIANFAA-----   84 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHHHHHHHHHH-------hHhhHHH-----
Confidence            456789999999999999999999987665422         1    22333322222211       1111110     


Q ss_pred             hHHHhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCCCCC
Q 020761          233 DILSGATMLILSVLTSDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAKDLL  290 (321)
Q Consensus       233 ~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  290 (321)
                      .....++...-...++.+.+.+++..+++|++++...+|+.+.++|..+......++.
T Consensus        85 YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   85 YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            0002223333334457888999999999999999999999999999877766555443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.50  E-value=0.35  Score=36.40  Aligned_cols=35  Identities=11%  Similarity=0.251  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHHhcccchHHHHhHHHHHhhhhhee
Q 020761          248 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIY  282 (321)
Q Consensus       248 ~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  282 (321)
                      .-+++++.++++.+|..+...++|+.+++.|+.+.
T Consensus        78 ~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   78 AFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            67789999999989999999999999999998763

Many members are annotated as potential transmembrane proteins.

>PRK02237 hypothetical protein; Provisional

Probab=90.57  E-value=4.8  Score=29.83  Aligned_cols=50  Identities=20%  Similarity=0.620  Sum_probs=40.6

Q ss_pred             chhhHH-HHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccc
Q 020761          107 TSISSV-TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (321)
Q Consensus       107 ~~~~~~-~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~  156 (321)
                      .+.+.+ +.-.....+...+..+.+-|+|++...++|..++++|+.++.+.
T Consensus        56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~  106 (109)
T PRK02237         56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA  106 (109)
T ss_pred             hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence            334443 44456677888899999999999999999999999999998764

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=89.07  E-value=3.9  Score=30.21  Aligned_cols=54  Identities=22%  Similarity=0.594  Sum_probs=43.7

Q ss_pred             hhcchhhHH-HHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761          104 FQFTSISSV-TLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus       104 l~~~~~~~~-~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      +|-.+.+.+ +.-.....+...+..+.+-|+|++...++|..++++|+.++.+..
T Consensus        51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            444444443 445567888899999999999999999999999999999998743

; GO: 0016020 membrane

>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human

Probab=88.75  E-value=16  Score=32.16  Aligned_cols=115  Identities=15%  Similarity=0.084  Sum_probs=62.8

Q ss_pred             cchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccccc-c--cCCCCCcchhhhHHHHHHHHHH
Q 020761          106 FTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDAE-M--AGGGGSRPLLGDILVIAGAIFF  182 (321)
Q Consensus       106 ~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~~-~--~~~~~~~~~~G~~l~l~aa~~~  182 (321)
                      |-.....+++......+++++.+-.-.-|.|.+---.+..+..|+.+....+.. +  .....+...+|+.+.+.....-
T Consensus       143 ~pGIv~qAvl~T~~vf~~ml~lYk~g~IrvT~kf~~iv~~a~~gi~~~~Lv~~vl~lf~~~l~~~gplgI~~slv~v~iA  222 (274)
T PF12811_consen  143 YPGIVFQAVLGTFGVFAVMLALYKTGIIRVTPKFRRIVMIATFGIALFYLVNLVLSLFVGSLRDGGPLGIGFSLVVVGIA  222 (274)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhCCeeechHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHH
Confidence            344445556666667777777766555565554444444444454443332211 0  0012233457777777766666


Q ss_pred             HHHHHHHHHhhccC---ChhhHHHHHHHHHHHHHHHHHHhhc
Q 020761          183 AMSYVGEEFLVKKI---DRVEVVCMIGVYGLLVSVVQLSTLE  221 (321)
Q Consensus       183 a~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~  221 (321)
                      ++..++.=...++.   ...+...|...+|..+. +.++..|
T Consensus       223 a~sLllDFd~Ie~~v~~gaPk~~eW~~AfGL~vT-LVWLYlE  263 (274)
T PF12811_consen  223 ALSLLLDFDFIEQGVRQGAPKKMEWYAAFGLLVT-LVWLYLE  263 (274)
T ss_pred             HHHHHhhHHHHHHHHHcCCChhhHHHHHHHHHHH-HHHHHHH
Confidence            66655544333332   45567778888888888 6665544

Some members of BI1 family have been proved to play important roles in cell death [, ].

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.56  E-value=3.5  Score=30.34  Aligned_cols=70  Identities=20%  Similarity=0.245  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcchhhHHHHhh-cCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhc
Q 020761           85 WYLLLGFVDVQGNFLFNKAFQFTSISSVTLLD-CCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLML  154 (321)
Q Consensus        85 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~  154 (321)
                      .|.+.-.++--+..+||.-++..+.+.+..+. ++.-.|+.+++..+--|-...+-++|..+.+.|+.++.
T Consensus        54 ~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   54 EYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            35555555666688999999999999988775 55778899999875434444556778888888887764

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=86.73  E-value=1.1  Score=33.11  Aligned_cols=40  Identities=10%  Similarity=0.068  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccCC
Q 020761          248 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTAK  287 (321)
Q Consensus       248 ~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  287 (321)
                      -.+.++++++.+-+++|+...++|..++++|+.+..+.++
T Consensus        67 fI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   67 FIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            5677999999999999999999999999999988776543

; GO: 0016020 membrane

>PRK02237 hypothetical protein; Provisional

Probab=86.12  E-value=1.2  Score=32.87  Aligned_cols=39  Identities=8%  Similarity=0.022  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccC
Q 020761          248 SDMWAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  286 (321)
Q Consensus       248 ~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  286 (321)
                      -.+.++++.+.+-+++|+...++|..++++|+.+....+
T Consensus        69 yI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         69 YVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            567799999999999999999999999999987765544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=85.94  E-value=0.78  Score=39.93  Aligned_cols=137  Identities=14%  Similarity=0.127  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHhhhcc--------ccc--chhhHHHHHHH
Q 020761           21 TLYLLLLGQLVSFSLALSSFTTAVITDLGVDAPITQSVLCYLSLALAYGGILLYRR--------QRL--QVSWYWYLLLG   90 (321)
Q Consensus        21 ~~~~~~~~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--------~~~--~~~~~~~~~~g   90 (321)
                      .+.|.++|++.++....-+.-.++...+--+.-.-++++.-..+.++++|......        ++.  ..-|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            37889999888887777776666554433335567888888888888888776331        122  11233333445


Q ss_pred             HHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761           91 FVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus        91 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      ++|+..++...+=++.+++-+..+=.......=.+++..+++|--+...|-+-++.+.|-..-++.+
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence            5555556555556667777665555555566667888899999999888888888887777665543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=85.04  E-value=6.7  Score=33.26  Aligned_cols=106  Identities=12%  Similarity=0.067  Sum_probs=78.4

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHhhhc--ccc------cch-hhHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCc
Q 020761           49 GVDAPITQSVLCYLSLALAYGGILLYR--RQR------LQV-SWYWYLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCA  119 (321)
Q Consensus        49 ~~~~p~~~~~~r~~~~~l~l~~~~~~~--~~~------~~~-~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~  119 (321)
                      ++ .-+.-.++.-+++..+++.+.+..  +.+      .+. ...+..+.|.+.++..++--+.+.-++....+++..+.
T Consensus       182 Nf-~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALN  260 (309)
T COG5070         182 NF-KDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALN  260 (309)
T ss_pred             cc-chhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhh
Confidence            45 556677788888877776654422  211      122 23456677777777788888899999999999999999


Q ss_pred             hHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcc
Q 020761          120 IPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLL  155 (321)
Q Consensus       120 pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~  155 (321)
                      -.-..+-+.++++|+.+...+.++.+++...++-..
T Consensus       261 Klp~alaGlvffdap~nf~si~sillGflsg~iYav  296 (309)
T COG5070         261 KLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV  296 (309)
T ss_pred             hChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence            888899999999999999999998888665555444

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=80.57  E-value=18  Score=31.70  Aligned_cols=73  Identities=12%  Similarity=0.234  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcchhhHHHHhhcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccccc
Q 020761           86 YLLLGFVDVQGNFLFNKAFQFTSISSVTLLDCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSDA  158 (321)
Q Consensus        86 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~~  158 (321)
                      .++.+..+..+..+...=++.-.+..+..+...--..|.++|++++.++++.....+..+.+.|+.+-.+++.
T Consensus       263 ~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  263 AFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             HHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence            3444555555543333444556677788888888999999999999999999999999999999999998764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	321
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.58
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.49
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.41
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.97

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.58  E-value=5.4e-07  Score=67.12  Aligned_cols=69  Identities=14%  Similarity=0.287  Sum_probs=60.7

Q ss_pred             HHHHHH-HHHHHHHHHhhhcchhhHHHHh-hcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhccc
Q 020761           88 LLGFVD-VQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLS  156 (321)
Q Consensus        88 ~~g~~~-~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~  156 (321)
                      +.+.+. .....++..++++.|.+.+..+ ..+.|+++.+++++++||++++.+++|+.+.++|++++...
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344444 4448888999999999999888 79999999999999999999999999999999999998763

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.49  E-value=2e-07  Score=72.03  Aligned_cols=70  Identities=14%  Similarity=0.285  Sum_probs=50.3

Q ss_pred             HHHHHH-HHHHHHHHHhhhcchhhHHHHh-hcCchHHHHHHHHHHhhcchhHHHHHHHHHHHHhhhhhcccc
Q 020761           88 LLGFVD-VQGNFLFNKAFQFTSISSVTLL-DCCAIPCAIVFTWVFLGTRYSVWQLFGASLCVLGLGLMLLSD  157 (321)
Q Consensus        88 ~~g~~~-~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~ils~l~l~er~~~~~~~~~~l~~~Gv~l~~~~~  157 (321)
                      +.+++. ..+++++.+++++.|++.+..+ .++.|++++++++++++|++++.+++|+++.++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344444 4448899999999999999888 899999999999999999999999999999999999987644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.41  E-value=8.1e-07  Score=68.58  Aligned_cols=101  Identities=9%  Similarity=-0.008  Sum_probs=51.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHhHHHHHHH-HHHHHH
Q 020761          172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILS-VLTSDM  250 (321)
Q Consensus       172 ~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pv  250 (321)
                      .++.++++++.+..++..|+..+....     +....+.+...+.+..+... ...        .+...+... ..+.|+
T Consensus         4 ~l~Ll~ail~ev~~~~~lK~s~g~~~~-----~~~~l~i~~~~ls~~l~~~a-lk~--------i~~s~ay~iw~~l~pv   69 (137)
T 2i68_A            4 YIYLGGAILAEVIGTTLMKFSEGFTRL-----WPSVGTIICYCASFWLLAQT-LAY--------IPTGIAYAIWSGVGIV   69 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHC-----------------CHHHHHHHHHHHHHHHH-HC-------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccchH-----HHHHHHHHHHHHHHHHHHHH-HHh--------CChhHHHHHHHHHHHH
Confidence            456778888899999988875321111     11112222221222222110 111        111112222 345999


Q ss_pred             HHHHHHHHHhcccchHHHHhHHHHHhhhhheeeccC
Q 020761          251 WAVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  286 (321)
Q Consensus       251 ~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  286 (321)
                      +++++++++++|++++.+++|+++|+.|+++.+..+
T Consensus        70 ~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999988654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.97  E-value=0.00015  Score=53.75  Aligned_cols=102  Identities=11%  Similarity=0.062  Sum_probs=62.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHhHHHHHHHHHHHHHH
Q 020761          172 DILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVYGLLVSVVQLSTLELKSLESVKWSTDILSGATMLILSVLTSDMW  251 (321)
Q Consensus       172 ~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~  251 (321)
                      .++.++++++.+..+...|+..+ ...   . +-...+.+...+.+..+.. .....+-+   ...+..    .-+.|++
T Consensus         4 ~l~l~~a~~~e~~~~~~lK~s~~-~~~---~-~~~~~~~~~~~~~~~~~~~-al~~~p~s---~ay~i~----~g~~~v~   70 (110)
T 3b5d_A            4 YIYLGGAILAEVIGTTLMKFSEG-FTR---L-WPSVGTIICYCASFWLLAQ-TLAYIPTG---IAYAIW----SGVGIVL   70 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccC-cch---H-HHHHHHHHHHHHHHHHHHH-HHHhCChh---hHHHHH----hhHHHHH
Confidence            45677888999999999988532 111   1 1112222222122222211 11110111   011111    2348999


Q ss_pred             HHHHHHHHhcccchHHHHhHHHHHhhhhheeeccC
Q 020761          252 AVILRIFCYHQQVNWTYYLAFAAVLIGLIIYSTTA  286 (321)
Q Consensus       252 ~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  286 (321)
                      +.+.+++++||++++.+++|+.+|+.|+++.+..+
T Consensus        71 ~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           71 ISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	321
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	83.13

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=83.13  E-value=11  Score=31.07  Aligned_cols=38  Identities=13%  Similarity=-0.074  Sum_probs=20.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhccCChhhHHHHHHHH
Q 020761          170 LGDILVIAGAIFFAMSYVGEEFLVKKIDRVEVVCMIGVY  208 (321)
Q Consensus       170 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~  208 (321)
                      .|.+... ..+.+++.....-++.++.+.........+.
T Consensus        61 ~g~~~s~-~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~   98 (447)
T d1pw4a_          61 LGFALSG-ISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL   98 (447)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence            4544433 3445566666667777777665544443333