Citrus Sinensis ID: 020825

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
Protein Sequence
MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA
Secondary Structure (PSIPRED)
cccccccEEEEEccccccccccccccHHHHHHHccccEEEccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHccccHHHHHcccccccccccccccEEEEHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEEEccHHHcccccccEEEccccccccccccccccccEEEccccccccccccccEEEEEEccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccHHHcccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHcHHHHHcccccccccccccccccccccHHHHHHcccEEEHcccccHHHHHHHcccEEEEHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHcccccHHHcEEEEEEEEEcccccccccccEEEEcccccccHHHHHcccccccccccccccccccccccHHHHHHHHcHHHHHccccccHHHHHHcccccEEEHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MADKPSKALVLYGDGlarfvepshahlHSLASKAAcgflslpiappseseeERIVREFAVLIDANQDYLSGIGEhttelkweekspfqtISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIetsdslsgspIDVVASELLKLLGlqrgkmeevsQFDLVLVHIgagektnddkgkaVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIdekssdlsalfprqsytmkgetprndvrhhcpmlISQWQYAVTRKdmaetfsfkdfkehggyltipadRFLHEVAFKLwkapkyga
Flexible Loop (DISEMBL)
MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEhttelkweekSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIEtsdslsgspIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAgektnddkgkAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIdekssdlsalfPRQSytmkgetprndvrhHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLwkapkyga
Low Complexity Region (SEG)
MADKPSKALVLYGDGLARFVEPshahlhslaskaaCGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA
Disordered region (IsUnstruct)
********LVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPI*********RIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISID************************DVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKA*****
Disordered Region (DISOPRED)
****PSK*LVLYGDGLARFVEPSHAHLHSLASKAACGFL*****************EFAVLIDANQDYLSG**************PFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELI*************VASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKT*******VAHDLEYINALVRVIL*********GSRLHLSVVLSYGQVLEA*********************FPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYG*
Disordered Region (DISEMBL)
MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA
Disordered Region (DISPRO)
****PSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAP***SEEERIVREFAVLIDANQDYLSGIG*HTTELKW*EKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYG*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
225429560	320	PREDICTED: uncharacterized protein LOC10	0.996	1.0	0.644	1e-120
224092198	309	predicted protein [Populus trichocarpa]	0.962	1.0	0.660	1e-117
255550804	313	conserved hypothetical protein [Ricinus	0.975	1.0	0.610	1e-107
356564061	308	PREDICTED: uncharacterized protein LOC10	0.959	1.0	0.610	1e-107
255647370	308	unknown [Glycine max]	0.959	1.0	0.607	1e-106
449450351	315	PREDICTED: uncharacterized protein LOC10	0.981	1.0	0.591	1e-106
449494427	315	PREDICTED: uncharacterized LOC101217985	0.981	1.0	0.588	1e-106
356552344	307	PREDICTED: uncharacterized protein LOC10	0.956	1.0	0.607	1e-105
388507454	304	unknown [Lotus japonicus]	0.943	0.996	0.590	1e-97
357437483	306	hypothetical protein MTR_1g016410 [Medic	0.934	0.980	0.550	5e-93

>gi|225429560|ref|XP_002279873.1| PREDICTED: uncharacterized protein LOC100255893 [Vitis vinifera] gi|296081666|emb|CBI20671.3| unnamed protein product [Vitis vinifera]

 Score =  436 bits (1122), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/321 (64%), Positives = 256/321 (79%), Gaps = 1/321 (0%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS+ LVLYGDGLARF+ PSH HLH LAS+  CGFLSL  +PPSE+E+ERIVREFA 
Sbjct: 1   MADKPSRGLVLYGDGLARFINPSHTHLHDLASRGICGFLSLSNSPPSETEDERIVREFAQ 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+D+ +  L       T L+ ++KS   TIS+RFMG++AA++  NS L SFG  LGF  +
Sbjct: 61  LLDSCEASLGVNVGGATNLECQQKSLMPTISERFMGMRAAIVANNSSLTSFGGTLGFTVM 120

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           Q +ELI+ +  LS  P+DVVASE LKLLG Q GK  E SQFDL+ +HIGAGEK N  + +
Sbjct: 121 QTDELIKNNHPLSEPPVDVVASESLKLLGFQEGKTLETSQFDLIFMHIGAGEKANG-QTE 179

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            +A+D+EYIN LV  I+Q A+P +E+GSRLHLS+V+SYG V + D+ +LSVL++ +E +S
Sbjct: 180 IIANDVEYINGLVGRIMQTAEPGSEIGSRLHLSLVMSYGAVSKDDDPSLSVLVTKNENNS 239

Query: 241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTI 300
           DLS+L PRQSYTMKG  PR+++RHHCPMLI+QWQYAVTRKDMA+TFSF+DFKEHGG LTI
Sbjct: 240 DLSSLSPRQSYTMKGGNPRDNIRHHCPMLIAQWQYAVTRKDMAKTFSFEDFKEHGGNLTI 299

Query: 301 PADRFLHEVAFKLWKAPKYGA 321
           PADRFLHEVAFKLWKAPKYGA
Sbjct: 300 PADRFLHEVAFKLWKAPKYGA 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092198|ref|XP_002309505.1| predicted protein [Populus trichocarpa] gi|222855481|gb|EEE93028.1| predicted protein [Populus trichocarpa]

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/321 (66%), Positives = 241/321 (75%), Gaps = 12/321 (3%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADK S+ LV+YGDGLA F+ PSHAHLHSLASKA CGFL+LP APPSESE+ERIVREFA 
Sbjct: 1   MADKASRGLVIYGDGLASFINPSHAHLHSLASKAFCGFLTLPNAPPSESEDERIVREFAY 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA + Y                +   TIS+RFMG+KAA+IT N  LKSFG KLG    
Sbjct: 61  LLDACEAY------------QNVSTSIPTISERFMGMKAAIITNNPGLKSFGGKLGLTVF 108

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
             N+L     SLSGS  D V  ELLKLLG Q GK  E SQFDLV VH+GAGE+ N +  K
Sbjct: 109 PFNDLKGNEFSLSGSSTDFVTFELLKLLGFQEGKTLETSQFDLVFVHVGAGERVNAEGHK 168

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            +A D+EYI+ALV  I+++AQP +E+GSRLHLS+V+SYG V E D  +LS+L S DE   
Sbjct: 169 TIAIDVEYIDALVDGIMRIAQPGSEIGSRLHLSLVMSYGYVTEGDGRDLSILTSKDEMDP 228

Query: 241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTI 300
            LS LFP QSYTMKGE PRND+R+HCPMLISQWQYAVTR DMAETFSFKDFKEHGG L I
Sbjct: 229 ALSKLFPLQSYTMKGEKPRNDIRYHCPMLISQWQYAVTRVDMAETFSFKDFKEHGGNLVI 288

Query: 301 PADRFLHEVAFKLWKAPKYGA 321
           PADRFLHEVAFKLWKAPKYGA
Sbjct: 289 PADRFLHEVAFKLWKAPKYGA 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550804|ref|XP_002516450.1| conserved hypothetical protein [Ricinus communis] gi|223544270|gb|EEF45791.1| conserved hypothetical protein [Ricinus communis]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 237/321 (73%), Gaps = 8/321 (2%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS+ALVLYGDGLA+ ++ SH H+HSLASKA+CGFLSLP AP SESE ERIVREFA 
Sbjct: 1   MADKPSRALVLYGDGLAQLIDESHTHIHSLASKASCGFLSLPNAPSSESENERIVREFAH 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA   Y         E+  E+ +   TIS RFM +KAA+IT N  L+SFG KLGF  L
Sbjct: 61  LVDAYDAY--------QEMSNEKCTLIPTISQRFMEMKAAIITDNPSLQSFGSKLGFTVL 112

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
               L  T  S   S  + + SELLKLLG Q GK  E SQFDLV++H GA E  N D  +
Sbjct: 113 SFKCLNGTHKSHYESSFEDLTSELLKLLGFQEGKTIEASQFDLVILHTGASELLNSDSSE 172

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
           A   D  Y+N++V+  +  A+P +E+GSRLHLS+V+SYG   + D++NLSVL+S DE +S
Sbjct: 173 ATECDAHYLNSMVKETMYNAKPGSEIGSRLHLSLVMSYGNASKIDSTNLSVLVSKDEMNS 232

Query: 241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTI 300
           DLS L PRQSYTMKGE  R++VRHHCPMLI+QWQ+AVTRKD AET+S+K+FKEHG  L I
Sbjct: 233 DLSVLVPRQSYTMKGEKLRDNVRHHCPMLIAQWQHAVTRKDTAETYSYKEFKEHGVNLVI 292

Query: 301 PADRFLHEVAFKLWKAPKYGA 321
           PADRF+HEVAFKLWKAPKYGA
Sbjct: 293 PADRFIHEVAFKLWKAPKYGA 313

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564061|ref|XP_003550275.1| PREDICTED: uncharacterized protein LOC100780200 [Glycine max]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/321 (61%), Positives = 242/321 (75%), Gaps = 13/321 (4%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS++LVL+GDGLAR ++ SH+H HSLAS ++CGFLSLP +PPSESE+ER VREFAV
Sbjct: 1   MADKPSRSLVLFGDGLARSIDSSHSHFHSLASLSSCGFLSLPNSPPSESEDERTVREFAV 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA   Y S +    ++   +E  P QT+ DRF+G+KAA++T NS LKSF  KLGF+ L
Sbjct: 61  LLDACHTY-SNMKGQISDRDNQEDPPKQTLPDRFIGMKAAILTNNSSLKSFSAKLGFSVL 119

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL+       G   +VVA ELLK LG + GK+ +   FDLV  HIGAGE+      K
Sbjct: 120 KLDELV------GGGSAEVVALELLKFLGFKEGKVLDSDHFDLVFFHIGAGEQ------K 167

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            VA D+ Y++ALV  ++  AQP +++ SRLHLSVV+SYG VLEAD+S  SVL  +DEK+S
Sbjct: 168 VVAADVGYMDALVGGVMSQAQPGSDISSRLHLSVVMSYGNVLEADDSKFSVLKRVDEKNS 227

Query: 241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTI 300
            LS L+P QSYTMKG  PR DVRH+ PMLI+QWQ AVTRKD AE FSF+DF EHGG LTI
Sbjct: 228 HLSMLYPLQSYTMKGGIPRKDVRHYSPMLIAQWQSAVTRKDNAERFSFEDFMEHGGNLTI 287

Query: 301 PADRFLHEVAFKLWKAPKYGA 321
           PADRFLHE+AFKLWKAPKYGA
Sbjct: 288 PADRFLHEIAFKLWKAPKYGA 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647370|gb|ACU24151.1| unknown [Glycine max]

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/321 (60%), Positives = 242/321 (75%), Gaps = 13/321 (4%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS++LVL+GDGLAR ++ SH+H HSLAS ++CGFLSLP +PPSESE+ER VREFAV
Sbjct: 1   MADKPSRSLVLFGDGLARSIDSSHSHFHSLASLSSCGFLSLPNSPPSESEDERTVREFAV 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA   Y S +    ++   +E  P QT+ DRF+G+KAA++T NS LKSF  KLGF+ L
Sbjct: 61  LLDACHTY-SNMKGQISDRDNQEDPPKQTLPDRFIGMKAAILTNNSSLKSFSAKLGFSVL 119

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL+       G   +VVA ELLK LG + GK+ +   FDLV  HIGAGE+      K
Sbjct: 120 KLDELV------GGGSAEVVALELLKFLGFKEGKVLDSDHFDLVFFHIGAGEQ------K 167

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            VA D+ Y++ALV  ++  AQP +++ SRLHLSVV+SYG VLEAD+   SVL  +DEK+S
Sbjct: 168 VVAADVGYMDALVGGVMSQAQPGSDISSRLHLSVVMSYGNVLEADDFKFSVLKRVDEKNS 227

Query: 241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTI 300
            LS L+P QSYTMKG  PR DVRH+ PMLI+QWQ+AVTRKD AE FSF+DF EHGG LTI
Sbjct: 228 HLSMLYPLQSYTMKGGIPRKDVRHYSPMLIAQWQFAVTRKDNAERFSFEDFMEHGGNLTI 287

Query: 301 PADRFLHEVAFKLWKAPKYGA 321
           PADRFLHE+AFKLWKAPKYGA
Sbjct: 288 PADRFLHEIAFKLWKAPKYGA 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450351|ref|XP_004142926.1| PREDICTED: uncharacterized protein LOC101217985 [Cucumis sativus]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/321 (59%), Positives = 247/321 (76%), Gaps = 6/321 (1%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS+AL ++GDGLARF++ SH++LH+LAS A+CGFLSLP APPSESEE+R++RE  +
Sbjct: 1   MADKPSRALAVFGDGLARFLDHSHSNLHALASLASCGFLSLPNAPPSESEEKRMIRELEL 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L DA+   +S  G        E  S  ++I +RFMG++AAL+T NS ++S G +LG + L
Sbjct: 61  LFDASDSDVSKNGGGC-----EGSSQKKSIPERFMGMRAALLTNNSVVQSLGSELGISLL 115

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL++  + L   P+D +ASELLK LG Q GK+++ S+FDL+ VHIG G+K N +K +
Sbjct: 116 RLDELMQM-NHLGLPPVDFLASELLKRLGFQDGKIQDASEFDLLFVHIGVGDKVNGEKDR 174

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
             + +++YI+ALV  ILQ  QP +E+GSRLHLS+++SYG V E D ++LSVL S   K+S
Sbjct: 175 TASDEMKYIDALVGDILQKTQPGSEIGSRLHLSLLMSYGDVFEDDENSLSVLTSNCGKNS 234

Query: 241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTI 300
           DLS LFPRQSYTM GE  RND+RHH PML +QWQY VTRKD AETFSFK+FKEHG  L I
Sbjct: 235 DLSVLFPRQSYTMMGEVQRNDIRHHSPMLAAQWQYGVTRKDKAETFSFKEFKEHGSNLVI 294

Query: 301 PADRFLHEVAFKLWKAPKYGA 321
           PADRF+HEVAFKLWKAPKYGA
Sbjct: 295 PADRFIHEVAFKLWKAPKYGA 315

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494427|ref|XP_004159543.1| PREDICTED: uncharacterized LOC101217985 [Cucumis sativus]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/321 (58%), Positives = 247/321 (76%), Gaps = 6/321 (1%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS+AL ++GDGLARF++ SH++LH+LAS A+CGFLSLP APPSESEE+R++RE  +
Sbjct: 1   MADKPSRALAVFGDGLARFLDQSHSNLHALASLASCGFLSLPNAPPSESEEKRMIRELEL 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L DA+   ++  G        E  S  ++I +RFMG++AAL+T NS ++S G +LG + L
Sbjct: 61  LFDASDSDVNKNGGGC-----EGSSQKKSIPERFMGMRAALLTNNSVVQSLGSELGISLL 115

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL++  + L   P+D +ASELLK LG Q GK+++ S+FDL+ VHIG G+K N +K +
Sbjct: 116 RLDELMQM-NHLGLPPVDFLASELLKRLGFQDGKIQDASEFDLLFVHIGVGDKVNGEKDR 174

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
             + +++YI+ALV  ILQ  QP +E+GSRLHLS+++SYG V E D ++LSVL S   K+S
Sbjct: 175 TASDEMKYIDALVGDILQKTQPGSEIGSRLHLSLLMSYGDVFEDDENSLSVLTSNCGKNS 234

Query: 241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTI 300
           DLS LFPRQSYTM GE  RND+RHH PML +QWQY VTRKD AETFSFK+FKEHG  L I
Sbjct: 235 DLSVLFPRQSYTMMGEVQRNDIRHHSPMLAAQWQYGVTRKDKAETFSFKEFKEHGSNLVI 294

Query: 301 PADRFLHEVAFKLWKAPKYGA 321
           PADRF+HEVAFKLWKAPKYGA
Sbjct: 295 PADRFIHEVAFKLWKAPKYGA 315

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552344|ref|XP_003544528.1| PREDICTED: uncharacterized protein LOC100817041 [Glycine max]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/321 (60%), Positives = 242/321 (75%), Gaps = 14/321 (4%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS++LVL+GDGLARF++ SH+H HSLAS ++CGFLSLP +PPSESE+ER VRE AV
Sbjct: 1   MADKPSRSLVLFGDGLARFIDSSHSHFHSLASLSSCGFLSLPNSPPSESEDERTVREVAV 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATL 120
           L+DA   YL+ +G+  ++   +E SP QT+ DRFMG+KAA++T NS LKSF  KLGF+ L
Sbjct: 61  LLDACPIYLN-MGK-ISDSDNQEDSPKQTLPDRFMGMKAAILTNNSSLKSFSAKLGFSVL 118

Query: 121 QLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK 180
           +L+EL+       G   +VVA ELLKLLG Q GK+ +   FDLV  H GAGE+      K
Sbjct: 119 KLDELV------VGGSAEVVALELLKLLGFQEGKVLDSDHFDLVFFHNGAGEQ------K 166

Query: 181 AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS 240
            VA D+ Y++ALV  ++   QP +++ SRLHLSVV+SYG +LE D+S  SV   +DEK+S
Sbjct: 167 VVAADMGYMDALVGGVMSQMQPGSDISSRLHLSVVVSYGNILEGDDSKFSVSKRVDEKNS 226

Query: 241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTI 300
            LS L+P QSY MKG  PR DVRH+ PMLI+QWQ AVTRKD AE FSF+DF EHGG LTI
Sbjct: 227 HLSVLYPLQSYAMKGGIPRKDVRHYSPMLIAQWQSAVTRKDNAERFSFEDFMEHGGNLTI 286

Query: 301 PADRFLHEVAFKLWKAPKYGA 321
           PADRFLHE+AFKLWKAPKYGA
Sbjct: 287 PADRFLHEIAFKLWKAPKYGA 307

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507454|gb|AFK41793.1| unknown [Lotus japonicus]

 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 190/322 (59%), Positives = 234/322 (72%), Gaps = 19/322 (5%)

Query: 1   MADKPSKALVLYGDGLARFVEPSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAV 60
           MADKPS++LVL+GDGLAR ++PSH+HLHSLAS ++CGFLSLP +PPSESE++R VREFAV
Sbjct: 1   MADKPSRSLVLFGDGLARSIDPSHSHLHSLASLSSCGFLSLPNSPPSESEDQRTVREFAV 60

Query: 61  LIDANQDYLSGIGEHTTELKWEEKSP-FQTISDRFMGLKAALITTNSRLKSFGDKLGFAT 119
           L+DA       +    ++   ++ SP  QT+ DRFMG+KAA++T +S LKSF  KLGF  
Sbjct: 61  LLDA-----PNVNVQVSDDDSQKDSPEKQTLPDRFMGMKAAILTNHSGLKSFSSKLGFNV 115

Query: 120 LQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG 179
           LQL+ L +  D+      DVVA ELLKLLG Q GK+++ + FDLV  HIGAGEK      
Sbjct: 116 LQLDALAKDYDA-GLHENDVVALELLKLLGFQEGKVQDSNNFDLVFFHIGAGEK------ 168

Query: 180 KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKS 239
                ++EYINALV  ++  AQP +++ SRLHLS+V+SYG+V E D S  SV    DEKS
Sbjct: 169 -----NVEYINALVGGLMNQAQPGSDISSRLHLSLVMSYGKVSEDDESKFSVSKRADEKS 223

Query: 240 SDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLT 299
             LS L+P QSY MKG  PR DVR H P+LI+QWQ AVT KD AE F F+DF EHGG LT
Sbjct: 224 Y-LSLLYPLQSYAMKGGFPRKDVRLHSPLLIAQWQDAVTHKDNAERFYFQDFMEHGGNLT 282

Query: 300 IPADRFLHEVAFKLWKAPKYGA 321
           IPADRFLHE+AFKLWKAPKYGA
Sbjct: 283 IPADRFLHEIAFKLWKAPKYGA 304

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437483|ref|XP_003589017.1| hypothetical protein MTR_1g016410 [Medicago truncatula] gi|355478065|gb|AES59268.1| hypothetical protein MTR_1g016410 [Medicago truncatula] gi|388492878|gb|AFK34505.1| unknown [Medicago truncatula]

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 180/327 (55%), Positives = 237/327 (72%), Gaps = 27/327 (8%)

Query: 1   MADKPSKALVLYGDGLARFVEPS--HAHLHSLASKAACGFLSLPIAPPS----ESEEERI 54
           MADKPS++L+LYGDGLARF++PS  H +LHSLAS ++C FL+L  +  +    E+E++RI
Sbjct: 1   MADKPSRSLILYGDGLARFIDPSSSHTNLHSLASLSSCAFLTLSNSNSNFNPSETEDDRI 60

Query: 55  VREFAVLIDANQDYLSGIGEHTTELKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDK 114
           VREF +L+DA+Q +             +E    QT+ DRFMG+KAA++T +S LKSF  K
Sbjct: 61  VREFTLLLDASQIH-------------DE----QTLPDRFMGMKAAIMTNHSGLKSFSTK 103

Query: 115 LGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKT 174
           LGF+ +QL+ L++   S S    D+VA E+LKLLG Q GK+ + SQFDLV +H+GAGEK 
Sbjct: 104 LGFSVVQLDGLVKQHASESQDS-DIVAVEILKLLGFQEGKVLDNSQFDLVFIHVGAGEKD 162

Query: 175 NDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLIS 234
           N  +  A   D+E+++ALV  I++ AQP ++VGSRLHLSVV+SYG+VLE D S  SV   
Sbjct: 163 NGSEQNA---DVEFVDALVGAIMRQAQPGSDVGSRLHLSVVMSYGKVLEDDESKFSVSKK 219

Query: 235 IDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEH 294
           +DEK S    L+P QSY MKG  PR DVR H PMLI+Q Q+AVTRKD  + F+F+DF ++
Sbjct: 220 VDEKDSCFLTLYPLQSYAMKGGVPRKDVRLHSPMLIAQLQHAVTRKDNVQRFTFQDFMKN 279

Query: 295 GGYLTIPADRFLHEVAFKLWKAPKYGA 321
           GG LTIPADRFLHE+AFK+WKAPKYGA
Sbjct: 280 GGNLTIPADRFLHEIAFKMWKAPKYGA 306

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	321
TAIR|locus:2181940	306	AT5G11810 "AT5G11810" [Arabido	0.950	0.996	0.506	5e-76

TAIR|locus:2181940 AT5G11810 "AT5G11810" [Arabidopsis thaliana (taxid:3702)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 163/322 (50%), Positives = 215/322 (66%)

Query:     1 MADKPSKALVLYGDGLARFVEPXXXXXXXXXXXXXCGFLSLPIAPPSESEEERIVREFAV 60
             MADK S++L+LYGDGLARFV+P             CGFLSLP APP E+E ERIVREF+ 
Sbjct:     1 MADKSSRSLILYGDGLARFVDPSNTNIHSLASVATCGFLSLPNAPP-ETENERIVREFSH 59

Query:    61 LIDANQDYLSGIGEHTTELKWEEK-SPFQTISDRFMGLKAALITTNSRLKSFGDKLGFAT 119
             L+DA++ Y    G     LK +   +   T+++RFMGLKAAL+T +S L SFG  +G   
Sbjct:    60 LLDASEAYSIASG-----LKPKGNGNDISTLAERFMGLKAALVTDSSTLTSFGKLIGLDV 114

Query:   120 LQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG 179
             LQL+E+ + SDS    P D  +S+LLKLLG + GK  +V+ +DLV VH G  E  N    
Sbjct:   115 LQLSEICQESDSF---PSDATSSKLLKLLGFEGGKCLDVNLYDLVFVHFGVDEYNN---- 167

Query:   180 KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKS 239
                 +++  +++L+  I+ MAQP +E+ SRLHLSVVLSYG V + D S   +    ++ +
Sbjct:   168 ---GNNMGILDSLIGSIMGMAQPGSEILSRLHLSVVLSYGSVTDKDVSVFPIKTPQEDIN 224

Query:   240 SDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLT 299
                  L PRQSYTM+GE  R+DVRH+CPML++QWQ+ VTRKD+ +T SF+  K+  G L 
Sbjct:   225 PAFIGLVPRQSYTMRGEKTRDDVRHYCPMLVAQWQHGVTRKDLVDTLSFEALKKLCGNLV 284

Query:   300 IPADRFLHEVAFKLWKAPKYGA 321
             IPADRF+HEVAFKLWKAPKYGA
Sbjct:   285 IPADRFIHEVAFKLWKAPKYGA 306


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      321       308   0.00078  116 3  11 22  0.41    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  206 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.63u 0.18s 25.81t   Elapsed:  00:00:01
  Total cpu time:  25.63u 0.18s 25.81t   Elapsed:  00:00:01
  Start:  Fri May 10 10:34:59 2013   End:  Fri May 10 10:35:00 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	321
COG3635	408	Predicted phosphoglycerate mutase, AP superfamily	100.0
PRK04135	395	cofactor-independent phosphoglycerate mutase; Prov	100.0
PRK04024	412	cofactor-independent phosphoglycerate mutase; Prov	100.0
PRK04200	395	cofactor-independent phosphoglycerate mutase; Prov	100.0
TIGR02535	396	hyp_Hser_kinase proposed homoserine kinase. The pr	100.0
TIGR00306	396	apgM 2,3-bisphosphoglycerate-independent phosphogl	100.0
PF01676	252	Metalloenzyme: Metalloenzyme superfamily; InterPro	99.88
PRK12383	406	putative mutase; Provisional	99.4
TIGR01696	381	deoB phosphopentomutase. This protein is involved	98.83
PRK05434	507	phosphoglyceromutase; Provisional	98.76
PLN02538	558	2,3-bisphosphoglycerate-independent phosphoglycera	98.57
PRK05362	394	phosphopentomutase; Provisional	98.33
TIGR01307	501	pgm_bpd_ind 2,3-bisphosphoglycerate-independent ph	97.54
cd00016	384	alkPPc Alkaline phosphatase homologues; alkaline p	97.09
COG1015	397	DeoB Phosphopentomutase [Carbohydrate transport an	96.36
KOG4513	531	consensus Phosphoglycerate mutase [Carbohydrate tr	94.18
COG0696	509	GpmI Phosphoglyceromutase [Carbohydrate transport	92.61
PF01663	365	Phosphodiest: Type I phosphodiesterase / nucleotid	91.06
PRK04135	395	cofactor-independent phosphoglycerate mutase; Prov	80.77

>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.4e-43  Score=342.34  Aligned_cols=173  Identities=17%  Similarity=0.249  Sum_probs=156.6

Q ss_pred             cccCCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccC
Q 020825           80 KWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVS  159 (321)
Q Consensus        80 ~~~~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~  159 (321)
                      .-...|.+|+|+||| |||||||++++++||+|+++|||||++||+||+.||    +|++++++++++|          +
T Consensus       231 gag~~P~ip~F~e~y-glk~a~Ia~~~l~KGlar~~GmDvi~vegatG~~dt----n~~~k~k~a~eal----------~  295 (408)
T COG3635         231 GAGRYPKIPSFQERY-GLKGACIAAVPLIKGLARLVGMDVIEVEGATGYIDT----NYRGKAKAAIEAL----------K  295 (408)
T ss_pred             CCCCCCCCCCHhHhh-CcceEEEEecHHHHhHHHHhCCceeecccccCccCc----cHHHHHHHHHHHH----------h
Confidence            345689999999999 999999999999999999999999999999999997    9999999999999          9


Q ss_pred             cccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhccccc
Q 020825          160 QFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEK  238 (321)
Q Consensus       160 ~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~  238 (321)
                      +|||||||++++|+++|+|+ ++|+++||+||++++++++ +...      ..+++|++                     
T Consensus       296 ~yDfv~vhik~tDeagHdG~~e~Kv~~IE~iD~~i~pll~-~~~~------~~~i~vt~---------------------  347 (408)
T COG3635         296 EYDFVFVHIKATDEAGHDGDFEGKVRVIEDIDKAIGPLLD-LDLD------EDVIAVTG---------------------  347 (408)
T ss_pred             hCCEEEEEeccCccccCCCCHHHhHHHHHHHHHHhhhhhc-cccC------CcEEEEeC---------------------
Confidence            99999999999999999999 9999999999999999987 3221      25778885                     


Q ss_pred             CcccccccCCcccccCCCCCC----CCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHhc
Q 020825          239 SSDLSALFPRQSYTMKGETPR----NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  314 (321)
Q Consensus       239 p~~~~~l~P~QSY~~kdh~tp----~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL~  314 (321)
                                      ||+||    +|++||||++|  |.. .+|+|+|+.|+|.+|++ |++|+|+|.++|++++.+++
T Consensus       348 ----------------DHsTPv~vk~Hs~dPVPili--~~~-~v~~D~v~~F~E~~~~~-G~Lgri~g~dlm~ill~~~~  407 (408)
T COG3635         348 ----------------DHSTPVSVKDHSGDPVPILI--YGP-YVRRDDVKRFDEFSCAR-GSLGRIRGSDLMPILLDLAG  407 (408)
T ss_pred             ----------------CCCCcccccccCCCCccEEE--ecC-CcccCccceecHhhhhc-CCcceeehHHHHHHHHHhhc
Confidence                            56666    56699999999  666 44999999999999877 99999999999999999987


Q ss_pred             C
Q 020825          315 K  315 (321)
Q Consensus       315 k  315 (321)
                      |
T Consensus       408 r  408 (408)
T COG3635         408 R  408 (408)
T ss_pred             C
Confidence            6

>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional

Probab=100.00  E-value=1.5e-37  Score=306.22  Aligned_cols=171  Identities=20%  Similarity=0.366  Sum_probs=154.4

Q ss_pred             ccccCCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCccccc
Q 020825           79 LKWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEV  158 (321)
Q Consensus        79 ~~~~~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~  158 (321)
                      +.....|.+|+|+||| |||||+||+++++||||+++||+||. +|+          +|.+++++++++|          
T Consensus       220 rg~G~~p~lp~F~e~~-Glkga~Ia~~~l~kGi~~~~Gm~~i~-~ga----------~~~~k~~~a~~~l----------  277 (395)
T PRK04135        220 RGFSKKPDFPSFEEVY-KLKAAAIASYPMYRGLAKLVGMDVLP-TGQ----------TLEDEIKTLKENW----------  277 (395)
T ss_pred             cCCCCCCCCCCHHHHh-CCceEEEehhHHHHHHHHHcCCeecC-CCC----------CHHHHHHHHHHHH----------
Confidence            3446789999999999 99999999999999999999999999 885          8999999999999          


Q ss_pred             CcccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccc
Q 020825          159 SQFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDE  237 (321)
Q Consensus       159 ~~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~  237 (321)
                      ++|||||||++++|+++|+|+ ++|+++||+||+.+..++ .+++        .+++|+|                    
T Consensus       278 ~~~DfV~vhvk~~DeaGH~gd~~~Kv~~IE~iD~~l~~ll-~l~~--------~~ivVT~--------------------  328 (395)
T PRK04135        278 NDYDFFFLHVKKTDSYGEDGNFEEKVKVIEEVDALLPEIL-ALKP--------DVLVITG--------------------  328 (395)
T ss_pred             hcCCEEEEEeccCchhhccCCHHHHHHHHHHHHHHHHHHh-cCCC--------cEEEEeC--------------------
Confidence            889999999999999999999 889999999999877888 4321        2677886                    


Q ss_pred             cCcccccccCCcccccCCCCCC----CCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHh
Q 020825          238 KSSDLSALFPRQSYTMKGETPR----NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKL  313 (321)
Q Consensus       238 ~p~~~~~l~P~QSY~~kdh~tp----~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL  313 (321)
                                       ||.||    +|+++|||++|++.   ..|+|.+++|+|.++.+ ||+++++|.++|+.++.++
T Consensus       329 -----------------DH~TP~~~~~Hs~dPVP~li~g~---~~~~D~v~~F~E~~~~~-G~L~~~~G~~lm~~~l~~~  387 (395)
T PRK04135        329 -----------------DHSTPAVLKGHSWHPVPLLLYSK---YCRPDLSQRFTERECAR-GGLGHIPAVDLMPLALAHA  387 (395)
T ss_pred             -----------------CCCCcccccccCCCCEeEEEEcC---CCCCCCCCccCHHHHcC-CCcCcccHHHHHHHHHHhh
Confidence                             66676    68899999999444   66889999999999777 9999999999999999999


Q ss_pred             cCCcCCCC
Q 020825          314 WKAPKYGA  321 (321)
Q Consensus       314 ~kapKYGA  321 (321)
                      +|+.||||
T Consensus       388 ~~~~~~G~  395 (395)
T PRK04135        388 LRLEKYGA  395 (395)
T ss_pred             hhHhhcCC
Confidence            99999997

>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional

Probab=100.00  E-value=1.6e-36  Score=300.33  Aligned_cols=180  Identities=21%  Similarity=0.283  Sum_probs=162.0

Q ss_pred             cccCCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccC
Q 020825           80 KWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVS  159 (321)
Q Consensus        80 ~~~~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~  159 (321)
                      .....|.+|+|.||| |||+|+|+++++++|+|+++||+|+.+||+||+.+|    ||.+|+++++++|          +
T Consensus       228 G~G~~p~lp~f~er~-gl~ga~is~~~l~kGLa~~~Gm~~~~vpg~tg~~~t----~~~~k~~~~~~~l----------~  292 (412)
T PRK04024        228 GAGEVPEIPKFTEKY-GLKAACVAGTALIKGIARMVGMDVITVEGATGGKDT----NYMAKAKAAVELL----------K  292 (412)
T ss_pred             CCCCCCCCCCHHHhc-CCceEEEeChHHHHHHHHHcCCceeccCCCcCCCCC----CHHHHHHHHHHHh----------c
Confidence            335689999999999 999999999999999999999999999999999997    9999999999999          7


Q ss_pred             cccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhccccc
Q 020825          160 QFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEK  238 (321)
Q Consensus       160 ~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~  238 (321)
                      +|||||+|++++|++||.|+ ++|+++||.||+.|+.|++.++.. +     .+++|++                     
T Consensus       293 ~~Dfv~vh~~~~D~~GH~gd~~~k~~aiE~iD~~l~~il~~l~~~-~-----~~liITa---------------------  345 (412)
T PRK04024        293 EYDFVLLNIKGTDEAGHDGDFEGKVEVIEKIDKMLGYILDNLDLD-E-----VYIAVTG---------------------  345 (412)
T ss_pred             cCCEEEEeccCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhcC-C-----CEEEEec---------------------
Confidence            89999999999999999999 999999999999999999887421 1     3567775                     


Q ss_pred             CcccccccCCcccccCCCCCC----CCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHhc
Q 020825          239 SSDLSALFPRQSYTMKGETPR----NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  314 (321)
Q Consensus       239 p~~~~~l~P~QSY~~kdh~tp----~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL~  314 (321)
                                      ||.||    +|+++|||++|+  ++ .+|+|.++.|+|.+|.+ ||+++|+|.++|+.++.+++
T Consensus       346 ----------------DHgtp~~~~~HT~~pVP~ii~--g~-~v~~d~~~~f~E~~~~~-g~l~~~~g~~lm~~~l~~~~  405 (412)
T PRK04024        346 ----------------DHSTPVEVKDHSGDPVPILIY--GP-GVRVDDVEKFNELSAAK-GGLGRIRGLDVMPILLDLMN  405 (412)
T ss_pred             ----------------CCCCCcccccCCCCCEeEEEE--cC-CccCCCCCccCHHHHhC-CCCCcccHHHHHHHHHHHhc
Confidence                            44444    688999999994  44 56899999999999777 99999999999999999999


Q ss_pred             CCcCCCC
Q 020825          315 KAPKYGA  321 (321)
Q Consensus       315 kapKYGA  321 (321)
                      |+.||||
T Consensus       406 ~~~~~g~  412 (412)
T PRK04024        406 RAEKFGA  412 (412)
T ss_pred             hHhhcCC
Confidence            9999998

>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional

Probab=100.00  E-value=1.6e-33  Score=277.57  Aligned_cols=169  Identities=21%  Similarity=0.291  Sum_probs=150.7

Q ss_pred             cCCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcc
Q 020825           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (321)
Q Consensus        82 ~~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~  161 (321)
                      ...|.+|+|.||| |||+++|+++++++|+|+++||+|+.+||+||+.||    ||.+|+++++++|          ++|
T Consensus       220 G~~p~~p~f~e~~-gl~~a~ia~~~l~kGla~~~Gm~~~~vpgatg~~dt----~~~~k~~~a~~~l----------~~~  284 (395)
T PRK04200        220 GYAPKMPSFKEKY-GLKGAVISAVDLLKGIGIYAGLDVIEVPGATGYLDT----NYEGKAEAALEAL----------KTH  284 (395)
T ss_pred             CCCCCCCCHHHhc-CCceEEEeccHHHHHHHHHcCCccccCCCccccccc----chHHHHHHHHHHh----------ccC
Confidence            4589999999999 999999999999999999999999999999999997    9999999999999          789


Q ss_pred             cEEEEeccCCCCCCCccc-hhhhhhhHHHHH-HHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccccC
Q 020825          162 DLVLVHIGAGEKTNDDKG-KAVAHDLEYINA-LVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKS  239 (321)
Q Consensus       162 DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~-lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~p  239 (321)
                      ||||||++++|+++|+|+ ++|+++||.||+ +++++++.++.. +    .++++|++                      
T Consensus       285 DfV~vh~~~~D~aGH~gd~~~kv~aiE~lD~~~~~~ll~al~~~-~----~~~l~it~----------------------  337 (395)
T PRK04200        285 DFVFVHVEAPDEAGHEGDLEAKIKAIEDIDERVVGPILEALKKY-E----DYRILVLP----------------------  337 (395)
T ss_pred             CEEEEEecCcchhhccCCHHHHHHHHHHHHHHhHHHHHHHHHhc-C----CCEEEEec----------------------
Confidence            999999999999999999 889999999999 577899886420 0    13677775                      


Q ss_pred             cccccccCCcccccCCCCCC----CCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHH
Q 020825          240 SDLSALFPRQSYTMKGETPR----NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAF  311 (321)
Q Consensus       240 ~~~~~l~P~QSY~~kdh~tp----~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evaf  311 (321)
                                     ||.||    +|+.+|||++|  +++ .+|.|.|+.|+|.+|.+ ||+++|+|.++|+.++.
T Consensus       338 ---------------DH~tp~~~~~Ht~~pVP~ii--~g~-~~~~d~~~~f~E~~~~~-g~l~~~~g~~lm~~~l~  394 (395)
T PRK04200        338 ---------------DHPTPIELKTHTADPVPFLI--YGE-GIEPDGVQTFDEKSARK-GGLGLVEGCELMELLLK  394 (395)
T ss_pred             ---------------cCCcCCCCCccCCCCEeEEE--EcC-CcCCCCCCccCHHHHcC-CCcccccHHHHHHHHhh
Confidence                           55555    68899999999  555 67889999999999877 99999999999999875

>TIGR02535 hyp_Hser_kinase proposed homoserine kinase

Probab=100.00  E-value=2e-32  Score=269.85  Aligned_cols=169  Identities=20%  Similarity=0.317  Sum_probs=149.4

Q ss_pred             cCCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcc
Q 020825           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (321)
Q Consensus        82 ~~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~  161 (321)
                      ...|.+|+|.||| |||+++|+++++++|+|+++||+|+.+||+||+.||    ||.+|+++++++|          ++|
T Consensus       221 G~~p~~p~f~e~~-gl~~a~ia~~~l~kGla~~~Gm~~~~vpgatg~~dt----~~~~k~~~~~~~l----------~~~  285 (396)
T TIGR02535       221 GGAPKMPTFSERY-GIRGAMISAVDLLKGIGIYAGLERIEVEGATGYLDT----NYEGKVRAALEAL----------ETY  285 (396)
T ss_pred             CCCCCCCCHHHhc-CCceEEEeccHHHHHHHHHcCCccccCCcccccccc----chHHHHHHHHHHH----------hhC
Confidence            4589999999999 999999999999999999999999999999999996    9999999999999          789


Q ss_pred             cEEEEeccCCCCCCCccc-hhhhhhhHHHHH-HHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccccC
Q 020825          162 DLVLVHIGAGEKTNDDKG-KAVAHDLEYINA-LVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKS  239 (321)
Q Consensus       162 DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~-lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~p  239 (321)
                      ||||||++++|+++|+|+ ++|+++||.+|+ ++++++++++..   + ...+++|++                      
T Consensus       286 Dfv~vh~~~~D~aGH~gd~~~kv~aIE~lD~~~~~~ll~al~~~---~-~~~~~~vt~----------------------  339 (396)
T TIGR02535       286 DFVVVHVEAPDEAGHEGDLEAKIKAIELIDSRIVGPLLEALSDR---D-EPFRILVLP----------------------  339 (396)
T ss_pred             CEEEEEeCCCChhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhc---C-CCeEEEEee----------------------
Confidence            999999999999999999 889999999999 577899886321   0 013677775                      


Q ss_pred             cccccccCCcccccCCCCCC----CCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHH
Q 020825          240 SDLSALFPRQSYTMKGETPR----NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVA  310 (321)
Q Consensus       240 ~~~~~l~P~QSY~~kdh~tp----~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~eva  310 (321)
                                     ||.||    +|+.+|||++|+..   .+|.|.+++|+|.+|.+ |+++++.|.++|+.++
T Consensus       340 ---------------DH~tp~~~~~Ht~~pVP~ii~g~---~~~~d~~~~f~E~~~~~-g~l~~~~g~~lm~~~~  395 (396)
T TIGR02535       340 ---------------DHPTPLELKTHTAEPVPFLLYGK---GIESDSVKTFDEKSARR-GGIGFVKGCELMDALI  395 (396)
T ss_pred             ---------------eCccCCCCCccCCCCEeEEEEeC---CcCCCCCCccCHHHHcC-CCcccccHHHHHHHHh
Confidence                           45555    68899999999544   57899999999999877 9999999999999875

The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.

>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form

Probab=100.00  E-value=2e-32  Score=270.03  Aligned_cols=169  Identities=15%  Similarity=0.241  Sum_probs=150.1

Q ss_pred             cccCCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccC
Q 020825           80 KWEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVS  159 (321)
Q Consensus        80 ~~~~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~  159 (321)
                      .....|.+|+|.||| |||+|+|+++++++|+|+++||+|+.+||+||+.+|    +|.+|+++++++|          +
T Consensus       222 G~G~~p~l~~f~er~-gl~~a~ia~~~l~kGLa~~~Gm~~~~v~gatg~~dt----~~~~k~~~~~~~l----------~  286 (396)
T TIGR00306       222 GAGRMPRVESFKERY-GLRGAMIAEVDLIKGLARLIGMDVIRVEGATGGIDT----DYRGKVRALILAL----------E  286 (396)
T ss_pred             CCCCCCCCCCHHHhc-CCceEEEechHHHHHHHHHcCCeeecCCcccccccc----cHHHHHHHHHHHh----------h
Confidence            334689999999999 999999999999999999999999999999999997    9999999999999          7


Q ss_pred             cccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhccccc
Q 020825          160 QFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEK  238 (321)
Q Consensus       160 ~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~  238 (321)
                      +|||||||++++|+++|.|+ ++|+++||.+|+.+..+++.++..      ..+++|++                     
T Consensus       287 ~yDfv~v~~~~~D~aGH~gd~~~k~~aIE~iD~~l~~~l~~l~~~------~~~liiTa---------------------  339 (396)
T TIGR00306       287 EYDFVLVHTKGPDEAGHDGDPELKVRAIEKIDSKIVGPLLALDLD------ETRLILTA---------------------  339 (396)
T ss_pred             cCCEEEEEecCCChhhhcCCHHHHHHHHHHHHHHHHHHHHHhhhC------CCEEEEeC---------------------
Confidence            89999999999999999999 889999999999887668776432      14677775                     


Q ss_pred             CcccccccCCcccccCCCCCC----CCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHH
Q 020825          239 SSDLSALFPRQSYTMKGETPR----NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVA  310 (321)
Q Consensus       239 p~~~~~l~P~QSY~~kdh~tp----~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~eva  310 (321)
                                      ||.||    +|+++|||++|+..   .+|+|.|++|+|.+|.+ |++++|+|.++|+.++
T Consensus       340 ----------------DHgtp~~~~~Ht~~pVP~ii~g~---~~~~d~~~~f~E~~~~~-g~l~~~~g~~lm~~~l  395 (396)
T TIGR00306       340 ----------------DHSTPVEVKDHSADPVPIVIVGP---GVRVDEVKSFNEFACRK-GALGRIRGEDLMDILL  395 (396)
T ss_pred             ----------------CCCCCCCCCCCCCCCeeEEEEeC---CccCCCCCCcChHHHhC-CCCCcccHHHHHHHHh
Confidence                            44454    58899999999544   67899999999999887 9999999999999886

This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).

>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases

Probab=99.88  E-value=7.5e-23  Score=189.46  Aligned_cols=229  Identities=19%  Similarity=0.313  Sum_probs=168.8

Q ss_pred             ceEEEeccCcccccCC--------CchhhHHHhh------hccccc-eecCCCCCCChhhHHHHHHHHHHhccccccccC
Q 020825            7 KALVLYGDGLARFVEP--------SHAHLHSLAS------KAACGF-LSLPIAPPSESEEERIVREFAVLIDANQDYLSG   71 (321)
Q Consensus         7 r~lvl~~dG~~~~~~~--------~~~hl~~~as------~~~cGf-L~l~~~~~~~~~~~~~~~e~aqLld~~~~~~~~   71 (321)
                      |.++|-.||+..--.+        ...+|+.||.      .+.||. +.+|..   ---+    -|.+++--+...    
T Consensus         2 r~ilivlDG~G~g~~~~~t~l~~a~tptld~la~~~p~~~~~~~G~~~~lp~g---~~g~----S~~~~~~~~~~~----   70 (252)
T PF01676_consen    2 RVILIVLDGLGDGPMPDATPLEDAGTPTLDHLAAAYPHALLGASGLMVGLPPG---QLGG----SDVGHLAIFRGA----   70 (252)
T ss_dssp             EEEEEEETTBC-SCBTTTGHHHHSTEHHHHHHHHHSCEEEEBESGGGGTSSTT---CHTH----HHHHHHHHEECE----
T ss_pred             cEEEEEeccCCCCCCCCcChHhhcCCcHHHHHHHhhcccccccccCcccCCCC---CcCC----cccccccccccc----
Confidence            7899999999876655        4789999999      888886 555421   1111    122333223233    


Q ss_pred             CCCccccccccCCCCCC-ChhhhhcCCcEEEEecCchhhhHhhhhC-CeeeecCcccccCCCCCCCChHHH--HHHHHHH
Q 020825           72 IGEHTTELKWEEKSPFQ-TISDRFMGLKAALITTNSRLKSFGDKLG-FATLQLNELIETSDSLSGSPIDVV--ASELLKL  147 (321)
Q Consensus        72 ~~~~~~~~~~~~~p~~p-~f~ErymglKaA~It~~~llkg~g~~lG-~~Vi~v~g~tg~~dt~~~~~~~~~--a~~al~l  147 (321)
                                ...+.+| +|.++| ||++++|+.+.++.+++.++| ++|+..+|+|+..++    ++.++  ++++++.
T Consensus        71 ----------~~~~~~~~~~~~~~-~l~~~~ia~~~~~~~i~~~~~g~~v~~~~g~t~~~~~----~~~~~~~~~~~~~~  135 (252)
T PF01676_consen   71 ----------GDYPNLPPSFTEKY-GLKGAGIAETPKIGGIADFFGGMDVISVEGATGDVDP----DMSAKEIAEAAIEA  135 (252)
T ss_dssp             ----------EEEES-HHHHHHHC-THHEEEEEECHHHHHHHHHTTTEEEE--STSSCCGST----TTTHHHHHHHHHHH
T ss_pred             ----------ccccccccceeecc-CceecceecccccceeHHHhCCccccccccccccccc----chhhHHHHHHHHHh
Confidence                      1344466 999999 999999999999999999999 999999999999886    76555  8899988


Q ss_pred             hccccCcccccCcccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccC
Q 020825          148 LGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADN  226 (321)
Q Consensus       148 Lg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~  226 (321)
                      |        +..+|||||+|+..+|++||.++ +++.++||++|+.|+.|++.++.. +     .+++|++       ||
T Consensus       136 l--------~~~~~~~v~~~~~~~D~~GH~~~~~~~~~~ie~~D~~l~~l~~~~~~~-~-----~~liiTa-------DH  194 (252)
T PF01676_consen  136 L--------KKDKYDFVFVHVKGTDEAGHRGDPEAYIEAIERIDRFLGRLLEALDKE-D-----DLLIITA-------DH  194 (252)
T ss_dssp             H--------HHTTSSEEEEEEEHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHT-T-----EEEEEEE-------SS
T ss_pred             h--------hcccCCeEEEeecCcchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcC-C-----CEEEEEC-------CC
Confidence            8        34789999999999999999999 899999999999999999987321 1     4677775       36


Q ss_pred             CccchhhcccccCcccccccCCcccccCCCCCCCCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHH
Q 020825          227 SNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFL  306 (321)
Q Consensus       227 ~~~~v~~~~~~~p~~~~~l~P~QSY~~kdh~tp~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m  306 (321)
                      .          ++.           ++++   ..|+++|||+++  |++ ..|.|.+..|++.+... +..+.+.|..+|
T Consensus       195 g----------~~~-----------~~~~---~~Ht~~~VPll~--~g~-~~~~~~~~~~~~~~di~-~ti~~~~G~~~~  246 (252)
T PF01676_consen  195 G----------NDE-----------TMGH---TSHTREPVPLLI--YGP-GVRGDSVGEFGELADIA-PTILELLGLELP  246 (252)
T ss_dssp             B----------STT-----------TSBS---SS-B-B-EEEEE--ECT-TEEE-SC-STSBCGHHH-HHHHHHHTGGHH
T ss_pred             C----------Ccc-----------ccCC---cCCCCceEEEEE--EeC-CCccCccCcCCEEehHH-HHHHHHcCCCch
Confidence            5          233           1222   238899999999  554 67889999999999787 999999999988


Q ss_pred             HHHH
Q 020825          307 HEVA  310 (321)
Q Consensus       307 ~eva  310 (321)
                      +++.
T Consensus       247 ~~~~  250 (252)
T PF01676_consen  247 EEMT  250 (252)
T ss_dssp             TTCH
T ss_pred             Hhhc
Confidence            7754

This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....

>PRK12383 putative mutase; Provisional

Probab=99.40  E-value=2.7e-12  Score=128.00  Aligned_cols=95  Identities=12%  Similarity=0.104  Sum_probs=81.7

Q ss_pred             CCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcccEE
Q 020825           85 SPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLV  164 (321)
Q Consensus        85 p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~DlV  164 (321)
                      +.+|+|.++| |+++++|         |+..  +++..+|+|++..+   .+.+.++.+++++|.        ...+|||
T Consensus       234 ~~v~~~l~~~-G~~v~~V---------GKi~--Di~s~~G~t~~~~~---~~t~~~~~~~l~aL~--------~~~~dlv  290 (406)
T PRK12383        234 VQVPQKLYEA-GVPVVLV---------GKVA--DIVNNPYGVSWQNL---VDTQRVMDITLDEFN--------THPTAFI  290 (406)
T ss_pred             chhhhHHHHc-CCCEEEE---------EEhH--HeeccCCccccccc---CCHHHHHHHHHHHHh--------cCCCCEE
Confidence            7899999999 9999999         4444  88889999996654   366699999999992        2348999


Q ss_pred             EEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCC
Q 020825          165 LVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQP  202 (321)
Q Consensus       165 fvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~  202 (321)
                      |+|+..+|.+||.++ +.+..+||.+|+.|+.|++.+++
T Consensus       291 fvnl~~~D~~GH~~d~~~y~~aiE~iD~~lg~ll~~L~~  329 (406)
T PRK12383        291 CTNIQETDLAGHAEDVARYAERLEVVDRNLARLLEAMTP  329 (406)
T ss_pred             EEeccCCccccccCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999 88888999999999999988764

>TIGR01696 deoB phosphopentomutase

Probab=98.83  E-value=6.2e-08  Score=96.41  Aligned_cols=165  Identities=11%  Similarity=0.131  Sum_probs=103.8

Q ss_pred             CCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCccc
Q 020825           83 EKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFD  162 (321)
Q Consensus        83 ~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~D  162 (321)
                      -.|+-|++.||- .=.+.-++.+..+        .|.+.-.|+|....+   .+.+..+++++++|.        ...+|
T Consensus       212 ~~p~~pTvld~l-~~aG~~V~~VGki--------~DiF~g~Glt~a~~~---~~~~~~~~~~l~aL~--------~~~~~  271 (381)
T TIGR01696       212 LKPFAPTVLQKL-KDEGHDVISIGKI--------ADIYDGEGITKKVRT---TSNMDGMDATIKEMK--------EDFTG  271 (381)
T ss_pred             CCCCCCCHHHHH-HHCCCeEEEEccH--------HhEecCCCcccccCC---CCHHHHHHHHHHHHh--------cCCCC
Confidence            345566777766 3333333333332        123344555554433   367778889998882        13489


Q ss_pred             EEEEeccCCCC-CCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccccCc
Q 020825          163 LVLVHIGAGEK-TNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS  240 (321)
Q Consensus       163 lVfvHv~a~d~-a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~p~  240 (321)
                      |||+|+...|. +||.++ +....+||.+|+.|+.|++.++++       .+++|++       ||-.         -|.
T Consensus       272 lif~nl~d~D~~~GH~~d~~~y~~ale~vD~~Lg~ll~~L~~~-------tllIITA-------DHG~---------Dp~  328 (381)
T TIGR01696       272 ISFTNLVDFDALWGHRRDVAGYAAALELFDRRLPELFSLLRED-------DLLIITA-------DHGN---------DPT  328 (381)
T ss_pred             EEEEEeCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHhccC-------CEEEEEC-------CCCC---------CCC
Confidence            99999999995 799999 888889999999999999988642       2456663       3531         011


Q ss_pred             ccccccCCcccccCCCCCCCCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHhcCC-cCC
Q 020825          241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKA-PKY  319 (321)
Q Consensus       241 ~~~~l~P~QSY~~kdh~tp~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL~ka-pKY  319 (321)
                                  .   .-.+|+|++||++++..+   .+.-  ..+        +-  +.-..++.+.++..++-. |.+
T Consensus       329 ------------~---~~t~HTre~VPlIi~gp~---i~~g--~~l--------~~--~~slaDIapTIldllGv~~p~~  378 (381)
T TIGR01696       329 ------------W---TGTDHTREYIPVLVYSPK---VKPG--HSL--------GH--RETFADIGATIADNFGTSDPEY  378 (381)
T ss_pred             ------------C---CCCcCCCCCEeEEEEECC---CCCC--cee--------CC--CCEehhHHHHHHHHcCcCCCCC
Confidence                        0   002478999999994432   2211  001        11  234578899999988866 777


Q ss_pred             C
Q 020825          320 G  320 (321)
Q Consensus       320 G  320 (321)
                      |
T Consensus       379 G  379 (381)
T TIGR01696       379 G  379 (381)
T ss_pred             C
Confidence            6

This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.

>PRK05434 phosphoglyceromutase; Provisional

Probab=98.76  E-value=3.4e-08  Score=101.34  Aligned_cols=147  Identities=13%  Similarity=0.194  Sum_probs=103.9

Q ss_pred             cCCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcc
Q 020825           82 EEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (321)
Q Consensus        82 ~~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~  161 (321)
                      ...+.+|. .||| ++++.+|+..++.              |++          +...++.++++.|.        ..+|
T Consensus       343 G~~~~~~~-e~r~-~~~s~~va~yd~~--------------p~M----------s~~e~~d~~i~~l~--------~~~~  388 (507)
T PRK05434        343 GREEPFPG-EDRI-LIPSPKVATYDLK--------------PEM----------SAYEVTDKLVEAIE--------SGKY  388 (507)
T ss_pred             CcCCCCCC-ceee-ecCCceeecccCC--------------CCC----------cHHHHHHHHHHHHh--------ccCC
Confidence            34677888 9999 9999999888874              222          44557889998882        2579


Q ss_pred             cEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccccCc
Q 020825          162 DLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS  240 (321)
Q Consensus       162 DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~p~  240 (321)
                      ||||||+..+|.+||.|+ ++++++||.+|+.|+.|++.++..  .    .+++|++       ||-..-          
T Consensus       389 Dfv~vnf~~~D~vGHtg~~~a~~~AIe~vD~~LGrll~aLk~~--g----~ivIITA-------DHGn~e----------  445 (507)
T PRK05434        389 DFIILNFANPDMVGHTGNLEAAVKAVEAVDECLGRVVDAVLKV--G----GTLLITA-------DHGNAE----------  445 (507)
T ss_pred             CEEEEEecCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhC--C----CEEEEEc-------CCCccc----------
Confidence            999999999999999999 888899999999999999887531  1    2566664       364110          


Q ss_pred             ccccccCCcccccCCC----CCCCCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHhcC
Q 020825          241 DLSALFPRQSYTMKGE----TPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWK  315 (321)
Q Consensus       241 ~~~~l~P~QSY~~kdh----~tp~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL~k  315 (321)
                                 .|.++    +...|+..|||++|+.  +...+ +           ..|     ...++.+.++..||-
T Consensus       446 -----------~m~d~~tg~~~~~HT~~~VPlII~~--p~~i~-~-----------~~~-----sL~DIaPTIL~LlGi  494 (507)
T PRK05434        446 -----------QMIDPETGQPHTAHTTNPVPFILVG--GKALR-L-----------EGG-----KLADIAPTILDLLGL  494 (507)
T ss_pred             -----------ccccCCCCCcccCCCCeeeEEEEEE--CCccc-C-----------CCc-----cHHHHHHHHHHHhCc
Confidence                       01111    1225778999999843  31111 1           112     458899999988874

>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Probab=98.57  E-value=2.6e-07  Score=95.68  Aligned_cols=59  Identities=22%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             ChHHHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCC
Q 020825          136 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQP  202 (321)
Q Consensus       136 ~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~  202 (321)
                      ....++.++++.+        ...+|||||+|+..+|.+||.|+ ++++++||.+|+.|+.|++.++.
T Consensus       404 SA~eVtd~~i~~i--------~~~~ydfi~vNfan~DmvGHtG~~ea~ikAIE~vD~~Lg~Il~al~~  463 (558)
T PLN02538        404 KALEIAEKARDAL--------LSGKFDQVRVNLANGDMVGHTGDLEATIVACEAVDAAVKEILDAVEQ  463 (558)
T ss_pred             CHHHHHHHHHHHH--------hcCCCCEEEEeccCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4556778888877        33579999999999999999999 88888999999999999988743

>PRK05362 phosphopentomutase; Provisional

Probab=98.33  E-value=4.7e-06  Score=83.42  Aligned_cols=69  Identities=13%  Similarity=0.109  Sum_probs=55.8

Q ss_pred             CChHHHHHHHHHHhccccCcccccCcccEEEEeccCCCC-CCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEE
Q 020825          135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHL  212 (321)
Q Consensus       135 ~~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~-a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~  212 (321)
                      .++..++.++++.|.       +..+++|||+|+...|. .+|.++ +....+||.+|+.|+.|++.++..       .+
T Consensus       259 ~~~~~~~~~ale~L~-------~~~~~~fvfvn~~~~D~~~GH~~~~~~y~~ale~~D~~lg~ll~~L~~~-------tl  324 (394)
T PRK05362        259 KSNMDGMDATIEEMK-------EAGDNGLVFTNLVDFDSLYGHRRDVAGYAAALEEFDARLPELLAALKED-------DL  324 (394)
T ss_pred             CCHHHHHHHHHHHHH-------hCCCCcEEEEecccCccccCCcCCHHHHHHHHHHHHHHHHHHHHHhccC-------CE
Confidence            377889999999881       02468999999999998 499999 888889999999999999987542       35


Q ss_pred             EEEEe
Q 020825          213 SVVLS  217 (321)
Q Consensus       213 ~lVl~  217 (321)
                      ++|++
T Consensus       325 liiTa  329 (394)
T PRK05362        325 LIITA  329 (394)
T ss_pred             EEEeC
Confidence            66664

>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Probab=97.54  E-value=0.00035  Score=72.15  Aligned_cols=59  Identities=15%  Similarity=0.323  Sum_probs=50.3

Q ss_pred             ChHHHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCC
Q 020825          136 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQP  202 (321)
Q Consensus       136 ~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~  202 (321)
                      ....++.++++.|        +...|||||+|+..+|..||.|+ ++..++||.+|..||.|++.++.
T Consensus       365 sa~evtd~~i~~I--------~~~k~dfi~vnfan~DmvGHtg~~~a~v~AIE~vD~~LGrIl~aLke  424 (501)
T TIGR01307       365 SAKAVTDAVLEAI--------AQGKFDLIVVNFANPDMVGHTGNFEAAIKAVEALDVCLGRIVEACKK  424 (501)
T ss_pred             CHHHHHHHHHHHH--------hccCCCEEEEECCCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4456778888877        23569999999999999999999 68888999999999999998754

This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.

>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH

Probab=97.09  E-value=0.0082  Score=59.98  Aligned_cols=141  Identities=13%  Similarity=0.094  Sum_probs=85.9

Q ss_pred             CChHHHHHHHHHHhccccCcccccCcccEEEEeccC--CCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceE
Q 020825          135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGA--GEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLH  211 (321)
Q Consensus       135 ~~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a--~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~  211 (321)
                      ++.....++++++|.         +..+-.||||+.  .|.++|..+ ..+...++.+|..|+.+++.++.. +    ..
T Consensus       231 psL~emt~~al~~L~---------~~~~gFfl~ve~~~iD~~gH~~d~~~~~~~l~~~D~av~~~l~~l~~~-~----dT  296 (384)
T cd00016         231 PSLAEMTEKAIDVLS---------KNPNGFFLMVEGGRIDHAHHANDAAGALSETLAFDDAVEAALDFAKKD-G----DT  296 (384)
T ss_pred             CCHHHHHHHHHHHHH---------hcCCcEEEEEeCCCCCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhCC-C----Ce
Confidence            578889999999992         334777788886  899999988 777889999999999999887521 1    14


Q ss_pred             EEEEEeccccccccCCccc-hhhcccccCcc------cccccCCcccccCCC--CCCCCCCCCccEEEEEccccceecCC
Q 020825          212 LSVVLSYGQVLEADNSNLS-VLISIDEKSSD------LSALFPRQSYTMKGE--TPRNDVRHHCPMLISQWQYAVTRKDM  282 (321)
Q Consensus       212 ~~lVl~yg~~~~d~~~~~~-v~~~~~~~p~~------~~~l~P~QSY~~kdh--~tp~h~rdpvP~li~~~~~~~tR~D~  282 (321)
                      +++|++       ||...- ++-........      ....+....|+.-.-  ++-+|++.+||++.++.+.  .    
T Consensus       297 LiIvTA-------DHg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~Htg~~Vpv~a~Gp~a--~----  363 (384)
T cd00016         297 LVVVTA-------DHSHGGTILGYAGRGNPILGLADAPELDVDGLPYTTLTYANTTGTHGGEDVPVFAYGPGS--H----  363 (384)
T ss_pred             EEEEEC-------CCCCCccccCCCCCCCcccccccccccccCCCCceEEEecCCCCCCcCceeeEEeecCCc--c----
Confidence            677774       465321 11110000000      001111122221111  3457999999999955543  1    


Q ss_pred             CcccChHHHHhccCCcceeHHhHHHHHHHHhc
Q 020825          283 AETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  314 (321)
Q Consensus       283 v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL~  314 (321)
                        .|.          |.+.-.++.|.|++.|+
T Consensus       364 --~f~----------g~~ent~I~~~i~~al~  383 (384)
T cd00016         364 --LFR----------GVMENTEIAHVMAYALG  383 (384)
T ss_pred             --ccC----------cceecHHHHHHHHHHhc
Confidence              222          25666777777776554

Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.

>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]

Probab=96.36  E-value=0.026  Score=56.75  Aligned_cols=75  Identities=11%  Similarity=0.068  Sum_probs=54.0

Q ss_pred             eeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcc-cEEEEeccCCC-CCCCccc-hhhhhhhHHHHHHHH
Q 020825          118 ATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF-DLVLVHIGAGE-KTNDDKG-KAVAHDLEYINALVR  194 (321)
Q Consensus       118 ~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~-DlVfvHv~a~d-~a~h~G~-~~k~~~IE~iD~lVg  194 (321)
                      |++.-.|.|....+   .+.+......++.++        ...+ .|||.++.-.| ..||--+ ..=+++||.+|+-+.
T Consensus       248 DI~~~~Git~~~~~---~~n~~~~d~tl~~~~--------~~~~~~~vFtNlVdfD~~yGHRrDv~gYa~aLe~FD~rL~  316 (397)
T COG1015         248 DIYAGQGITEKVKA---VSNMDGMDVTLEEMK--------TAEFNGLVFTNLVDFDSLYGHRRDVAGYAAALEEFDRRLP  316 (397)
T ss_pred             hhhccccccccccC---CCcHHHHHHHHHHHh--------cCCCCcEEEEeeeecccccccccchHHHHHHHHHHHHHHH
Confidence            45555666665543   244555666676662        2233 59999999998 7899777 666679999999999


Q ss_pred             HHHHhcCCC
Q 020825          195 VILQMAQPA  203 (321)
Q Consensus       195 ~il~~~~~~  203 (321)
                      .+++.++++
T Consensus       317 e~~~~l~ed  325 (397)
T COG1015         317 ELIENLRED  325 (397)
T ss_pred             HHHHhcCCC
Confidence            999999874

>KOG4513 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]

Probab=94.18  E-value=0.28  Score=49.97  Aligned_cols=56  Identities=16%  Similarity=0.175  Sum_probs=46.5

Q ss_pred             HHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCC
Q 020825          139 VVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQP  202 (321)
Q Consensus       139 ~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~  202 (321)
                      .+|.++.+.+        +...||+|.|++..+|-.+|-|+ |.-+.+.|--|..|+.|.++.+.
T Consensus       391 eva~ka~~~i--------e~G~~p~v~vNlappDMVGHTG~~EAtv~AcEatD~aig~Iy~A~~~  447 (531)
T KOG4513|consen  391 EVAEKARDAI--------ESGKFPQVRVNLAPPDMVGHTGDIEATVVACEATDEAIGKIYDAIEQ  447 (531)
T ss_pred             HHHHHHHHHH--------HcCCCCeEEEcCCCccccCcccchhhhhhHHHHHHHHHHHHHHHHHh
Confidence            4555555554        34679999999999999999999 88888999999999999988643

>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]

Probab=92.61  E-value=0.61  Score=48.59  Aligned_cols=57  Identities=14%  Similarity=0.308  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCC
Q 020825          138 DVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQP  202 (321)
Q Consensus       138 ~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~  202 (321)
                      -.+..++++.+        +...||+++++..-+|-.+|.|. +.-++++|-+|.=||.+.+....
T Consensus       374 ~evtd~~~~~i--------~~g~~D~iV~N~ANpDMVGHTG~~eatiKAvEavD~~lg~ivd~~~~  431 (509)
T COG0696         374 KEVTDALVEAI--------EKGKYDLIVLNYANPDMVGHTGNFEATIKAVEAVDECLGRIVDAVKK  431 (509)
T ss_pred             HHHHHHHHHHH--------hCCCCCEEEEecCCCccCcccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34556666655        33458999999999999999999 78888999999999999887653

>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase)

Probab=91.06  E-value=0.31  Score=45.58  Aligned_cols=58  Identities=12%  Similarity=0.085  Sum_probs=42.9

Q ss_pred             cCcccEEEEeccCCCCCCC---ccchhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 020825          158 VSQFDLVLVHIGAGEKTND---DKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  217 (321)
Q Consensus       158 ~~~~DlVfvHv~a~d~a~h---~G~~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~  217 (321)
                      ..+.||+++|+..+|..+|   ..+.+-...+.++|..|+.+++.++..  .......++|++
T Consensus       181 ~~~pdl~~~~~~~~D~~~H~~g~~s~~~~~~~~~~D~~ig~l~~~l~~~--~~~~~~~iiv~S  241 (365)
T PF01663_consen  181 KERPDLIFVYFPEPDHIGHRYGPDSPEIEDAYRRIDQAIGRLLEALDEN--GLLEDTNIIVTS  241 (365)
T ss_dssp             TTTESEEEEEEECCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHT--T-TTTEEEEEEE
T ss_pred             hCCCCEEEEEecCCCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhh--CCCCceEEEEEc
Confidence            4679999999999999988   323556679999999999999887643  111125566665

These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....

>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional

Probab=80.77  E-value=1.4  Score=44.73  Aligned_cols=38  Identities=32%  Similarity=0.458  Sum_probs=32.8

Q ss_pred             CCCceEEEeccCcccccCC----------CchhhHHHhhhccccceec
Q 020825            4 KPSKALVLYGDGLARFVEP----------SHAHLHSLASKAACGFLSL   41 (321)
Q Consensus         4 kpsr~lvl~~dG~~~~~~~----------~~~hl~~~as~~~cGfL~l   41 (321)
                      .|+|.|||-+||++..--+          ..+|||.||+.|.||.+--
T Consensus         6 ~~~K~v~ii~DGmgD~p~~e~gkTPLe~A~tPnlD~lA~~G~~Gl~~~   53 (395)
T PRK04135          6 NDSKIVLLVLDGLGGLPHPENGKTELEAAKTPNLDALAKESDLGLLIP   53 (395)
T ss_pred             CCCcEEEEEecCCCCCCCCCCCCChhhccCCCChHHHHHcCCccccee
Confidence            5889999999999987643          5889999999999998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	321
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 7e-06
 Identities = 57/361 (15%), Positives = 105/361 (29%), Gaps = 94/361 (26%)

Query: 3   DKPSKALVLYGDG------LARFVEPSH-------------------------AHLHSLA 31
            +P+K +++ G        +A  V  S+                           L  L 
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206

Query: 32  SKAACGFLSLP-----IAPPSESEEERIVREFAVLIDANQDY------LSGIGEHTTELK 80
            +    + S       I     S +  + R        ++ Y      L  +        
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL-----KSKPYENCLLVLLNV-------- 253

Query: 81  WEEKSPFQTISDRF-MGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDV 139
              K       + F +  K  L+TT  R K   D L  AT     L   S +L+    D 
Sbjct: 254 QNAK-----AWNAFNLSCK-ILLTT--RFKQVTDFLSAATTTHISLDHHSMTLTP---DE 302

Query: 140 VASELLKLLGLQRGKM-EEVSQFD-LVLVHIGAGEKTNDDKGKAVAH-DLEYINALVRVI 196
           V S LLK L  +   +  EV   +   L  I    +          H + + +  ++   
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 197 LQMAQPATEVGSRLHLSVVLSYG-----QVLEA--DNSNLSVLISIDEKSSDLSAL---F 246
           L + +PA E         V          +L     +   S ++ +  K    S +    
Sbjct: 363 LNVLEPA-EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421

Query: 247 PRQSYTMKG------ETPRNDVRHHCPMLISQWQYAVTRKDMAETFS--FKD--FKEHGG 296
              + ++            N+   H   ++    Y + +   ++     + D  F  H G
Sbjct: 422 KESTISIPSIYLELKVKLENEYALH-RSIVD--HYNIPKTFDSDDLIPPYLDQYFYSHIG 478

Query: 297 Y 297
           +
Sbjct: 479 H 479

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 43/306 (14%), Positives = 86/306 (28%), Gaps = 90/306 (29%)

Query: 67  DYLSGIGEHTTE---LKW----EEKSPFQ--TISDRFMGLKAALI----TTNSRLKSFGD 113
            +   +     +   LK+     +  P +  T + R + + A  I     T    K    
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 114 KLGFATLQLNELIETS-DSLSGS------------PIDV-VASELLKLLGLQRGKMEEVS 159
                  +L  +IE+S + L  +            P    + + LL L+        +V 
Sbjct: 353 D------KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD-VIKSDVM 405

Query: 160 QFDLVLVHIGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYG 219
                L      EK    +       +          L++        + LH S+V  Y 
Sbjct: 406 VVVNKLHKYSLVEK-QPKESTISIPSI---------YLELKVKLENEYA-LHRSIVDHYN 454

Query: 220 QVLEADNSNLSV--------------LISIDEKSSDLSALFPRQSYT----MKGETPRND 261
                D+ +L                L +I+    +   LF    +     ++       
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH--PERMTLFRMV-FLDFRFLE-----QK 506

Query: 262 VRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLT--IPAD--------RFLHEVAF 311
           +RH      + W  + +  +       +  K +  Y+    P           FL ++  
Sbjct: 507 IRHDS----TAWNASGSILNT-----LQQLKFYKPYICDNDPKYERLVNAILDFLPKIEE 557

Query: 312 KLWKAP 317
            L  + 
Sbjct: 558 NLICSK 563

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	321
3kd8_A	399	2,3-bisphosphoglycerate-independent phosphoglycera	99.97
2zkt_A	412	2,3-bisphosphoglycerate-independent phosphoglycer	99.91
2i09_A	403	Phosphopentomutase; structural genomics, target T1	98.5
3igz_B	561	Cofactor-independent phosphoglycerate mutase; glyc	98.24
3ot9_A	399	Phosphopentomutase; alkaline phosphatase like core	98.1
1o98_A	511	2,3-bisphosphoglycerate-independent phosphoglycera	97.83
1zed_A	484	Alkaline phosphatase; phosphoserine, substrate ana	97.38
3m7v_A	413	Phosphopentomutase; structural genomics, nysgrc, c	97.28
2w5v_A	375	Alkaline phosphatase; psychrophiles, cold adaptati	95.44
3lxq_A	450	Uncharacterized protein VP1736; alkaline, phosphat	95.3
3tg0_A	449	Apase, alkaline phosphatase; hydrolase; 1.20A {Esc	95.21
3nkq_A	831	Ectonucleotide pyrophosphatase/phosphodiesterase m	93.61
1ei6_A	406	Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A	88.0
3q3q_A	565	Alkaline phosphatase; hydrolase; 1.95A {Sphingomon	86.99
1k7h_A	476	Alkaline phosphatase; hydrolase, transferase, phos	86.33
3a52_A	400	Cold-active alkaline phosphatase; hydrolase; 2.20A	86.24
2w8d_A	436	Processed glycerol phosphate lipoteichoic acid SY;	84.68
2w5q_A	424	Processed glycerol phosphate lipoteichoic acid syn	83.86
3ed4_A	502	Arylsulfatase; structural genomics, PSI-2, protein	83.22
4gtw_A	823	Ectonucleotide pyrophosphatase/phosphodiesterase m	82.81

>3kd8_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; structural genomics, PSI-2, protein genomics, MCSG, glycolysis isomerase; 2.60A {Thermoplasma acidophilum} PDB: 3idd_A

Probab=99.97  E-value=2.4e-32  Score=268.32  Aligned_cols=169  Identities=14%  Similarity=0.117  Sum_probs=135.4

Q ss_pred             ccCCCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCc
Q 020825           81 WEEKSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQ  160 (321)
Q Consensus        81 ~~~~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~  160 (321)
                      ....|.+|+|.||| |+|+++|+++++++|||+++||+|+.+||+||+.||    ||++|+++++++|          ++
T Consensus       226 ~G~~p~~~~f~e~~-gl~~~~Ia~~~l~~GLa~~aGm~~~~vpgatg~~dt----~~~~k~~~~i~~l----------~~  290 (399)
T 3kd8_A          226 AGKVPAIPSFTEKN-RMKGACVVGSPWLKGLCRLLRMDVFDVPGATGTVGS----NYRGKIEKAVDLT----------SS  290 (399)
T ss_dssp             EEECCCCCCHHHHH-SSCEEEECCCHHHHHHHHHTTCEEECCCC------C----CHHHHHHHHHHHT----------TT
T ss_pred             CCcCCCCCChhHhh-CCcceEEecchHHHHHHHhCCCeeeeccCcCCCccc----cHHHHHHHHHHHH----------hh
Confidence            34688999999999 999999999999999999999999999999999997    9999999999999          67


Q ss_pred             ccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccccC
Q 020825          161 FDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKS  239 (321)
Q Consensus       161 ~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~p  239 (321)
                      |||||||++.+|.+||.|+ ++++++||.+|+.|++|++ ++++       .+++|++                      
T Consensus       291 ~d~v~~n~~~~D~~GH~gd~~~~~~aie~~D~~l~~i~~-l~~~-------~~liITa----------------------  340 (399)
T 3kd8_A          291 HDFVLVNIKATDVAGHDGNYPLKRDVIEDIDRAMEPLKS-IGDH-------AVICVTG----------------------  340 (399)
T ss_dssp             CSEEEEEEECC------CCHHHHHHHHHHHHHTTGGGGS-CTTT-------EEEEEEE----------------------
T ss_pred             CCEEEEEecCcchhhhccCHHHHHHHHHHHHHHHHHHHc-cCCC-------CEEEEEC----------------------
Confidence            9999999999999999999 8899999999999999988 6532       4667775                      


Q ss_pred             cccccccCCcccccCCCCCC----CCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHhc
Q 020825          240 SDLSALFPRQSYTMKGETPR----NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  314 (321)
Q Consensus       240 ~~~~~l~P~QSY~~kdh~tp----~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL~  314 (321)
                                     ||.||    +|+++|||++++..   ..|+|.|++|+|.++.+ |++ +|+|.++|+.++.+++
T Consensus       341 ---------------DHg~p~~~~~HT~~pVP~ii~g~---~~~~d~v~~f~E~~~~~-g~l-~~~g~~lm~~~l~~~~  399 (399)
T 3kd8_A          341 ---------------DHSTPCSFKDHSGDPVPIVFYTD---GVMNDGVHLFDELSSAS-GSL-RITSYNVMDILMQLAG  399 (399)
T ss_dssp             ---------------C-----------CCCEEEEEEET---TCCCCSCCCCSTTTGGG-SSE-EEEGGGHHHHHHHTTC
T ss_pred             ---------------CCCCCCCCCCCCCCCccEEEEcC---CCCCCCCCccCHHHHhC-CCc-cccHHHHHHHHHHhcC
Confidence                           44443    58899999999444   56899999999999766 999 9999999999998774

>2zkt_A 2,3-bisphosphoglycerate-independent phosphoglycer mutase; phosphonopyruvate decarboxylase, isomerase, structural genom NPPSFA; 2.40A {Pyrococcus horikoshii}

Probab=99.91  E-value=4.8e-24  Score=209.43  Aligned_cols=181  Identities=18%  Similarity=0.258  Sum_probs=156.4

Q ss_pred             CCCCCC-ChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcc
Q 020825           83 EKSPFQ-TISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQF  161 (321)
Q Consensus        83 ~~p~~p-~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~  161 (321)
                      ..|.+| +|.|+| ++++++|+..++.+|||+.+||+++.++|+|++.++    +++.+++++++.|          +.+
T Consensus       230 ~~p~~~~~~~~~~-~~~~~~Va~~~l~~Gigk~~gmd~~~~~g~t~~~~~----~~~~~~~~~~~~l----------~~~  294 (412)
T 2zkt_A          230 TYPNIPMKFTEQW-KVKAAGVIAVALVKGVARAVGFDVYTPEGATGEYNT----NEMAKAKKAVELL----------KDY  294 (412)
T ss_dssp             CCCCCSSCHHHHH-TCCEEEECCSHHHHHHHHHTTCEEECCTTCCSSTTC----CHHHHHHHHHHHH----------HHC
T ss_pred             CCCCCCccHHHHh-CcCcceEeeccccchhhhhcccceeeccCccCCCCC----CHHHHHHHHHHHh----------cCC
Confidence            568899 999999 999999999999999999999999999999999996    9999999999999          578


Q ss_pred             cEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccccCc
Q 020825          162 DLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSS  240 (321)
Q Consensus       162 DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~p~  240 (321)
                      ||||||+..+|.++|.|+ +++.++||++|..|+.|++.++..   +   .+++|++       ||.          +|.
T Consensus       295 d~v~v~~~~~D~~GH~~d~~~~~~aie~~D~~lg~ll~al~~~---~---~~liita-------DHG----------~p~  351 (412)
T 2zkt_A          295 DFVFLHFKPTDAAGHDNKPKLKAELIERADRMIGYILDHVDLE---E---VVIAITG-------DHS----------TPC  351 (412)
T ss_dssp             SEEEEEECHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTSCTT---T---EEEEEEC-------SSB----------CCT
T ss_pred             CEEEEcCccCChHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhC---C---CEEEEEC-------CCC----------CCC
Confidence            999999999999999999 888899999999999999887652   1   4566774       343          111


Q ss_pred             ccccccCCcccccCCCCCCCCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHhcCCcCCC
Q 020825          241 DLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLWKAPKYG  320 (321)
Q Consensus       241 ~~~~l~P~QSY~~kdh~tp~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL~kapKYG  320 (321)
                                 ..+     +|+++|||++|  +++ ..+.|.++.|+|.++.+ |+++.+.+.++++.++..|+.++|||
T Consensus       352 -----------~~~-----~Ht~~~VP~ii--~g~-~~~~~~~~~f~E~~~~~-g~l~~i~~~Di~pTil~llg~~~~~G  411 (412)
T 2zkt_A          352 -----------EVM-----NHSGDPVPLLI--AGG-GVRTDDTKRFGEREAMK-GGLGRIRGHDIVPIMMDLMNRSEKFG  411 (412)
T ss_dssp             -----------TTT-----SCBCCCEEEEE--EST-TCCCCSCCSCSHHHHTT-CTTEEEEGGGHHHHHHHHTTCCCCCC
T ss_pred             -----------CCC-----cCCCCceeEEE--EeC-CcCCCcccccccccccC-cccccccHHHHHHHHHHHhCCCccCC
Confidence                       111     57899999999  444 44568899999988654 99989999999999999999999999


Q ss_pred             C
Q 020825          321 A  321 (321)
Q Consensus       321 A  321 (321)
                      |
T Consensus       412 ~  412 (412)
T 2zkt_A          412 A  412 (412)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2i09_A Phosphopentomutase; structural genomics, target T1865, NYSGXRC, PSI, protein structure initiative; 2.00A {Streptococcus mutans} PDB: 3m7v_A

Probab=98.50  E-value=1.5e-07  Score=92.79  Aligned_cols=107  Identities=7%  Similarity=0.065  Sum_probs=71.7

Q ss_pred             CCCCCChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccC-CCCCCCChHHHHHHHHHHhccccCccccc-Ccc
Q 020825           84 KSPFQTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETS-DSLSGSPIDVVASELLKLLGLQRGKMEEV-SQF  161 (321)
Q Consensus        84 ~p~~p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~-dt~~~~~~~~~a~~al~lLg~~eg~~~~~-~~~  161 (321)
                      .|+-||+.||- .=.|.-++.+..+        .|++.-+|+|... .+   .+.+...++++++|.        . ..+
T Consensus       227 ~p~~pTvld~L-~~aG~~V~~VGKi--------~Dif~g~GiT~~~~~~---~~~~e~~d~~i~~l~--------~~~~~  286 (403)
T 2i09_A          227 SPFAPTVLNKL-ADAGVSTYAVGKI--------NDIFNGSGITNDMGHN---KSNSHGVDTLIKTMG--------LSAFT  286 (403)
T ss_dssp             CCSSCCHHHHH-HHTTCEEEEETTH--------HHHTTTTTCSEECCCC---SSHHHHHHHHHHHHH--------CSSCC
T ss_pred             CCCCCCHHHHH-HHCCCeEEEEcch--------HHeecCCCccccccCC---CCHHHHHHHHHHHHH--------hcCCC
Confidence            34456666665 2223333333332        1223334555443 33   355778888898882        2 235


Q ss_pred             -cEEEEeccCCCC-CCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 020825          162 -DLVLVHIGAGEK-TNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  217 (321)
Q Consensus       162 -DlVfvHv~a~d~-a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~  217 (321)
                       ||||+|+..+|. +||.|+ +...++||.+|+.|+.|++.++.+       .+++|++
T Consensus       287 ~dfi~vn~~~~Dm~~GH~~d~~~y~~aIe~vD~~LG~Il~aL~~~-------tllIITA  338 (403)
T 2i09_A          287 KGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDERLPEIIAAMKVD-------DLLLITA  338 (403)
T ss_dssp             SEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHTCCTT-------EEEEEEC
T ss_pred             CCEEEEEeccCCcccCcCCCHHHHHHHHHHHHHHHHHHHHhhCCC-------CEEEEec
Confidence             999999999996 999999 888889999999999999998642       3566774

>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A

Probab=98.24  E-value=1.4e-06  Score=89.07  Aligned_cols=82  Identities=9%  Similarity=0.180  Sum_probs=62.8

Q ss_pred             eecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHH
Q 020825          120 LQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQ  198 (321)
Q Consensus       120 i~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~  198 (321)
                      |..|.+|....  -..++..++++++++|        +...+||||||+..+|.+||.|+ +++.++||.+|..||.|++
T Consensus       383 ipSpkatyd~~--Pemsa~ev~d~~i~al--------~~~~~DfI~vn~an~DmvGHtGd~~a~~kAIE~vD~~LGrIl~  452 (561)
T 3igz_B          383 VPSDRVQFNEK--PRMQSAAITEAAIEAL--------KSGMYNVVRINFPNGDMVGHTGDLKATITGVEAVDESLAKLKD  452 (561)
T ss_dssp             ECCCSSCGGGS--TTTTHHHHHHHHHHHH--------HHSCCSEEEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCCccCC--CCCCHHHHHHHHHHHH--------HhCCCCEEEEecCChhhhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34455554222  1247888999999988        23569999999999999999999 8888899999999999998


Q ss_pred             hcCCCcccCcceEEEEEEe
Q 020825          199 MAQPATEVGSRLHLSVVLS  217 (321)
Q Consensus       199 ~~~~~s~~~~~~~~~lVl~  217 (321)
                      .++..   +   .+++|++
T Consensus       453 aL~e~---G---tiIIITA  465 (561)
T 3igz_B          453 AVDSV---N---GVYIVTA  465 (561)
T ss_dssp             HHHHT---T---CEEEEEC
T ss_pred             HHHhC---C---CEEEEEc
Confidence            87531   1   3566674

>3ot9_A Phosphopentomutase; alkaline phosphatase like core domain, R phosphate, ribose-1-phosphate, glucose-1,6-bisphosphate, PH transfer, isomerase; HET: TPO G16; 1.75A {Bacillus cereus} PDB: 3m8y_A* 3m8w_A* 3m8z_A* 3twz_A* 3tx0_A 3uo0_A* 3un2_A 3un3_A* 3un5_A 3uny_A

Probab=98.10  E-value=4.5e-06  Score=82.30  Aligned_cols=67  Identities=9%  Similarity=0.088  Sum_probs=55.6

Q ss_pred             ChHHHHHHHHHHhccccCcccccCcccEEEEeccCCCC-CCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEE
Q 020825          136 PIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLS  213 (321)
Q Consensus       136 ~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~-a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~  213 (321)
                      +.....+++++.|        +...+||||+|+...|. .+|.++ .....+||++|..||.|++.++..       -++
T Consensus       263 ~~~~~~d~~i~~L--------~~~~~dfv~vn~~~~D~~~GH~~~~~~Y~~aIe~vD~~IGrIL~~L~e~-------~lV  327 (399)
T 3ot9_A          263 SNMDGMDKLVDTL--------NMDFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVFAKLKED-------DLL  327 (399)
T ss_dssp             SHHHHHHHHHHHH--------TSCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHTTHHHHHHHCCTT-------EEE
T ss_pred             ChHHHHHHHHHHH--------HhCCCCEEEEEecCCcccccccCCHHHHHHHHHHHHHHHHHHHHHhhcC-------CeE
Confidence            6677888999888        22458999999999999 999999 788889999999999999998752       156


Q ss_pred             EEEe
Q 020825          214 VVLS  217 (321)
Q Consensus       214 lVl~  217 (321)
                      +|++
T Consensus       328 IiTS  331 (399)
T 3ot9_A          328 LITA  331 (399)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            6664

>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A

Probab=97.83  E-value=5.3e-05  Score=76.75  Aligned_cols=170  Identities=14%  Similarity=0.240  Sum_probs=106.5

Q ss_pred             CChhh---hhcCCcEEEEecCchhhhHhh---------hhCCeeeecC-cccccCCCCCCCChHHHHHHHHHHhccccCc
Q 020825           88 QTISD---RFMGLKAALITTNSRLKSFGD---------KLGFATLQLN-ELIETSDSLSGSPIDVVASELLKLLGLQRGK  154 (321)
Q Consensus        88 p~f~E---rymglKaA~It~~~llkg~g~---------~lG~~Vi~v~-g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~  154 (321)
                      +++.|   +. |++-..|+..+....+.-         ..|++.+-++ ...+..|....-..+..++++++.|.     
T Consensus       315 ~TL~E~L~~~-Gy~~~~IaetekyahvtfF~nGg~~~~~~G~dr~l~~sp~v~tYDl~p~ms~~ev~d~ai~~L~-----  388 (511)
T 1o98_A          315 NTIGEVLSQH-GLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEIE-----  388 (511)
T ss_dssp             SCHHHHHHHT-TCCEEEEEEGGGHHHHTTTTTTSCCSCCTTEEEEEECCCSCSSGGGSTTTTHHHHHHHHHHHHH-----
T ss_pred             chHHHHHHHC-CCcEEEEecccccCceeeecCCCcccccCCCcceecccCcccccccCccccHHHHHHHHHHHHH-----
Confidence            45444   56 899999987766655543         3455533333 11223221111244567888888882     


Q ss_pred             ccccCcccEEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhh
Q 020825          155 MEEVSQFDLVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLI  233 (321)
Q Consensus       155 ~~~~~~~DlVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~  233 (321)
                         ...+||+|+|...+|..+|.++ +....+||++|..||.+++.++..   +   .+++|++       ||-..    
T Consensus       389 ---~~kpdfi~lnf~~pD~~GH~~~~~~y~~aIe~vD~~lGrll~~Lk~~---g---TlIIiTS-------DHG~~----  448 (511)
T 1o98_A          389 ---ADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAK---G---GIAIITA-------DHGNA----  448 (511)
T ss_dssp             ---TTCCSEEEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHT---T---CEEEEEC-------SSBST----
T ss_pred             ---ccCCcEEEEeCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHC---C---CEEEEEC-------CCCcc----
Confidence               2468999999999999999988 777789999999999999886531   1   3556664       35311    


Q ss_pred             cccccCcccccccCCcccccCCCCCCCCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHh
Q 020825          234 SIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKL  313 (321)
Q Consensus       234 ~~~~~p~~~~~l~P~QSY~~kdh~tp~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL  313 (321)
                            ...  .-|      .+.....|++.+||++|  +.+. .+      +.     +.|     ...++++.++..+
T Consensus       449 ------e~m--~d~------~Gk~~t~ht~~~VPlIi--~~pg-i~------~~-----~~~-----sl~DIaPTIL~ll  495 (511)
T 1o98_A          449 ------DEV--LTP------DGKPQTAHTTNPVPVIV--TKKG-IK------LR-----DGG-----ILGDLAPTMLDLL  495 (511)
T ss_dssp             ------TCC--BCT------TSCBCCSCBCCCEEEEE--CCTT-CC------BC-----SSE-----EGGGHHHHHHHHH
T ss_pred             ------ccc--cCC------CCCcccCCCCeEEEEEE--EECC-cc------cC-----CCe-----EeHHHHHHHHHHh
Confidence                  000  001      01122258899999999  5442 22      22     112     3459999999998


Q ss_pred             cCC
Q 020825          314 WKA  316 (321)
Q Consensus       314 ~ka  316 (321)
                      |..
T Consensus       496 Gi~  498 (511)
T 1o98_A          496 GLP  498 (511)
T ss_dssp             TCC
T ss_pred             CcC
Confidence            864

>1zed_A Alkaline phosphatase; phosphoserine, substrate analog, hydro; HET: NAG PNP; 1.57A {Homo sapiens} SCOP: c.76.1.1 PDB: 1zeb_A* 1zef_A* 2glq_A* 3mk0_A* 3mk1_A* 3mk2_A* 1ew2_A*

Probab=97.38  E-value=0.00039  Score=70.03  Aligned_cols=69  Identities=10%  Similarity=0.125  Sum_probs=57.1

Q ss_pred             CCChHHHHHHHHHHhccccCcccccCcccEEEEecc--CCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcce
Q 020825          134 GSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIG--AGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRL  210 (321)
Q Consensus       134 ~~~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~--a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~  210 (321)
                      .++...+.+++|++|.         +++|.+||||+  ..|.++|.++ ..+...++.+|+.|+.+++..+++ +     
T Consensus       285 ~P~L~emt~~ai~~L~---------~~~~Gffl~veg~~iD~~gH~~d~~~~~~~~~~fD~al~~~~~~~~~~-d-----  349 (484)
T 1zed_A          285 DPSLMEMTEAALRLLS---------RNPRGFFLFVEGGRIDHGHHESRAYRALTETIMFDDAIERAGQLTSEE-D-----  349 (484)
T ss_dssp             CCCHHHHHHHHHHHHT---------TCTTCEEEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCTT-T-----
T ss_pred             CCCHHHHHHHHHHHHH---------hcCCcEEEEecccCcchhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-C-----
Confidence            4688999999999993         56899999999  8889999999 888889999999999999876542 1     


Q ss_pred             EEEEEEe
Q 020825          211 HLSVVLS  217 (321)
Q Consensus       211 ~~~lVl~  217 (321)
                      -++||+.
T Consensus       350 tLliVTA  356 (484)
T 1zed_A          350 TLSLVTA  356 (484)
T ss_dssp             EEEEEEE
T ss_pred             cEEEEec
Confidence            4666763

>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}

Probab=97.28  E-value=0.00021  Score=65.35  Aligned_cols=145  Identities=10%  Similarity=0.003  Sum_probs=83.3

Q ss_pred             EecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcccEEEEeccCCCC-CCCccc-
Q 020825          102 ITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEK-TNDDKG-  179 (321)
Q Consensus       102 It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~-a~h~G~-  179 (321)
                      +......+......++.+......++..        ........+..      ......+++++.+....+. .+|.+. 
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~~~~~~~~  309 (413)
T 3m7v_A          244 VSTYAVGKINDIFNGSGITNDMGHNKSN--------SHGVDTLIKTM------GLSAFTKGFSFTNLVDFDALYGHRRNA  309 (413)
T ss_dssp             CEEEEETTHHHHHTTTTCSEECCCCSSH--------HHHHHHHHHHH------TCSSCCSEEEEEEECHHHHHTTTTTCH
T ss_pred             ccceeccccccchhhhhhhhcccccccc--------ccchhhhhhhh------hhcccccccceecccccchhhhcchhH
Confidence            3334444566666666665555554421        11111111111      1122567888888776653 467777 


Q ss_pred             hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccccCcccccccCCcccccCCCCCC
Q 020825          180 KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPR  259 (321)
Q Consensus       180 ~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~p~~~~~l~P~QSY~~kdh~tp  259 (321)
                      +.....||++|..||.||+.++..       .++++++      | |-          .+.           .+++.   
T Consensus       310 ~~y~~~i~~~D~~vg~~l~~L~en-------tliifts------D-nG----------~~~-----------~~~~~---  351 (413)
T 3m7v_A          310 HGYRDCLHEFDERLPEIIAAMKVD-------DLLLITA------D-HG----------NDP-----------TYAGT---  351 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCTT-------EEEEEEC------S-SB----------CCT-----------TSSSS---
T ss_pred             HHHHHHHHHHHhHHHHHHHhcCCC-------CEEEEEc------c-CC----------CCC-----------CCCCC---
Confidence            677779999999999999987631       4677775      2 32          011           01111   


Q ss_pred             CCCCCCccEEEEEccccceecCCCcccChHHHHhccCCcceeHHhHHHHHHHHhc
Q 020825          260 NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGYLTIPADRFLHEVAFKLW  314 (321)
Q Consensus       260 ~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~g~I~~~~~m~evafkL~  314 (321)
                      .|++.+||++|+..+....+.+           .     ..-..++++.++..+|
T Consensus       352 ~~~~~~vp~~~~~p~~~~~~~~-----------~-----~~~~~d~~pt~~~~~g  390 (413)
T 3m7v_A          352 DHTREYVPLLAYSPSFTGNGVL-----------P-----VGHYADISATIADNFG  390 (413)
T ss_dssp             SCBCBCEEEEEECTTCSCCEEC-----------C-----CEETTHHHHHHHHHHT
T ss_pred             CCCCeeEEEEEEECCCCCCCcC-----------C-----CcEEehHHHHHHHHcC
Confidence            3778999999944432112212           1     2233589999999877

>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B

Probab=95.44  E-value=0.033  Score=52.72  Aligned_cols=133  Identities=8%  Similarity=0.090  Sum_probs=73.0

Q ss_pred             HHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCccchhh-hhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 020825          139 VVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGKAV-AHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  217 (321)
Q Consensus       139 ~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~~~k-~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~  217 (321)
                      ...+++++.|.       +..+.-|++|.....|..+|.++... ...|+.+|..||.|++.++..   + + .++|+++
T Consensus       233 ~~~~~ai~~i~-------~~~kpFfl~~~~~~~d~~~h~~~~~~~~~~v~~~D~~vG~il~~L~~~---g-n-Tlvifts  300 (375)
T 2w5v_A          233 AATDLAIQFLS-------KDNSAFFIMSEGSQIDWGGHANNASYLISEINDFDDAIGTALAFAKKD---G-N-TLVIVTS  300 (375)
T ss_dssp             HHHHHHHHHHT-------GGGCCEEEEEEETTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH---S-S-EEEEEEC
T ss_pred             HHHHHHHHHhh-------hCCCceEEEeecCcCChhhcCccHHHHHHHHHHHHHHHHHHHHHHhhC---C-C-EEEEEEC
Confidence            46678888772       11112255554444555667656333 679999999999999887541   1 2 5677775


Q ss_pred             ccccccccCCc--cchhhcccccCcccccccCCcccccCCC------CCCCCCCCCccEEEEEccccceecCCCcccChH
Q 020825          218 YGQVLEADNSN--LSVLISIDEKSSDLSALFPRQSYTMKGE------TPRNDVRHHCPMLISQWQYAVTRKDMAETFSFK  289 (321)
Q Consensus       218 yg~~~~d~~~~--~~v~~~~~~~p~~~~~l~P~QSY~~kdh------~tp~h~rdpvP~li~~~~~~~tR~D~v~~Fse~  289 (321)
                             ||..  ...-......   .....|     +..+      .+..|.+.+||+++  +.+...+      +   
T Consensus       301 -------DhG~Gg~~~g~~~~~~---~~~~~~-----~~~~K~~~~~~~~~e~g~rVP~iv--~~Pg~~~------~---  354 (375)
T 2w5v_A          301 -------DHETGGFTLAAKKNKR---EDGSEY-----SDYTEIGPTFSTGGHSATLIPVFA--YGPGSEE------F---  354 (375)
T ss_dssp             -------SCEETTCBCBEEEEEC---SSSCEE-----EEEEEECCBCSCSSEECCCEEEEE--ESTTGGG------G---
T ss_pred             -------cCCCCCcccCCCCccc---ccCccc-----ccCCccccCcCCCCCCCcEeEEEE--ECCCccc------c---
Confidence                   2411  1000000000   000000     1111      23357899999999  4442211      1   


Q ss_pred             HHHhccCCcceeHHhHHHHHHHHhcCC
Q 020825          290 DFKEHGGYLTIPADRFLHEVAFKLWKA  316 (321)
Q Consensus       290 ef~k~Gg~g~I~~~~~m~evafkL~ka  316 (321)
                             .+.+...++++.++..+|-.
T Consensus       355 -------~~~v~~~Di~pTll~~agi~  374 (375)
T 2w5v_A          355 -------IGIYENNEIFHKILKVTKWN  374 (375)
T ss_dssp             -------CEEEETTHHHHHHHHHHCCC
T ss_pred             -------CCceehhHHHHHHHHHhCCC
Confidence                   13577889999999987753

>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus}

Probab=95.30  E-value=1.8  Score=41.26  Aligned_cols=250  Identities=13%  Similarity=0.078  Sum_probs=126.3

Q ss_pred             CCCCceEEEeccCcccccC------CCchhhHHHhhhccccceecCCCCCCChhhHHHHHH-HHHHhccccccccCCCCc
Q 020825            3 DKPSKALVLYGDGLARFVE------PSHAHLHSLASKAACGFLSLPIAPPSESEEERIVRE-FAVLIDANQDYLSGIGEH   75 (321)
Q Consensus         3 dkpsr~lvl~~dG~~~~~~------~~~~hl~~~as~~~cGfL~l~~~~~~~~~~~~~~~e-~aqLld~~~~~~~~~~~~   75 (321)
                      .+|..=|+|.+|++-...-      ..-+||++||..|..=-=.+  ++++.     |..- ++-|-+.+...+-...  
T Consensus        83 ~~~pNIvlI~~Dsl~~~~l~~~g~~~~tP~ld~La~~g~~F~~~y--s~~~~-----t~ps~~sllTG~~p~~~~~~~--  153 (450)
T 3lxq_A           83 GKRKNLVILLQESLGAQFVGSLGGLPLTPNLDELMQEGWQFTQMY--ATGTR-----SVRGIEAVTTGFPPSPSRAVV--  153 (450)
T ss_dssp             SSCCEEEEEEETTCCGGGCGGGTSCSCCHHHHHHHHTSEEESSEE--CSCSS-----HHHHHHHHHTCCCCCSSCCTT--
T ss_pred             CCCCcEEEEEeCCCCcchhhhcCCCCCCccHHHHHhcCccccccc--CCCCC-----ChHHHHHHHhCCCCCCCCcee--
Confidence            4677789999999974332      35789999999885322222  12222     3332 3445555543221000  


Q ss_pred             cccccccCCCCCCChhhhh--cCCcEEEEecCch----hhhHhhhhCCeee-ecCcccccC-CCCCCCChHHHHHHHHHH
Q 020825           76 TTELKWEEKSPFQTISDRF--MGLKAALITTNSR----LKSFGDKLGFATL-QLNELIETS-DSLSGSPIDVVASELLKL  147 (321)
Q Consensus        76 ~~~~~~~~~p~~p~f~Ery--mglKaA~It~~~l----lkg~g~~lG~~Vi-~v~g~tg~~-dt~~~~~~~~~a~~al~l  147 (321)
                      .....   ....++|.+.+  -|-+-++|.+...    ..++-...||+.+ ......... ........+...+++++.
T Consensus       154 ~~~~~---~~~~~tl~~~Lk~~GY~T~~~~gg~~~~~~~~~~~~~~Gfd~~~~~~~~~~~~~~~~~g~~d~~~~~~~~~~  230 (450)
T 3lxq_A          154 KLSKS---QTGFFTIADLLKEQGYHTQFIYGGEANFDNMKTFFFGNGFDQIVEEKNYTNPGFVGSWGVSDEDLYNKADEE  230 (450)
T ss_dssp             SCSGG---GSSBCCHHHHHHHTTCEEEEEESSCTTGGGHHHHHHHTTCCEEECGGGCSSCSCEETTEECHHHHHHHHHHH
T ss_pred             ecCCC---CcccccHHHHHHhcCCCeEEEeCCCcCcCchhhhhhhCCCCEEecccccCCCcccCCCCCCHHHHHHHHHHH
Confidence            01111   12234555544  2888888855332    1234445688542 222111100 000001234556666666


Q ss_pred             hccccCcccccCcccEEEEeccCCCC-------CCC---ccchhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 020825          148 LGLQRGKMEEVSQFDLVLVHIGAGEK-------TND---DKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  217 (321)
Q Consensus       148 Lg~~eg~~~~~~~~DlVfvHv~a~d~-------a~h---~G~~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~  217 (321)
                      |.=    ..+.++.-|++||.-.+-.       ..+   .........|.++|..||.+++.++... ... ..++|+++
T Consensus       231 l~~----~~~~~~Pffl~l~~~~~H~P~~~p~~~~~~~~~~~~~y~~~v~~~D~~ig~~l~~L~~~g-~~~-nTlvI~ts  304 (450)
T 3lxq_A          231 FER----LSKGDKPFFSLVFTSSNHSPYEYPEGKIEQYDSEHMTRNNAVKYSDYALGTFFDKAKKSS-YWD-DTIFIVIA  304 (450)
T ss_dssp             HHH----HTTSSSCEEEEEECCSSSTTCCCCSSSSCCSSSSSSCHHHHHHHHHHHHHHHHHHHTTSS-SGG-GEEEEEEE
T ss_pred             HHH----hccCCCCEEEEecCCCCcCCCccCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHhCC-CcC-CeEEEEEC
Confidence            620    0122456789998755421       111   0012344589999999999999886531 122 25666675


Q ss_pred             ccccccccCCccchhhcccccCcccccccCCcccccCCCCCCCCCCCCccEEEEEccccceecCCCcccChHHHHhccCC
Q 020825          218 YGQVLEADNSNLSVLISIDEKSSDLSALFPRQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKEHGGY  297 (321)
Q Consensus       218 yg~~~~d~~~~~~v~~~~~~~p~~~~~l~P~QSY~~kdh~tp~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k~Gg~  297 (321)
                             ||-.                       .+.+|......+-++|++|+  .+. ++.   +..          .
T Consensus       305 -------DHG~-----------------------~~~~~~~~~~~~~~vP~ii~--~p~-~~~---~~~----------~  338 (450)
T 3lxq_A          305 -------DHDA-----------------------RVFGANLVPVKHFHIPALII--GKD-IQP---RKD----------D  338 (450)
T ss_dssp             -------SCCS-----------------------CCCSCCSCCGGGGEECEEEE--CTT-CCC---EEE----------C
T ss_pred             -------CCCc-----------------------ccCCCCCCccccceEeEEEE--CCC-CCC---cee----------C
Confidence                   3531                       01122222122457899994  432 211   111          1


Q ss_pred             cceeHHhHHHHHHHHhcCC
Q 020825          298 LTIPADRFLHEVAFKLWKA  316 (321)
Q Consensus       298 g~I~~~~~m~evafkL~ka  316 (321)
                      ..+-..++++.++..+|-.
T Consensus       339 ~~~s~~Di~PTll~l~G~~  357 (450)
T 3lxq_A          339 RIANNIDMPPTLLSLIGVD  357 (450)
T ss_dssp             CCEEGGGHHHHHHHHTTCC
T ss_pred             CccchhhHHHHHHHHhCCC
Confidence            2456789999999888743

>3tg0_A Apase, alkaline phosphatase; hydrolase; 1.20A {Escherichia coli} SCOP: c.76.1.1 PDB: 1b8j_A 1ed9_A 1ew8_A 1ew9_A 1ed8_A 1y6v_A 3bdg_B 1elx_A 2g9y_A 2ga3_A* 3bdh_A 3cmr_A 1elz_A 1hjk_A* 1hqa_A 1ely_A 3dyc_A 1ali_A 1alj_A 3bdf_A ...

Probab=95.21  E-value=0.022  Score=56.95  Aligned_cols=141  Identities=11%  Similarity=0.079  Sum_probs=86.8

Q ss_pred             CChHHHHHHHHHHhccccCcccccCccc--EEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceE
Q 020825          135 SPIDVVASELLKLLGLQRGKMEEVSQFD--LVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLH  211 (321)
Q Consensus       135 ~~~~~~a~~al~lLg~~eg~~~~~~~~D--lVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~  211 (321)
                      +......+++|++|.         ++.+  |+||+....|.++|.++ ......++.+|+.|+.+++.++..    . ..
T Consensus       297 PsL~eMT~kAi~~L~---------~~~~GfFl~VEg~~iD~a~H~nd~~~~~~e~~~fD~av~~a~~~~~~~----~-dT  362 (449)
T 3tg0_A          297 PTLAQMTDKAIELLS---------KNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKE----G-NT  362 (449)
T ss_dssp             CCHHHHHHHHHHHHT---------TCSSCEEEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH----S-SE
T ss_pred             CCHHHHHHHHHHHHh---------hCCCcEEEEEeccccchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcC----C-Cc
Confidence            467889999999992         3445  56677677999999999 777779999999999998875421    0 25


Q ss_pred             EEEEEeccccccccCCcc-chhhcccccCcccccc-----cC-CcccccCCCCCCCCCCCCccEEEEEccccceecCCCc
Q 020825          212 LSVVLSYGQVLEADNSNL-SVLISIDEKSSDLSAL-----FP-RQSYTMKGETPRNDVRHHCPMLISQWQYAVTRKDMAE  284 (321)
Q Consensus       212 ~~lVl~yg~~~~d~~~~~-~v~~~~~~~p~~~~~l-----~P-~QSY~~kdh~tp~h~rdpvP~li~~~~~~~tR~D~v~  284 (321)
                      ++||+.       ||+.. ++.-....+|-....+     .| .-+|....-.+-+|++..||+..++++.        .
T Consensus       363 LiiVTA-------DH~~~~~~~g~~~~~~g~~~~~~~~dg~~~~l~y~~g~~~se~HtG~dV~v~A~GP~A--------~  427 (449)
T 3tg0_A          363 LVIVTA-------DHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHA--------A  427 (449)
T ss_dssp             EEEEEC-------SSBCSCEEECTTCCCSSEEEEEECTTSSEEEEEECSCSSSSCCCBCCCEEEEEESTTG--------G
T ss_pred             EEEEeC-------CCCCcccccCCCCCCcccccccccCCCCeeeeecccCCCCCCCcCCceeeEEeecCCh--------h
Confidence            777774       47632 2222211111100000     00 1133332223347999999999966653        1


Q ss_pred             ccChHHHHhccCCcceeHHhHHHHHHHHhc
Q 020825          285 TFSFKDFKEHGGYLTIPADRFLHEVAFKLW  314 (321)
Q Consensus       285 ~Fse~ef~k~Gg~g~I~~~~~m~evafkL~  314 (321)
                      .|          -|.+.-..+.|.|+.-|+
T Consensus       428 ~f----------~G~~eqt~i~~~m~~al~  447 (449)
T 3tg0_A          428 NV----------VGLTDQTDLFYTMKAALG  447 (449)
T ss_dssp             GG----------SEEEEHHHHHHHHHHHTT
T ss_pred             hc----------CcceeccHHHHHHHHHhC
Confidence            22          235677777777776654

>3nkq_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2; lysophospholipase D, autotaxin, ENPP2, lysophosphatidic acid hydrolase; HET: NAG BMA MAN NKQ; 1.70A {Mus musculus} PDB: 3nkm_A* 3nkn_A* 3nkp_A* 3nko_A* 3nkr_A* 2xrg_A* 2xr9_A*

Probab=93.61  E-value=0.16  Score=53.86  Aligned_cols=187  Identities=11%  Similarity=0.087  Sum_probs=97.8

Q ss_pred             CCCceEEEeccCcccccCC----CchhhHHHhhhccccceecCCCCCCChhhHHHHHHHHHHhccccccccCCCCccccc
Q 020825            4 KPSKALVLYGDGLARFVEP----SHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEHTTEL   79 (321)
Q Consensus         4 kpsr~lvl~~dG~~~~~~~----~~~hl~~~as~~~cGfL~l~~~~~~~~~~~~~~~e~aqLld~~~~~~~~~~~~~~~~   79 (321)
                      ++.+-|||..||+-...-.    .-+||++||..|..--=..+..|. -+--.|+    +-+-|.|-..|-+.+-..-..
T Consensus       126 ~~pnVllI~iDglr~d~l~~~~~~tPnLd~La~~Gv~~~~~~~~~Ps-~T~Psra----SLlTG~yP~~HGI~~n~~~d~  200 (831)
T 3nkq_A          126 VRPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPT-KTFPNLY----TLATGLYPESHGIVGNSMYDP  200 (831)
T ss_dssp             CSCCEEEEEEETCCGGGGGGGGGTCHHHHHHHHHSEECSCEECCSSC-SHHHHHH----HHHHSCCHHHHSCCSSSEEET
T ss_pred             CCCcEEEEEECCCChHhhhhhccCChHHHHHHHCCccccccEecCCC-CcHHHHH----HHhcCcCccccccccCccccc
Confidence            5668999999999654332    358999999988643223323332 3222222    333455543321111100000


Q ss_pred             cccCCCCC---CChhhhhcCCcEEEEecCchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCccc
Q 020825           80 KWEEKSPF---QTISDRFMGLKAALITTNSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKME  156 (321)
Q Consensus        80 ~~~~~p~~---p~f~ErymglKaA~It~~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~  156 (321)
                      .......+   ..+..++       +.+.+ +-..++..|+.+-.+-    ..+   ...++..+..+++.|..     .
T Consensus       201 ~~~~~~~~~~~~~~~~~~-------~~g~p-iw~~~~~~G~~ta~~~----wpg---~~~~~~~v~~~~~~l~~-----~  260 (831)
T 3nkq_A          201 VFDATFHLRGREKFNHRW-------WGGQP-LWITATKQGVRAGTFF----WSV---SIPHERRILTILQWLSL-----P  260 (831)
T ss_dssp             TTTEEECSSSSGGGSGGG-------CCSCC-HHHHHHHTTCCBCCSC----CCT---TSCHHHHHHHHHHHHTS-----C
T ss_pred             cccccccccccccCCccc-------ccCCc-HHHHHHHcCCceEEEe----CCC---CCCHHHHHHHHHHHHhc-----c
Confidence            00000000   0000111       00111 2223344555432110    001   24778888888888732     2


Q ss_pred             ccCcccEEEEeccCCCCCCCccc---hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 020825          157 EVSQFDLVLVHIGAGEKTNDDKG---KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  217 (321)
Q Consensus       157 ~~~~~DlVfvHv~a~d~a~h~G~---~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~  217 (321)
                      +....+|+++|+...|.++|.-.   .+-..+|+.+|..||.|++.++.. ....+ .++||++
T Consensus       261 ~~~~P~f~~ly~~~~D~~gH~~Gp~s~ey~~al~~vD~~IG~Ll~~Lk~~-GL~dn-T~VI~TS  322 (831)
T 3nkq_A          261 DNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQL-KLHRC-VNVIFVG  322 (831)
T ss_dssp             TTTCCSEEEEEEEEEHHHHHHHCTTCGGGHHHHHHHHHHHHHHHHHHHHT-TCTTT-CEEEEEE
T ss_pred             cccCCceEEEecCCcchhccccCCCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC-EEEEEEc
Confidence            23578999999999998887532   455669999999999999887542 11222 4556664

>1ei6_A Phosphonoacetate hydrolase; zinc,; HET: TLA; 2.10A {Pseudomonas fluorescens} SCOP: c.76.1.4

Probab=88.00  E-value=1.5  Score=41.33  Aligned_cols=177  Identities=11%  Similarity=0.092  Sum_probs=90.4

Q ss_pred             CceEEEeccCccccc-C-----CCchhhHHHhhhccccceecCCCCCCChhhHHHHHHHHHHhccccccccCCCCc----
Q 020825            6 SKALVLYGDGLARFV-E-----PSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEH----   75 (321)
Q Consensus         6 sr~lvl~~dG~~~~~-~-----~~~~hl~~~as~~~cGfL~l~~~~~~~~~~~~~~~e~aqLld~~~~~~~~~~~~----   75 (321)
                      .+-|||..||+-... .     ..-+||++||..|.+.- ..+..|+ .+--.++    +-+=+.+-..|-+.+-.    
T Consensus        16 ~~vv~i~~Dgl~~~~l~~~~~~~~tP~l~~L~~~G~~~~-~~~~~Pt-~t~p~~~----sl~TG~~P~~hGi~~n~~~~~   89 (406)
T 1ei6_A           16 APTIVICVDGCEQEYINQAIQAGQAPFLAELTGFGTVLT-GDCVVPS-FTNPNNL----SIVTGAPPSVHGICGNFFFDQ   89 (406)
T ss_dssp             SCEEEEECTTCCHHHHHHHHHTTSCHHHHHGGGTSEEEE-EECCSSC-CHHHHHH----HHHHTSCHHHHCCCSSEEEET
T ss_pred             CCEEEEEeCCCCHHHHHHHHhccCCcHHHHHHhCCCccc-ccccCCC-cccccce----eeeecCCcccCCccccceecc
Confidence            468999999996432 1     13789999999997652 3333443 3322222    23334443322111110    


Q ss_pred             ----cccccccCCCCCCChhhhh--cCCcEEEEecCchhhhHhhhhCCe--eeecCccc-------------ccCCCC--
Q 020825           76 ----TTELKWEEKSPFQTISDRF--MGLKAALITTNSRLKSFGDKLGFA--TLQLNELI-------------ETSDSL--  132 (321)
Q Consensus        76 ----~~~~~~~~~p~~p~f~Ery--mglKaA~It~~~llkg~g~~lG~~--Vi~v~g~t-------------g~~dt~--  132 (321)
                          .....++.-...+++.|+.  .|.+.++|+.......+- --|++  .+.-+...             ...+..  
T Consensus        90 ~~~~~~~~~~~~~~~~~ti~~~l~~~G~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (406)
T 1ei6_A           90 ETQEEVLMNDAKYLRAPTILAEMAKAGQLVAVVTAKDKLRNLL-GHQLKGICFSAEKADQVNLEEHGVENILARVGMPVP  168 (406)
T ss_dssp             TTTEEEECCSGGGCCSCCHHHHHHHTTCCEEEEESSHHHHHHH-TTTCCSEEEESTTCSSCCHHHHSCCCHHHHHTCCCC
T ss_pred             ccCeEEEecCcccccCCCHHHHHHHcCCeEEEEccccccCcCc-cccCCcccccCCccccccccccchhHHHHHhCCCCc
Confidence                0000112222356776654  289999998755433332 23332  11110000             000000  


Q ss_pred             --CCCC-hHHHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCccc---hhhhhhhHHHHHHHHHHHHh
Q 020825          133 --SGSP-IDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKG---KAVAHDLEYINALVRVILQM  199 (321)
Q Consensus       133 --~~~~-~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~---~~k~~~IE~iD~lVg~il~~  199 (321)
                        .+.. .+...+.+++++        +....||+  ++..+|..+|.-.   .+-..+++++|..||.|++.
T Consensus       169 ~~~~~~~~~~~~~~a~~~i--------~~~~p~fl--y~~~~D~~gH~~g~~s~~~~~~l~~lD~~lg~ll~~  231 (406)
T 1ei6_A          169 SVYSADLSEFVFAAGLSLL--------TNERPDFM--YLSTTDYVQHKHAPGTPEANAFYAMMDSYFKRYHEQ  231 (406)
T ss_dssp             CSSSTHHHHHHHHHHHHHH--------HTTCCSEE--EEECCCHHHHHSCTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccchhHHHHHHHHHHHHH--------hcCCCeEE--EeCCcchhhccCCCCcHHHHHHHHHHHHHHHHHHhC
Confidence              0000 122445555555        22567774  5667888777532   45566999999999999876

>3q3q_A Alkaline phosphatase; hydrolase; 1.95A {Sphingomonas SP}

Probab=86.99  E-value=0.48  Score=48.38  Aligned_cols=55  Identities=9%  Similarity=0.160  Sum_probs=42.3

Q ss_pred             CcccEEEEeccCCCCCCCc---cchhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 020825          159 SQFDLVLVHIGAGEKTNDD---KGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  217 (321)
Q Consensus       159 ~~~DlVfvHv~a~d~a~h~---G~~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~  217 (321)
                      ...||++||+...|..+|.   .+.+....++++|+.|+.+++.++..  . . ...++|++
T Consensus       287 ~~pdll~vy~~~~D~~gH~~Gp~S~e~~~~l~~lD~~lg~Ll~~l~~~--~-~-~t~vivtS  344 (565)
T 3q3q_A          287 AQTDIISIGLSATDYVGHTFGTEGTESCIQVDRLDTELGAFFDKLDKD--G-I-DYVVVLTA  344 (565)
T ss_dssp             SSCEEEEEEECHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHHT--T-C-CEEEEEEC
T ss_pred             CCCCEEEEEcCCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHhc--C-C-CEEEEEEc
Confidence            5789999999999999886   24777789999999999999876531  1 1 24566664

>1k7h_A Alkaline phosphatase; hydrolase, transferase, phosphomonoester, extended beta SHEE triad, metal triad; HET: NAG; 1.92A {Pandalus borealis} SCOP: c.76.1.1 PDB: 1shq_A* 1shn_A*

Probab=86.33  E-value=1  Score=45.19  Aligned_cols=68  Identities=15%  Similarity=0.231  Sum_probs=52.5

Q ss_pred             CChHHHHHHHHHHhccccCcccccCccc-EEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEE
Q 020825          135 SPIDVVASELLKLLGLQRGKMEEVSQFD-LVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHL  212 (321)
Q Consensus       135 ~~~~~~a~~al~lLg~~eg~~~~~~~~D-lVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~  212 (321)
                      +......+++|++|.        ....= |+||...-.|.++|..+ ..-...++.+|..|+.+++.++++ +     -+
T Consensus       285 PsL~eMT~~ai~~L~--------~~~~GFfl~vE~~~iD~~gH~~d~~~~~~e~~~fD~av~~~~~~~~~~-d-----tL  350 (476)
T 1k7h_A          285 PTLPEMTKVAIEMLT--------KDENGFFLLVEGGRIDHMHHANQIRQSLAETLDMEEAVSMALSMTDPE-E-----TI  350 (476)
T ss_dssp             CCHHHHHHHHHHHHT--------TCTTCEEEEEEECHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCTT-T-----EE
T ss_pred             CCHHHHHHHHHHHHH--------hCCCceEEEecccccchhhccccHHHHHHHHHHHHHHHHHHHHhcCCc-C-----cE
Confidence            567788899999993        12224 88899888999999988 666669999999999999988652 2     46


Q ss_pred             EEEE
Q 020825          213 SVVL  216 (321)
Q Consensus       213 ~lVl  216 (321)
                      +||+
T Consensus       351 livT  354 (476)
T 1k7h_A          351 ILVT  354 (476)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            6666

>3a52_A Cold-active alkaline phosphatase; hydrolase; 2.20A {Shewanella}

Probab=86.24  E-value=0.5  Score=46.26  Aligned_cols=68  Identities=15%  Similarity=0.177  Sum_probs=49.2

Q ss_pred             hHHHHHHHHHHhccccCcccccCccc-EEEEeccCCCCCCCccc-hhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEE
Q 020825          137 IDVVASELLKLLGLQRGKMEEVSQFD-LVLVHIGAGEKTNDDKG-KAVAHDLEYINALVRVILQMAQPATEVGSRLHLSV  214 (321)
Q Consensus       137 ~~~~a~~al~lLg~~eg~~~~~~~~D-lVfvHv~a~d~a~h~G~-~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~l  214 (321)
                      .....++||+.|.       + ++-= |+||--...|.++|..+ ..-...+..+|+.|+.+++.++..   .  ..++|
T Consensus       199 L~emT~kAI~~L~-------k-n~~GFFLmVEgg~ID~a~H~nd~~~al~e~~~fD~AV~~al~~~~~~---~--dTLII  265 (400)
T 3a52_A          199 LSKLTQKSLDLLS-------Q-NEKGFVLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIRQH---P--DTLLV  265 (400)
T ss_dssp             HHHHHHHHHHHHT-------T-CTTCEEEEEEETHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHC---C--SEEEE
T ss_pred             HHHHHHHHHHHHH-------h-CCCCeEEEecCccCchhhhhCcHHHHHHHHHHHHHHHHHHHHHHhcC---C--CcEEE
Confidence            3556888999992       1 1122 88888888889999988 555559999999999998876531   1  25778


Q ss_pred             EEe
Q 020825          215 VLS  217 (321)
Q Consensus       215 Vl~  217 (321)
                      |+.
T Consensus       266 VTA  268 (400)
T 3a52_A          266 VTA  268 (400)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            884

>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}

Probab=84.68  E-value=28  Score=33.14  Aligned_cols=196  Identities=10%  Similarity=0.008  Sum_probs=97.4

Q ss_pred             CCCceEEEeccCcccccCC-------CchhhHHHhhh--ccccce-ecCCCCCCChhhHHHHHHHHHHhccccccccCCC
Q 020825            4 KPSKALVLYGDGLARFVEP-------SHAHLHSLASK--AACGFL-SLPIAPPSESEEERIVREFAVLIDANQDYLSGIG   73 (321)
Q Consensus         4 kpsr~lvl~~dG~~~~~~~-------~~~hl~~~as~--~~cGfL-~l~~~~~~~~~~~~~~~e~aqLld~~~~~~~~~~   73 (321)
                      ++.-=|||.+|++-...-.       .-+||++||..  |.. |= .+..+|...+    +--+++-|-+.|-..+   |
T Consensus        30 ~~pNII~I~~Dsl~~~~l~~~g~~~~~TP~ld~La~~~~g~~-F~n~ys~~~~~~~----sra~~~llTG~~p~~~---g  101 (436)
T 2w8d_A           30 EGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLAHDNETFY-FDNFFHQTGQGKT----SDAEFMMENSLYPLAQ---G  101 (436)
T ss_dssp             TTCEEEEEEETTCCGGGTTCEETTEESSHHHHHHHHSSSCEE-ESSEECCCCTTHH----HHHHHHHHHSCCCCSS---S
T ss_pred             CCCcEEEEEECCCChhhccCcCCCCcCCchHHHHHhcCCeEE-ECceeccCCCCCc----chhHHHHHhCCCCCCC---C
Confidence            4446788999998875432       35899999999  642 21 1222332111    1124554566654321   1


Q ss_pred             CccccccccCCCCCCChhhhhcCCcEEEEecCch----hhhHhhhhCCeeeec-Ccccc--cCCCCCCCChHHHHHHHHH
Q 020825           74 EHTTELKWEEKSPFQTISDRFMGLKAALITTNSR----LKSFGDKLGFATLQL-NELIE--TSDSLSGSPIDVVASELLK  146 (321)
Q Consensus        74 ~~~~~~~~~~~p~~p~f~ErymglKaA~It~~~l----lkg~g~~lG~~Vi~v-~g~tg--~~dt~~~~~~~~~a~~al~  146 (321)
                      ..-....+...+.+|..-.+- |-+-+++.+...    ...+-...||+.+-- .....  ..........+...+++++
T Consensus       102 ~~~~~~~~~~~~tl~~~Lk~~-GY~T~~~h~~~~~~~~~~~~~~~~Gfd~~~~~~~~~~~~~~~~~~g~~d~~~~~~a~~  180 (436)
T 2w8d_A          102 SVFVNKAQNTLQSVPAILKSK-NYTSATFHGNTQTFWNRNEMYKAEGIDKFFDSAYYDMNEENTKNYGMKDKPFFKESMP  180 (436)
T ss_dssp             CHHHHCTTSCCCCHHHHGGGG-TCEEEEEESSCTTGGGHHHHHHHTTCCEEECGGGSCCCGGGBCSSSBCHHHHHHHHHH
T ss_pred             cceeecCCCchhHHHHHHHHC-CCcEEEEeCCCcCcCChhhhhhcCCCceeecHhhCCCCcccccCCCCChHHHHHHHHH
Confidence            100001122233344333333 778888864321    112335678865321 11100  0000001134566778887


Q ss_pred             HhccccCcccccCcccEEEEeccCCCCCCC------------ccchh---hhhhhHHHHHHHHHHHHhcCCCcccCcceE
Q 020825          147 LLGLQRGKMEEVSQFDLVLVHIGAGEKTND------------DKGKA---VAHDLEYINALVRVILQMAQPATEVGSRLH  211 (321)
Q Consensus       147 lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h------------~G~~~---k~~~IE~iD~lVg~il~~~~~~s~~~~~~~  211 (321)
                      .|.  +     .++.-|++||.-++-..-.            .....   -...|+++|..||.+++.++... ...+ .
T Consensus       181 ~l~--~-----~~kPffl~l~~~~~H~P~~~p~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~ll~~Lk~~g-l~dn-T  251 (436)
T 2w8d_A          181 LLE--S-----LPQPFYTKFITLSNHFPFGMDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDG-LYDK-S  251 (436)
T ss_dssp             HHH--T-----SCSSEEEEEECCSSCTTCCCCTTSCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CSTT-E
T ss_pred             HHh--h-----cCCCeEEEEcCCCCcCCCCCCcccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcCC-e
Confidence            772  1     2456788898765421100            01111   13489999999999998875421 1223 4


Q ss_pred             EEEEEe
Q 020825          212 LSVVLS  217 (321)
Q Consensus       212 ~~lVl~  217 (321)
                      ++|+++
T Consensus       252 iIv~ts  257 (436)
T 2w8d_A          252 IIVMYG  257 (436)
T ss_dssp             EEEEEE
T ss_pred             EEEEEC
Confidence            566664

>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A*

Probab=83.86  E-value=30  Score=32.77  Aligned_cols=190  Identities=7%  Similarity=0.027  Sum_probs=98.4

Q ss_pred             CCCceEEEeccCcccccCC-------CchhhHHHhhh--cc-c-cceecCCCCCCChhhHHHHHHHHHHhccccccccCC
Q 020825            4 KPSKALVLYGDGLARFVEP-------SHAHLHSLASK--AA-C-GFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGI   72 (321)
Q Consensus         4 kpsr~lvl~~dG~~~~~~~-------~~~hl~~~as~--~~-c-GfL~l~~~~~~~~~~~~~~~e~aqLld~~~~~~~~~   72 (321)
                      ++.-=|||.+|++-...-.       .-+||++||..  |. . -- .+..+|...+    +-.+++-|-+.+-..+   
T Consensus        28 ~~pNIi~I~~Dsl~~~~~~~~~~~~~~TP~ld~La~~~~g~~~F~n-~y~~~~~~~~----sra~~~llTG~~~~~~---   99 (424)
T 2w5q_A           28 KKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSSGKEQFTYFPN-FFHQTGQGKT----SDSEFTMDNSLYGLPQ---   99 (424)
T ss_dssp             TTCCEEEEEETTCCGGGTTCEETTEESSHHHHHHHTTCSSCEEETT-EECCCCTTTH----HHHHHHHHHSCCCCSS---
T ss_pred             CCCeEEEEEECCCchhhccCccCCCcCCCcHHHHHhCCCceeccCc-ccccCCCCCc----chhHHHHHhcCCCCCC---
Confidence            4456789999998765432       35899999998  65 2 11 1223333231    1123555667654321   


Q ss_pred             CCccccccccCCCCCCChhhhhc---CCcEEEEecCch----hhhHhhhhCCeeeecC-ccc--ccCCCCCCCChHHHHH
Q 020825           73 GEHTTELKWEEKSPFQTISDRFM---GLKAALITTNSR----LKSFGDKLGFATLQLN-ELI--ETSDSLSGSPIDVVAS  142 (321)
Q Consensus        73 ~~~~~~~~~~~~p~~p~f~Erym---glKaA~It~~~l----lkg~g~~lG~~Vi~v~-g~t--g~~dt~~~~~~~~~a~  142 (321)
                      |.......   ....+++.+.+.   |-+-+++.....    ...+-...||+.+--. ...  ...........+...+
T Consensus       100 g~~~~~~~---~~~~~tl~~~Lk~~~GY~T~~~h~~~~~~~~~~~~~~~~Gfd~~~~~~~~~~~~~~~~~~g~~d~~~~~  176 (424)
T 2w5q_A          100 GSAFSLKG---DNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFFK  176 (424)
T ss_dssp             SCHHHHST---TSCCCCHHHHHHHHHCCEEEEEESSCTTGGGHHHHHHHHTCCEEECGGGSCCCGGGEETTEECHHHHHH
T ss_pred             CceeeecC---CchhhHHHHHHhhCCCCcEEEEECCCccccChhhhhhcCCCceEechhhcCCCccccCCCCCChHHHHH
Confidence            11000011   234566666653   667778854332    1123356788754211 110  0000000013456777


Q ss_pred             HHHHHhccccCcccccCcccEEEEeccCCCCCCCcc----------------chh---hhhhhHHHHHHHHHHHHhcCCC
Q 020825          143 ELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK----------------GKA---VAHDLEYINALVRVILQMAQPA  203 (321)
Q Consensus       143 ~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G----------------~~~---k~~~IE~iD~lVg~il~~~~~~  203 (321)
                      ++++.|.  +     .++.-|+++|.-++    |.-                ...   =...|+++|..||.+++.++..
T Consensus       177 ~a~~~l~--~-----~~~Pffl~~~~~~~----H~P~~~p~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~Lk~~  245 (424)
T 2w5q_A          177 DSANYQA--K-----MKSPFYSHLITLTN----HYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKK  245 (424)
T ss_dssp             HHHHHHH--T-----SCSSEEEEEECCSS----CTTCCCCGGGCCSCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHH--h-----cCCCeEEEeeCCCC----cCCCCCChhhccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            8887772  1     13456888886554    431                111   1237999999999999877542


Q ss_pred             cccCcceEEEEEEe
Q 020825          204 TEVGSRLHLSVVLS  217 (321)
Q Consensus       204 s~~~~~~~~~lVl~  217 (321)
                      . ...+ .++|+++
T Consensus       246 g-~~dn-TiIVf~s  257 (424)
T 2w5q_A          246 G-LYDN-SVIMIYG  257 (424)
T ss_dssp             T-CSTT-SEEEEEE
T ss_pred             C-CcCC-eEEEEEC
Confidence            1 1222 4556664

>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}

Probab=83.22  E-value=33  Score=32.79  Aligned_cols=202  Identities=14%  Similarity=0.090  Sum_probs=98.6

Q ss_pred             CCCCceEEEeccCccc-ccC------CCchhhHHHhhhccccceecCCCCCCChhhHHHHHHHHHHhccccccccCCCCc
Q 020825            3 DKPSKALVLYGDGLAR-FVE------PSHAHLHSLASKAACGFLSLPIAPPSESEEERIVREFAVLIDANQDYLSGIGEH   75 (321)
Q Consensus         3 dkpsr~lvl~~dG~~~-~~~------~~~~hl~~~as~~~cGfL~l~~~~~~~~~~~~~~~e~aqLld~~~~~~~~~~~~   75 (321)
                      .+++-=|+|.+|++-. .+.      ..-+|||+||..|..=-=.+..+|  -+--+|.    +-|-+.|-..+-+.+-.
T Consensus        25 ~~~PNIv~I~~Ddl~~~~l~~~g~~~~~TPnld~La~~G~~f~~~y~~~~--~c~PSra----sllTG~~p~~~G~~~~~   98 (502)
T 3ed4_A           25 AKQPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAP--LSSPSRA----GLLTGRMPFRTGIRSWI   98 (502)
T ss_dssp             --CCEEEEEEESSCCTTSSGGGTCSSCCCHHHHHHHHTSEEESSEECSSS--SHHHHHH----HHHHTSCGGGGTCSSCC
T ss_pred             CCCCCEEEEEeCCCCCCccccCCCCCCCCccHHHHHhCCcEecCcccCCC--ccHHHHH----HHHHcCChhhcCCcccc
Confidence            3455678999999853 221      147899999999864222332332  2323332    44556554432111100


Q ss_pred             cccccccCCCCCCChhhhhc--CCcEEEEecCchh-------hhHhhhhCCeeeec--Ccccc--------------c--
Q 020825           76 TTELKWEEKSPFQTISDRFM--GLKAALITTNSRL-------KSFGDKLGFATLQL--NELIE--------------T--  128 (321)
Q Consensus        76 ~~~~~~~~~p~~p~f~Erym--glKaA~It~~~ll-------kg~g~~lG~~Vi~v--~g~tg--------------~--  128 (321)
                      .........+..++|.|.+.  |-+-++|...-+-       .......||+..-.  .+...              .  
T Consensus        99 ~~~~~~~l~~~~~tl~~~Lk~~GY~T~~~Gkwh~~~~~~~~~~~~p~~~GFd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (502)
T 3ed4_A           99 PSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDATLDNAKERPRYGMVY  178 (502)
T ss_dssp             CTTSSCCSCTTCCCHHHHHHTTTCEEEEEEECCSSSCTTCTTSCCTTTTTCSEEEEECSSSCCCHHHHTCCSSSCBCCCC
T ss_pred             CCCCcCCCCcchhHHHHHHHHcCCeEEEEChhcCCCCCCCCCCCCcccCCCCeeeccccccccccccccccccccccccC
Confidence            00001112233556665442  7777887433220       00223356665321  00000              0  


Q ss_pred             ----------CCCCCCCChHHHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCccch------------------
Q 020825          129 ----------SDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDKGK------------------  180 (321)
Q Consensus       129 ----------~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G~~------------------  180 (321)
                                ......-..+..++++++.|.  +   .+.++.-|++||..++...-+...+                  
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~--~---~~~~~PfFl~~~~~~pH~P~~~p~~~~~~y~~~~~~~~~~~p~  253 (502)
T 3ed4_A          179 PTGWLRNGQPTPRADKMSGEYVSSEVVNWLD--N---KKDSKPFFLYVAFTEVHSPLASPKKYLDMYSQYMSAYQKQHPD  253 (502)
T ss_dssp             CCSCEETTEECCCCSSCHHHHHHHHHHHHHH--T---CCSSCCEEEEEECCTTSSSCCCCHHHHHTTGGGBCHHHHHSTT
T ss_pred             ccccccCCcccCCCCcccHHHHHHHHHHHHH--h---CCCCCCEEEEeCCCCCcCCCCCCHHHHHHhhhhhhhhcccCcc
Confidence                      000000123456777787772  1   1224567999998777433111000                  


Q ss_pred             ---------------hhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEe
Q 020825          181 ---------------AVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLS  217 (321)
Q Consensus       181 ---------------~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~  217 (321)
                                     .=...|+++|..||.|++.++... ...+ .++|+++
T Consensus       254 ~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~ll~~L~~~g-~~dn-TlVIftS  303 (502)
T 3ed4_A          254 LFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMG-EEDN-TIVIFTS  303 (502)
T ss_dssp             BCGGGCTTSCCCBSHHHHHHHHHHHHHHHHHHHHHHHTT-CGGG-EEEEEEE
T ss_pred             ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHcC-CcCC-eEEEEeC
Confidence                           012479999999999998876431 2223 5667775

>4gtw_A Ectonucleotide pyrophosphatase/phosphodiesterase member 2, alkaline phosphodiesterase...; bone mineralization, hydrolase; HET: NAG BMA MAN AMP; 2.70A {Mus musculus} PDB: 4gtx_A* 4gty_A* 4gtz_A* 4b56_A*

Probab=82.81  E-value=1.1  Score=47.09  Aligned_cols=63  Identities=13%  Similarity=0.218  Sum_probs=49.0

Q ss_pred             CChHHHHHHHHHHhccccCcccccCcccEEEEeccCCCCCCCcc---chhhhhhhHHHHHHHHHHHHhcCC
Q 020825          135 SPIDVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKTNDDK---GKAVAHDLEYINALVRVILQMAQP  202 (321)
Q Consensus       135 ~~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a~h~G---~~~k~~~IE~iD~lVg~il~~~~~  202 (321)
                      ..++..+.++++.|..     .+.+..+|+++|...+|.++|.-   ..+-..+|+++|..||.|++.++.
T Consensus       244 ~~~~~~~~~~~~~l~~-----~~~~~P~fl~~y~~~pD~~gH~~Gp~s~e~~~~i~~vD~~IG~ll~~L~~  309 (823)
T 4gtw_A          244 VPFEERILAVLEWLQL-----PSHERPHFYTLYLEEPDSSGHSHGPVSSEVIKALQKVDRLVGMLMDGLKD  309 (823)
T ss_dssp             SCHHHHHHHHHHHTTS-----CTTTCCSEEEEEECTTHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHh-----cccCCCeEEEECCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4778888899988842     33467899999999999887642   245566999999999999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	321
d2i09a1	283	Phosphopentomutase DeoB {Streptococcus mutans [Tax	94.95
d1j8yf2	211	GTPase domain of the signal sequence recognition p	80.95

>d2i09a1 c.76.1.5 (A:2-107,A:227-403) Phosphopentomutase DeoB {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: Alkaline phosphatase-like
superfamily: Alkaline phosphatase-like
family: DeoB catalytic domain-like
domain: Phosphopentomutase DeoB
species: Streptococcus mutans [TaxId: 1309]

Probab=94.95  E-value=0.094  Score=41.34  Aligned_cols=59  Identities=8%  Similarity=0.066  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHhccccCcccccCcccEEEEeccCCCCC-CCccc-hhhhhhhHHHHHHHHHHHHhcCC
Q 020825          138 DVVASELLKLLGLQRGKMEEVSQFDLVLVHIGAGEKT-NDDKG-KAVAHDLEYINALVRVILQMAQP  202 (321)
Q Consensus       138 ~~~a~~al~lLg~~eg~~~~~~~~DlVfvHv~a~d~a-~h~G~-~~k~~~IE~iD~lVg~il~~~~~  202 (321)
                      ....+++++.+.      ....+..++++|+...+.. +|... ..-...|+++|..||.|++.++.
T Consensus       150 ~~~~d~~~~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~y~~~i~~~D~~iG~il~~L~~  210 (283)
T d2i09a1         150 SHGVDTLIKTMG------LSAFTKGFSFTNLVDFDALYGHRRNAHGYRDCLHEFDERLPEIIAAMKV  210 (283)
T ss_dssp             HHHHHHHHHHHH------CSSCCSEEEEEEECHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred             HHHHHHHHHHHH------hcCCCcceeecccCCcccccCcCccHHHHHHHHHHHHHHhhhhhhhhcc
Confidence            334556666552      1223557888998776654 33322 44455899999999999998764

>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal sequence recognition protein Ffh
species: Archaeon Acidianus ambivalens [TaxId: 2283]

Probab=80.95  E-value=6.1  Score=33.07  Aligned_cols=152  Identities=14%  Similarity=0.117  Sum_probs=81.1

Q ss_pred             cCCcEEEEec-------CchhhhHhhhhCCeeeecCcccccCCCCCCCChHHHHHHHHHHhccccCcccccCcccEEEEe
Q 020825           95 MGLKAALITT-------NSRLKSFGDKLGFATLQLNELIETSDSLSGSPIDVVASELLKLLGLQRGKMEEVSQFDLVLVH  167 (321)
Q Consensus        95 mglKaA~It~-------~~llkg~g~~lG~~Vi~v~g~tg~~dt~~~~~~~~~a~~al~lLg~~eg~~~~~~~~DlVfvH  167 (321)
                      +|.|-++||.       .+.++.+|+.+|..+..++.-         .+....+.+++...        ...++|+|||=
T Consensus        39 ~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~---------~~~~~~~~~a~~~~--------~~~~~d~IlID  101 (211)
T d1j8yf2          39 KGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGE---------KDVVGIAKRGVEKF--------LSEKMEIIIVD  101 (211)
T ss_dssp             TTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTC---------CCHHHHHHHHHHHH--------HHTTCSEEEEE
T ss_pred             CCCceEEEEeeccccchhHHHHHhccccCcceeecccc---------hhhhHHHHHHHHHh--------hccCCceEEEe
Confidence            4889999986       577899999999998653311         25555556655443        12678999986


Q ss_pred             ccCCCCCCCccchhhhhhhHHHHHHHHHHHHhcCCCcccCcceEEEEEEeccccccccCCccchhhcccccCcccccccC
Q 020825          168 IGAGEKTNDDKGKAVAHDLEYINALVRVILQMAQPATEVGSRLHLSVVLSYGQVLEADNSNLSVLISIDEKSSDLSALFP  247 (321)
Q Consensus       168 v~a~d~a~h~G~~~k~~~IE~iD~lVg~il~~~~~~s~~~~~~~~~lVl~yg~~~~d~~~~~~v~~~~~~~p~~~~~l~P  247 (321)
                      .     +|-....+....++.+..+...+    ++.       ...+|++-....++  . ..+......        .+
T Consensus       102 T-----aGr~~~~~~~~~~~el~~~~~~~----~~~-------~~~LVl~a~~~~~~--~-~~~~~~~~~--------~~  154 (211)
T d1j8yf2         102 T-----AGRHGYGEEAALLEEMKNIYEAI----KPD-------EVTLVIDASIGQKA--Y-DLASKFNQA--------SK  154 (211)
T ss_dssp             C-----CCSCCTTCHHHHHHHHHHHHHHH----CCS-------EEEEEEEGGGGGGH--H-HHHHHHHHH--------CT
T ss_pred             c-----CCcCccchhhHHHHHHHHHHhhc----CCc-------eEEEEEecccCcch--H-HHHhhhhcc--------cC
Confidence            3     33211122222344444444433    331       34667753321111  0 001110010        11


Q ss_pred             Cc--ccccCCCCCC------CCCCCCccEEEEEccccceecCCCcccChHHHHh
Q 020825          248 RQ--SYTMKGETPR------NDVRHHCPMLISQWQYAVTRKDMAETFSFKDFKE  293 (321)
Q Consensus       248 ~Q--SY~~kdh~tp------~h~rdpvP~li~~~~~~~tR~D~v~~Fse~ef~k  293 (321)
                      ..  -+|.-|....      -=.+-..|+.....++   |+|+-+.|+-+.+.+
T Consensus       155 ~~~lI~TKlDet~~~G~~l~~~~~~~lPi~~it~Gq---~v~DL~~~~~~~l~~  205 (211)
T d1j8yf2         155 IGTIIITKMDGTAKGGGALSAVAATGATIKFIGTGE---KIDELEVFNPRRFVA  205 (211)
T ss_dssp             TEEEEEECTTSCSCHHHHHHHHHTTTCCEEEEECSS---STTCEEECCHHHHHH
T ss_pred             cceEEEecccCCCcccHHHHHHHHHCcCEEEEeCCC---CcccCccCCHHHHHH
Confidence            11  1344455443      0122456888877755   568899999888776