Citrus Sinensis ID: 020778

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
Protein Sequence
MAEEVHMPVTESGPRKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDEDESAPEFRGDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLSEEDGSSDDD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccEHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccc
Coil and Loop (DISEMBL)
maeevhmpvtesgprkrksskkkggkgkkklkvmpgsgervkINNKMRKLFRKRARaynsdddedesapefrgdsslsvknqevegrgssdteredgmdldveneefsddeengeiqpgianfAEGSRAFKMAFKSILRKsvaddalgpVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAekghvkpanyldsHEKFLIGVATKGVVKLFNAVNKAQhaqkglnpsrskDEKLLKKRRKETFfselgktsvstadasakgpnssgtadgegpawaplrdnymltssklkdwdkmpqdstvaadetgrlseedgssddd
Flexible Loop (DISEMBL)
maeevhmpvtesgprkrksskkkggkgkkklkvmpgsgervkinnkmRKLFRKRAraynsdddedesapefrgdsslsvknqevegrgssdteredgmdlDVENEefsddeengeiQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKlvgeklaeeeaerkvkgeakkerhlaaekghvkpanylDSHEKFLIGVATKGVVKLFNAVNKaqhaqkglnpsrskdeklLKKRRKetffselgktsvstadasakgpnssgtadgegpawapLRDNYMLTSsklkdwdkmpqdstvaadetgrlseedgssddd
Low Complexity Region (SEG)
MAEEVHMPVTESGPrkrksskkkggkgkkkLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDEDESAPEFRGDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPsrskdekllkkrrkeTFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLSEEDGSSDDD
Disordered region (IsUnstruct)
*******************************************************************************************************************************RAFKMAFKSILRKSVADDALGPVL***************************************ANYLDSHEKFLIGVATKGVVKLFNAVN********************************************************************************************************
Disordered Region (DISOPRED)
**********************************************************************************************************************************KMAFKSIL************************************************HVKPANYLDSHEKFLIGVATKGVVKLFNAV****************************F*********************************PLRDNYMLTSSKLK*****************************
Disordered Region (DISEMBL)
**********************************PGSGERVKINNKMRKLFRKR*****************************************DGMDLDVEN********NGEIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGE*******************HLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNK************SKDEKLLKKRRKETFFSELGKTSV******************EGPAWAPLRDNYMLTSSKLKDWDKMP***********************
Disordered Region (DISPRO)
****************************************VKINNKMRKLFRKRARA**********************************************************IQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERK***EAK**RHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLN*SRSKDEKLLKKRRKETFFSELG**************************WAPLRDNYMLTSSKLKDW***************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEEVHMPVTESGPRKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDEDESAPEFRGDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLSEEDGSSDDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	321	2.2.26 [Sep-21-2011]
Q5M947	280	RRP15-like protein OS=Rat	yes	no	0.339	0.389	0.389	2e-08
Q3T062	286	RRP15-like protein OS=Bos	yes	no	0.339	0.381	0.378	3e-08
Q9Y3B9	282	RRP15-like protein OS=Hom	yes	no	0.339	0.386	0.394	7e-08
Q9CYX7	281	RRP15-like protein OS=Mus	yes	no	0.339	0.387	0.381	4e-07
Q7ZV20	249	RRP15-like protein OS=Dan	yes	no	0.274	0.353	0.336	2e-05

>sp|Q5M947|RRP15_RAT RRP15-like protein OS=Rattus norvegicus GN=Rrp15 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 9/118 (7%)

Query: 187 HVKPANYLDSH-EKFLIGVATKGVVKLFNAVNKAQH----AQKGLNPSRSKDEKLLKKRR 241
            VKP    D   E+ L  +AT+GVV+LFNAV K Q       K +  S  K  KL+    
Sbjct: 147 RVKPDVIKDKEAERNLQRIATRGVVQLFNAVQKHQRNVDEKVKEVGGSIRKRAKLMSTVS 206

Query: 242 KETFFSEL-GKTSVSTADASAKGPNSSGT--ADGEGPAWAPLRDNYMLTSSKLKDWDK 296
           K+ F S L G    S   ++ K P +  T     EGP W  LRD++M+ +S +KDWDK
Sbjct: 207 KKDFISVLRGMDGASENSSAGKSPKARQTEVKSEEGPGWKILRDDFMMGAS-MKDWDK 263

Rattus norvegicus (taxid: 10116)

>sp|Q3T062|RRP15_BOVIN RRP15-like protein OS=Bos taurus GN=RRP15 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 10/119 (8%)

Query: 187 HVKPANYLDSH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPSRSKDEKLLKKRR 241
            VKP    D   E+ L  +AT+GVV+LFNAV K Q       K    S  K  KL+    
Sbjct: 151 RVKPDVVKDKETERNLQRIATRGVVQLFNAVQKHQKNVDEKVKEAGGSIRKRAKLISSVS 210

Query: 242 KETFFSELGKTSVSTADASAKGPNSSG----TADGEGPAWAPLRDNYMLTSSKLKDWDK 296
           K+ F S L     S ++ ++ G NS          EGP W  LRD++M+ +S +KDWDK
Sbjct: 211 KKDFISVLRGMDGSASEKNSAGKNSKAKQTEAKSEEGPGWTILRDDFMMGAS-MKDWDK 268

Bos taurus (taxid: 9913)

>sp|Q9Y3B9|RRP15_HUMAN RRP15-like protein OS=Homo sapiens GN=RRP15 PE=1 SV=2

 Score = 58.5 bits (140), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 10/119 (8%)

Query: 187 HVKPANYLDSH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPSRSKDEKLLKKRR 241
            VKP    D   E+ L  +AT+GVV+LFNAV K Q       K    S  K  KL+    
Sbjct: 147 RVKPDVVQDKETERNLQRIATRGVVQLFNAVQKHQKNVDEKVKEAGSSMRKRAKLISTVS 206

Query: 242 KETFFSELGKTSVSTAD--ASAKGPNSSGTA--DGEGPAWAPLRDNYMLTSSKLKDWDK 296
           K+ F S L     ST +  +S K P +  T     EGP W  LRD++M+ +S +KDWDK
Sbjct: 207 KKDFISVLRGMDGSTNETASSRKKPKAKQTEVKSEEGPGWTILRDDFMMGAS-MKDWDK 264

Homo sapiens (taxid: 9606)

>sp|Q9CYX7|RRP15_MOUSE RRP15-like protein OS=Mus musculus GN=Rrp15 PE=2 SV=2

 Score = 55.8 bits (133), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 58/118 (49%), Gaps = 9/118 (7%)

Query: 187 HVKPANYLDSH-EKFLIGVATKGVVKLFNAVNKAQH----AQKGLNPSRSKDEKLLKKRR 241
            VKP    D   E+ L  +AT+GVV+LFNAV K Q       K    S  K  KL+    
Sbjct: 147 RVKPDVVKDKEAERNLQRIATRGVVQLFNAVQKHQRNVGEKVKEAGGSVRKRAKLMSTVS 206

Query: 242 KETFFSEL-GKTSVSTADASAKGPNSSGT--ADGEGPAWAPLRDNYMLTSSKLKDWDK 296
           K+ F S L G    S    + K P +  T     E P W  LRD++M+ +S +KDWDK
Sbjct: 207 KKDFISVLRGMDGTSRNSPAGKSPKARQTEVKSEESPGWKILRDDFMMGAS-MKDWDK 263

Mus musculus (taxid: 10090)

>sp|Q7ZV20|RRP15_DANRE RRP15-like protein OS=Danio rerio GN=rrp15 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 19/107 (17%)

Query: 197 HEKFLIGVATKGVVKLFNAVNKAQHAQKGLNP-------SRSKDEKLLKKRRKETFFSEL 249
           HE+ L  VAT+GVV+LFNA+   ++ QK +N        S  K  K+L    K+ F   L
Sbjct: 130 HERNLQRVATRGVVQLFNAL---KNHQKNVNERIKEVGGSERKKSKILSSVSKKDFIDVL 186

Query: 250 GKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDK 296
             T V+           S        +W+ L+D++M+ +S +KDWDK
Sbjct: 187 RGTDVAVKKEKEIKAEKS--------SWSVLKDDFMMGAS-MKDWDK 224

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
225447482	320	PREDICTED: uncharacterized protein LOC10	0.978	0.981	0.626	7e-89
224129238	307	predicted protein [Populus trichocarpa]	0.922	0.964	0.607	1e-88
449453624	320	PREDICTED: uncharacterized protein LOC10	0.943	0.946	0.623	2e-87
363807296	334	uncharacterized protein LOC100780091 [Gl	0.975	0.937	0.578	6e-84
296085060	274	unnamed protein product [Vitis vinifera]	0.834	0.978	0.647	2e-83
356505861	335	PREDICTED: RRP15-like protein-like [Glyc	0.981	0.940	0.560	3e-81
388495404	334	unknown [Lotus japonicus]	0.934	0.898	0.515	1e-79
79531832	309	uncharacterized protein [Arabidopsis tha	0.878	0.912	0.565	1e-77
255567238	307	conserved hypothetical protein [Ricinus	0.937	0.980	0.604	2e-77
8777414	339	unnamed protein product [Arabidopsis tha	0.906	0.858	0.541	3e-76

>gi|225447482|ref|XP_002264683.1| PREDICTED: uncharacterized protein LOC100249313 isoform 1 [Vitis vinifera] gi|359485781|ref|XP_003633334.1| PREDICTED: uncharacterized protein LOC100249313 isoform 2 [Vitis vinifera]

 Score =  333 bits (853), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 13/327 (3%)

Query: 1   MAEEVHMPVTESGPRKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNS 60
           MAEE     T +  +KR+  +KKG K KKKLK   GSGER+KI+ +M+KLFRKRAR YNS
Sbjct: 1   MAEESQKLETVNLSKKRRLGRKKGNKTKKKLKGFDGSGERIKIDRRMKKLFRKRARDYNS 60

Query: 61  DDDEDES-----APEFRGDSSLSV-KNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENG 114
           DDDEDE      A   +G++++ + K   ++G+ SS+ E ED  D+D ENE    ++E G
Sbjct: 61  DDDEDEGDDGGYAVATKGENAVPIIKEVALDGKDSSE-EEEDHQDIDEENE--ISEDEEG 117

Query: 115 EIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGE 174
           EIQPGI    EG RAF++AFK I++K+V+D +LGPVLS HKKLV EKLAEEEA++KVKG+
Sbjct: 118 EIQPGITKLTEGCRAFRLAFKKIIKKNVSDISLGPVLSGHKKLVAEKLAEEEADQKVKGD 177

Query: 175 AKKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDE 234
            KKE+HL  EKGHVKPAN+LDSHEKFLIGVATKGVVKLFNAVNKAQ+AQKGLN SR KDE
Sbjct: 178 VKKEKHLLGEKGHVKPANFLDSHEKFLIGVATKGVVKLFNAVNKAQNAQKGLNASRFKDE 237

Query: 235 KLLKKRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDW 294
           K + KRRKE FFSELGKT+ S+A   AK   SSG  DGEGPAWAPLRD+YMLTSSKLK+W
Sbjct: 238 KAIIKRRKEAFFSELGKTAWSSAGTPAKAHRSSGPVDGEGPAWAPLRDSYMLTSSKLKNW 297

Query: 295 DKMPQDSTVAADETGRLSEEDGSSDDD 321
           DKMP   ++  DE  R+  +  SSDDD
Sbjct: 298 DKMPD--SITEDEIERMPLD--SSDDD 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129238|ref|XP_002320535.1| predicted protein [Populus trichocarpa] gi|222861308|gb|EEE98850.1| predicted protein [Populus trichocarpa]

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 190/313 (60%), Positives = 230/313 (73%), Gaps = 17/313 (5%)

Query: 1   MAEEVHMPVTESGPRKRKSSKKKGGKGKKKLKVMPGSGERVK-INNKMRKLFRKRARAYN 59
           MAEE  M  +    +KRKS  KKGG  KKK K   G+ E+VK I+ +++KL RK+AR YN
Sbjct: 1   MAEETQMRESVKPFKKRKSGHKKGGNFKKKQKQFLGNKEKVKKIDPRLKKLLRKKARDYN 60

Query: 60  SDDD-EDESAPEFRGDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDEENGEIQP 118
           SDDD EDE+A     D++ S+ +      G    + +  + +++E  E  DD+E   I P
Sbjct: 61  SDDDNEDETAHASEDDNADSMDDDVSSDDG----KEKKNLGIEIEGSENEDDDE---IPP 113

Query: 119 GIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKE 178
           GI  F+EG RAF++AFKSI +K+++DD+LGPVLS HK LV EKLAEE AER+VKG+AKKE
Sbjct: 114 GITKFSEGCRAFRIAFKSISKKAISDDSLGPVLSGHKTLVAEKLAEEVAERRVKGDAKKE 173

Query: 179 RHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLK 238
           +HL  EKGHVKPANYLD+HEKFLI VATKGVVKLFNAVNKAQ+AQKGLNPSRSKD K++K
Sbjct: 174 KHLVGEKGHVKPANYLDAHEKFLISVATKGVVKLFNAVNKAQNAQKGLNPSRSKDAKVIK 233

Query: 239 KRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMP 298
           KRRKE FFSELGKT V  AD S K   SS    GEGP+WAPLRDNYMLT+SKLKDWDKMP
Sbjct: 234 KRRKERFFSELGKTPV--ADTSTKVHASS----GEGPSWAPLRDNYMLTNSKLKDWDKMP 287

Query: 299 QDSTVAADETGRL 311
               V  D+ GR+
Sbjct: 288 --DKVVHDDIGRM 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453624|ref|XP_004144556.1| PREDICTED: uncharacterized protein LOC101216086 [Cucumis sativus] gi|449528421|ref|XP_004171203.1| PREDICTED: uncharacterized LOC101216086 [Cucumis sativus]

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/313 (62%), Positives = 239/313 (76%), Gaps = 10/313 (3%)

Query: 15  RKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNSDDDED--ESAPEFR 72
           R  K  KK G +  K+ ++M GSG +VKI+ KM+KLF+KRAR YNSDDD+D  E AP  +
Sbjct: 12  RGAKRRKKMGSRNNKRPRMMGGSGNKVKIDKKMKKLFQKRAREYNSDDDDDDGEKAPRVK 71

Query: 73  GDSSLSVKNQEVE----GRGSSDTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSR 128
            +S + V++ E E         + ER+D ++ DVE    S+D+ENGEIQPGI  F EG R
Sbjct: 72  KESKILVRSHEEEVGDEEFSEGEEERKD-VNADVE---LSEDDENGEIQPGITKFTEGCR 127

Query: 129 AFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHV 188
           AF+ AF SIL+K+++D+ LGP+LSA+KKLV EKLAEEEAERKVKGEA+K + L  EKGHV
Sbjct: 128 AFRAAFMSILKKNISDETLGPILSANKKLVAEKLAEEEAERKVKGEARKAKQLVGEKGHV 187

Query: 189 KPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSE 248
           KPA YLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSR+KD K + KRRKE FFSE
Sbjct: 188 KPATYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRTKDAKAINKRRKEAFFSE 247

Query: 249 LGKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADET 308
           LGK ++S  +++AK   S G AD EGPAWAPLRDNYMLT+SKLKDWDKMP +   AA++ 
Sbjct: 248 LGKPTLSATNSNAKLNTSGGAADTEGPAWAPLRDNYMLTNSKLKDWDKMPDNMMTAAEDN 307

Query: 309 GRLSEEDGSSDDD 321
           GR+ E+  S +DD
Sbjct: 308 GRVLEDSSSDEDD 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807296|ref|NP_001242109.1| uncharacterized protein LOC100780091 [Glycine max] gi|255641272|gb|ACU20913.1| unknown [Glycine max]

 Score =  317 bits (811), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 198/342 (57%), Positives = 235/342 (68%), Gaps = 29/342 (8%)

Query: 1   MAEEVHMPVTESGPRKRKSSKKKGGK-GKKKLKVMPGS--GERVKINNKMRKLFRKRARA 57
           MAEE+ M   E G  KRK  KK+G K    K KVMP     ++VKI+ KM+KLFRKRAR 
Sbjct: 1   MAEEMTM--VEPGRGKRKFFKKQGHKKSSNKAKVMPPQHGQKKVKIDKKMKKLFRKRARG 58

Query: 58  YNSDD-DEDESAPEFRGDSSL-SVKNQEVEGRGSSDTEREDGMD---------------L 100
           YNSDD DE+ + P      SL S+ N+  +     DTE EDG +                
Sbjct: 59  YNSDDEDEEATVPATSEPKSLASITNKRND---EDDTESEDGSEDEGAAGPQKTWNKNAT 115

Query: 101 DVENEEFSDD-EENGEIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVG 159
           D+ N    D+ E++ EIQPGI  F EG RAFKMAFK+I++KSV DD LGP+LS  +KLV 
Sbjct: 116 DMNNHSSDDEGEDDNEIQPGITKFTEGCRAFKMAFKNIMQKSVPDDMLGPILSGQRKLVV 175

Query: 160 EKLAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKA 219
           +KLAEEEAE KVKGEAKKE+ + AEKGHVKPA YLDSHEKFLI VATKGVVKLFNAVNKA
Sbjct: 176 DKLAEEEAESKVKGEAKKEKKMLAEKGHVKPATYLDSHEKFLISVATKGVVKLFNAVNKA 235

Query: 220 QHAQKGLNPSRSKDEKLLKKRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAP 279
           Q AQKGLNPSR+KD K ++KR K+ FFSELGK S+     + K   S+   + E PAWAP
Sbjct: 236 QTAQKGLNPSRTKDAKEIRKRTKQAFFSELGKPSLPAIGTTTKAKESTDRVEDEQPAWAP 295

Query: 280 LRDNYMLTSSKLKDWDKMPQDSTVAADETGRLSEEDGSSDDD 321
           LRDNYMLTSS+LKDWDKMP D  V +D+ G+ S ED SSD+D
Sbjct: 296 LRDNYMLTSSRLKDWDKMP-DKNV-SDDMGKTS-EDSSSDED 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085060|emb|CBI28475.3| unnamed protein product [Vitis vinifera]

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 182/281 (64%), Positives = 218/281 (77%), Gaps = 13/281 (4%)

Query: 47  MRKLFRKRARAYNSDDDEDES-----APEFRGDSSLSV-KNQEVEGRGSSDTEREDGMDL 100
           M+KLFRKRAR YNSDDDEDE      A   +G++++ + K   ++G+ SS+ E ED  D+
Sbjct: 1   MKKLFRKRARDYNSDDDEDEGDDGGYAVATKGENAVPIIKEVALDGKDSSE-EEEDHQDI 59

Query: 101 DVENEEFSDDEENGEIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGE 160
           D ENE    ++E GEIQPGI    EG RAF++AFK I++K+V+D +LGPVLS HKKLV E
Sbjct: 60  DEENE--ISEDEEGEIQPGITKLTEGCRAFRLAFKKIIKKNVSDISLGPVLSGHKKLVAE 117

Query: 161 KLAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQ 220
           KLAEEEA++KVKG+ KKE+HL  EKGHVKPAN+LDSHEKFLIGVATKGVVKLFNAVNKAQ
Sbjct: 118 KLAEEEADQKVKGDVKKEKHLLGEKGHVKPANFLDSHEKFLIGVATKGVVKLFNAVNKAQ 177

Query: 221 HAQKGLNPSRSKDEKLLKKRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPL 280
           +AQKGLN SR KDEK + KRRKE FFSELGKT+ S+A   AK   SSG  DGEGPAWAPL
Sbjct: 178 NAQKGLNASRFKDEKAIIKRRKEAFFSELGKTAWSSAGTPAKAHRSSGPVDGEGPAWAPL 237

Query: 281 RDNYMLTSSKLKDWDKMPQDSTVAADETGRLSEEDGSSDDD 321
           RD+YMLTSSKLK+WDKMP   ++  DE  R+  +  SSDDD
Sbjct: 238 RDSYMLTSSKLKNWDKMPD--SITEDEIERMPLD--SSDDD 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505861|ref|XP_003521708.1| PREDICTED: RRP15-like protein-like [Glycine max]

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 191/341 (56%), Positives = 238/341 (69%), Gaps = 26/341 (7%)

Query: 1   MAEEVHMPVTESGPRKRKSSKKKGGK-GKKKLKVMPGS--GERVKINNKMRKLFRKRARA 57
           MAEE+ M   E G  KRK  K +G K   KK KVMP     ++VKI+ KM+KLFRKRAR 
Sbjct: 1   MAEEMKM--VEPGRGKRKFFKTQGHKKSSKKAKVMPPQHGQKKVKIDKKMKKLFRKRARE 58

Query: 58  YNSDDDEDESAP-----EFRGDSSLSVKNQEVEGRGSSDTEREDG------------MDL 100
           YNSDD+ED+ A      E +  +S++ K  + +G  S D   ++G             D+
Sbjct: 59  YNSDDEEDDEATVPATLEPKSLASITNKRNDKDGIESEDRSEDEGAAGPQKTWNKNATDM 118

Query: 101 DVENEEFSDDEENGEIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGE 160
           +  + +  + E++ EIQPGI  F EG RAFKMAF+++++KSV DD LGP+LS  +KLV +
Sbjct: 119 NYHSSD-DEGEDDDEIQPGITKFTEGCRAFKMAFRNLMKKSVPDDMLGPILSGQRKLVVD 177

Query: 161 KLAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQ 220
           KLAEEEAERKVKGEAKKE+ + AEKGHVKPA YLDSHEKFLI VATKGVVKLFNAVNKAQ
Sbjct: 178 KLAEEEAERKVKGEAKKEKQMLAEKGHVKPATYLDSHEKFLISVATKGVVKLFNAVNKAQ 237

Query: 221 HAQKGLNPSRSKDEKLLKKRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPL 280
            AQ+GL+PSR+KD K ++KR K+ FFSELGK S+     + K   S+   + E PAWAPL
Sbjct: 238 TAQRGLDPSRTKDAKEIRKRTKQAFFSELGKPSLPAIGTTTKAKESTDRVEDEQPAWAPL 297

Query: 281 RDNYMLTSSKLKDWDKMPQDSTVAADETGRLSEEDGSSDDD 321
           RDNYMLTSSKLKDWDKMP D  V +D+ G+ S ED SSD+D
Sbjct: 298 RDNYMLTSSKLKDWDKMP-DKNV-SDDMGKTS-EDSSSDED 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495404|gb|AFK35768.1| unknown [Lotus japonicus]

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 183/355 (51%), Positives = 225/355 (63%), Gaps = 55/355 (15%)

Query: 1   MAEEVHMPVTESGPRKRK---SSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARA 57
           MA+E  +      PRKRK   + + K  K + K K      E+VK+N +M+KL+ KRAR 
Sbjct: 1   MADETQLMEPGRDPRKRKFVKNQRHKNSKLRPKGKPAQHGQEKVKVNQEMKKLYHKRARE 60

Query: 58  YNSDDDEDE--SAPEF---RGDSSLSVKNQEVEGRGSSDTEREDGMDLDVENEEFSDDE- 111
           YNSDDDE++  +AP     R  +S+  +  EV+               D+ENE+ SDDE 
Sbjct: 61  YNSDDDEEDETAAPATTRPRRMTSIKYEKNEVD---------------DIENEDLSDDEG 105

Query: 112 -ENGE------------------------IQPGIANFAEGSRAFKMAFKSILRKSVADDA 146
              GE                        I PGI  F EG +AFK+AF SI++KSV+DD 
Sbjct: 106 AAGGEKVKNKNVTFMKNHNYEGEEEDDGEILPGITKFTEGCKAFKLAFMSIVKKSVSDDL 165

Query: 147 LGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSHEKFLIGVAT 206
           L P+LSA+K LV EKLAEE AERK K EA+KE+ + AEKGHVKPA YLD+HEKFLI VAT
Sbjct: 166 LNPILSANKNLVVEKLAEEVAERKGKREARKEKQMLAEKGHVKPATYLDTHEKFLISVAT 225

Query: 207 KGVVKLFNAVNKAQHAQKGLNPSRSKDEKLLKKRRKETFFSELGKTSVSTADASAKGPNS 266
           KGVVKLFNAVNKAQ AQKG NPSR KD K L+KR KE FFSELGK S+        G  S
Sbjct: 226 KGVVKLFNAVNKAQVAQKGFNPSRIKDAKELRKRTKEAFFSELGKPSLPGTSGKVNG--S 283

Query: 267 SGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLSEEDGSSDDD 321
           +  A+ E PAWAPL+DNYMLTSSKLKDWDKMP  +   +D+TG++SE+  SSD+D
Sbjct: 284 TSNAEDEQPAWAPLQDNYMLTSSKLKDWDKMPNKNV--SDDTGKISED--SSDED 334

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79531832|ref|NP_199635.2| uncharacterized protein [Arabidopsis thaliana] gi|332008257|gb|AED95640.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  296 bits (757), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 173/306 (56%), Positives = 210/306 (68%), Gaps = 24/306 (7%)

Query: 3   EEVHMPVTESGPRKRKSSKKKGGKG--KKKLKVMPGSGERVKINNKMRKLFRKRARAYNS 60
           EE HM + + G RKR+   KKG K    KK K  P + +R K+  K +KLF+KRAR YNS
Sbjct: 5   EEGHMAMADRGSRKRRVGVKKGTKAARNKKQKSKPSTSDRFKVTMKNQKLFQKRARDYNS 64

Query: 61  DDDEDESAPEFRGDSSLSVKNQEVEGRGSSDTEREDGMDLDV----ENEEFSDDEENGEI 116
           DDDE+E           S K  EV  R    ++   G + +     +N+E SD E++GEI
Sbjct: 65  DDDEEED--------DESKKQPEVTIREKIFSDANMGPNYEEIGEEDNDENSDGEDHGEI 116

Query: 117 QPGIANFA-EGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEA 175
           + GI  FA +G  AFK+AFK+I++K+  DD LGPVLSAHK L+GEKLAE+EAE+K KG+A
Sbjct: 117 ESGITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQA 176

Query: 176 KKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEK 235
           +K +HL AEKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKD K
Sbjct: 177 RKAKHLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAK 236

Query: 236 LLKKRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWD 295
           +LKKRRKE F SELGKT   T          +  ++ E P WAPLRDNYML + KLKDWD
Sbjct: 237 VLKKRRKEAFLSELGKTKTDT---------KAHKSEDEAPVWAPLRDNYMLANPKLKDWD 287

Query: 296 KMPQDS 301
           K  + S
Sbjct: 288 KKQETS 293

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567238|ref|XP_002524600.1| conserved hypothetical protein [Ricinus communis] gi|223536153|gb|EEF37808.1| conserved hypothetical protein [Ricinus communis]

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 196/324 (60%), Positives = 239/324 (73%), Gaps = 23/324 (7%)

Query: 1   MAEEVHMPVTESGPRKRKSSKKKGGKGKKKLKVMPGSGERVKINNKMRKLFRKRARAYNS 60
           MAEE HM  + +  RKRK  +KKG K KKK K   G   RV+ + K+ KL RK+AR YNS
Sbjct: 1   MAEETHMQQSINPFRKRKLGQKKGKKAKKKQKQFQGMKGRVRKDPKIMKLLRKKARDYNS 60

Query: 61  DDDEDESAPE----FRGDSSLSVKNQEVEGRGSSDTERED-GMDLDVENEEFSDDEENGE 115
           DDDEDE   E          +S+K+ +     + D E++D G+++D  + E  ++EE+GE
Sbjct: 61  DDDEDEEEEEKTHVIDDKKIVSLKDND-----NDDGEKKDLGIEIDGSDLEEEEEEEDGE 115

Query: 116 IQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEA 175
           IQPGI    EG RAFK+AF SI++KSV+DD+LGPVLS HKKLV EKLAEE++ERKVKGEA
Sbjct: 116 IQPGITKLIEGCRAFKIAFNSIIKKSVSDDSLGPVLSGHKKLVAEKLAEEDSERKVKGEA 175

Query: 176 KKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEK 235
           KKE+ L  EKGHVKPANYLDSHEK+LIG+ATKGVVKLFNAVNKAQ++QKGL+PSR+KD K
Sbjct: 176 KKEKKLMEEKGHVKPANYLDSHEKYLIGLATKGVVKLFNAVNKAQNSQKGLDPSRTKDAK 235

Query: 236 LLKKRRKETFFSELGKTSVSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWD 295
           ++ KRRKE FFSELGKTSVS A            A  EGP+WAPLRDNYMLT+SKLKDWD
Sbjct: 236 VINKRRKEAFFSELGKTSVSNA-----------AAKPEGPSWAPLRDNYMLTNSKLKDWD 284

Query: 296 KMPQDSTVAADETGRLSEEDGSSD 319
           KMP   TV AD+ G++SE+ GS D
Sbjct: 285 KMPD--TVVADDIGKMSEDSGSDD 306

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8777414|dbj|BAA97004.1| unnamed protein product [Arabidopsis thaliana]

 Score =  291 bits (745), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 177/327 (54%), Positives = 214/327 (65%), Gaps = 36/327 (11%)

Query: 3   EEVHMPVTESGPRKRKSSKKKGGKG--KKKLKVMPGSGERVKINNKMRKLFRKRARAYNS 60
           EE HM + + G RKR+   KKG K    KK K  P + +R K+  K +KLF+KRAR YNS
Sbjct: 5   EEGHMAMADRGSRKRRVGVKKGTKAARNKKQKSKPSTSDRFKVTMKNQKLFQKRARDYNS 64

Query: 61  DDDEDESAPEFRGDSSLSVKNQEVEGRGSSDTEREDGMDLDV----ENEEFSDDEENGEI 116
           DDDE+E           S K  EV  R    ++   G + +     +N+E SD E++GEI
Sbjct: 65  DDDEEED--------DESKKQPEVTIREKIFSDANMGPNYEEIGEEDNDENSDGEDHGEI 116

Query: 117 QPGIANFA-EGSRAFKMAFKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEA 175
           + GI  FA +G  AFK+AFK+I++K+  DD LGPVLSAHK L+GEKLAE+EAE+K KG+A
Sbjct: 117 ESGITKFATDGCNAFKIAFKAIMKKTKGDDTLGPVLSAHKHLIGEKLAEDEAEKKAKGQA 176

Query: 176 KKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDEK 235
           +K +HL AEKGHVKP +YLDSHEK LIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKD K
Sbjct: 177 RKAKHLIAEKGHVKPGSYLDSHEKILIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKDAK 236

Query: 236 LLKKRRKETFFSELGKTSVSTADASA-----------------KGPNSSGTA----DGEG 274
           +LKKRRKE F SELGKT   T  ++                  KG  S   A    + E 
Sbjct: 237 VLKKRRKEAFLSELGKTKTDTKPSTLDEHRSKLVFCLELASIEKGSPSVARAAHKSEDEA 296

Query: 275 PAWAPLRDNYMLTSSKLKDWDKMPQDS 301
           P WAPLRDNYML + KLKDWDK  + S
Sbjct: 297 PVWAPLRDNYMLANPKLKDWDKKQETS 323

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
TAIR|locus:2164708	356	AT5G48240 "AT5G48240" [Arabido	0.707	0.637	0.534	3.3e-71
RGD|1306106	280	Rrp15 "ribosomal RNA processin	0.809	0.928	0.284	2.8e-14
UNIPROTKB|I3LCG6	287	RRP15 "Uncharacterized protein	0.781	0.874	0.292	5.4e-13
UNIPROTKB|E2R2X0	288	RRP15 "Uncharacterized protein	0.707	0.788	0.279	6.7e-12
MGI|MGI:1914473	281	Rrp15 "ribosomal RNA processin	0.651	0.743	0.301	7.9e-12
UNIPROTKB|F1P155	249	RRP15 "Uncharacterized protein	0.663	0.855	0.295	1.7e-11
ZFIN|ZDB-GENE-030131-5261	249	rrp15 "ribosomal RNA processin	0.704	0.907	0.270	4.5e-11
UNIPROTKB|Q9Y3B9	282	RRP15 "RRP15-like protein" [Ho	0.666	0.758	0.297	3.7e-10
SGD|S000006347	250	RRP15 "Nucleolar protein" [Sac	0.563	0.724	0.286	9.2e-06
CGD|CAL0000267	255	RRP15 [Candida albicans (taxid	0.523	0.658	0.271	1.3e-05

TAIR|locus:2164708 AT5G48240 "AT5G48240" [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
 Identities = 124/232 (53%), Positives = 156/232 (67%)

Query:    32 KVMPGSGERVKINNKMRKLFRKRARAYNSDDDEDESAPEFRGDSSLSVKNQEVEGRGSSD 91
             K  P + +R K+  K +KLF+KRAR YNSDDDE+E   E +    ++++ +         
Sbjct:    36 KSKPSTSDRFKVTMKNQKLFQKRARDYNSDDDEEED-DESKKQPEVTIREKIFSDANMGP 94

Query:    92 TEREDGMDLDVENEEFSDDEENGEIQPGIANFA-EGSRAFKMAFKSILRKSVADDALGPV 150
                E G +   +N+E SD E++GEI+ GI  FA +G  AFK+AFK+I++K+  DD LGPV
Sbjct:    95 NYEEIGEE---DNDENSDGEDHGEIESGITKFATDGCNAFKIAFKAIMKKTKGDDTLGPV 151

Query:   151 LSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSHEKFLIGVATKGVV 210
             LSAHK L+GEKLAE+EAE+K KG+A+K +HL AEKGHVKP +YLDSHEK LIGVATKGVV
Sbjct:   152 LSAHKHLIGEKLAEDEAEKKAKGQARKAKHLIAEKGHVKPGSYLDSHEKILIGVATKGVV 211

Query:   211 KLFNAVNKAQHAQKGLNPXXXXXXXXXXXXXXXTFFSELGKTSVSTADASAK 262
             KLFNAVNKAQHAQKGLNP                F SELGKT   T    A+
Sbjct:   212 KLFNAVNKAQHAQKGLNPSRSKDAKVLKKRRKEAFLSELGKTKTDTKPFDAR 263

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005730 "nucleolus" evidence=IDA

GO:0001510 "RNA methylation" evidence=RCA

RGD|1306106 Rrp15 "ribosomal RNA processing 15 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 194 (73.4 bits), Expect = 2.8e-14, P = 2.8e-14
 Identities = 83/292 (28%), Positives = 132/292 (45%)

Query:    32 KVMPGSGERVKINNKMRKLFRKRARAYNSDDDEDESAPEFRGDSSLSVKNQEVEGRGSSD 91
             +V PG   ++K + K +K  +K A+A  S   EDE      G+ S   +  + +  G+++
Sbjct:     9 RVNPGG--KLKRSPKKKKKMKKVAKAAVSKL-EDELKDSSGGEGSCESEMDDSDD-GAAE 64

Query:    92 TEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRA-FKMAFKSILRKSVADDALGPV 150
              + ED ++        S +EEN E+    A  + G+ + +  A   IL K         +
Sbjct:    65 ADSEDNVE--------SCEEEN-EVA---AESSAGTNSGWADAMAKILNKKTPKSK-PTI 111

Query:   151 LSAHKKLVGEK--LAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSH-EKFLIGVATK 207
             L+ +K+L  EK  L +E  E++ + + K+E  +      VKP    D   E+ L  +AT+
Sbjct:   112 LTKNKELEKEKEKLKQERLEKRKQIDKKREWEMLCR---VKPDVIKDKEAERNLQRIATR 168

Query:   208 GVVKLFNAVNKAQH----AQKGLNPXXXXXXXXXXXXXXXTFFSEL-GKTSVSTADASAK 262
             GVV+LFNAV K Q       K +                  F S L G    S   ++ K
Sbjct:   169 GVVQLFNAVQKHQRNVDEKVKEVGGSIRKRAKLMSTVSKKDFISVLRGMDGASENSSAGK 228

Query:   263 GPNSSGTA--DGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLS 312
              P +  T     EGP W  LRD++M+ +S +KDWDK  +    A  + G  S
Sbjct:   229 SPKARQTEVKSEEGPGWKILRDDFMMGAS-MKDWDKESEGEEPADGQAGSAS 279

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|I3LCG6 RRP15 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 186 (70.5 bits), Expect = 5.4e-13, P = 5.4e-13
 Identities = 82/280 (29%), Positives = 127/280 (45%)

Query:    37 SGERVKINNKMRKLFRKRARAYNSD-DDEDESAPEFRGDSSLSVKNQEVEGRGSSDTERE 95
             +G+++K + K +K  +  A A  S+ DD+D+   +  G S  S  + +   R SSD E  
Sbjct:    12 AGKKLKNSVKKKKKMKVVAAAVASELDDKDKDTAD-NGGSVGSCGSGD--NRFSSDDEAV 68

Query:    96 DGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKMAFKSILRKSVADDALGPVLSAHK 155
             +  D + E E    D E+   + G+   A  + A  MA   +L K +       +L  +K
Sbjct:    69 EA-DNEDEAEPCDSDSEDAA-EAGVGTSAGWADA--MA--KVLNKKIPKSK-PTILVKNK 121

Query:   156 KLVGEK--LAEEEAERKVKGEAKKERHLAAEKGHVKPANYLDSH-EKFLIGVATKGVVKL 212
             +L  EK  L +E  E++ + + K+E  +      VKP    D   E+ L  +AT+GVV+L
Sbjct:   122 ELEKEKERLKQERLEKRKQLDKKREWEMMCR---VKPDVVQDKEPERNLQRIATRGVVQL 178

Query:   213 FNAVNKAQ----HAQKGLNPXXXXXXXXXXXXXXXTFFSELGKTSVSTADASAKGPNSSG 268
             FNAV K Q       K                    F S L     +  + S+ G NS  
Sbjct:   179 FNAVQKHQKNVDEKVKEAGGSIRKHAKLLSAVSKKDFISVLRGVDGAPNEKSSTGKNSKA 238

Query:   269 TADG----EGPAWAPLRDNYMLTSSKLKDWDKM---PQDS 301
                     EGP W  LRD++ML ++ +KDWD+    P+DS
Sbjct:   239 KQTEVKAEEGPGWTILRDDFMLGAT-MKDWDRESDGPEDS 277

GO:0005739 "mitochondrion" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|E2R2X0 RRP15 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 178 (67.7 bits), Expect = 6.7e-12, P = 6.7e-12
 Identities = 71/254 (27%), Positives = 113/254 (44%)

Query:    83 EVEGRGSSD---TEREDGMDLD-VENEEFSDDEENGEIQP---GIANFAEGSRAFKMAFK 135
             E EG+ ++D   + R  G++ D   ++E  + +   E++P   G  N AE S    M + 
Sbjct:    40 EDEGKDAADGGGSARSCGLEKDHFSSDEAVEADNEDEVEPYGNGNENAAEASVGTDMGWA 99

Query:   136 SILRKSV---ADDALGPVLSAHKKLVGEK--LAEEEAERKVKGEAKKERHLAAEKGHVKP 190
               + K +      +   +L  +++L  EK  L +E  E++ + + K+E  +      VKP
Sbjct:   100 DAMAKILNRKTPKSKPSILVKNRELEKEKEKLKQERLEKRKQLDKKREWEMMCR---VKP 156

Query:   191 ANYLDSH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPXXXXXXXXXXXXXXXTF 245
                 D   E+ L  +AT+GVV+LFNAV K Q       K                    F
Sbjct:   157 DVVKDKETERNLQRIATRGVVQLFNAVQKHQKNVDEKVKEAGSSIRKRAKLISTVSKKDF 216

Query:   246 FSELGKTSVSTADASAKGPN----SSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDS 301
              S L     ST++ S+ G N     +     E P W  LRD++M+ +S +KDWDK  +  
Sbjct:   217 ISVLRGMDASTSEKSSTGKNLKAKQTEAKSEESPGWTILRDDFMMGAS-MKDWDK--ESD 273

Query:   302 TVAADETGRLSEED 315
              V   E G  S+ D
Sbjct:   274 GVDNSEPGSGSDFD 287

GO:0005739 "mitochondrion" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

MGI|MGI:1914473 Rrp15 "ribosomal RNA processing 15 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 177 (67.4 bits), Expect = 7.9e-12, P = 7.9e-12
 Identities = 70/232 (30%), Positives = 102/232 (43%)

Query:    79 VKNQEVEGRGSSDTERE---DGM-DLDVENEEFSDDEENGEIQPGIANFAEGSRAFKMAF 134
             VK+   +G GS D+E +   DG  + D E+   S +E+N +     A    G   +  A 
Sbjct:    41 VKDSS-DGEGSCDSEMDHSDDGAAEADSEDNVESCEEDNEDAAESSAGTNSG---WADAM 96

Query:   135 KSILRKSVADDALGPVLSAHKKLVGEK--LAEEEAERKVKGEAKKERHLAAEKGHVKPAN 192
               IL K         +L+ +K+L  EK  L +E  E++ + + K+E  +      VKP  
Sbjct:    97 AKILNKKTPKSK-ATILTKNKELEKEKEKLKQERLEKRKQLDKKREWEMLCR---VKPDV 152

Query:   193 YLDSH-EKFLIGVATKGVVKLFNAVNKAQH----AQKGLNPXXXXXXXXXXXXXXXTFFS 247
               D   E+ L  +AT+GVV+LFNAV K Q       K                    F S
Sbjct:   153 VKDKEAERNLQRIATRGVVQLFNAVQKHQRNVGEKVKEAGGSVRKRAKLMSTVSKKDFIS 212

Query:   248 EL-GKTSVSTADASAKGPNSSGTA--DGEGPAWAPLRDNYMLTSSKLKDWDK 296
              L G    S    + K P +  T     E P W  LRD++M+ +S +KDWDK
Sbjct:   213 VLRGMDGTSRNSPAGKSPKARQTEVKSEESPGWKILRDDFMMGAS-MKDWDK 263

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P155 RRP15 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 171 (65.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 72/244 (29%), Positives = 111/244 (45%)

Query:    89 SSDTEREDGMDLDVEN--EEFSDDEENGEIQPGIANFAEGSRAFKMAFKSILRKSVADDA 146
             SS  E  DG D D     E  +++  N +  PG + +A+       A   +L K +  + 
Sbjct:    21 SSGDEALDGDDEDEAAVVEHVAEETANSKAGPG-SGWAD-------AMAKVLNKKIPQNK 72

Query:   147 LGPVLSAHKKLVGEKLAE--EEAERKVKGEAKKERHLAAEKGHVKPANYLD-SHEKFLIG 203
                +L+  KKL  E+  E  E  E++ K + K+E  +      VKP    D   E+ L  
Sbjct:    73 -SIILAKSKKLEKEREKERQERLEKRRKLDKKREWEMMCR---VKPDVVKDRDRERNLQR 128

Query:   204 VATKGVVKLFNAV-----NKAQHAQKGLNPXXXXXXXXXXXXXXXTFFSEL-----GKTS 253
             +AT+GVV+LFNAV     N  +  +KG                   F + L      K +
Sbjct:   129 IATRGVVQLFNAVRTHQKNVDEKVKKGAR-SERQRAKLLSSVSKKDFINVLRSMEGAKGN 187

Query:   254 VSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGRLSE 313
              ++A  +AK       ++ EGP W  LRD++M+ +S +KDWDK   D     ++ G L +
Sbjct:   188 HNSARKAAKSKQGEVKSE-EGPEWNILRDDFMMGAS-MKDWDK-ESDGEGNIEQGGGLKQ 244

Query:   314 EDGS 317
             EDGS
Sbjct:   245 EDGS 248

GO:0005730 "nucleolus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

ZFIN|ZDB-GENE-030131-5261 rrp15 "ribosomal RNA processing 15 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 168 (64.2 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 68/251 (27%), Positives = 113/251 (45%)

Query:    75 SSLSVKNQEVEGRGSSDTEREDGMDLDVE-NEEFSDDEENGEIQPGIANFAEGSRAFKMA 133
             S +S+ N E  G   +D++ E G D +   +E+   DEE  E  P  A +AE       A
Sbjct:    20 SEVSISNDEESG---ADSDHE-GADAENSGDEDGKSDEEQNEENPN-AGWAE-------A 67

Query:   134 FKSILRKSVADDALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEK-GHVKPAN 192
                +L K   D     +L  +K+L  +K+ E+E + +++ + + ++  A E     KP  
Sbjct:    68 MAKVLGKKTPDTKPS-ILLKNKQL--DKIKEKEKKERLEKKKQLDKKRAWENICREKPDV 124

Query:   193 YLD-SHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPXXXXXXXXXXXXXXXTFFSELGK 251
               D  HE+ L  VAT+GVV+LFNA+    H QK +N                   S + K
Sbjct:   125 VQDREHERNLQRVATRGVVQLFNALKN--H-QKNVNERIKEVGGSERKKSK--ILSSVSK 179

Query:   252 TS-VSTADASAKGPNSSGTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQDSTVAADETGR 310
                +     +            E  +W+ L+D++M+ +S +KDWDK   +     +E  R
Sbjct:   180 KDFIDVLRGTDVAVKKEKEIKAEKSSWSVLKDDFMMGAS-MKDWDKERDEDGGGGEEDER 238

Query:   311 LSEEDGSSDDD 321
                ++ SS+ D
Sbjct:   239 EPAQEYSSESD 249

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q9Y3B9 RRP15 "RRP15-like protein" [Homo sapiens (taxid:9606)]

 Score = 164 (62.8 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 72/242 (29%), Positives = 107/242 (44%)

Query:    83 EVEGRGSSDTEREDGMDLD--VENEEFSDDEENGEIQP---GIANFAEGSRAFKMAFKSI 137
             E E   +SD+E   G + D    +++  + +  G+ +P      N  E S    M +   
Sbjct:    36 EDEATDTSDSEGSCGSEKDHFYSDDDAIEADSEGDAEPCDKENENDGESSVGTNMGWADA 95

Query:   138 LRKSV---ADDALGPVLSAHKKLVGEK--LAEEEAERKVKGEAKKERHLAAEKG-HVKPA 191
             + K +     ++   +L  +KKL  EK  L +E  E K+K   ++++ L  E    VKP 
Sbjct:    96 MAKVLNKKTPESKPTILVKNKKLEKEKEKLKQERLE-KIK---QRDKRLEWEMMCRVKPD 151

Query:   192 NYLDSH-EKFLIGVATKGVVKLFNAVNKAQ----HAQKGLNPXXXXXXXXXXXXXXXTFF 246
                D   E+ L  +AT+GVV+LFNAV K Q       K                    F 
Sbjct:   152 VVQDKETERNLQRIATRGVVQLFNAVQKHQKNVDEKVKEAGSSMRKRAKLISTVSKKDFI 211

Query:   247 SELGKTSVSTAD--ASAKGPNSSGTA--DGEGPAWAPLRDNYMLTSSKLKDWDKM---PQ 299
             S L     ST +  +S K P +  T     EGP W  LRD++M+ +S +KDWDK    P 
Sbjct:   212 SVLRGMDGSTNETASSRKKPKAKQTEVKSEEGPGWTILRDDFMMGAS-MKDWDKESDGPD 270

Query:   300 DS 301
             DS
Sbjct:   271 DS 272

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

SGD|S000006347 RRP15 "Nucleolar protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 126 (49.4 bits), Expect = 9.2e-06, P = 9.2e-06
 Identities = 59/206 (28%), Positives = 93/206 (45%)

Query:    38 GERVKINNKMRKLFRKRAR----AYNSDDDEDESAPE----FRGDSSLSVKNQEVEGRGS 89
             G + +++ K +K  RK A       NS + E  + PE      GD +   +        S
Sbjct:     2 GSKHRVDTKDKKRTRKNAEFGREKRNSGNQELSNEPEKDTIMEGDEAEEDEQNSSSDESS 61

Query:    90 S--DTEREDGMDLDVENEEFSDDEENGEIQPGIANFAEGSRAFKMAFKSILRKSV-ADDA 146
                D E+ D  + D E EE  DD+   + +   +   +GS  F  A  +IL   + A D 
Sbjct:    62 KIIDNEQSDAEEDDDEEEE--DDDFPRKKKSKNSKHDDGSTGFSAAVNAILSSHLKAYDR 119

Query:   147 LGPVLSAHKKLV----GEKL---AEEE--AERK-VKGEAKKERHLAAEKGHVKPANYLDS 196
               P+++ +KK++     EKL   A++   AE+K + G+A+K   +    G  +  N    
Sbjct:   120 KDPIMARNKKVLKQSESEKLEYKAKKALLAEKKKLLGKARKTDIIPIASGEDRSENIRKV 179

Query:   197 HEK--FLIGVATKGVVKLFNAVNKAQ 220
              EK   L  +A KG VKLFNA+   Q
Sbjct:   180 LEKETALRKIAQKGAVKLFNAILATQ 205

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0030687 "preribosome, large subunit precursor" evidence=IDA

GO:0005730 "nucleolus" evidence=IEA;IDA

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

CGD|CAL0000267 RRP15 [Candida albicans (taxid:5476)]

 Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 53/195 (27%), Positives = 89/195 (45%)

Query:    52 RKRARAYNSDDDEDESAPEFRGDSSLSVKNQEVEGRGSSDTEREDGMDLDV--------E 103
             +K A+    ++++D+S    +   S    + E+E   + D ++E G D +V        E
Sbjct:    23 KKTAKVVIEEEEQDQSNSSSQEVESEDESDSELEVADNDDLDQEIGSDDEVNIADASSSE 82

Query:   104 NEEFSDDEENGEIQ--PGIA-----NFAEGSRAFKMAFKSILRKSV-ADDALGPVLSAHK 155
               + S+DE   E +  P +      +  +GS +F  A  SI+   + A D   P+L A  
Sbjct:    83 GSDASEDENENEEEDFPKLKKRKTKSTEDGSESFADALNSIVNSKLKAYDRKDPIL-ARN 141

Query:   156 KLVGEKLAEEEAERKVKGEAKKERHLAAEKGHVK---PAN-------YLDSHEKFLIGVA 205
             K+  +KL  ++ E K K    +E+ +  +   VK   P +        +   EK L  VA
Sbjct:   142 KVTLKKLESDKLEMKAKRALLQEKKVLHDNARVKNLLPTSNEPEKVRQVIEKEKALKKVA 201

Query:   206 TKGVVKLFNAVNKAQ 220
              +GVV+LFNAV   Q
Sbjct:   202 QRGVVRLFNAVLSTQ 216

GO:0003674 "molecular_function" evidence=ND

GO:0005730 "nucleolus" evidence=IEA

GO:0005816 "spindle pole body" evidence=IEA

GO:0030687 "preribosome, large subunit precursor" evidence=IEA

GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XIV1078 hypothetical protein (307 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	321
pfam07890	132	pfam07890, Rrp15p, Rrp15p	7e-22

>gnl|CDD|219621 pfam07890, Rrp15p, Rrp15p

 Score = 89.0 bits (221), Expect = 7e-22
 Identities = 50/130 (38%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 129 AFKMAFKSILRKSVADDALG-PVLSAHKKLVG--EKLAEEEAERKVKGEAKKERHLAAEK 185
            F  AF  IL   +       P+LS  KKL+   +KL  E+ E+K K + + E+  A EK
Sbjct: 1   GFADAFAKILASKLPASKRKDPILSRSKKLLKAKKKLKSEKLEKKAKRQLRAEKRQALEK 60

Query: 186 GHVKP-ANYLDSHEKFLIGVATKGVVKLFNAVNKAQHAQKGLNPSRSKD-----EKLLKK 239
           G VKP        E+ L  VA KGVVKLFNAV  AQ   +       K      E+LLK+
Sbjct: 61  GRVKPVLPEDLEKERRLRKVAQKGVVKLFNAVRAAQKKTEKAVKEAGKKARVKREELLKE 120

Query: 240 RRKETFFSEL 249
             KE F   L
Sbjct: 121 VSKEKFLDLL 130

Rrp15p is required for the formation of 60S ribosomal subunits. Length = 132

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	321
PF07890	130	Rrp15p: Rrp15p; InterPro: IPR012459 This family co	100.0
KOG2974	241	consensus Uncharacterized conserved protein [Funct	99.87
KOG2974	241	consensus Uncharacterized conserved protein [Funct	96.26

>PF07890 Rrp15p: Rrp15p; InterPro: IPR012459 This family contains sequences from a number of hypothetical eukaryotic proteins of unknown function

Probab=100.00  E-value=2.2e-35  Score=250.42  Aligned_cols=123  Identities=44%  Similarity=0.535  Sum_probs=110.5

Q ss_pred             HHHHHHHHHHhcCCCCCCCCCccccchhhh--hhhhHHHHHHHhHhHHHHHHHHHHHhcCCCCCCc-ccchhhhhhHHHH
Q 020778          129 AFKMAFKSILRKSVADDALGPVLSAHKKLV--GEKLAEEEAERKVKGEAKKERHLAAEKGHVKPAN-YLDSHEKFLIGVA  205 (321)
Q Consensus       129 aFA~AmsKIL~kk~p~~~~~PILsksKk~~--~~kl~eeklE~KaKr~~k~EK~~~~ekgrvkP~~-~~~e~Er~LrkiA  205 (321)
                      |||+||++||++++|.+..+|||++++++.  .++++++++|.++++.++.+++++.++|||+|++ ...++||+||+||
T Consensus         1 g~a~a~~kIL~~~~~~~~~~pILsk~kk~~~~~~~~~~ek~e~k~~~~~~~ekk~~~~~~rvkp~~~~~~e~Er~LrkiA   80 (130)
T PF07890_consen    1 GFADAMSKILNKKLPKDKRTPILSKSKKLAKAKKKKKEEKLERKAKRELKKEKKEWEEKGRVKPDIPTDDERERRLRKIA   80 (130)
T ss_pred             ChHHHHHHHHcccCCCCCCcceeeCChhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCCcccHHHHHHHHHHH
Confidence            599999999999999876669999999986  3678889999999999999999999999999988 7889999999999


Q ss_pred             hhhHHHHhHHHHHHHHhhh----cCCCCchhhHHHHhhhcHHHHHHHhcC
Q 020778          206 TKGVVKLFNAVNKAQHAQK----GLNPSRSKDEKLLKKRRKETFFSELGK  251 (321)
Q Consensus       206 trGVVqLFNAV~k~Q~~~k----~~~~s~~KkeKvl~~vSK~~FLd~L~~  251 (321)
                      |||||||||||++||++..    +.+...++++++++++||..|||+|+.
T Consensus        81 trGVVqLFNAV~~~Q~~~~~~~~~~~~~~~~~~~~~~~~sK~~FLd~Lk~  130 (130)
T PF07890_consen   81 TRGVVQLFNAVRKAQKEAEKKLEEAGKLERKREKVLKSLSKESFLDMLKS  130 (130)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHhcCHHHHHHHHhC
Confidence            9999999999999999852    233456778899999999999999963

The region featured is approximately 150 amino acids long.

>KOG2974 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.87  E-value=4.9e-23  Score=190.78  Aligned_cols=167  Identities=22%  Similarity=0.255  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHhcCCCCCCCCCccccchhhhh-hhhHHHHHHHhHhHHHHHHHHHHHhcCCCCC-Ccc-----cchhhhhh
Q 020778          129 AFKMAFKSILRKSVADDALGPVLSAHKKLVG-EKLAEEEAERKVKGEAKKERHLAAEKGHVKP-ANY-----LDSHEKFL  201 (321)
Q Consensus       129 aFA~AmsKIL~kk~p~~~~~PILsksKk~~~-~kl~eeklE~KaKr~~k~EK~~~~ekgrvkP-~~~-----~~e~Er~L  201 (321)
                      +|++|+.+.|++..|.+.+..+++.+++... ..+.++.+..+..+..+-+   +.....+.| .++     ..++||.|
T Consensus        41 g~~da~~k~~~~~~~es~k~~~~~~~kkee~~d~~~~d~~~kk~~~~~~i~---~d~~~~~~~~dvt~~~s~d~e~er~l  117 (241)
T KOG2974|consen   41 GWADASEKVFNKDDPESSKIILKALNKKEEFDDSLSSDDEIKKKVKEKRIA---DDDAKILNQADVTQTDSHDKETERNL  117 (241)
T ss_pred             cccchhhhhhccCCchhhHHHHHHHhhhhhhhhhcchhhhhhhhhhhhhhH---HHhhccchhhhhhhhhhhhhhhhhHh
Confidence            4999999999999887655455555554321 1122222222222222222   222334444 332     45899999


Q ss_pred             HHHHhhhHHHHhHHHHHHHHhhh------cCCCCchhhHHHHhhhcHHHHHHHhcC---CC---CCcccccCCCC-C-CC
Q 020778          202 IGVATKGVVKLFNAVNKAQHAQK------GLNPSRSKDEKLLKKRRKETFFSELGK---TS---VSTADASAKGP-N-SS  267 (321)
Q Consensus       202 rkiAtrGVVqLFNAV~k~Q~~~k------~~~~s~~KkeKvl~~vSK~~FLd~L~~---~~---~~~~~~~~K~~-~-~~  267 (321)
                      ++|||||||||||||+++|+.++      .+..+..++..+++.++++.|++.|+.   ..   .....+..++. + ..
T Consensus       118 ~~vAtKgVvqlfNAvkk~qK~~k~~~~~Kea~~~k~Rr~~~i~~~s~k~~~d~~r~~lr~~~r~~~q~~~~~kk~~a~q~  197 (241)
T KOG2974|consen  118 RRVATKGVVQLFNAVKKDQKARKRRERLKEAMVGKVRRVVAINAESGKDRFDVKRSLLRGALRKVVQLANAVKKEVALQD  197 (241)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhhHHHHHhhhhhhhHHhhhhHHHHhhhhhhhhhhhhhhhhhhhhcc
Confidence            99999999999999999999754      344566667779999999999999974   21   11122223311 1 12


Q ss_pred             CCCCCCCCCcccccccccCCCCCCCCCCCCCC
Q 020778          268 GTADGEGPAWAPLRDNYMLTSSKLKDWDKMPQ  299 (321)
Q Consensus       268 ~~~~~e~~~WsVLrDDFMmg~aKmKDWDKe~d  299 (321)
                      ....+++|+|..||++||++ .+||+||+++.
T Consensus       198 ~~~ee~~~~g~~~rn~~~~~-~kikewdKe~~  228 (241)
T KOG2974|consen  198 DDNEEEGSGGRELRNDFEKN-QKIKEWDKESF  228 (241)
T ss_pred             ccccccccchhhhhhHHhhh-hhhcccchhhc
Confidence            33457899999999999998 89999999999

>KOG2974 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.26  E-value=0.0041  Score=58.99  Aligned_cols=104  Identities=16%  Similarity=0.114  Sum_probs=58.1

Q ss_pred             CCCCccccchhhhhhhhHHHHHHHhHhHHHHHHHHHHHhcCC---CCCCcc---cchhhhhhHHHHhhhHHHHhHHHH-H
Q 020778          146 ALGPVLSAHKKLVGEKLAEEEAERKVKGEAKKERHLAAEKGH---VKPANY---LDSHEKFLIGVATKGVVKLFNAVN-K  218 (321)
Q Consensus       146 ~~~PILsksKk~~~~kl~eeklE~KaKr~~k~EK~~~~ekgr---vkP~~~---~~e~Er~LrkiAtrGVVqLFNAV~-k  218 (321)
                      +.-|+.+ +|.. .+.-..++.++|++....+.|..+.-+-|   +.|...   .....|.|+++|-|+|++|||||+ .
T Consensus       115 r~l~~vA-tKgV-vqlfNAvkk~qK~~k~~~~~Kea~~~k~Rr~~~i~~~s~k~~~d~~r~~lr~~~r~~~q~~~~~kk~  192 (241)
T KOG2974|consen  115 RNLRRVA-TKGV-VQLFNAVKKDQKARKRRERLKEAMVGKVRRVVAINAESGKDRFDVKRSLLRGALRKVVQLANAVKKE  192 (241)
T ss_pred             hHhHHHH-hHHH-HHHHHHHHHHHHHHhHHHHHHHhhhhhhHHHHHhhhhhhhHHhhhhHHHHhhhhhhhhhhhhhhhhh
Confidence            3335555 4433 34444555566665533333333321111   223332   246888888999999999999999 3


Q ss_pred             HHHhh---hcCC-CCchhh-----HHHHhhhcHHHHHHHhcC
Q 020778          219 AQHAQ---KGLN-PSRSKD-----EKLLKKRRKETFFSELGK  251 (321)
Q Consensus       219 ~Q~~~---k~~~-~s~~Kk-----eKvl~~vSK~~FLd~L~~  251 (321)
                      .|.+.   .... +....+     .+.|+.++|+.||++...
T Consensus       193 ~a~q~~~~ee~~~~g~~~rn~~~~~~kikewdKe~~~d~~~~  234 (241)
T KOG2974|consen  193 VALQDDDNEEEGSGGRELRNDFEKNQKIKEWDKESFLDLGKS  234 (241)
T ss_pred             hhhccccccccccchhhhhhHHhhhhhhcccchhhccccccc
Confidence            33332   1111 111111     235799999999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00