Citrus Sinensis ID: 020767

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
METKGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDENAAATFLLQPAES
cccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHcccHHHHHHHcccccHHHHHHcccccccccEEEcccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccc
cccccccEEEEEEEEEccccHHHHcccHHHHHHHHHHHHHHccccHHHEEEEEccccccccccHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccEEEEEcccEEEcHHHHHHHHcccccccEEEEEEEcccccccccccEEEccccccccccccccHHHcccccccHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHccccHHHHHHHHccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccccccEEEccccc
metkgskrIAVLVgcnypntknelhgCINDVLAMRDVIInrfgfdpnhielltdapgssvmptgANIKAALDRMVSKAEAGDVLLFhysghgtripslrpiwpfrqqdeaivpcdfnlitdldfrqlvnrlpkgasftvfsdschsgglidkakeqigpssnidqlrtkqspafrpktipfQSILEHLSSVTKINTSDIGTHLLEFfgvdaslrfrlapneVMDLFeswslkpddgillsgcqanetsadmspmesggkayGAFSNAVQRVLKensgplsnKEVVLMARKILKEqrfeqhpclycsdenAAATFLLQPAES
metkgskriavlvgcnypntkneLHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKensgplsnkeVVLMARKILKEQRFEQHPCLYCSDENAAATFLLQPAES
METKGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDENAAATFLLQPAES
********IAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLI***************************TIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGC****************************************EVVLMARKILKEQRFEQHPCLYCSDENAAATFL******
*****SK**AVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIG*SSNI*QLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVL*****************YCSDENAAATFLLQP***
METKGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGCQANE**********GGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDENAAATFLLQPAES
*****SKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNID****KQS**FRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASL******NEVMDLFESWSLKPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDENAAATFLLQ****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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METKGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDENAAATFLLQPAES
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query321 2.2.26 [Sep-21-2011]
Q9FYE1325 Metacaspase-9 OS=Arabidop yes no 0.981 0.969 0.643 1e-119
O64519368 Metacaspase-6 OS=Arabidop no no 0.953 0.831 0.388 1e-64
O64518410 Metacaspase-5 OS=Arabidop no no 0.953 0.746 0.362 8e-59
Q9SA41381 Metacaspase-8 OS=Arabidop no no 0.950 0.800 0.348 1e-51
O64517 418 Metacaspase-4 OS=Arabidop no no 0.473 0.363 0.559 3e-44
Q6XPT5403 Metacaspase-7 OS=Arabidop no no 0.660 0.526 0.434 9e-41
O74477425 Metacaspase-1 OS=Schizosa yes no 0.844 0.637 0.333 5e-29
Q6C2Y6461 Metacaspase-1 OS=Yarrowia yes no 0.859 0.598 0.311 2e-23
Q6BH13440 Metacaspase-1 OS=Debaryom yes no 0.853 0.622 0.299 2e-23
A3LSY7403 Metacaspase-1 OS=Scheffer no no 0.866 0.689 0.296 1e-22
>sp|Q9FYE1|MCA9_ARATH Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1 SV=1 Back     alignment and function desciption
 Score =  428 bits (1101), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/328 (64%), Positives = 255/328 (77%), Gaps = 13/328 (3%)

Query: 1   METKG--SKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGS 58
           M+ +G   KR+AVLVGCNYPNT+NELHGCINDVLAM++ I++RFGF  + IE+LTD P S
Sbjct: 1   MDQQGMVKKRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPES 60

Query: 59  SVMPTGANIKAALDRMVSKAEA--GDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDF 116
            V PTGANIKAAL RMV KA+A  GD+L FHYSGHGTRIPS++   PF+ QDEAIVPCDF
Sbjct: 61  KVKPTGANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFK-QDEAIVPCDF 119

Query: 117 NLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGP---SSNIDQLRTKQSPA 173
           NLITD+DFR+LVN+LPKG SFT+ SDSCHSGGLIDK KEQIGP   SSNI       +  
Sbjct: 120 NLITDVDFRELVNQLPKGTSFTMISDSCHSGGLIDKEKEQIGPSSVSSNISPAIETTNKT 179

Query: 174 FRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKP 233
              + +PF+++L+HLSS+T I TSDIGTHLLE FG DA L+FRL   ++MDL E+ + + 
Sbjct: 180 ITSRALPFKAVLDHLSSLTGITTSDIGTHLLELFGRDAGLKFRLPAMDLMDLLETMTARE 239

Query: 234 ---DDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARK 290
              D GIL+SGCQA+ETSAD+      GKAYGAFSNA+QRVL EN G + NK++V+MAR 
Sbjct: 240 KHVDSGILMSGCQADETSADVGV--GNGKAYGAFSNAIQRVLNENEGAMKNKQLVMMARD 297

Query: 291 ILKEQRFEQHPCLYCSDENAAATFLLQP 318
           +L+   F QHPCLYCSD+NA ATFL QP
Sbjct: 298 VLERLGFHQHPCLYCSDQNADATFLSQP 325
Cysteine protease that cleaves specifically after arginine or lysine residues. Does not cleave caspase-specific substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|O64519|MCA6_ARATH Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1 SV=1 Back     alignment and function description
>sp|O64518|MCA5_ARATH Metacaspase-5 OS=Arabidopsis thaliana GN=AMC5 PE=1 SV=1 Back     alignment and function description
>sp|Q9SA41|MCA8_ARATH Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1 SV=1 Back     alignment and function description
>sp|O64517|MCA4_ARATH Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1 SV=1 Back     alignment and function description
>sp|Q6XPT5|MCA7_ARATH Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1 SV=1 Back     alignment and function description
>sp|O74477|MCA1_SCHPO Metacaspase-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pca1 PE=2 SV=1 Back     alignment and function description
>sp|Q6C2Y6|MCA1_YARLI Metacaspase-1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=MCA1 PE=3 SV=1 Back     alignment and function description
>sp|Q6BH13|MCA1_DEBHA Metacaspase-1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MCA1 PE=3 SV=2 Back     alignment and function description
>sp|A3LSY7|MCA1_PICST Metacaspase-1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=MCA1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
224137528315 predicted protein [Populus trichocarpa] 0.962 0.980 0.736 1e-131
224086693315 predicted protein [Populus trichocarpa] 0.962 0.980 0.730 1e-129
255552818325 caspase, putative [Ricinus communis] gi| 0.968 0.956 0.741 1e-129
297741720326 unnamed protein product [Vitis vinifera] 0.962 0.947 0.717 1e-128
225440222316 PREDICTED: metacaspase-9 [Vitis vinifera 0.962 0.977 0.717 1e-128
87162873319 Peptidase C14, caspase catalytic subunit 0.981 0.987 0.712 1e-123
388522461319 unknown [Medicago truncatula] 0.981 0.987 0.708 1e-122
356571837322 PREDICTED: metacaspase-9-like [Glycine m 0.965 0.962 0.689 1e-119
449453109317 PREDICTED: metacaspase-9-like [Cucumis s 0.962 0.974 0.681 1e-118
449525634316 PREDICTED: LOW QUALITY PROTEIN: metacasp 0.962 0.977 0.677 1e-118
>gi|224137528|ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|222867210|gb|EEF04341.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 232/315 (73%), Positives = 267/315 (84%), Gaps = 6/315 (1%)

Query: 5   GSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTG 64
           G KR+AVLVGCNYPNT+NELHGCINDVLAM++V++ RFGFD +H++LLTDAPGS V+PTG
Sbjct: 4   GKKRMAVLVGCNYPNTQNELHGCINDVLAMKEVLVKRFGFDASHVQLLTDAPGSVVLPTG 63

Query: 65  ANIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDF 124
           ANIK AL  M+ +AEAGDVL FHYSGHGT IPS +P   FR QDEAIVPCDFNLITD+DF
Sbjct: 64  ANIKRALGHMIDQAEAGDVLFFHYSGHGTWIPSNKPGHAFR-QDEAIVPCDFNLITDVDF 122

Query: 125 RQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSI 184
           RQLVNRLPKGAS T+ SDSCHSGGLIDK KEQIGP++ I    T    +  PK IPF+SI
Sbjct: 123 RQLVNRLPKGASLTILSDSCHSGGLIDKEKEQIGPNATITANNTAVH-SHNPKAIPFESI 181

Query: 185 LEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGCQA 244
           L+HL+S+T INTSD+GTHLLEFFG DASL++RL P E  DLF+  SLKPD+GILLSGCQA
Sbjct: 182 LQHLTSLTNINTSDVGTHLLEFFGSDASLKYRLPPLE-WDLFD--SLKPDEGILLSGCQA 238

Query: 245 NETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFE-QHPCL 303
           NETSADMSP E GGKAYGAFSNAVQ VLK++SG LSNK++V MAR++L+ Q FE QHPCL
Sbjct: 239 NETSADMSPYEGGGKAYGAFSNAVQMVLKQHSGQLSNKQLVTMAREVLQAQGFEQQHPCL 298

Query: 304 YCSDENAAATFLLQP 318
           YCSD+NA ATFL QP
Sbjct: 299 YCSDQNAIATFLWQP 313

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224086693|ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|222853910|gb|EEE91457.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255552818|ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|223543463|gb|EEF44994.1| caspase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297741720|emb|CBI32852.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225440222|ref|XP_002283757.1| PREDICTED: metacaspase-9 [Vitis vinifera] Back     alignment and taxonomy information
>gi|87162873|gb|ABD28668.1| Peptidase C14, caspase catalytic subunit p20 [Medicago truncatula] Back     alignment and taxonomy information
>gi|388522461|gb|AFK49292.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356571837|ref|XP_003554078.1| PREDICTED: metacaspase-9-like [Glycine max] Back     alignment and taxonomy information
>gi|449453109|ref|XP_004144301.1| PREDICTED: metacaspase-9-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449525634|ref|XP_004169821.1| PREDICTED: LOW QUALITY PROTEIN: metacaspase-9-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
TAIR|locus:2146648325 MC9 "metacaspase 9" [Arabidops 0.981 0.969 0.643 2.4e-108
TAIR|locus:2207430410 MC5 "metacaspase 5" [Arabidops 0.473 0.370 0.559 2.8e-67
TAIR|locus:2207350 418 MC4 "metacaspase 4" [Arabidops 0.473 0.363 0.559 1.3e-63
TAIR|locus:2207450403 MC7 "metacaspase 7" [Arabidops 0.669 0.533 0.435 3.8e-60
TAIR|locus:2032905381 MC8 "metacaspase 8" [Arabidops 0.523 0.440 0.450 6.1e-54
TAIR|locus:2207440368 MC6 "metacaspase 6" [Arabidops 0.666 0.581 0.427 3.6e-41
POMBASE|SPCC1840.04425 pca1 "metacaspase Pca1" [Schiz 0.866 0.654 0.337 2.1e-29
TAIR|locus:2204798367 MC1 "metacaspase 1" [Arabidops 0.451 0.395 0.388 5.4e-25
CGD|CAL0003470448 MCA1 [Candida albicans (taxid: 0.872 0.625 0.302 2e-23
UNIPROTKB|Q5ANA8448 MCA1 "Metacaspase-1" [Candida 0.872 0.625 0.302 2e-23
TAIR|locus:2146648 MC9 "metacaspase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
 Identities = 211/328 (64%), Positives = 255/328 (77%)

Query:     1 METKG--SKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGS 58
             M+ +G   KR+AVLVGCNYPNT+NELHGCINDVLAM++ I++RFGF  + IE+LTD P S
Sbjct:     1 MDQQGMVKKRLAVLVGCNYPNTRNELHGCINDVLAMKETILSRFGFKQDDIEVLTDEPES 60

Query:    59 SVMPTGANIKAALDRMVSKAEAG--DVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDF 116
              V PTGANIKAAL RMV KA+AG  D+L FHYSGHGTRIPS++   PF+Q DEAIVPCDF
Sbjct:    61 KVKPTGANIKAALRRMVDKAQAGSGDILFFHYSGHGTRIPSVKSAHPFKQ-DEAIVPCDF 119

Query:   117 NLITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSS---NIDQLRTKQSPA 173
             NLITD+DFR+LVN+LPKG SFT+ SDSCHSGGLIDK KEQIGPSS   NI       +  
Sbjct:   120 NLITDVDFRELVNQLPKGTSFTMISDSCHSGGLIDKEKEQIGPSSVSSNISPAIETTNKT 179

Query:   174 FRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKP 233
                + +PF+++L+HLSS+T I TSDIGTHLLE FG DA L+FRL   ++MDL E+ + + 
Sbjct:   180 ITSRALPFKAVLDHLSSLTGITTSDIGTHLLELFGRDAGLKFRLPAMDLMDLLETMTARE 239

Query:   234 ---DDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARK 290
                D GIL+SGCQA+ETSAD+      GKAYGAFSNA+QRVL EN G + NK++V+MAR 
Sbjct:   240 KHVDSGILMSGCQADETSADVGV--GNGKAYGAFSNAIQRVLNENEGAMKNKQLVMMARD 297

Query:   291 ILKEQRFEQHPCLYCSDENAAATFLLQP 318
             +L+   F QHPCLYCSD+NA ATFL QP
Sbjct:   298 VLERLGFHQHPCLYCSDQNADATFLSQP 325
GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0008234 "cysteine-type peptidase activity" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
TAIR|locus:2207430 MC5 "metacaspase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207350 MC4 "metacaspase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207450 MC7 "metacaspase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032905 MC8 "metacaspase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207440 MC6 "metacaspase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPCC1840.04 pca1 "metacaspase Pca1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TAIR|locus:2204798 MC1 "metacaspase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0003470 MCA1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ANA8 MCA1 "Metacaspase-1" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FYE1MCA9_ARATH3, ., 4, ., 2, 2, ., -0.64320.98130.9692yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0101007801
hypothetical protein (315 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
pfam00656228 pfam00656, Peptidase_C14, Caspase domain 5e-38
>gnl|CDD|216047 pfam00656, Peptidase_C14, Caspase domain Back     alignment and domain information 
 Score =  134 bits (339), Expect = 5e-38
 Identities = 59/306 (19%), Positives = 94/306 (30%), Gaps = 91/306 (29%)

Query: 8   RIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANI 67
            +A+++G NY      L GC ND  A+  ++  R GF+   +E+  D        T   I
Sbjct: 1   GLALIIGNNYFGHAAPLRGCDNDAEALAKLL-QRLGFE---VEVFDD-------LTAEEI 49

Query: 68  KAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQL 127
           + AL    ++A+ GD  +  YSGHG +             D  +VP D     D  F  L
Sbjct: 50  RRALREFAARADPGDSFVVVYSGHGVQGEVYG-------GDGYLVPVDA---LDDVFNGL 99

Query: 128 VNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEH 187
                KG       D+C  G L D  K   G S   + +   ++        P       
Sbjct: 100 NCPSLKGKPKLFIIDACRGGPLDDGVKSDSGSSGESESVDDSEAAGLSKIPAP------- 152

Query: 188 LSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSGCQANET 247
                                                          D ++       + 
Sbjct: 153 ----------------------------------------------ADFLVAYSTTPGQV 166

Query: 248 SADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRF------EQHP 301
           S        G  +   F  A+ +VL+E +  L      L+       ++       +Q P
Sbjct: 167 SYR------GTGSGSWFIQALCQVLREYAPGLD-----LLDILTRVNRKVADATGKKQMP 215

Query: 302 CLYCSD 307
           C+  S 
Sbjct: 216 CISSST 221

Length = 228

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 321
KOG1546362 consensus Metacaspase involved in regulation of ap 100.0
PF00656248 Peptidase_C14: Caspase domain; InterPro: IPR011600 100.0
cd00032243 CASc Caspase, interleukin-1 beta converting enzyme 99.83
smart00115241 CASc Caspase, interleukin-1 beta converting enzyme 99.81
PF01650256 Peptidase_C13: Peptidase C13 family; InterPro: IPR 99.64
COG4249380 Uncharacterized protein containing caspase domain 99.61
PF14538154 Raptor_N: Raptor N-terminal CASPase like domain 98.48
KOG1348477 consensus Asparaginyl peptidases [Posttranslationa 98.46
KOG1349309 consensus Gpi-anchor transamidase [Posttranslation 98.46
COG5206382 GPI8 Glycosylphosphatidylinositol transamidase (GP 98.21
COG4249 380 Uncharacterized protein containing caspase domain 97.8
KOG1517 1387 consensus Guanine nucleotide binding protein MIP1 97.07
PF12770287 CHAT: CHAT domain 97.04
COG0648280 Nfo Endonuclease IV [DNA replication, recombinatio 84.43
COG4995420 Uncharacterized protein conserved in bacteria [Fun 81.91
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=9.5e-54  Score=385.19  Aligned_cols=294  Identities=48%  Similarity=0.729  Sum_probs=253.9

Q ss_pred             CCCcEEEEEEeecCCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCC-CCCcHHHHHHHHHHHHHhCCCCC
Q 020767            4 KGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSS-VMPTGANIKAALDRMVSKAEAGD   82 (321)
Q Consensus         4 ~~~~~~Al~IGi~y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~-~~~T~~~I~~~l~~l~~~~~~~D   82 (321)
                      ..++|+||||||||.++...|+||+|||..|+++|.++|||+.++|.+|+|.+.+. ..||++||++||+||++.+++||
T Consensus        60 ~~gkrrAvLiGINY~gTk~ELrGCINDv~~M~~~Lv~rfGFs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~~aq~gD  139 (362)
T KOG1546|consen   60 MAGKRRAVLIGINYPGTKNELRGCINDVHRMRKLLVERFGFSEDDILMLTDTDESPVRIPTGKNIRRALRWLVESAQPGD  139 (362)
T ss_pred             ccccceEEEEeecCCCcHHHHhhhHHHHHHHHHHHHHhhCCChhheEEEecCCCcccccCcHHHHHHHHHHHHhcCCCCC
Confidence            35688899999999999999999999999999999999999999999999998655 88999999999999999999999


Q ss_pred             EEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCC----CCcHHHHHHHHHhCCCCCeEEEEEeCCCCCccccccccccC
Q 020767           83 VLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFN----LITDLDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIG  158 (321)
Q Consensus        83 ~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~----~i~~~~l~~ll~~l~~~~~v~~ilD~C~SG~~~~~~~~~~~  158 (321)
                      .+||||||||.+.++. +|++.+|+|++|+|.|.+    .|.++.++.+++++++|+++++|+|+||||++++.++... 
T Consensus       140 ~LvfHYSGHGtr~~~~-~gDe~dG~DE~I~P~D~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGgliDlp~i~~-  217 (362)
T KOG1546|consen  140 SLVFHYSGHGTRQPDT-NGDEVDGYDETIVPCDHNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGGLIDLPEIER-  217 (362)
T ss_pred             EEEEEecCCCCcCCCC-CCCCCCCCcceeecccccccccccchHHHHHHHhccCCCceEEEEeecccCCCcccchhhee-
Confidence            9999999999999996 888999999999999998    6888889999999999999999999999999999764321 


Q ss_pred             CCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCC---CcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCC
Q 020767          159 PSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINT---SDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDD  235 (321)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~  235 (321)
                               +  ..-.+.|++|++..++.++..+|.+.   ..+...+.+.||.++++.....   ...+.........+
T Consensus       218 ---------~--~~~ir~~~l~~e~~~d~l~~~tG~~~ge~~~i~~~l~d~f~~dts~~~~~~---~~~~~~~~~~~~d~  283 (362)
T KOG1546|consen  218 ---------T--KGVIRNRNLPWEDHRDLLKAQTGTDGGEVGKIRGCLDDIFGEDTSPLPNGT---IGDLGRQLKDSHDN  283 (362)
T ss_pred             ---------c--ccccccCccchHHhHHHHHhhcCCCCceeeeeecchhhhhcccCCCCCCcc---hhhhhhhcccCCCC
Confidence                     1  11246789999998888888887444   3567888889998886522111   01112222456799


Q ss_pred             eEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCcccccccCccccCccc
Q 020767          236 GILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDENAAATFL  315 (321)
Q Consensus       236 ~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~~~~Q~P~l~~~~~~~~~~f~  315 (321)
                      .|+||.|+++|+|.+...   .+...|+|++|+.++|.++++.++.++|+-+++..++..++.|.|+||++++..+..|+
T Consensus       284 ~illSgcqadqtSad~~~---~G~~~gAms~Aiq~i~~~n~g~~~~~~lvl~~~~~~~~~g~sQ~P~L~csd~~~~~~~~  360 (362)
T KOG1546|consen  284 GILLSGCQADQTSADAST---YGHLYGAMSNAIQEILTENKGRITNKLLVLRARGALKKQGFSQEPGLYCSDPFDVAPFI  360 (362)
T ss_pred             ceEEeccccccccccccc---CCcchhHHHHHHHHHHhcCcccchhHHHHHHHhhhhhccCcccCccccCCcccccccee
Confidence            999999999999999987   47779999999999999998888999999999999999999999999999998888886


Q ss_pred             c
Q 020767          316 L  316 (321)
Q Consensus       316 ~  316 (321)
                      .
T Consensus       361 ~  361 (362)
T KOG1546|consen  361 C  361 (362)
T ss_pred             c
Confidence            4

>PF00656 Peptidase_C14: Caspase domain; InterPro: IPR011600 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd00032 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis) Back     alignment and domain information
>smart00115 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues Back     alignment and domain information
>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4249 Uncharacterized protein containing caspase domain [General function prediction only] Back     alignment and domain information
>PF14538 Raptor_N: Raptor N-terminal CASPase like domain Back     alignment and domain information
>KOG1348 consensus Asparaginyl peptidases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1349 consensus Gpi-anchor transamidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4249 Uncharacterized protein containing caspase domain [General function prediction only] Back     alignment and domain information
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF12770 CHAT: CHAT domain Back     alignment and domain information
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair] Back     alignment and domain information
>COG4995 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
4f6o_A350 Crystal Structure Of The Yeast Metacaspase Yca1 Len 6e-19
4afr_A367 The Structure Of Metacaspase 2 (C213a Mutant) From 4e-16
4af8_A367 The Structural Basis For Metacaspase Substrate Spec 4e-16
4afp_A367 The Structure Of Metacaspase 2 From T. Brucei Deter 6e-16
3bij_A285 Crystal Structure Of Protein Gsu0716 From Geobacter 2e-06
>pdb|4F6O|A Chain A, Crystal Structure Of The Yeast Metacaspase Yca1 Length = 350 Back     alignment and structure 
Iteration: 1

 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 21/271 (7%)
Query: 7   KRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSV-MPTGA 65
           +R A+++G NY  +KN+L GCIND   + + + N +G+  + I +LTD     V +PT A
Sbjct: 53  RRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRA 112
Query: 66  NIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFN----LITD 121
           N+  A+  +V  A+  D L  HYSGHG +   L         D+ I P DF     +I D
Sbjct: 113 NMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGD-EEDGMDDVIYPVDFETQGPIIDD 171
Query: 122 LDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPF 181
                +V  L +G   T   DSCHSG ++D       P +   +   K+   +  K +  
Sbjct: 172 EMHDIMVKPLQQGVRLTALFDSCHSGTVLDL------PYTYSTKGIIKEPNIW--KDVGQ 223
Query: 182 QSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSG 241
             +   +S  T    + IG+ L   F    +++  +  N   +          D ++LSG
Sbjct: 224 DGLQAAISYATGNRAALIGS-LGSIF---KTVKGGMGNNVDRERVRQIKFSAADVVMLSG 279
Query: 242 CQANETSADMSPMESGGKAYGAFSNAVQRVL 272
            + N+TSAD       G+  GA S+A  +V+
Sbjct: 280 SKDNQTSADAV---EDGQNTGAMSHAFIKVM 307
>pdb|4AFR|A Chain A, The Structure Of Metacaspase 2 (C213a Mutant) From T. Brucei Length = 367 Back     alignment and structure
>pdb|4AF8|A Chain A, The Structural Basis For Metacaspase Substrate Specificity And Activation Length = 367 Back     alignment and structure
>pdb|4AFP|A Chain A, The Structure Of Metacaspase 2 From T. Brucei Determined In The Presence Of Samarium Length = 367 Back     alignment and structure
>pdb|3BIJ|A Chain A, Crystal Structure Of Protein Gsu0716 From Geobacter Sulfurreducens. Northeast Structural Genomics Target Gsr13 Length = 285 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
4f6o_A350 Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 2e-56
4af8_A367 Metacaspase MCA2; hydrolase, cysteine peptidase, c 4e-50
3bij_A285 Uncharacterized protein GSU0716; alpha-beta protei 5e-50
3uoa_B390 Mucosa-associated lymphoid tissue lymphoma transl 3e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae} Length = 350 Back     alignment and structure
 Score =  185 bits (471), Expect = 2e-56
 Identities = 86/316 (27%), Positives = 135/316 (42%), Gaps = 24/316 (7%)

Query: 7   KRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTD-APGSSVMPTGA 65
           +R A+++G NY  +KN+L GCIND   + + + N +G+  + I +LTD       +PT A
Sbjct: 53  RRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRA 112

Query: 66  NIKAALDRMVSKAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFN----LITD 121
           N+  A+  +V  A+  D L  HYSGHG +   L         D+ I P DF     +I D
Sbjct: 113 NMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDG-DEEDGMDDVIYPVDFETQGPIIDD 171

Query: 122 LDFRQLVNRLPKGASFTVFSDSCHSGGLIDKAKEQIGPSSNIDQLRTKQSPAFRPKTIPF 181
                +V  L +G   T   DSCHSG ++D               +         K +  
Sbjct: 172 EMHDIMVKPLQQGVRLTALFDSCHSGTVLDLPYTYST--------KGIIKEPNIWKDVGQ 223

Query: 182 QSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGILLSG 241
             +   +S  T    + IG+    F  V   +   +    V  +  S      D ++LSG
Sbjct: 224 DGLQAAISYATGNRAALIGSLGSIFKTVKGGMGNNVDRERVRQIKFSA----ADVVMLSG 279

Query: 242 CQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHP 301
            + N+TSAD       G+  GA S+A  +V+       S   ++   RK L   ++ Q P
Sbjct: 280 SKDNQTSADAVE---DGQNTGAMSHAFIKVMTLQPQQ-SYLSLLQNMRKELA-GKYSQKP 334

Query: 302 CLYCSDE-NAAATFLL 316
            L  S   +    F++
Sbjct: 335 QLSSSHPIDVNLQFIM 350
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A Length = 367 Back     alignment and structure
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca} Length = 285 Back     alignment and structure
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A* Length = 390 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
4f6o_A350 Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 100.0
4af8_A367 Metacaspase MCA2; hydrolase, cysteine peptidase, c 100.0
3bij_A285 Uncharacterized protein GSU0716; alpha-beta protei 100.0
3uoa_B 390 Mucosa-associated lymphoid tissue lymphoma transl 99.97
1m72_A272 Caspase-1; caspase, cysteine protease, hydrolase-h 99.76
1f1j_A305 Caspase-7 protease; caspase-7, cysteine protease, 99.76
2j32_A250 Caspase-3; Pro-caspase3, thiol protease, hydrolase 99.75
2nn3_C310 Caspase-1; cysteine protease, hydrolase; 3.00A {Sp 99.74
3e4c_A302 Caspase-1; zymogen, inflammasome, ICE, IL-1B, inna 99.74
4ehd_A277 Caspase-3; caspase, apoptosis, allosteric inhibiti 99.74
2fp3_A316 Caspase NC; apoptosis, initiator caspase activatio 99.72
1nw9_B277 Caspase 9, apoptosis-related cysteine protease; XI 99.72
3sir_A259 Caspase; hydrolase; 2.68A {Drosophila melanogaster 99.71
3od5_A278 Caspase-6; caspase domain, apoptotic protease, hyd 99.7
3h11_B271 Caspase-8; cell death, apoptosis, caspase, alterna 99.7
2h54_A178 Caspase-1; allosteric site, dimer interface, hydro 99.56
3h11_A272 CAsp8 and FADD-like apoptosis regulator; cell deat 99.07
1pyo_A167 Caspase-2; apoptosis, caspase, alpha-beta, thiol p 99.07
2dko_A146 Caspase-3; low barrier hydrogen bond, caspase, dru 98.95
1qtn_A164 Caspase-8; apoptosis, dithiane-DIOL, caspase, cyst 98.93
3p45_A179 Caspase-6; protease, huntington'S disease, physio 98.72
2ql9_A173 Caspase-7; cysteine protease, apoptosis, thiol pro 98.7
2ql9_B97 Caspase-7; cysteine protease, apoptosis, thiol pro 92.63
2dko_B103 Caspase-3; low barrier hydrogen bond, caspase, dru 92.5
1sc3_B88 Interleukin-1 beta convertase; malonate-bound casp 92.23
2xzd_B118 Caspase-3; hydrolase-protein binding complex, de n 91.85
1pyo_B105 Caspase-2; apoptosis, caspase, alpha-beta, thiol p 91.67
1qtn_B95 Caspase-8; apoptosis, dithiane-DIOL, caspase, cyst 90.05
3rjm_B117 Caspase-2; caspase-2, caspase, hydrolase-hydrolase 85.61
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=2.9e-51  Score=384.45  Aligned_cols=295  Identities=27%  Similarity=0.397  Sum_probs=189.2

Q ss_pred             CCCCcEEEEEEeecCCCCCCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCC-CCCCCcHHHHHHHHHHHHHhCCCC
Q 020767            3 TKGSKRIAVLVGCNYPNTKNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPG-SSVMPTGANIKAALDRMVSKAEAG   81 (321)
Q Consensus         3 ~~~~~~~Al~IGi~y~~~~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~-~~~~~T~~~I~~~l~~l~~~~~~~   81 (321)
                      .+.++++|||||||||+...+|++|+|||++|+++|++++||++++|++|+|.+. ....||+++|+++|+||+++++++
T Consensus        49 ~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pg  128 (350)
T 4f6o_A           49 QCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPN  128 (350)
T ss_dssp             CCCSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTT
T ss_pred             CCCCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999888999999999999999999889999999999999742 123479999999999999999999


Q ss_pred             CEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCC---CCcHHHHHHHHH-hCCCCCeEEEEEeCCCCCcccccccccc
Q 020767           82 DVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFN---LITDLDFRQLVN-RLPKGASFTVFSDSCHSGGLIDKAKEQI  157 (321)
Q Consensus        82 D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~---~i~~~~l~~ll~-~l~~~~~v~~ilD~C~SG~~~~~~~~~~  157 (321)
                      |++||||||||.+.++. +|+|.+|+|++|||+|++   .|.+++|.++|. .++++++|++||||||||++++.+....
T Consensus       129 D~llfYFSGHG~q~~d~-~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~l~~g~~vt~IlD~ChSGt~ldlp~~~~  207 (350)
T 4f6o_A          129 DSLFLHYSGHGGQTEDL-DGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPLQQGVRLTALFDSCHSGTVLDLPYTYS  207 (350)
T ss_dssp             CEEEEEEESCEEEC------------CEEECCTTHHHHCCEEHHHHHHHHTTTCCTTCEEEEEECSSSCTTTTCCSEEEE
T ss_pred             CEEEEEEcCCceeccCC-CCCcccCCceEEEeccCCcCCcccHHHHHHHHHhhcCCCCeEEEEEccCCCCcccccccccc
Confidence            99999999999999887 788888999999999974   689999999874 5778899999999999999999875432


Q ss_pred             CCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCCCCCCeE
Q 020767          158 GPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSLKPDDGI  237 (321)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (321)
                      ....-+++ ..-+  +...+  ++..... +.  .|. ...+...+..++.. .. +... .....+....|...+..+|
T Consensus       208 ~~g~~~e~-~~~~--~~~~~--~l~~~~~-~~--~g~-~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~vi  275 (350)
T 4f6o_A          208 TKGIIKEP-NIWK--DVGQD--GLQAAIS-YA--TGN-RAALIGSLGSIFKT-VK-GGMG-NNVDRERVRQIKFSAADVV  275 (350)
T ss_dssp             TTEEEECC-CC--------------------------------------------------------------CCCSEEE
T ss_pred             cccccCcc-hhhh--hcccc--ccchhhh-hc--ccc-chhhcccchhhhhh-hc-cccc-cccchhhhhhccCCCCCEE
Confidence            10000000 0000  00000  0000000 00  000 00000000000000 00 0000 0000001112456788999


Q ss_pred             EEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCcccccccCc-cccCccc
Q 020767          238 LLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKEQRFEQHPCLYCSDE-NAAATFL  315 (321)
Q Consensus       238 ~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~~~~~Q~P~l~~~~~-~~~~~f~  315 (321)
                      +||||+++|+|.|...   ++..+|+|||+|+++|+.++. +||.+|++.+|..|+. ++.|+|||+++.+ ..++.|+
T Consensus       276 ~~SgCkD~QtSaD~~~---~g~~~GAmTyafi~aL~~~p~-~tY~~Ll~~~r~~L~~-kysQ~PQLs~s~~~d~~~~f~  349 (350)
T 4f6o_A          276 MLSGSKDNQTSADAVE---DGQNTGAMSHAFIKVMTLQPQ-QSYLSLLQNMRKELAG-KYSQKPQLSSSHPIDVNLQFI  349 (350)
T ss_dssp             EEEEEC----------------CCCHHHHHHHHHHHHCCC-CBHHHHHHHHHHHHTT-TCSCEEEEEESSCCCTTSBCC
T ss_pred             EEEecCCCCchhhhcc---CCceeehhHHHHHHHHHHCCC-CCHHHHHHHHHHHHHh-cCCCCceecccCCCCCCcccc
Confidence            9999999999999986   578899999999999999765 7999999999999986 6899999999987 7777775
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A Back     alignment and structure
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca} Back     alignment and structure
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A* Back     alignment and structure
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B Back     alignment and structure
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A* Back     alignment and structure
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A Back     alignment and structure
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda} Back     alignment and structure
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens} Back     alignment and structure
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A Back     alignment and structure
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster} Back     alignment and structure
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A Back     alignment and structure
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A Back     alignment and structure
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B* Back     alignment and structure
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B* Back     alignment and structure
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ... Back     alignment and structure
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A Back     alignment and structure
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A Back     alignment and structure
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ... Back     alignment and structure
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A* Back     alignment and structure
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens} Back     alignment and structure
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A Back     alignment and structure
>2ql9_B Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_B* 2ql5_B* 2qlb_B* 2qlf_B 2qlj_B* 3edr_B 3ibc_B 3ibf_B 1i51_B Back     alignment and structure
>2dko_B Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 2c2k_B* 2c2m_B* 2c2o_B* 2c1e_B* 2cdr_B* 2cnk_B* 2cnl_B* 2cnn_B* 2cno_B* 2cjy_B 1pau_B 1re1_B* 1rhk_B* 1rhm_B* 1rhq_B* 1rhr_B* 1rhu_B* 1rhj_B* 1i3o_B* 3edq_B ... Back     alignment and structure
>1sc3_B Interleukin-1 beta convertase; malonate-bound caspase-1, hydrolase; 1.80A {Homo sapiens} SCOP: c.17.1.1 PDB: 1ice_B 1bmq_B* 1rwm_B* 1rwk_B* 1rwo_B* 1rwp_B* 1rwv_B* 1rww_B* 1rwn_B* 1sc1_B 1rwx_B 1sc4_B 2h4y_B* 2hbq_B* 2hbr_B* 3ns7_B* 3d6f_B* 3d6h_B* 3d6m_B* 2h4w_B* ... Back     alignment and structure
>2xzd_B Caspase-3; hydrolase-protein binding complex, de novo protein, apoptosi ankyrin repeat protein, ribosome display; 2.10A {Homo sapiens} PDB: 2xzt_B 2y0b_B Back     alignment and structure
>1pyo_B Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 2p2c_B 3r5j_B 3r6g_B 3r7b_B 3r7n_B 3r7s_B 3r6l_B Back     alignment and structure
>1qtn_B Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_B* 3kjq_B* 2y1l_B 1f9e_B* 1qdu_B* Back     alignment and structure
>3rjm_B Caspase-2; caspase-2, caspase, hydrolase-hydrolase inhibitor; HET: 3PX; 2.55A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 321
g1sc3.1261 c.17.1.1 (A:,B:) Interleukin-1beta converting enzy 3e-04

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
d1nw9b_277 Caspase-9 {Human (Homo sapiens) [TaxId: 9606]} 99.92
g1sc3.1261 Interleukin-1beta converting enzyme (a cysteine pr 99.91
g1qtn.1242 Caspase-8 {Human (Homo sapiens) [TaxId: 9606]} 99.88
g1nme.1238 Apopain (caspase-3, cpp32) {Human (Homo sapiens) [ 99.83
g1pyo.1257 Caspase-2 {Human (Homo sapiens) [TaxId: 9606]} 99.83
d1m72a_256 Caspase-1 {Fall armyworm (Spodoptera frugiperda) [ 99.8
d1f1ja_245 Caspase-7 {Human (Homo sapiens) [TaxId: 9606]} 99.76
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Caspase-like
superfamily: Caspase-like
family: Caspase catalytic domain
domain: Caspase-9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.3e-24  Score=195.10  Aligned_cols=243  Identities=13%  Similarity=0.095  Sum_probs=150.4

Q ss_pred             CCCCCCcEEEEEEeec-CCCC--CCCCcchHHHHHHHHHHHHHhcCCCCCcEEEeeCCCCCCCCCcHHHHHHHHHHHHH-
Q 020767            1 METKGSKRIAVLVGCN-YPNT--KNELHGCINDVLAMRDVIINRFGFDPNHIELLTDAPGSSVMPTGANIKAALDRMVS-   76 (321)
Q Consensus         1 ~~~~~~~~~Al~IGi~-y~~~--~~~L~~~~~Da~~~~~~L~~~~gf~~~~i~~L~d~~~~~~~~T~~~I~~~l~~l~~-   76 (321)
                      |.+. |+.+|||||++ |...  ..+..|+.+||+.|+++|++ +||.   |.++.|       +|+++|++++.++.. 
T Consensus        16 m~~~-prG~aLII~n~~f~~~~~l~~r~Ga~~Da~~l~~~l~~-lGF~---V~~~~n-------lt~~~~~~~l~~~~~~   83 (277)
T d1nw9b_          16 LSME-PCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSS-LHFM---VEVKGD-------LTAKKMVLALLELARQ   83 (277)
T ss_dssp             CCCS-SCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHH-TTEE---EEEEES-------CCHHHHHHHHHHHHHS
T ss_pred             CCCC-cccEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHHH-CCCE---EEEeeC-------CCHHHHHHHHHHhhhh
Confidence            4544 68899999997 5432  35667899999999999975 8996   888888       599999999988766 


Q ss_pred             hCCCCCEEEEEeeCCCCccCCCCCCCCCCCCCceEEcCCCCCCcHHHHHHHHH-----hCCCCCeEEEEEeCCCCCcccc
Q 020767           77 KAEAGDVLLFHYSGHGTRIPSLRPIWPFRQQDEAIVPCDFNLITDLDFRQLVN-----RLPKGASFTVFSDSCHSGGLID  151 (321)
Q Consensus        77 ~~~~~D~v~~yfSGHG~~~~~~~~g~~~~~~~~~l~p~D~~~i~~~~l~~ll~-----~l~~~~~v~~ilD~C~SG~~~~  151 (321)
                      ..+++|.++|||+|||.+.... .      ....+...|...+...++...+.     .+ +++..++|+||||++.+.+
T Consensus        84 ~~~~~d~~v~~~~gHG~~~~~~-~------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l-~~kpki~~idaCr~~~~~~  155 (277)
T d1nw9b_          84 DHGALDCCVVVILSHGCQASHL-Q------FPGAVYGTDGCPVSVEKIVNIFNGTSCPSL-GGKPKLFFIQACGGEQKDH  155 (277)
T ss_dssp             CCTTCSEEEEEEEEEEECCCCS-S------SCCEEECTTSCEEEHHHHHHTTCTTTCGGG-TTSCEEEEEEEEC------
T ss_pred             cccCCCEEEEEEeCCCcccccc-c------ccCcccCCccccccHHHHHHHhHHhhhhhc-ccCcEEEEEecccCCcccc
Confidence            4678999999999999986542 0      11223344544445455544332     22 3456789999999998765


Q ss_pred             ccccccCCCCccchhcccCCCCCCCCCCChhhHHHhhhhhccCCCCcccchhhhhccCchhhhhhcCccchhhhhhccCC
Q 020767          152 KAKEQIGPSSNIDQLRTKQSPAFRPKTIPFQSILEHLSSVTKINTSDIGTHLLEFFGVDASLRFRLAPNEVMDLFESWSL  231 (321)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~  231 (321)
                      ...........           ..+...+.            .+....... ....+. .    .       .+.  ...
T Consensus       156 ~~~~~~~~~~~-----------~~~~~~~~------------~~~~~~~~~-~~~~~~-~----~-------~~~--~~p  197 (277)
T d1nw9b_         156 GFEVASTSPED-----------ESPGSNPE------------PDATPFQEG-LRTFDQ-L----D-------AIS--SLP  197 (277)
T ss_dssp             --------------------------------------------CBCCC-------------------------C--CCC
T ss_pred             cccccccCccc-----------cccccccc------------ccccchhcc-cccccc-c----c-------ccc--ccC
Confidence            43211000000           00000000            000000000 000000 0    0       000  023


Q ss_pred             CCCCeEEEeecCCCCcccccCCCCCCCchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh-CCCCCcccccccC
Q 020767          232 KPDDGILLSGCQANETSADMSPMESGGKAYGAFSNAVQRVLKENSGPLSNKEVVLMARKILKE-QRFEQHPCLYCSD  307 (321)
Q Consensus       232 ~~~~~~~lsAc~~~e~A~E~~~~~~~~~~~G~FT~aLl~~L~~~~~~~t~~~L~~~v~~~v~~-~~~~Q~P~l~~~~  307 (321)
                      ...+.++..||.++..|++.      ...+|+||++|++.|++.....++.+++.+|+..|.. .+.+|+|++++..
T Consensus       198 ~~~d~~i~~st~~g~~a~~~------~~~gS~f~~~L~~~l~~~~~~~~l~~il~~V~~~V~~~~~~kQ~P~~~s~L  268 (277)
T d1nw9b_         198 TPSDIFVSYSTFPGFVSWRD------PKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFL  268 (277)
T ss_dssp             CSCSEEEEEECCCCBSSTTC------TTSCBHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHTTCCSCCCCCCEECC
T ss_pred             CcccceEEEecccceEEecC------CCCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCceeeEEeeec
Confidence            56788899999999999874      3467999999999999865557999999999999964 4788999998643
>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]} Back     information, alignment and structure
>d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure