Citrus Sinensis ID: 020860

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Protein Sequence
MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGLC
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHcccccccccccEEEEEcHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEEEEEEEEcccccccccccEEEEEEcEEEEEEEEEEEEEcEEEccEEEcccEEEEEEEcEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEEEEEEcccEEEccEEEEEEEEEEEEcccccccccccccccccccccccccEEEEEEcHHHHHHHHHHHHHccccEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHHHHHHHHcccccccccccEEEcEEEEEEEEEEEEEEEEEEcccccEEccccEEEEEEEcEEEEEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEccccccEEEEEcccccEEcEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccEEEEEEEcccccccccccEEEcccEEEEccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHccccEEEEEccccc
Coil and Loop (DISEMBL)
mgcfikfssPAILFMFLSLLliptsahvqvneGGYISAVISKKGLDFFKNYLInkatssiiplelpdiekskkiplIGKVHMALSNIIIYSVEidssyvetgdpdllLAVSgatadcgmnweysygswllptisdsgaATVLVEGLEVGLTVSLKEQGGIVKVILVDCgshvrdisikvDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFqslpkqipvsdiasmntsfvrspvlsdssvEVEINGLFTAISGTSMLNYYHkgfessascsspakmigIQLNENVFSSGALVYFNSGTVVFLWLQLGLC
Flexible Loop (DISEMBL)
MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKAtssiiplelpdieKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTvslkeqggIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRspvlsdssvEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGLC
Low Complexity Region (SEG)
MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAAtvlveglevgltvslKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGLC
Disordered region (IsUnstruct)
**CFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGL*
Disordered Region (DISOPRED)
*******SSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYH*************KMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGLC
Disordered Region (DISEMBL)
MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGLC
Disordered Region (DISPRO)
**CFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGLC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGLC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	320	2.2.26 [Sep-21-2011]
Q9MAU5	488	Putative BPI/LBP family p	yes	no	0.871	0.571	0.457	4e-70
Q8VYC2	515	Putative BPI/LBP family p	no	no	0.906	0.563	0.423	1e-61
P17213	487	Bactericidal permeability	yes	no	0.884	0.581	0.219	4e-12
Q6AXU0	482	Bactericidal permeability	yes	no	0.728	0.483	0.247	6e-12
P18428	481	Lipopolysaccharide-bindin	no	no	0.806	0.536	0.219	1e-09
Q2TBI0	481	Lipopolysaccharide-bindin	no	no	0.828	0.550	0.202	6e-09
Q28739	445	Bactericidal permeability	no	no	0.793	0.570	0.213	7e-08
P55065	493	Phospholipid transfer pro	yes	no	0.790	0.513	0.207	7e-08
P17453	482	Bactericidal permeability	no	no	0.853	0.566	0.226	8e-08
P17454	482	Lipopolysaccharide-bindin	no	no	0.812	0.539	0.190	1e-07

>sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970 OS=Arabidopsis thaliana GN=At1g04970 PE=2 SV=1

 Score =  265 bits (676), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 128/280 (45%), Positives = 192/280 (68%), Gaps = 1/280 (0%)

Query: 35  YISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEI 94
           + S ++S+ GLDF KN L+NKA +SIIPL++P IEKS KIP +G + + +SN+ IY +++
Sbjct: 28  FTSVLVSQNGLDFVKNLLVNKAIASIIPLQIPRIEKSMKIPFLGGIDVVVSNLTIYELDV 87

Query: 95  DSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLP-TISDSGAATVLVEGLEVGLTVS 153
            SSYV+ G+  +++  SG T +  MNW YSY +WL P  ISD G A+V V+G+E+GL++ 
Sbjct: 88  ASSYVKLGETGVVIVASGTTCNLSMNWHYSYSTWLPPIEISDQGIASVQVQGMEIGLSLG 147

Query: 154 LKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISEL 213
           LK   G +K+ L +CG HV DI+I+++GGASW YQ +  AF+ +I S+VES + KK++E 
Sbjct: 148 LKSDEGGLKLSLSECGCHVEDITIELEGGASWFYQGMVNAFKDQIGSSVESTIAKKLTEG 207

Query: 214 ITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHK 273
           ++ LDS  QSLPK+IPV D A +N +F   P+L +SS+  EI+GLFT      +L  + K
Sbjct: 208 VSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNSSITFEIDGLFTKGETNQVLKSFFK 267

Query: 274 GFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFL 313
              S   C   +KM+GI ++E VF+S A +Y+N+  V ++
Sbjct: 268 KSVSLVICPGNSKMLGISVDEAVFNSAAALYYNADFVQWV 307

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYC2|Y2070_ARATH Putative BPI/LBP family protein At3g20270 OS=Arabidopsis thaliana GN=At3g20270 PE=2 SV=1

 Score =  236 bits (603), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 192/321 (59%), Gaps = 31/321 (9%)

Query: 6   KFSSPAILFMFLSLLLIP-----------TSAHVQVNEGGYISAVISKKGLDFFKNYLIN 54
           KFS P+ LF FL + L+            +S   Q N GG+IS ++S+ GL+F K+YLI 
Sbjct: 26  KFSYPSTLFFFLEMALMKVMTILVLFVSVSSTLAQSNNGGHISIIVSETGLEFAKDYLIK 85

Query: 55  KATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGAT 114
           K  ++ +PL+LPDIE   KIPLIGKV M LSNI I +V + SS +ET    ++L+V GAT
Sbjct: 86  KVITTTLPLQLPDIENKVKIPLIGKVRMGLSNIQIDAVHVQSSKMETRKDGIILSVLGAT 145

Query: 115 ADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRD 174
           A+  M+W Y+Y +     ISD G A+V V+G+ V +T +L    G +K+   +    V++
Sbjct: 146 ANLSMDWSYTYRASFFE-ISDHGDASVEVKGMNVRITATLVNDNGSLKIASRENDCTVKN 204

Query: 175 ISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIA 234
           I I ++GGASWLYQ + +AF+  I S VE  V+ KI E + KLDS  QSLPKQ  + D A
Sbjct: 205 IDIHINGGASWLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSA 264

Query: 235 SMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPA--------K 286
           ++N +F  +PVL +SSVEV+INGLF             KG +   + S  +        +
Sbjct: 265 AVNLTFTGNPVLGNSSVEVDINGLFMP-----------KGDDIKVAGSRSSSFFGGVNKR 313

Query: 287 MIGIQLNENVFSSGALVYFNS 307
           M+ I + E VF+S  LVYFN+
Sbjct: 314 MVTISVEEGVFNSATLVYFNA 334

Arabidopsis thaliana (taxid: 3702)

>sp|P17213|BPI_HUMAN Bactericidal permeability-increasing protein OS=Homo sapiens GN=BPI PE=1 SV=4

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 134/296 (45%), Gaps = 13/296 (4%)

Query: 19  LLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIG 78
           L+ I T+    VN G  +   IS+KGLD+            +  +++PD   S KI  +G
Sbjct: 21  LVAIGTAVTAAVNPG--VVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLG 78

Query: 79  KVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGA 138
           K H +  ++ I   ++ SS +    P++ L  S + A+  ++ ++      L     SG 
Sbjct: 79  KGHYSFYSMDIREFQLPSSQISM-VPNVGLKFSISNANIKISGKWKAQKRFL---KMSGN 134

Query: 139 ATVLVEGLEVGLTVSL--KEQGGIVKVILVDCGSHVRDISIKV-DGGASWLYQALFEAFE 195
             + +EG+ +   + L      G   +    C SH+  + + +      WL Q   +  E
Sbjct: 135 FDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIE 194

Query: 196 GKIKSAVESAVTKKISELI-TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVE 254
             +++ + S V +K++  + ++L   FQ+LP    +  +A +N   V  P  +  +++V+
Sbjct: 195 SALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQ 254

Query: 255 INGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
           + G F + +  +   +     E  A+     +M+ + L++  F++  LVY  +G +
Sbjct: 255 MKGEFYSENHHNPPPFAPPVMEFPAAHD---RMVYLGLSDYFFNTAGLVYQEAGVL 307

The cytotoxic action of BPI is limited to many species of Gram-negative bacteria; this specificity may be explained by a strong affinity of the very basic N-terminal half for the negatively charged lipopolysaccharides that are unique to the Gram-negative bacterial outer envelope. Has antibacterial activity against the Gram-nagative bacterium P.aeruginosa, this activity is inhibited by LPS from P.aeruginosa.

Homo sapiens (taxid: 9606)

>sp|Q6AXU0|BPI_RAT Bactericidal permeability-increasing protein OS=Rattus norvegicus GN=Bpi PE=2 SV=1

 Score = 72.0 bits (175), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 18/251 (7%)

Query: 17  LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
           L+LL I  +A     + G++ A IS+KGLDF     + +    ++ + +PD     KI  
Sbjct: 14  LALLAIVGTALTAATDPGFV-ARISQKGLDFVCQESMVELQKELLAISIPDFSGDFKIKH 72

Query: 77  IGKVHMALSNIIIYSVEIDSSYVETGDPD-LLLAVSGATADCGMNWEYSYGSWLLPTISD 135
           +GK      ++ +    I    ++    D L L+++ A+      W+Y         +  
Sbjct: 73  LGKGTYEFYSMAVEGFHIPDPQIKLLPSDGLQLSITSASIKISGRWKYRKN-----ILKA 127

Query: 136 SGAATVLVEGLEVGLTVSL-KEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEA 193
           SG   + ++G+ +   + L  +  G + +    C SH+  + IKV G    WL Q     
Sbjct: 128 SGNFQLSIQGVSIIADLILGNDPSGRITITCSTCDSHINSVRIKVSGSMLGWLIQ----L 183

Query: 194 FEGKIKSAVESAVTKKISELI-----TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSD 248
           F  KI+++++  + KKI +++      KL    ++LP    V DI S++ S +  P+ +D
Sbjct: 184 FHRKIETSLKKTIYKKICKIVRNSVSAKLQPYVKTLPVVAKVDDITSIDYSLLAPPMTTD 243

Query: 249 SSVEVEINGLF 259
             +E ++ G F
Sbjct: 244 KFLEGQLRGEF 254

The cytotoxic action of BPI is limited to many species of Gram-negative bacteria; this specificity may be explained by a strong affinity of the very basic N-terminal half for the negatively charged lipopolysaccharides that are unique to the Gram-negative bacterial outer envelope.

Rattus norvegicus (taxid: 10116)

>sp|P18428|LBP_HUMAN Lipopolysaccharide-binding protein OS=Homo sapiens GN=LBP PE=1 SV=3

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 29/287 (10%)

Query: 38  AVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSS 97
           A I+ KGL +     +    S ++ + LPD     +IP +G+      ++ I+S E+  S
Sbjct: 32  ARITDKGLQYAAQEGLLALQSELLRITLPDFTGDLRIPHVGRGRYEFHSLNIHSCELLHS 91

Query: 98  YVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPT--ISDSGAATVLVEGLEVGLTVSL- 154
            +        +   G +     +     G W +        G+  V V+G+ + + + L 
Sbjct: 92  ALRP------VPGQGLSLSISDSSIRVQGRWKVRKSFFKLQGSFDVSVKGISISVNLLLG 145

Query: 155 KEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELI 214
            E  G   V    C S + D+ + + G   WL        E K +  +ES + + I + +
Sbjct: 146 SESSGRPTVTASSCSSDIADVEVDMSGDLGWLLNLFHNQIESKFQKVLESRICEMIQKSV 205

Query: 215 -TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHK 273
            + L    Q+LP    +   A ++ S V +P  +   +EV   G             +H+
Sbjct: 206 SSDLQPYLQTLPVTTEIDSFADIDYSLVEAPRATAQMLEVMFKG-----------EIFHR 254

Query: 274 GFES-----SASCSSPA---KMIGIQLNENVFSSGALVYFNSGTVVF 312
              S     +A  S P    KM+   +++ VF++ +LVY   G + F
Sbjct: 255 NHRSPVTLLAAVMSLPEEHNKMVYFAISDYVFNTASLVYHEEGYLNF 301

Binds to the lipid A moiety of bacterial lipopolysaccharides (LPS), a glycolipid present in the outer membrane of all Gram-negative bacteria. The LBP/LPS complex seems to interact with the CD14 receptor.

Homo sapiens (taxid: 9606)

>sp|Q2TBI0|LBP_BOVIN Lipopolysaccharide-binding protein OS=Bos taurus GN=LBP PE=2 SV=1

 Score = 62.0 bits (149), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 11/276 (3%)

Query: 40  ISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYV 99
           I+ +GL++     +    S +  + LPD     +I   G V     ++ I S ++  S +
Sbjct: 34  ITDQGLEYVAQEELLALQSKLHKVTLPDFNGDVRIKHFGSVDYRFHSLNIQSCKLLGSAL 93

Query: 100 ET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-EQ 157
           +   +  L  ++S +      +W+       L      G+  V V+G+ + + + L  E 
Sbjct: 94  KLLPNQGLHFSISDSFIQVTGDWKVRKRILRL-----DGSFDVKVKGITISVNLLLDSEP 148

Query: 158 GGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELIT-K 216
            G  KV +  C SH+RD+ + + G   WL        E + +  +ES + + I + +T +
Sbjct: 149 SGRPKVAVSSCSSHIRDVEVHISGDLGWLLNLFHNQIESRFRRVLESKICEIIEDSVTSE 208

Query: 217 LDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFE 276
           L    Q+LP    +  +A ++ S + +P  +   ++V   G   +      + +      
Sbjct: 209 LQPYLQTLPVTTEIDHLAGLDYSLMGAPQATAQMLDVMFKGEIFSRDDRFPVAFLAPVMN 268

Query: 277 SSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVF 312
                S   +M+   +++  F++ +LVY  +G + F
Sbjct: 269 LPEEHS---RMVYFAISDYAFNTASLVYHKAGFLNF 301

Binds to the lipid A moiety of bacterial lipopolysaccharides (LPS), a glycolipid present in the outer membrane of all Gram-negative bacteria. The LBP/LPS complex seems to interact with the CD14 receptor.

Bos taurus (taxid: 9913)

>sp|Q28739|BPI_RABIT Bactericidal permeability-increasing protein (Fragment) OS=Oryctolagus cuniculus GN=BPI PE=2 SV=1

 Score = 58.5 bits (140), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 123/276 (44%), Gaps = 22/276 (7%)

Query: 42  KKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET 101
           +KGLD+     +      +  + +PD+    K+   GK H    ++++ S ++ +  +  
Sbjct: 1   QKGLDYACQQGVAVLQKELEKIRIPDVSGKFKLRPFGKGHYNFHSLVVRSFQLPNPQIRL 60

Query: 102 GDPD--LLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKE--Q 157
             P+  L +++S A    G  W+   G      I   G   + VEG+ +   + L     
Sbjct: 61  -QPNVGLRVSISNANVRIGGRWKARKG-----FIKVRGKFDLSVEGVSISADLKLGSVPA 114

Query: 158 GGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELIT-- 215
            G   V    C S++    ++    ASW      + F  +I+S++ + +  KI +++T  
Sbjct: 115 SGRATVTCSSCSSNINRARLRSQ--ASW--GGWLKLFHKRIESSLRNTMNSKICQVLTSS 170

Query: 216 ---KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYH 272
              KL    ++LP +  +  +A ++ S V  P  +  S+++++ G F  ++  S   +  
Sbjct: 171 VSSKLQPYVETLPLKERLDSVAGIDYSLVAPPRATADSLDMQLKGEFYNVARPSPPPFM- 229

Query: 273 KGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
                 A  S   +MI + +++ +F++ ALVY  +G
Sbjct: 230 --PPPMAIPSLHDRMIYLAISDYLFNTAALVYQQAG 263

The cytotoxic action of BPI is limited to many species of Gram-negative bacteria; this specificity may be explained by a strong affinity of the very basic N-terminal half for the negatively charged lipopolysaccharides that are unique to the Gram-negative bacterial outer envelope.

Oryctolagus cuniculus (taxid: 9986)

>sp|P55065|PLTP_MOUSE Phospholipid transfer protein OS=Mus musculus GN=Pltp PE=1 SV=1

 Score = 58.2 bits (139), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 26/279 (9%)

Query: 40  ISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYV 99
           ++   LD  K   +      +  + +PD+  +K     G  +  +S++ +  + + SS +
Sbjct: 26  VTSAALDLVKQEGLRFLEQELETITIPDVYGAK-----GHFYYNISDVRVTQLHLISSEL 80

Query: 100 E-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEV--GLTVSLKE 156
               D DLLL +S A+   G+++      W L    D G      EG+ +  GL +S ++
Sbjct: 81  HFQPDQDLLLNISNAS--LGLHFRRQLLYWFL---YDGGYINASAEGVSIRTGLQLS-QD 134

Query: 157 QGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITK 216
             G +KV  V C + V  +++   G     ++ ++  F   I S +   + ++I  ++  
Sbjct: 135 SSGRIKVSNVSCEASVSKMNMAFGGT----FRRMYNFFSTFITSGMRFLLNQQICPVLYH 190

Query: 217 -----LDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYY 271
                L+S+  ++P +  V D+  ++ S ++ PV+S+ ++++E  G F  +      N+ 
Sbjct: 191 AGTVLLNSLLDTVPVRSSVDDLVGIDYSLLKDPVVSNGNLDMEFRGAFFPLKED---NWS 247

Query: 272 HKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
                         +M+ +  +E  F S    YF +G +
Sbjct: 248 LPNRAVEPQLEDDERMVYVAFSEFFFDSAMESYFQAGAL 286

Converts HDL into larger and smaller particles. May play a key role in extracellular phospholipid transport and modulation of hdl particles.

Mus musculus (taxid: 10090)

>sp|P17453|BPI_BOVIN Bactericidal permeability-increasing protein OS=Bos taurus GN=BPI PE=2 SV=2

 Score = 58.2 bits (139), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 132/296 (44%), Gaps = 23/296 (7%)

Query: 24  TSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMA 83
           ++A    N G  I A I++KGLD+     +      +  + +P+   + KI  +GK   +
Sbjct: 21  STAVTTTNPG--IVARITQKGLDYACQQGVLTLQKELEKITIPNFSGNFKIKYLGKGQYS 78

Query: 84  LSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVL 142
             +++I    + +S +    D  L L++  A+      W+          I   G   + 
Sbjct: 79  FFSMVIQGFNLPNSQIRPLPDKGLDLSIRDASIKIRGKWKARKN-----FIKLGGNFDLS 133

Query: 143 VEGLEV--GLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAFEGKIK 199
           VEG+ +  GL +      G   V    C S +  + I + G +  WL Q     F  +I+
Sbjct: 134 VEGISILAGLNLGYDPASGHSTVTCSSCSSGINTVRIHISGSSLGWLIQ----LFRKRIE 189

Query: 200 SAVESAVTKKISELIT-----KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVE 254
           S ++ ++T+KI E++T     KL   FQ+LP    +  +A ++ S V  P  + ++++  
Sbjct: 190 SLLQKSMTRKICEVVTSTVSSKLQPYFQTLPVTTKLDKVAGVDYSLVAPPRATANNLDWL 249

Query: 255 INGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
           + G F +++  S   +      + A  S   +M+ + ++E  F++   VY  +G +
Sbjct: 250 LKGEFFSLAHRSPPPFAP---PALAFPSDHDRMVYLGISEYFFNTAGFVYQKAGAL 302

The cytotoxic action of BPI is limited to many species of Gram-negative bacteria; this specificity may be explained by a strong affinity of the very basic N-terminal half for the negatively charged lipopolysaccharides that are unique to the Gram-negative bacterial outer envelope.

Bos taurus (taxid: 9913)

>sp|P17454|LBP_RABIT Lipopolysaccharide-binding protein OS=Oryctolagus cuniculus GN=LBP PE=1 SV=2

 Score = 57.8 bits (138), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/273 (19%), Positives = 115/273 (42%), Gaps = 13/273 (4%)

Query: 40  ISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYV 99
           I+ KGL++     +      ++ + LPD +   +I   G+      ++ I   E+    +
Sbjct: 35  ITDKGLEYAAREGLLALQRKLLEVTLPDSDGDFRIKHFGRAQYKFYSLKIPRFELLRGTL 94

Query: 100 ETGDPDLLLAVSGATADCGMNWEYSYGSWLLPT--ISDSGAATVLVEGLEVGLTVSL-KE 156
                   L   G + D    + +  GSW +    +    +  + V+GL + + + L  E
Sbjct: 95  RP------LPGQGLSLDISDAYIHVRGSWKVRKAFLRLKNSFDLYVKGLTISVHLVLGSE 148

Query: 157 QGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELIT- 215
             G   V    C S ++++ + ++G    L   L    + +++  +ES + ++I E +T 
Sbjct: 149 SSGRPTVTTSSCSSDIQNVELDIEGDLEELLNLLQSQIDARLREVLESKICRQIEEAVTA 208

Query: 216 KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGF 275
            L    Q+LP    +   A ++ S + +P  +   ++V   G    +   S +++     
Sbjct: 209 HLQPYLQTLPVTTQIDSFAGIDYSLMEAPRATAGMLDVMFKGEIFPLDHRSPVDFLAPAM 268

Query: 276 ESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
               + S   +M+   +++ VF++ +L Y  SG
Sbjct: 269 NLPEAHS---RMVYFSISDYVFNTASLAYHKSG 298

Binds to the lipid A moiety of bacterial lipopolysaccharides (LPS), a glycolipid present in the outer membrane of all Gram-negative bacteria. The LBP/LPS complex seems to interact with the CD14 receptor.

Oryctolagus cuniculus (taxid: 9986)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
224056407	470	predicted protein [Populus trichocarpa]	0.925	0.629	0.598	6e-96
255580770	493	Lipopolysaccharide-binding protein precu	0.887	0.576	0.573	4e-86
359494081	501	PREDICTED: putative BPI/LBP family prote	0.953	0.608	0.498	2e-79
147854318	558	hypothetical protein VITISV_009101 [Viti	0.953	0.546	0.501	4e-79
225447199	498	PREDICTED: putative BPI/LBP family prote	0.928	0.596	0.51	9e-79
224131712	492	predicted protein [Populus trichocarpa]	0.884	0.575	0.517	1e-78
356552791	491	PREDICTED: putative BPI/LBP family prote	0.881	0.574	0.538	5e-78
356501578	480	PREDICTED: putative BPI/LBP family prote	0.881	0.587	0.520	2e-75
357494733	542	Bactericidal permeability-increasing pro	0.878	0.518	0.528	6e-75
359807236	441	uncharacterized protein LOC100808142 pre	0.934	0.678	0.471	1e-71

>gi|224056407|ref|XP_002298841.1| predicted protein [Populus trichocarpa] gi|222846099|gb|EEE83646.1| predicted protein [Populus trichocarpa]

 Score =  357 bits (915), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 179/299 (59%), Positives = 233/299 (77%), Gaps = 3/299 (1%)

Query: 12  ILFMFLSLLLIPTSA--HVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIE 69
           + F+ + L+L P +A   +Q NE GYIS ++S KG+DF K+ LINKA S+IIPL+LPDIE
Sbjct: 5   LFFLVVCLVLAPAAAAHDLQSNEEGYISLLLSNKGVDFAKDVLINKAVSTIIPLQLPDIE 64

Query: 70  KSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWL 129
           KS KIPLIGKVHM LSNI IYSV I SSYVETG+P L+L  SGATA   M W YSY +WL
Sbjct: 65  KSVKIPLIGKVHMILSNITIYSVNISSSYVETGNPGLVLVASGATASLSMKWAYSYSTWL 124

Query: 130 LPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQA 189
           +  ISDSG A+V V+G+EVGLTV+ KEQGG +++ L+DCG HV+DI+IK++GGASWLYQ 
Sbjct: 125 I-VISDSGDASVQVKGMEVGLTVAFKEQGGTLELSLLDCGCHVQDITIKLNGGASWLYQG 183

Query: 190 LFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDS 249
           + +AF+G I SAVE+A++KKI E I KLDS+ QS+PKQIP+  +A++N +FV SPVLS+S
Sbjct: 184 IVDAFQGSIGSAVENAISKKIKEEIVKLDSLLQSIPKQIPIDHVAALNATFVDSPVLSNS 243

Query: 250 SVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
            +E+EINGLFTA    ++   Y+KG +SS   + PAKMIGI L+E+VF++  LVY N+G
Sbjct: 244 FIELEINGLFTATDDFAVPRNYNKGKKSSLFYNCPAKMIGISLHEDVFNTAGLVYLNAG 302

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580770|ref|XP_002531206.1| Lipopolysaccharide-binding protein precursor, putative [Ricinus communis] gi|223529208|gb|EEF31183.1| Lipopolysaccharide-binding protein precursor, putative [Ricinus communis]

 Score =  324 bits (830), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 164/286 (57%), Positives = 217/286 (75%), Gaps = 2/286 (0%)

Query: 23  PTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHM 82
           P S H + NE G+ S V+S KG DF K  LI KA SS+IPL+LPDIEKSKKIPL+GKV++
Sbjct: 16  PVSTHRRSNEQGFTSVVLSNKGTDFAKGILIKKAVSSMIPLQLPDIEKSKKIPLLGKVNI 75

Query: 83  ALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVL 142
            LS+I+I SV I SS VETGD  ++L  SGATAD  MNW YSY  W++  +SDSG A+V 
Sbjct: 76  VLSDIMINSVSIGSSSVETGDMGIVLVASGATADLTMNWMYSYKKWVV-VLSDSGRASVQ 134

Query: 143 VEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAV 202
           V+ +EVGLTV+LKE+ G +K+ L++CG +V+DISIK+DGGASWLYQA+ +AFE  I SAV
Sbjct: 135 VKDMEVGLTVTLKEEDGTLKLSLLNCGCNVKDISIKLDGGASWLYQAVVDAFERPIASAV 194

Query: 203 ESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAI 262
           E+A++KKI E I+KLDS   SLPK+  +  +++MN +FV  PVLS+SS+E +INGLF A+
Sbjct: 195 ENAISKKIREGISKLDSRLHSLPKRFSIDHVSAMNVAFVDDPVLSNSSIEFDINGLFMAL 254

Query: 263 SGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSG 308
               + NYY+ G ++ +S + PAKMI I L+ENVF++ A VYFN+G
Sbjct: 255 DNVLIPNYYYGGIQADSS-NCPAKMIEISLHENVFNTAAAVYFNAG 299

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494081|ref|XP_002277143.2| PREDICTED: putative BPI/LBP family protein At3g20270-like [Vitis vinifera]

 Score =  302 bits (773), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 153/307 (49%), Positives = 214/307 (69%), Gaps = 2/307 (0%)

Query: 1   MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSI 60
           MG      +PA  F+ L+L  +PT A ++ +EG +IS  IS KGL F K+ L++KA SS+
Sbjct: 1   MGLSSNLMAPAAFFIVLALFSVPTDAQIKSDEG-FISVFISSKGLGFVKDLLMHKAVSSL 59

Query: 61  IPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMN 120
            P+E+  IEK  KIPL+G+V + LSNI I SV + +SYV +G   +++  SG TA+  MN
Sbjct: 60  TPIEIQPIEKIVKIPLVGQVDILLSNITILSVGVGTSYVSSGGAGVVIVASGGTANMSMN 119

Query: 121 WEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVD 180
           W+YSY +WL P ISD GAA+VLVEG+ + LT+ LK+Q G + + L+D G  V+DI +K+D
Sbjct: 120 WKYSYDTWLFP-ISDKGAASVLVEGMAMELTLGLKDQNGTLSLSLLDWGCFVKDIFVKLD 178

Query: 181 GGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSF 240
           GGA+W YQ L +AF+ +I SAVE +V+K+I E I KLDS+ QS+PK+IPV  +A++N +F
Sbjct: 179 GGATWFYQGLVDAFKEQIASAVEDSVSKRIREGIIKLDSLLQSVPKEIPVDHVAALNVTF 238

Query: 241 VRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSG 300
           V+ PV S+SS++ EINGLFTA  G      YHK   +  SC+ PAKMI + L+ENVF+S 
Sbjct: 239 VKDPVSSNSSIDFEINGLFTAKDGIPAPTNYHKKHRAPVSCTGPAKMIEMSLDENVFNSA 298

Query: 301 ALVYFNS 307
             VYF +
Sbjct: 299 TSVYFKA 305

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147854318|emb|CAN83425.1| hypothetical protein VITISV_009101 [Vitis vinifera]

 Score =  301 bits (770), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 154/307 (50%), Positives = 214/307 (69%), Gaps = 2/307 (0%)

Query: 1   MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSI 60
           MG      +PA  F+ L+L  + T A ++ +EG +IS  IS KGL F K+ L++KA SS+
Sbjct: 1   MGLSSNLMAPAAFFIVLALFSVXTDAQIKSDEG-FISVFISSKGLGFVKDLLMHKAVSSL 59

Query: 61  IPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMN 120
            P+E+  IEK  KIPL+G+V + LSNI I SV + +SYV +G   +++  SG TA+  MN
Sbjct: 60  TPIEIQPIEKIVKIPLVGQVDILLSNITILSVGVGTSYVSSGGAGVVIVASGGTANMSMN 119

Query: 121 WEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVD 180
           W+YSY +WL P ISD GAA+VLVEG+ + LT+ LK+Q G + + L+D G  V+DI +K+D
Sbjct: 120 WKYSYDTWLFP-ISDKGAASVLVEGMAMELTLGLKDQNGTLSLSLLDWGCFVKDIFVKLD 178

Query: 181 GGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSF 240
           GGA+W YQ L +AF+ +I SAVE +V+K+I E I KLDS+ QS+PK+IPV  +A++N +F
Sbjct: 179 GGATWFYQGLVDAFKEQIASAVEDSVSKRIREGIIKLDSLLQSVPKEIPVDHVAALNVTF 238

Query: 241 VRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSG 300
           V+ PV S+SS++ EINGLFTA  G    N YHK   +  SC+ PAKMI I L+ENVF+S 
Sbjct: 239 VKDPVSSNSSIDFEINGLFTAKDGIPAPNNYHKKHRAPVSCTGPAKMIEISLDENVFNSA 298

Query: 301 ALVYFNS 307
             VYF +
Sbjct: 299 TSVYFKA 305

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447199|ref|XP_002272020.1| PREDICTED: putative BPI/LBP family protein At3g20270 [Vitis vinifera] gi|297739241|emb|CBI28892.3| unnamed protein product [Vitis vinifera]

 Score =  299 bits (766), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 153/300 (51%), Positives = 212/300 (70%), Gaps = 3/300 (1%)

Query: 10  PAILFMFLSLLLI-PTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDI 68
           P++L +F++ LL  P+ AH++  E  +IS +IS +GLDF KN LI KA SS+ PL+LP I
Sbjct: 3   PSVLVIFIAFLLFTPSQAHLKSTESSFISILISSQGLDFIKNLLITKAISSLTPLQLPQI 62

Query: 69  EKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSW 128
           +KS KIP +G+V +A SNI IY +++ SS +  GD  + +  SG T +  MNW YSY +W
Sbjct: 63  KKSVKIPFLGRVDIAFSNITIYHIDVSSSNIAPGDTGVAIIASGTTCNLSMNWHYSYNTW 122

Query: 129 LLPT-ISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLY 187
            +P  ISDSG A V VEG+EVGLT+ L+ + G +K+   DCG +V DISIK+DGGASWLY
Sbjct: 123 FVPVEISDSGTAQVQVEGMEVGLTLGLENREGSMKLSAKDCGCYVEDISIKLDGGASWLY 182

Query: 188 QALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLS 247
           Q + +AFE +I SAVES +TKK+ E I KLDS  Q+LPK+IPV +IAS+N +FV  P+LS
Sbjct: 183 QGVVDAFEEQIGSAVESTITKKLKEGIIKLDSFLQALPKEIPVDNIASLNVTFVNDPLLS 242

Query: 248 DSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNS 307
           +SS+  +INGLFT  + T++  YY        SC+ P+KM+GI L+E V +S + +YFN+
Sbjct: 243 NSSIGFDINGLFTRANATTLPKYYQNS-RHPVSCTDPSKMLGISLDEAVLNSASALYFNA 301

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131712|ref|XP_002321159.1| predicted protein [Populus trichocarpa] gi|222861932|gb|EEE99474.1| predicted protein [Populus trichocarpa]

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/284 (51%), Positives = 201/284 (70%), Gaps = 1/284 (0%)

Query: 25  SAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMAL 84
           S+ +Q  +  + + VIS++GLDF KN LI +A SSIIPL+LP+I K+ K P +G VHM L
Sbjct: 19  SSQIQQEQEAFTTIVISQQGLDFLKNLLITQAISSIIPLKLPNITKTAKFPFLGYVHMLL 78

Query: 85  SNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPT-ISDSGAATVLV 143
           SNI IY +++  SYV+ GD  + +  SG T +  M+W Y Y +WL P  ISD G A+V V
Sbjct: 79  SNITIYQLQVLDSYVKPGDTGIAIIASGTTCNLSMDWSYEYNTWLFPVEISDKGHASVQV 138

Query: 144 EGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVE 203
           EG+EVGLT+ LK Q G +K+ L+DCG +V+DISIK+DGGASWLYQ + +AFE +I SAVE
Sbjct: 139 EGMEVGLTLGLKNQEGTLKLSLMDCGCYVKDISIKLDGGASWLYQGMIDAFEEQIGSAVE 198

Query: 204 SAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAIS 263
           +A+TK + E I KLD   QSLPK+IPV D AS+N +FV +P LS+SSV  +INGLFTA  
Sbjct: 199 NAITKNLGEGILKLDLFLQSLPKEIPVDDDASINVTFVDNPSLSNSSVGFDINGLFTARK 258

Query: 264 GTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNS 307
              +  YY++    S  C+ P KM+GI L+E VF+S + +Y+++
Sbjct: 259 KVPITMYYYENTLPSVLCTEPTKMLGISLDEAVFNSASALYYDA 302

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552791|ref|XP_003544746.1| PREDICTED: putative BPI/LBP family protein At3g20270-like [Glycine max]

 Score =  297 bits (760), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 154/286 (53%), Positives = 211/286 (73%), Gaps = 4/286 (1%)

Query: 31  NEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIY 90
           +E G+IS VIS KGLDF K+ LI++A +SI+  +LP IEK+ ++PL+GK  + LS+I I 
Sbjct: 22  DEEGFISVVISDKGLDFAKDILIDQAVASIVQSQLPQIEKTVQVPLVGKAKVVLSDITIN 81

Query: 91  SVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPT-ISDSGAATVLVEGLEVG 149
            ++++SS V TG+  + L VSGATAD  + W YS  SWL+P  ISDSG ATV V  L+VG
Sbjct: 82  DIQVNSSSVNTGETGIALVVSGATADLSLKWRYSVSSWLVPIGISDSGTATVKVNDLQVG 141

Query: 150 LTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKK 209
           LTV+L+ Q G +K+IL+D G HVRD+SIK+ GGA+WLYQ L +AF G I SAVE A++KK
Sbjct: 142 LTVNLRNQEGTLKLILLDSGCHVRDLSIKLHGGAAWLYQVLVDAFAGNIASAVEEAISKK 201

Query: 210 ISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLN 269
           I+E I+ LD + QSLPK IP+ + A++N SFV +PVLSDS++E+EINGLFT  +   +  
Sbjct: 202 INEGISTLDLLLQSLPKTIPLDETAALNVSFVDNPVLSDSAIELEINGLFTGRNEVLVPQ 261

Query: 270 YYHKGFESSASC--SSPAKMIGIQLNENVFSSGALVYFNSGTVVFL 313
            Y +G + SASC  SSP KMI I L+E+VF SG+LVYF + ++ ++
Sbjct: 262 AYRRGSDLSASCGDSSP-KMITISLHESVFKSGSLVYFTADSMQWI 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501578|ref|XP_003519601.1| PREDICTED: putative BPI/LBP family protein At3g20270-like [Glycine max]

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 211/288 (73%), Gaps = 6/288 (2%)

Query: 31  NEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIY 90
           +E G+IS +IS KGLDF K+ LI++A +SI+  +LP IEK+ ++PL+GK  + LS+I I 
Sbjct: 23  DEEGFISVIISDKGLDFAKDILIDQAVASIVQSQLPQIEKTVQVPLVGKAKVVLSDITIN 82

Query: 91  SVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPT-ISDSGAATVLVEGLEVG 149
            ++++SS V TG+  + L VSGATAD  +NW YS  SWL+P  ISDSG ATV V  L+VG
Sbjct: 83  HIQVNSSSVNTGETGIALVVSGATADLSLNWRYSVSSWLVPIGISDSGTATVKVNDLQVG 142

Query: 150 LTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKK 209
           LTV+L+ Q G +K+ L+D G HVRD+SIK+ GGA+WLYQ L +AF G I SAVE A++KK
Sbjct: 143 LTVNLRNQEGTLKLNLLDSGCHVRDLSIKLHGGAAWLYQVLVDAFAGNIASAVEEAISKK 202

Query: 210 ISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLN 269
           I+E I+ LD + QSLPK IP+ + A++N SF+ +PVLSDS++E+EINGLFT  +   +  
Sbjct: 203 INEGISTLDLLLQSLPKTIPLDETAALNVSFMDNPVLSDSAIELEINGLFTGRNEVLVPQ 262

Query: 270 YYHK--GFESSASC--SSPAKMIGIQLNENVFSSGALVYFNSGTVVFL 313
            Y++  G   SASC  SSP KMI I L+E+VF SG+++YF + ++ ++
Sbjct: 263 AYYRGSGLSLSASCGGSSP-KMITISLHESVFKSGSMLYFTADSMQWI 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357494733|ref|XP_003617655.1| Bactericidal permeability-increasing protein [Medicago truncatula] gi|355518990|gb|AET00614.1| Bactericidal permeability-increasing protein [Medicago truncatula]

 Score =  287 bits (734), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 149/282 (52%), Positives = 203/282 (71%), Gaps = 1/282 (0%)

Query: 25  SAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMAL 84
           S  V V+E G+IS +IS KGLDF K+ LIN+  +SI+  +LP IEKS ++PL+GK H+ L
Sbjct: 16  STSVCVHEEGFISVIISDKGLDFAKDILINQTIASIVLSQLPQIEKSVQVPLVGKAHVIL 75

Query: 85  SNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPT-ISDSGAATVLV 143
           S I I ++++ SSYVETGD  + + VSGATA+  +NW Y+  SWL+P  ISDSG ATV V
Sbjct: 76  SEITIKNIQVSSSYVETGDTGINVVVSGATANLSLNWRYTVSSWLIPIGISDSGTATVKV 135

Query: 144 EGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVE 203
           E L+VGLTV+L+ Q G +K+IL+D G  V ++SIK++GGA+WLYQ L +AF+G I SAVE
Sbjct: 136 EDLQVGLTVNLRNQEGTLKLILLDYGCDVGELSIKMNGGAAWLYQVLVDAFKGNIGSAVE 195

Query: 204 SAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAIS 263
            AV+KKI E I  LD++ Q+LPK I + + A++N SFV +PVLS+SS+E+EI+GLFT  +
Sbjct: 196 DAVSKKIREGIPTLDNLLQTLPKTISIDETAALNISFVDNPVLSNSSIELEIDGLFTERN 255

Query: 264 GTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYF 305
              +   YH+  + S S     KMI I L+ENVF S + VYF
Sbjct: 256 DVLVPQVYHRRSDISVSSGGLPKMINISLHENVFKSASEVYF 297

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807236|ref|NP_001241365.1| uncharacterized protein LOC100808142 precursor [Glycine max] gi|255641286|gb|ACU20920.1| unknown [Glycine max]

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/301 (47%), Positives = 203/301 (67%), Gaps = 2/301 (0%)

Query: 9   SPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDI 68
           +P  +   L+  L    A  Q     +IS +I++ GLDF K  L+NKA SS++ L LP+I
Sbjct: 2   APFFVLFLLASSLTQGYAQFQPKNEAFISLLITQNGLDFVKELLVNKAISSLVSLRLPNI 61

Query: 69  EKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSW 128
           EK+ KIP++G V+M LSNI IY +++ SS+V+ G+  + +  SG T +  MNW YSY +W
Sbjct: 62  EKTAKIPVVGNVYMVLSNITIYHIDVPSSHVKPGETGISIIASGVTCNLSMNWYYSYSTW 121

Query: 129 LLPT-ISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLY 187
           L+P  ISD G A V VEG+EVGLT+ L+ Q G +K+ L DCGS+V+DISIK+DGGASWLY
Sbjct: 122 LVPVKISDRGRAEVQVEGMEVGLTLGLENQEGSLKLKLKDCGSNVKDISIKLDGGASWLY 181

Query: 188 QALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLS 247
           Q + +AFE KI S VE+A+ KK+++ I+ LDS  +SLP+++PV D ASMN +FV   + S
Sbjct: 182 QGIVDAFEDKIGSTVENAIAKKLTKGISSLDSYLKSLPREVPVDDHASMNVTFVNDVLFS 241

Query: 248 DSSVEVEINGLFTAIS-GTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFN 306
           DSSV  E NGLF        +L+  HK  +    C++ +KM+GI L+E VF+S   +Y++
Sbjct: 242 DSSVGFETNGLFIERKISLPILDLDHKNSKLPILCTNSSKMLGITLDEAVFNSATALYYD 301

Query: 307 S 307
           +
Sbjct: 302 A 302

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	320
TAIR|locus:2010592	488	AT1G04970 [Arabidopsis thalian	0.921	0.604	0.42	6.2e-62
TAIR|locus:2092334	722	AT3G20270 [Arabidopsis thalian	0.925	0.409	0.418	1e-52
UNIPROTKB|I3L5U6	481	LBP "Uncharacterized protein"	0.925	0.615	0.221	1.6e-14
UNIPROTKB|F1Q3I0	483	F1Q3I0 "Uncharacterized protei	0.903	0.598	0.228	3.2e-13
UNIPROTKB|P17213	487	BPI "Bactericidal permeability	0.887	0.583	0.206	9.2e-12
RGD|1303179	482	Bpi "bactericidal/permeability	0.743	0.493	0.227	1.6e-11
UNIPROTKB|P18428	481	LBP "Lipopolysaccharide-bindin	0.925	0.615	0.227	6.1e-11
ZFIN|ZDB-GENE-070912-360	472	si:dkey-11f4.4 "si:dkey-11f4.4	0.825	0.559	0.215	2.2e-10
UNIPROTKB|F1Q3J3	485	BPI "Uncharacterized protein"	0.890	0.587	0.193	4e-10
UNIPROTKB|I3LFA0	483	BPI "Uncharacterized protein"	0.893	0.592	0.205	6.8e-10

TAIR|locus:2010592 AT1G04970 [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 126/300 (42%), Positives = 186/300 (62%)

Query:    13 LFMFL-SLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKS 71
             LF+ L S   +P+      +   + S ++S+ GLDF KN L+NKA +SIIPL++P IEKS
Sbjct:     8 LFLLLPSFFFLPSQTQ---STDSFTSVLVSQNGLDFVKNLLVNKAIASIIPLQIPRIEKS 64

Query:    72 KKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLP 131
              KIP +G + + +SN+ IY +++ SSYV+ G+  +++  SG T +  MNW YSY +WL P
Sbjct:    65 MKIPFLGGIDVVVSNLTIYELDVASSYVKLGETGVVIVASGTTCNLSMNWHYSYSTWLPP 124

Query:   132 T-ISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQAL 190
               ISD G A               K   G +K+ L +CG HV DI+I+++GGASW YQ +
Sbjct:   125 IEISDQGIASVQVQGMEIGLSLGLKSDEGGLKLSLSECGCHVEDITIELEGGASWFYQGM 184

Query:   191 FEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSS 250
               AF+ +I S+VES + KK++E ++ LDS  QSLPK+IPV D A +N +F   P+L +SS
Sbjct:   185 VNAFKDQIGSSVESTIAKKLTEGVSDLDSFLQSLPKEIPVDDNADLNVTFTSDPILRNSS 244

Query:   251 VEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
             +  EI+GLFT      +L  + K   S   C   +KM+GI ++E VF+S A +Y+N+  V
Sbjct:   245 ITFEIDGLFTKGETNQVLKSFFKKSVSLVICPGNSKMLGISVDEAVFNSAAALYYNADFV 304

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2092334 AT3G20270 [Arabidopsis thaliana (taxid:3702)]

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 131/313 (41%), Positives = 180/313 (57%)

Query:     7 FSSPAILFMFLSLLLIP-----------TSAHVQVNEGGYISAVISKKGLDFFKNYLINK 55
             FS P+ LF FL + L+            +S   Q N GG+IS ++S+ GL+F K+YLI K
Sbjct:   234 FSYPSTLFFFLEMALMKVMTILVLFVSVSSTLAQSNNGGHISIIVSETGLEFAKDYLIKK 293

Query:    56 ATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAVSGATA 115
               ++ +PL+LPDIE   KIPLIGKV M LSNI I +V + SS +ET    ++L+V GATA
Sbjct:   294 VITTTLPLQLPDIENKVKIPLIGKVRMGLSNIQIDAVHVQSSKMETRKDGIILSVLGATA 353

Query:   116 DCGMNWEYSYGSWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDI 175
             +  M+W Y+Y +     ISD G A                   G +K+   +    V++I
Sbjct:   354 NLSMDWSYTYRASFFE-ISDHGDASVEVKGMNVRITATLVNDNGSLKIASRENDCTVKNI 412

Query:   176 SIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIAS 235
              I ++GGASWLYQ + +AF+  I S VE  V+ KI E + KLDS  QSLPKQ  + D A+
Sbjct:   413 DIHINGGASWLYQGVVDAFQKMIISTVEKTVSTKIVEKMKKLDSFLQSLPKQRKIDDSAA 472

Query:   236 MNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAK-MIGIQLNE 294
             +N +F  +PVL +SSVEV+INGLF    G  +      G  SS+      K M+ I + E
Sbjct:   473 VNLTFTGNPVLGNSSVEVDINGLFMP-KGDDIKV---AGSRSSSFFGGVNKRMVTISVEE 528

Query:   295 NVFSSGALVYFNS 307
              VF+S  LVYFN+
Sbjct:   529 GVFNSATLVYFNA 541

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008289 "lipid binding" evidence=IEA;ISS

UNIPROTKB|I3L5U6 LBP "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 206 (77.6 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 68/307 (22%), Positives = 127/307 (41%)

Query:     8 SSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPD 67
             S+ A+  + L +LL      +  N G  + A I+ KGL++     +    S +  + LPD
Sbjct:     4 SAGALPSLLLGILLTSILGSLGANPG--LVARITNKGLEYVAREGVATLQSKLHEVTLPD 61

Query:    68 IEKSKKIPLIGKVHMALSNIIIYSVEI-DSSYVETGDPDLLLAVSGATADCGMNWEYSYG 126
                  KI  +G+ H    ++ I+S E+  S+        L LA+S ++      W+   G
Sbjct:    62 FNGDFKIKYMGRGHYEFHSLDIHSCELLGSTLTPLPGQGLYLAISDSSIRVKGKWKVRKG 121

Query:   127 SWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASWL 186
                L    D                    E  G   V +  C SH+ D+   + G  SWL
Sbjct:   122 ILKL----DGSFDVKVKGITISVNLLLGSESSGRPTVAVSSCSSHIDDVETHMSGDLSWL 177

Query:   187 YQALFEAFEGKIKSAVESAVTKKISELITK-LDSIFQSLPKQIPVSDIASMNTSFVRSPV 245
                     E + +  +ES + ++I +L+   L    Q++P    + ++A ++ S V +P 
Sbjct:   178 LNLFHNQIESRFRRTLESKICEEIQDLVASDLQPYLQTVPVTTEIDNLAGIDYSLVEAPR 237

Query:   246 LSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYF 305
              +   ++V I G   ++   S + +           S   +M+   +++ VF + +LVY 
Sbjct:   238 ATAQMLDVMIKGEIFSLDHRSPVGFLAPVMRLPEEHS---RMVYFAVSDYVFKTASLVYN 294

Query:   306 NSGTVVF 312
              +G + F
Sbjct:   295 EAGFLNF 301

GO:0005102 "receptor binding" evidence=IEA

GO:0002281 "macrophage activation involved in immune response" evidence=IEA

GO:0002232 "leukocyte chemotaxis involved in inflammatory response" evidence=IEA

GO:0001530 "lipopolysaccharide binding" evidence=IEA

GO:0090023 "positive regulation of neutrophil chemotaxis" evidence=IEA

GO:0071223 "cellular response to lipoteichoic acid" evidence=IEA

GO:0070891 "lipoteichoic acid binding" evidence=IEA

GO:0060265 "positive regulation of respiratory burst involved in inflammatory response" evidence=IEA

GO:0051637 "Gram-positive bacterial cell surface binding" evidence=IEA

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=IEA

GO:0050830 "defense response to Gram-positive bacterium" evidence=IEA

GO:0050829 "defense response to Gram-negative bacterium" evidence=IEA

GO:0045087 "innate immune response" evidence=IEA

GO:0044130 "negative regulation of growth of symbiont in host" evidence=IEA

GO:0043032 "positive regulation of macrophage activation" evidence=IEA

GO:0042535 "positive regulation of tumor necrosis factor biosynthetic process" evidence=IEA

GO:0034145 "positive regulation of toll-like receptor 4 signaling pathway" evidence=IEA

GO:0032760 "positive regulation of tumor necrosis factor production" evidence=IEA

GO:0032757 "positive regulation of interleukin-8 production" evidence=IEA

GO:0032755 "positive regulation of interleukin-6 production" evidence=IEA

GO:0032722 "positive regulation of chemokine production" evidence=IEA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA

GO:0032490 "detection of molecule of bacterial origin" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0015920 "lipopolysaccharide transport" evidence=IEA

GO:0006953 "acute-phase response" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

UNIPROTKB|F1Q3I0 F1Q3I0 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 196 (74.1 bits), Expect = 3.2e-13, P = 3.2e-13
 Identities = 71/311 (22%), Positives = 131/311 (42%)

Query:    10 PAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIE 69
             P  + + L LL + +      +  G++ A I++KGL++ + Y +      +  +ELPD  
Sbjct:     8 PHCVVVVLLLLAVVSGLEEGASNPGFV-ARITRKGLEYARQYGVAILKKELSTIELPDFS 66

Query:    70 KSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGDPDLLLAV-SGATADCGMNWEYSYGSW 128
              S K+  I  +      + I+  E+ +S       DL L    G  A    N+    G+W
Sbjct:    67 GSFKVSWIKIMSYEFYRLKIHDFELRNS-------DLRLCPRQGVRASLSNNYVSVSGNW 119

Query:   129 LLPT--ISDSGAAXXXXXXX-XXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGASW 185
              +     S  G                  K+Q G +   +  C + +  ISI + G  SW
Sbjct:   120 KIKKAFFSFDGTFEMKVDDICISAFLNLGKDQSGRLTASMAHCNNSIGHISIDISGKLSW 179

Query:   186 LYQALFEAFEGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSP 244
             +     E  E K K+ +E  + + + +  T +L+   Q+LP    +  +AS++ S + +P
Sbjct:   180 ILNLFHERIENKFKNILEQKICEMVEKATTSRLEPYLQTLPVISMIDQVASIDYSLIGAP 239

Query:   245 VLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAK---MIGIQLNENVFSSGA 301
              ++   ++    G F   +G S        FE+      P K   M+   ++E VF++ +
Sbjct:   240 QVNSQVLDTPFKGEFFGQNGHS-----RAPFEAPP-IRLPEKHDYMVYFAISEYVFNTAS 293

Query:   302 LVYFNSGTVVF 312
              VY  +G + F
Sbjct:   294 WVYHQAGYMNF 304

GO:0008289 "lipid binding" evidence=IEA

UNIPROTKB|P17213 BPI "Bactericidal permeability-increasing protein" [Homo sapiens (taxid:9606)]

 Score = 184 (69.8 bits), Expect = 9.2e-12, P = 9.2e-12
 Identities = 61/295 (20%), Positives = 125/295 (42%)

Query:    19 LLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIG 78
             L+ I T+    VN G  +   IS+KGLD+            +  +++PD   S KI  +G
Sbjct:    21 LVAIGTAVTAAVNPGVVVR--ISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLG 78

Query:    79 KVHMALSNIIIYSVEIDSSYVE-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSG 137
             K H +  ++ I   ++ SS +    +  L  ++S A       W+ +   +L   +S + 
Sbjct:    79 KGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWK-AQKRFL--KMSGNF 135

Query:   138 AAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGG-ASWLYQALFEAFEG 196
                                  G   +    C SH+  + + +      WL Q   +  E 
Sbjct:   136 DLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIES 195

Query:   197 KIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEI 255
              +++ + S V +K++  ++ +L   FQ+LP    +  +A +N   V  P  +  +++V++
Sbjct:   196 ALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQM 255

Query:   256 NGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
              G F + +  +   +     E  A+     +M+ + L++  F++  LVY  +G +
Sbjct:   256 KGEFYSENHHNPPPFAPPVMEFPAAHD---RMVYLGLSDYFFNTAGLVYQEAGVL 307

GO:0005737 "cytoplasm" evidence=IEA

GO:0006955 "immune response" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEA

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0001530 "lipopolysaccharide binding" evidence=IDA

GO:0032715 "negative regulation of interleukin-6 production" evidence=IDA

GO:0032717 "negative regulation of interleukin-8 production" evidence=IDA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IDA

GO:0043031 "negative regulation of macrophage activation" evidence=IDA

RGD|1303179 Bpi "bactericidal/permeability-increasing protein" [Rattus norvegicus (taxid:10116)]

 Score = 182 (69.1 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 56/246 (22%), Positives = 102/246 (41%)

Query:    17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
             L+LL I  +A     + G++ A IS+KGLDF     + +    ++ + +PD     KI  
Sbjct:    14 LALLAIVGTALTAATDPGFV-ARISQKGLDFVCQESMVELQKELLAISIPDFSGDFKIKH 72

Query:    77 IGKVHMALSNIIIYSVEIDSSYVETGDPD-LLLAVSGATADCGMNWEYSYGSWLLPTISD 135
             +GK      ++ +    I    ++    D L L+++ A+      W+Y     +L   + 
Sbjct:    73 LGKGTYEFYSMAVEGFHIPDPQIKLLPSDGLQLSITSASIKISGRWKYRKN--ILK--AS 128

Query:   136 SGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAF 194
                                 +  G + +    C SH+  + IKV G    WL Q      
Sbjct:   129 GNFQLSIQGVSIIADLILGNDPSGRITITCSTCDSHINSVRIKVSGSMLGWLIQLFHRKI 188

Query:   195 EGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEV 253
             E  +K  +   + K +   ++ KL    ++LP    V DI S++ S +  P+ +D  +E 
Sbjct:   189 ETSLKKTIYKKICKIVRNSVSAKLQPYVKTLPVVAKVDDITSIDYSLLAPPMTTDKFLEG 248

Query:   254 EINGLF 259
             ++ G F
Sbjct:   249 QLRGEF 254

GO:0001530 "lipopolysaccharide binding" evidence=ISO;IDA

GO:0005576 "extracellular region" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0006955 "immune response" evidence=IDA

GO:0008289 "lipid binding" evidence=TAS

GO:0016020 "membrane" evidence=IEA

GO:0032715 "negative regulation of interleukin-6 production" evidence=IEA;ISO

GO:0032717 "negative regulation of interleukin-8 production" evidence=IEA;ISO

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA;ISO

GO:0042742 "defense response to bacterium" evidence=IDA

GO:0043031 "negative regulation of macrophage activation" evidence=IEA;ISO

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=IDA

UNIPROTKB|P18428 LBP "Lipopolysaccharide-binding protein" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 6.1e-11, P = 6.1e-11
 Identities = 72/317 (22%), Positives = 127/317 (40%)

Query:     1 MGCFIKFSSPAILFMFLSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSI 60
             MG   + + P+IL   L+LLL  T   +  N G  + A I+ KGL +     +    S +
Sbjct:     1 MGALAR-ALPSIL---LALLLTSTPEALGANPG--LVARITDKGLQYAAQEGLLALQSEL 54

Query:    61 IPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEI-DSSYVETGDPDLLLAVSGATADCGM 119
             + + LPD     +IP +G+      ++ I+S E+  S+        L L++S ++     
Sbjct:    55 LRITLPDFTGDLRIPHVGRGRYEFHSLNIHSCELLHSALRPVPGQGLSLSISDSSIRVQG 114

Query:   120 NWEYSYGSWLLPTISDSGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKV 179
              W+     + L    D                    E  G   V    C S + D+ + +
Sbjct:   115 RWKVRKSFFKLQGSFDVSVKGISISVNLLLGS----ESSGRPTVTASSCSSDIADVEVDM 170

Query:   180 DGGASWLYQALFEAFEGKIKSAVESAVTKKISELITK-LDSIFQSLPKQIPVSDIASMNT 238
              G   WL        E K +  +ES + + I + ++  L    Q+LP    +   A ++ 
Sbjct:   171 SGDLGWLLNLFHNQIESKFQKVLESRICEMIQKSVSSDLQPYLQTLPVTTEIDSFADIDY 230

Query:   239 SFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPA---KMIGIQLNEN 295
             S V +P  +   +EV   G     +  S +         +A  S P    KM+   +++ 
Sbjct:   231 SLVEAPRATAQMLEVMFKGEIFHRNHRSPVTLL------AAVMSLPEEHNKMVYFAISDY 284

Query:   296 VFSSGALVYFNSGTVVF 312
             VF++ +LVY   G + F
Sbjct:   285 VFNTASLVYHEEGYLNF 301

GO:0002232 "leukocyte chemotaxis involved in inflammatory response" evidence=IEA

GO:0032722 "positive regulation of chemokine production" evidence=IEA

GO:0042535 "positive regulation of tumor necrosis factor biosynthetic process" evidence=IEA

GO:0044130 "negative regulation of growth of symbiont in host" evidence=IEA

GO:0090023 "positive regulation of neutrophil chemotaxis" evidence=IEA

GO:0001530 "lipopolysaccharide binding" evidence=ISS;IDA

GO:0032760 "positive regulation of tumor necrosis factor production" evidence=ISS;IDA

GO:0070891 "lipoteichoic acid binding" evidence=IDA

GO:0071222 "cellular response to lipopolysaccharide" evidence=IDA

GO:0071223 "cellular response to lipoteichoic acid" evidence=IDA

GO:0005576 "extracellular region" evidence=TAS

GO:0008063 "Toll signaling pathway" evidence=TAS

GO:0045087 "innate immune response" evidence=IC;ISS;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005615 "extracellular space" evidence=ISS;IDA

GO:0002281 "macrophage activation involved in immune response" evidence=ISS

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=ISS;IDA

GO:0006968 "cellular defense response" evidence=ISS

GO:0050829 "defense response to Gram-negative bacterium" evidence=ISS

GO:0050830 "defense response to Gram-positive bacterium" evidence=IC;IEP

GO:0006953 "acute-phase response" evidence=IEP;ISS

GO:0008228 "opsonization" evidence=IC;ISS

GO:0051637 "Gram-positive bacterial cell surface binding" evidence=IDA

GO:0015920 "lipopolysaccharide transport" evidence=IDA

GO:0032490 "detection of molecule of bacterial origin" evidence=IDA

GO:0034145 "positive regulation of toll-like receptor 4 signaling pathway" evidence=IDA

GO:0032496 "response to lipopolysaccharide" evidence=IDA

GO:0043498 "cell surface binding" evidence=ISS

GO:0060265 "positive regulation of respiratory burst involved in inflammatory response" evidence=ISS

GO:0005102 "receptor binding" evidence=ISS

GO:0032755 "positive regulation of interleukin-6 production" evidence=IDA

GO:0032757 "positive regulation of interleukin-8 production" evidence=IDA

GO:0043032 "positive regulation of macrophage activation" evidence=IDA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IDA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IDA

ZFIN|ZDB-GENE-070912-360 si:dkey-11f4.4 "si:dkey-11f4.4" [Danio rerio (taxid:7955)]

 Score = 172 (65.6 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 59/274 (21%), Positives = 108/274 (39%)

Query:    38 AVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEI-DS 96
             A++S+K L      +     S +    +PDI     I  IG V+  LS++ +   E  + 
Sbjct:    22 ALLSEKALTDLSQMMPVWIQSKMKSTAIPDIHDQVDIG-IGWVNYVLSHMRVVQCETAEP 80

Query:    97 SYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAAXXXXXXXXXXXXXXXKE 156
             S V      L L V   +      W   +G      I+DSG+                 +
Sbjct:    81 SLVFVEGTGLYLEVRELSLAVSGRWRTKFG-----IITDSGSFDVEVYNIYIRVVLGVGD 135

Query:   157 QGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISELITK 216
             + G + +    C + V ++ I+  GG S+ YQ   + F GK    +   +   I + +T 
Sbjct:   136 KDGHLSISSESCSNDVGNVYIQFHGGTSFFYQLFEDYFSGKASDMIRQKICPAIQQAVTN 195

Query:   217 LDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYHKGFE 276
             +++I Q     IPV     ++     +P ++D S  +E+   F +    S   +  + F+
Sbjct:   196 METILQERTVNIPVDKYVYLSAPLTSAPAVTDQSCRLEVKAEFYSRRSPSEPPFSARAFD 255

Query:   277 SSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
                S      M+ +  ++   +S A  Y  SG +
Sbjct:   256 LQYS---DKHMLTLAASQFTVNSAAFAYLRSGAL 286

GO:0008289 "lipid binding" evidence=IEA

UNIPROTKB|F1Q3J3 BPI "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 170 (64.9 bits), Expect = 4.0e-10, P = 4.0e-10
 Identities = 58/299 (19%), Positives = 126/299 (42%)

Query:    17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
             L L ++ T+A V     G + A I++KGLD+     +      +  +++P    S K+  
Sbjct:    15 LVLAILGTAAVVTTTNPGVV-ARITQKGLDYACQQGVAVLQKELEKIKIPTFSGSFKVKH 73

Query:    77 IGKVHMALSNIIIYSVEIDSSYVE-TGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISD 135
             +GK H +  +++I   ++ SS ++   +  L L++  A       W+       + T  +
Sbjct:    74 LGKGHYSFYSMVIRGFQLPSSQIKLVPNKGLDLSIRNANIKISGKWKARKN--FIKTSGN 131

Query:   136 SGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAF 194
                +                  G +  +I   C +++  + + + GG   WL Q   +  
Sbjct:   132 FDLSVESISISAGLNMSFDPTSGHLT-IICSSCNNYIDSVRVHISGGRLGWLIQLFHKKI 190

Query:   195 EGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEV 253
             E  I+  + + + + +S  ++ +L S  ++LP    +  IA ++ S V  P  +  +++ 
Sbjct:   191 ESSIRKTMNNKICQVVSSSVSSRLQSYLKTLPVTYKIDRIAGISYSLVAPPTATADNLDG 250

Query:   254 EINGLFTAISGTSMLNYYHKGFESSASCSSPAK--MIGIQLNENVFSSGALVYFNSGTV 310
              + G F      S+ +     F   A    P    M+ + +++  F++  LVY  +G +
Sbjct:   251 HLKGEFF-----SLAHPRSPPFTPPAMALPPDHDHMVYLGISDYFFNTAGLVYQEAGAL 304

GO:0043031 "negative regulation of macrophage activation" evidence=IEA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA

GO:0032717 "negative regulation of interleukin-8 production" evidence=IEA

GO:0032715 "negative regulation of interleukin-6 production" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0001530 "lipopolysaccharide binding" evidence=IEA

UNIPROTKB|I3LFA0 BPI "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 168 (64.2 bits), Expect = 6.8e-10, P = 6.8e-10
 Identities = 61/297 (20%), Positives = 121/297 (40%)

Query:    17 LSLLLIPTSAHVQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL 76
             ++L  + T+     N G  I A I++KGLD+     +      +  + +P    S KI  
Sbjct:    15 VALAALGTAVTAAANPG--IVARITQKGLDYACQQGVATLRKELEKITIPTFSGSFKIKY 72

Query:    77 IGKVHMALSNIIIYSVEIDSSYVETG-DPDLLLAVSGATADCGMNWEYSYGSWLLPTISD 135
              GK      ++++   ++ +S +    D  L L++  A+      W+ +  +++    S 
Sbjct:    73 FGKGRYNFYSMVVREFKLPTSQIRLSPDQGLDLSIKDASVKISGKWK-AQKNFI--KASG 129

Query:   136 SGAAXXXXXXXXXXXXXXXKEQGGIVKVILVDCGSHVRDISIKVDGGA-SWLYQALFEAF 194
             +                      G   V    C SH+  + ++  G +  WL Q      
Sbjct:   130 NFDLSVEGISVLASLRLGYDPTSGHSTVSCSSCRSHINRVHVRTSGSSLKWLIQLFHRNI 189

Query:   195 EGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEV 253
             E  ++ A+ES + K ++  ++ KL   FQ+LP    V  +  +N S V  P  S  +++ 
Sbjct:   190 ESALRKAMESKICKMLTNTVSSKLQPYFQTLPVTAKVDRMVGINYSLVAPPKASAENLDG 249

Query:   254 EINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
              + G F ++   S   +        A      +M+ + ++E  F++  LVY  +G +
Sbjct:   250 LLKGEFFSLDHPSPPPFAPPALALPADHD---RMVYLCISEYFFNTAGLVYQKAGVL 303

GO:0043031 "negative regulation of macrophage activation" evidence=IEA

GO:0032720 "negative regulation of tumor necrosis factor production" evidence=IEA

GO:0032717 "negative regulation of interleukin-8 production" evidence=IEA

GO:0032715 "negative regulation of interleukin-6 production" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0001530 "lipopolysaccharide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	320
cd00025	223	cd00025, BPI1, BPI/LBP/CETP N-terminal domain; Bac	8e-34
pfam01273	163	pfam01273, LBP_BPI_CETP, LBP / BPI / CETP family,	9e-19
smart00328	225	smart00328, BPI1, BPI/LBP/CETP N-terminal domain	1e-18

>gnl|CDD|237992 cd00025, BPI1, BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative bacteria

 Score =  123 bits (310), Expect = 8e-34
 Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 9/228 (3%)

Query: 36  ISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEID 95
             A +S KGL F K   +    + +  L++PDI  + KI L+GK  + LSN  I  +++ 
Sbjct: 2   AVARLSPKGLKFAKQQGLKVLQAELEKLQIPDILGAMKIKLLGKGRVGLSNKEIQELKLP 61

Query: 96  SSYVETGDPDLL-LAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSL 154
           SS ++  +   L L++S  +      W+Y+Y       I D G   + VEG+ +   + L
Sbjct: 62  SSSIKLVEVKGLDLSISNVSIGLSGVWKYNY-----RFILDGGNVELSVEGMNIQADLRL 116

Query: 155 K-EQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGK-IKSAVESAVTKKISE 212
             +  G  K+ L DC S V  + + + G   WL +      E    K           + 
Sbjct: 117 GRDPSGRPKLSLSDCSSTVGSLRVHLGGSLGWLAKLFMNFIESLLKKVLKGQLCPVIDAS 176

Query: 213 LITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFT 260
           L++ L+S    LPK  PV   A ++ S    PVL+ S ++ +I G F 
Sbjct: 177 LVSMLES-LLQLPKLPPVDSNAGVDYSLTSPPVLTASYLDSDIKGTFQ 223

; Apolar pockets on the concave surface bind a molecule of phosphatidylcholine, primarily by interacting with their acyl chains; this suggests that the pockets may also bind the acyl chains of lipopolysaccharide. Length = 223

>gnl|CDD|216404 pfam01273, LBP_BPI_CETP, LBP / BPI / CETP family, N-terminal domain

 Score = 81.6 bits (202), Expect = 9e-19
 Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)

Query: 44  GLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVETGD 103
           GLD+     +      +  + LPDI  ++ I L+GKV   ++N+ I ++++ SS +E   
Sbjct: 1   GLDYANQLGLKALQKELQKITLPDILGTEGIKLLGKVLYNITNLKISNLQLPSSQLELS- 59

Query: 104 PDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK--EQGGIV 161
           P   L +  +     ++ ++      L           LV G+ +  ++ L+    G   
Sbjct: 60  PGGGLLLLISPLTLSVSGKWPLRGEFLE----------LVVGVNITASLRLERDPTGRPT 109

Query: 162 KVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSAVESAVTKKISEL 213
            V+L +C S+   ISI + GG  WL        E  +   ++  +   I+ L
Sbjct: 110 -VVLSECSSNPGSISISLLGGLGWLLDLFTNLLEKTLPKVLQGQLCPVINVL 160

The N and C terminal domains of the LBP/BPI/CETP family are structurally similar. Length = 163

>gnl|CDD|214622 smart00328, BPI1, BPI/LBP/CETP N-terminal domain

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 19/229 (8%)

Query: 40  ISKKGLDFFKNYLIN---KATSSIIP-LELPDIEKSKKIPLIGKVHMALSNIIIYSVEID 95
           I++KGLD    Y       A    +P + +PDI     I L+G  H ++ ++ I  +E+ 
Sbjct: 2   ITQKGLD----YAAQEGALALQKELPKITIPDIRGDFAIKLLGIGHYSIYSLSISRLELP 57

Query: 96  SSYVETGDPDLLLAVSGATADCGM--NWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVS 153
           SS +    P   L +S +     +  + + S        I   G   + VEGL +   + 
Sbjct: 58  SSLLRF-QPSKGLRLSISNLSLRVSGDLKGSL-----NFIKLEGNFQLSVEGLSISADLR 111

Query: 154 L-KEQGGIVKVILVDCGSHVRDISIKVDGG-ASWLYQALFEAFEGKIKSAVESAVTKKIS 211
           +     G   V L  C S + D+ +   G    WL     +  E  +++ +E  +   I 
Sbjct: 112 IESNASGRPTVTLSSCSSSIGDVRLHFSGSVLGWLINLFRKFIENTLRNVLEDQICPVID 171

Query: 212 ELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLF 259
             ++ K++   Q+LP  I +  +  ++ S V  P ++ S ++V + G F
Sbjct: 172 SAVSNKMNDYLQTLPLSISLDSLIGVDYSLVSPPRVTASFLDVRLKGKF 220

Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain. Length = 225

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	320
cd00025	223	BPI1 BPI/LBP/CETP N-terminal domain; Bactericidal	100.0
smart00328	225	BPI1 BPI/LBP/CETP N-terminal domain. Bactericidal	100.0
KOG4160	492	consensus BPI/LBP/CETP family protein [Defense mec	100.0
PF01273	164	LBP_BPI_CETP: LBP / BPI / CETP family, N-terminal	99.98
cd00264	208	BPI BPI/LBP/CETP domain; Bactericidal permeability	99.93
PF02886	238	LBP_BPI_CETP_C: LBP / BPI / CETP family, C-termina	99.46
PF06585	248	JHBP: Haemolymph juvenile hormone binding protein	98.66
smart00700	225	JHBP Juvenile hormone binding protein domains in i	98.56
PF14613	164	DUF4449: Protein of unknown function (DUF4449)	95.49

>cd00025 BPI1 BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative bacteria

Probab=100.00  E-value=7.1e-50  Score=356.14  Aligned_cols=220  Identities=30%  Similarity=0.477  Sum_probs=213.5

Q ss_pred             eEEEEechhHHHHHHHHHHHHHHhhcCCCCCCCceeeeeeceeeeEEEEEEeEEEEEEEeccceEEe-CCCeEEEEEECc
Q 020860           35 YISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGA  113 (320)
Q Consensus        35 Gi~vrit~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~~G~~~~~ls~i~I~~~~~p~~sv~~-p~~gl~l~i~~~  113 (320)
                      |+++|||+|||+|+++++++.++++++++++||++++.++|++|+++|++++++|+++++|++++++ |++|+.++++++
T Consensus         1 Gi~~rlt~~gL~y~~~~~~~~~~~~l~~i~iPdi~~~~~~~~iG~v~~~~s~i~I~~~~lp~s~l~~~~~~gi~~~~s~~   80 (223)
T cd00025           1 GAVARLSPKGLKFAKQQGLKVLQAELEKLQIPDILGAMKIKLLGKGRVGLSNKEIQELKLPSSSIKLVEVKGLDLSISNV   80 (223)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHHHHhhcCCCCCccCccccccccEEEEEEEeEEEEEEecCCCceEEcCCCceEEEEeCC
Confidence            7999999999999999999999999999999999999999989999999999999999999999999 999999999999


Q ss_pred             EEEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEE-ecCCeeEEEEeeeeEEeccEEEEEECCcchhHHHHHH
Q 020860          114 TADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-EQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFE  192 (320)
Q Consensus       114 ~i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~-~~~G~~~v~~~~C~~~i~~v~i~~~gg~s~l~n~f~~  192 (320)
                      ++.++++|+|+|+   +  ++++|.+++.++|+++++.+.+. |+.|+|+++..+|++++++++++++||++|+||.|.+
T Consensus        81 si~l~~~w~~~~~---~--i~~~G~~~l~v~gv~i~~~l~l~~d~~G~p~v~~~~C~~~v~~~~i~l~gg~~~l~~~f~~  155 (223)
T cd00025          81 SIGLSGVWKYNYR---F--ILDGGNVELSVEGMNIQADLRLGRDPSGRPKLSLSDCSSTVGSLRVHLGGSLGWLAKLFMN  155 (223)
T ss_pred             eEEEEEEEEEeeE---E--EEecEEEEEEEeEEEEEEEEEEeeCCCCCeEEEeCCCCcccCcEEEEEeCChHHHHHHHHH
Confidence            9999999999985   3  69999999999999999999999 7779999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhcCCceeeecceEEEEeeeccCCeeecceeEEeEEEEEE
Q 020860          193 AFEGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFT  260 (320)
Q Consensus       193 ~~~~~I~~~l~~~iC~~i~~~i~-~ln~~L~tlp~~~~l~~~~~idysl~~~P~it~~~i~~~l~G~f~  260 (320)
                      .+++.+|+.+++++|+++.+.++ .+|..|+ +|+.+|+|+.+.+||+|+++|.+|++|+|+++||+||
T Consensus       156 ~i~~~l~~~l~~~iCp~i~~~i~~~~~~~l~-lp~~~~vd~~~~idysl~~~P~~t~~~l~~~~kg~f~  223 (223)
T cd00025         156 FIESLLKKVLKGQLCPVIDASLVSMLESLLQ-LPKLPPVDSNAGVDYSLTSPPVLTASYLDSDIKGTFQ  223 (223)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHhhhhhcC-CceEeccCCcEEEEEEeecCCccccceeeeeeeEEEC
Confidence            99999999999999999999995 7888888 9999999999999999999999999999999999996

; Apolar pockets on the concave surface bind a molecule of phosphatidylcholine, primarily by interacting with their acyl chains; this suggests that the pockets may also bind the acyl chains of lipopolysaccharide.

>smart00328 BPI1 BPI/LBP/CETP N-terminal domain

Probab=100.00  E-value=5.7e-50  Score=357.42  Aligned_cols=221  Identities=22%  Similarity=0.379  Sum_probs=214.7

Q ss_pred             EechhHHHHHHHHHHHHHHhhcCCCCCCCceeeeeeceeeeEEEEEEeEEEEEEEeccceEEe-CCCeEEEEEECcEEEE
Q 020860           39 VISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADC  117 (320)
Q Consensus        39 rit~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~~G~~~~~ls~i~I~~~~~p~~sv~~-p~~gl~l~i~~~~i~l  117 (320)
                      |||++||+|++++++.+++++++++++||+++++++|++|+++|++++|+|+++++|.+++++ |+.|+.|+++++++.+
T Consensus         1 rit~~gL~y~~~~~~~~l~~~l~~i~iPdi~~~~~~~~~G~v~~~~~~i~I~~~~~~~s~~~~~p~~Gi~l~is~~si~~   80 (225)
T smart00328        1 RITQKGLDYAAQEGALALQKELPKITIPDIRGDFAIKLLGIGHYSIYSLSISRLELPSSQLRFQPSKGLRLSISNLSLRV   80 (225)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcCCCCCCcCceecccccEEEEEEEEEEEEeccCCCCccccCCCCceEEEEcCceEEE
Confidence            799999999999999999999999999999999999988999999999999999999999999 9999999999999999


Q ss_pred             EEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEE-ecCCeeEEEEeeeeEEeccEEEEEECC-cchhHHHHHHHHH
Q 020860          118 GMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-EQGGIVKVILVDCGSHVRDISIKVDGG-ASWLYQALFEAFE  195 (320)
Q Consensus       118 ~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~-~~~G~~~v~~~~C~~~i~~v~i~~~gg-~s~l~n~f~~~~~  195 (320)
                      +|+|++++.   +  |+++|.+++.++++++++.+.+. +.+|+|++...+|++++++++++++|+ ++|+||.|.+.++
T Consensus        81 ~~~~~~~~~---~--i~~~G~~~~~v~~~~i~~~l~l~~~~~G~p~v~~~~C~~~i~~v~l~~~G~~~swl~n~f~~~i~  155 (225)
T smart00328       81 SGDLKGSLN---F--IKLEGNFQLSVEGLSISADLRIESNPTGRPTVTLSSCSSSIGDVRLHFSGSVLGWLINLFRKFIE  155 (225)
T ss_pred             EEEEEEEEE---E--EEeeeEEEEEEeeEEEEEEEEeccCCCCCeeEEeCCcccCcceEEEEEECCchHHHHHHHHHHHH
Confidence            999999975   2  79999999999999999999998 999999999999999999999999996 9999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCceeeecceEEEEeeeccCCeeecceeEEeEEEEEEeccC
Q 020860          196 GKIKSAVESAVTKKISELI-TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISG  264 (320)
Q Consensus       196 ~~I~~~l~~~iC~~i~~~i-~~ln~~L~tlp~~~~l~~~~~idysl~~~P~it~~~i~~~l~G~f~~~~~  264 (320)
                      +.||+.++++||++|++.+ +++|++|+++|+.+++|+.+.+||+|+++|.+|++|+|++++|+|++.++
T Consensus       156 ~~i~~~l~~~IC~~i~~~i~~~l~~~L~~lp~~~~vd~~~~idysl~~~p~~t~~~l~~~~kg~f~~~~~  225 (225)
T smart00328      156 NTLRNVLEGQICPVIDSAVSNKMNDYLQTLPLSISLDSLIGVDYSLVSPPRVTAEFLDVRLKGKFFWKNH  225 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceeeeecceeEEeeecccCCcccccccccccceeEEeCCC
Confidence            9999999999999999998 68999999999999999999999999999999999999999999999763

Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain

>KOG4160 consensus BPI/LBP/CETP family protein [Defense mechanisms]

Probab=100.00  E-value=2.6e-43  Score=345.89  Aligned_cols=279  Identities=26%  Similarity=0.359  Sum_probs=253.3

Q ss_pred             CCceEEEEechhHHHHHHHHHHHHHHhhcCCCCCCCceeeeeeceeeeEEEEEEeEEEEEEEeccceEEe-CCCeEEEEE
Q 020860           32 EGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAV  110 (320)
Q Consensus        32 ~~pGi~vrit~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~~G~~~~~ls~i~I~~~~~p~~sv~~-p~~gl~l~i  110 (320)
                      .+||+++|++++|++|+++.+...+++++.++++||+.++++.+++|++.|.+++++|.++..+.+.+++ +..++.|++
T Consensus        26 ~~pg~~vri~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~g~~~~~~~~i~i~~~~~~s~~~~~~~~~~~~~~~  105 (492)
T KOG4160|consen   26 HNPGIVVRINQKALDYVSDEGALVLQAELLRLTIPDIEGSMKSSHIGGGRYTLSSIKILRFSVPSSQLSLVPQAGLSWSI  105 (492)
T ss_pred             cCCceEEEechhhHHHHhHHHHHHHHHhhccCCchhhhcccccceecceEEEecceeEEeccccccceeecCCceEEEEE
Confidence            6789999999999999999999999999999999999999999988999999999999999999999999 878999999


Q ss_pred             ECcEEEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEE-e-cCCeeEEEEeeeeEEeccEEEEEECCcchhHH
Q 020860          111 SGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-E-QGGIVKVILVDCGSHVRDISIKVDGGASWLYQ  188 (320)
Q Consensus       111 ~~~~i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~-~-~~G~~~v~~~~C~~~i~~v~i~~~gg~s~l~n  188 (320)
                      +++++.+.++|++ .. |++   ..+|.+++.++|+++.+...++ + .+|+++++...|.+.+.++++.+++-.+|+++
T Consensus       106 ~n~~~~~~~~~~~-~~-~~~---~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~C~~~~~~l~~~~~~~~~~l~~  180 (492)
T KOG4160|consen  106 TNANISLSGRWKA-RT-RFL---ALGGQVDASVKGMDIQINLSLGSDIGDGKPAVSDSSCSAAISDLHVQMGSLASWLIQ  180 (492)
T ss_pred             eeEEEEEeeeeEe-EE-EEE---ecCCeeEEEeecceEEEeeeeeccCCCCcceeeeecceeEeeeeEeecCCCcHHHHH
Confidence            9999999999999 43 332   4459999999999999999998 6 89999999999999999999988866999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCceeeecceEEEEeeeccCCeeecceeEEeEEEEEEeccCccc
Q 020860          189 ALFEAFEGKIKSAVESAVTKKISELI-TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSM  267 (320)
Q Consensus       189 ~f~~~~~~~I~~~l~~~iC~~i~~~i-~~ln~~L~tlp~~~~l~~~~~idysl~~~P~it~~~i~~~l~G~f~~~~~~~~  267 (320)
                      .|.+.+.+.||..++.++|+.+++.+ .++|.+++++|+..++|+.+.|||+++++|.+|++++|++++|+|++..+...
T Consensus       181 ~~~~~~~~~i~~~~~~~~c~~~~~~~~~~~~~~l~~~~~~~~~d~~~~Idysl~~~P~~t~~~i~l~~~G~i~~~~~~~~  260 (492)
T KOG4160|consen  181 LFLNAISDNIRSVLESQICKKIRASVNGDLNSFLQTLPVSISVDSNAGIDYSLLGPPAITSSYIELDLKGEIFYSLGQVT  260 (492)
T ss_pred             HHHHHHHHHHHHHHhhhhcHHHHhhhchhhhhhhccCCcceecccccceeeEeccCCceecceEEEeeeeeEEeccCCCC
Confidence            99999999999999999999999999 59999999999999999999999999999999999999999999999433334


Q ss_pred             CCcCCCCCCCccCCCCCCceEEEEeccccchhhHHHHhhcCcEEEEEecc
Q 020860          268 LNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQL  317 (320)
Q Consensus       268 ~P~~~~~~p~~~~~~~~~~Ml~i~~Sey~~NS~~~~~~~~G~L~~~it~~  317 (320)
                      +|+  ..|+....+.++++|+++++|||++||++++||++|.+++++++.
T Consensus       261 ~~~--~~p~~~~~~~~~~~Mi~i~vSe~v~nSl~~~~~~~~~l~~~i~~~  308 (492)
T KOG4160|consen  261 PPF--PLPIVSPTPLSNSRMIYIYVSEYVFNSLLLHAYQAGLLKLLIDSD  308 (492)
T ss_pred             Ccc--cCCcccccCCCCCceEEEEEhhhhhhHHHHHHHHhCceeEEEcCc
Confidence            443  223333334557999999999999999999999999999999764

>PF01273 LBP_BPI_CETP: LBP / BPI / CETP family, N-terminal domain; InterPro: IPR017942 This entry represents the N-terminal domain found in several lipid-binding serum glycoproteins

Probab=99.98  E-value=1.9e-30  Score=220.44  Aligned_cols=161  Identities=29%  Similarity=0.544  Sum_probs=146.4

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCceeeeeeceeeeEEEEEEeEEEEEEEeccceEEe-CCCeEEEEEECcEEEEEEEEE
Q 020860           44 GLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVSGATADCGMNWE  122 (320)
Q Consensus        44 gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~~G~~~~~ls~i~I~~~~~p~~sv~~-p~~gl~l~i~~~~i~l~g~~~  122 (320)
                      ||||+++++++++++++++++|||+.++++.+++|++.|++++++|+++++|+.++++ |++|+.+...++++.++++|.
T Consensus         1 gL~y~~~~~~~~l~~~l~~~~ipdi~~~~~~~~~g~~~~~i~~i~I~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~   80 (164)
T PF01273_consen    1 GLDYANQVGIQILQKELQKIQIPDISGSFSSPFIGSVKYNISNIKISNFRLPQSSLELSPDGGIVLSIIPASASLSGNWP   80 (164)
T ss_dssp             HHHHHHHHHHHHHHHHHCC-----EEEEECETTTCCEEEEEEEEEEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEEEE
T ss_pred             ChHHHHHHHHHHHHHHhhcCCCCCcccccccccccceEEEEEeEEEEEeecCCccceECCCCceEEEEeeeEEEEEEEEe
Confidence            8999999999999999999999999999999888999999999999999999999999 999999999999999999999


Q ss_pred             EEEcccccceeecceEEEEEEecEEEEEEEEEE-ecCCeeEEEEeeeeEEeccEEEEEECCcchhHHHHHHHHHHHHHHH
Q 020860          123 YSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-EQGGIVKVILVDCGSHVRDISIKVDGGASWLYQALFEAFEGKIKSA  201 (320)
Q Consensus       123 ~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~-~~~G~~~v~~~~C~~~i~~v~i~~~gg~s~l~n~f~~~~~~~I~~~  201 (320)
                      ++..  ++   ..       +.++++++.++++ |..|+|++.+.+|++++++++++++||.+|+||.|.+.+++.|++.
T Consensus        81 ~~~~--~i---~~-------~~~v~i~~~i~l~~~~~G~~~v~~~~C~~~i~~v~i~~~gg~~~l~~~~~~~l~~~i~~~  148 (164)
T PF01273_consen   81 YKGG--FI---KI-------AVGVDISVTIRLERDESGRPTVVVGSCSSDIGSVDIKLHGGASWLYNLFINFLSKSIRSL  148 (164)
T ss_dssp             EEEC--CE---EE-------EEEEEEEEEEEEEEECCTEEEEEEEEEEEEEEEEEEEETTCGCCHHHHHHHHTHHHHHHH
T ss_pred             cCCC--hh---hh-------eeeEEEEEEEEEEEcCCCCeEEEECCCccCcceEEEEECCCcHHHHHHHHHHHHHHHHHH
Confidence            9963  22   22       6689999999999 8889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 020860          202 VESAVTKKISELITK  216 (320)
Q Consensus       202 l~~~iC~~i~~~i~~  216 (320)
                      +++++|+.|++.++.
T Consensus       149 l~~~iC~~i~~~l~~  163 (164)
T PF01273_consen  149 LQKKICPVINSLLSN  163 (164)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHhhcchHhHHhhcC
Confidence            999999999888754

The N- and C-terminal domains share a similar two-layer alpha/beta structure, but they show little sequence identity. Proteins containing this N-terminal domain include: Bactericidal permeability-increasing protein (BPI) Lipopolysaccharide-binding protein (LBP) Cholesteryl ester transfer protein (CETP) Phospholipid transfer protein (PLTP) Palate, lung and nasal epithelium carcinoma-associated protein (PLUNC) Bactericidal permeability-increasing protein (BPI) is a potent antimicrobial protein of 456 residues that binds to and neutralises lipopolysaccharides from the outer membrane of Gram-negative bacteria []. BPI contains two domains that adopt the same structural fold, even though they have little sequence similarity []. Lipopolysaccharide-binding protein (LBP) is an endotoxin-binding protein that is closely related to, and functions in a co-ordinated manner with BPI to facilitate an integrated host response to invading Gram-negative bacteria []. Cholesteryl ester transfer protein (CETP) is a glycoprotein that facilitates the transfer of lipids (cholesteryl esters and triglycerides) between the different lipoproteins that transport them through plasma, including HDL, LDL, VLDL and chylomicrons. These lipoproteins shield the lipids from water by encapsulating them within a coating of polar lipids and proteins []. Phospholipid transfer protein (PLTP) exchanges phospholipids between lipoproteins and remodels high-density lipoproteins (HDLs) []. Palate, lung and nasal epithelium carcinoma-associated protein (PLUNC) is a potential host defensive protein that is secreted from the submucosal gland to the saliva and nasal lavage fluid. PLUNC appears to be a secreted product of neutrophil granules that participates in an aspect of the inflammatory response that contributes to host defence []. Short palate, lung and nasal epithelium clone 1 (SPLUNC1) may bind the lipopolysaccharide of Gram-negative nanobacteria, thereby playing an important role in the host defence of nasopharyngeal epithelium [].; GO: 0008289 lipid binding; PDB: 1EWF_A 1BP1_A 2OBD_A.

>cd00264 BPI BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative bacteria

Probab=99.93  E-value=2.4e-24  Score=189.71  Aligned_cols=201  Identities=21%  Similarity=0.290  Sum_probs=184.2

Q ss_pred             eEEEEechhHHHHHHHHHHHHHHhhcCCCCCCCceeeeeec-----eeeeEEEEEEeEEEEEEEeccceEEe-CCCeEEE
Q 020860           35 YISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIP-----LIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLL  108 (320)
Q Consensus        35 Gi~vrit~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~-----~~G~~~~~ls~i~I~~~~~p~~sv~~-p~~gl~l  108 (320)
                      |+++||++++|+|+++.+.+..+. +..++.|++++..+++     ..|...|..++++|+.+..+..++++ | +|+.+
T Consensus         1 m~~~~ls~~~l~~~~~~~~~~~~~-~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~v~~~~-~g~~~   78 (208)
T cd00264           1 MVVLRLSEDVLNSALQVYLKAGAL-LLTLTIPDIPKALKLKLSGIIPLGAKKYPDMNLQLKILSLSSPTLKLSP-KGLDL   78 (208)
T ss_pred             CeEEEEeHHHHHHHHHHHHHHHHh-hcCcccCCCCCccccccccccceEEEEeeCCceEEEEEecCCCeEEEec-CCEEE
Confidence            589999999999999999999988 8889999999888764     36899999999999999999999999 7 89999


Q ss_pred             EEECcEEEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEEecCCeeEEEEeeeeEEeccEEEEEECCcchhHH
Q 020860          109 AVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGASWLYQ  188 (320)
Q Consensus       109 ~i~~~~i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~~~~G~~~v~~~~C~~~i~~v~i~~~gg~s~l~n  188 (320)
                      .++ +++++.+.|.++          ++|.+++.++ +++++.++++.++|++++....|++++++++++++|       
T Consensus        79 ~~~-~~i~~~~~~~~~----------~~~~~~~~l~-v~~~~~~~l~~~~g~l~~~l~~c~~~~~~~~~~~~g-------  139 (208)
T cd00264          79 SQS-VSIELFVTWPAS----------DGGNPLFSLE-VEISASLQLSVDPGRLTLSLSLCSSTVELLSSNIGG-------  139 (208)
T ss_pred             EEE-EEEEEEEEeccC----------CCCCEEEEEE-EEEEEEEEEEeeCCEEEEEEecCcceeeEEEEEEec-------
Confidence            999 999999998764          5677888887 999999999933399999999999999999999998       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhcCCceeeecceEEEEeeeccCCeeecceeEEeEEEE
Q 020860          189 ALFEAFEGKIKSAVESAVTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGL  258 (320)
Q Consensus       189 ~f~~~~~~~I~~~l~~~iC~~i~~~i~-~ln~~L~tlp~~~~l~~~~~idysl~~~P~it~~~i~~~l~G~  258 (320)
                       |.+.+.+.+++.+++++|+.+...++ ++++.++.+|+ ++++....+||+++.+|.++++|++++++|+
T Consensus       140 -~~~~~~~~l~~~l~~~lc~~v~~~~n~~l~~~l~l~~~-~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~  208 (208)
T cd00264         140 -FGNFIVSLLQKVLNTILCPVVLPALNSKLRSGLPLLPV-PPVPSPAGVDYSLTAEPVLSASFLLLDADVT  208 (208)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcCCc-cCCCceeEEEEEEccCCceeccEEEEccccC
Confidence             66678999999999999999999995 78999999999 9999999999999999999999999999874

; Apolar pockets on the concave surface bind a molecule of phosphatidylcholine, primarily by interacting with their acyl chains; this suggests that the pockets may also bind the acyl chains of lipopolysaccharide.

>PF02886 LBP_BPI_CETP_C: LBP / BPI / CETP family, C-terminal domain; InterPro: IPR001124 This entry represents the C-terminal domain found in several lipid-binding serum glycoproteins

Probab=99.46  E-value=5e-14  Score=126.75  Aligned_cols=67  Identities=18%  Similarity=0.165  Sum_probs=50.2

Q ss_pred             ceeEEeEEEEEEeccCcccCCcCCCCCCCccCCCCCCceEEEEeccccchhhHHHHhhcCcEEEEEeccC
Q 020860          249 SSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLG  318 (320)
Q Consensus       249 ~~i~~~l~G~f~~~~~~~~~P~~~~~~p~~~~~~~~~~Ml~i~~Sey~~NS~~~~~~~~G~L~~~it~~~  318 (320)
                      +|||+++||||++.+++..+||   .+|....++++++|+|+|+|||++||++|+||++|+|+++||+..
T Consensus         1 ~~~e~~~kGe~~~~~~~~~~~~---~~~~~~~~~~~~~Ml~~~iSey~~NS~~~~~~~~g~l~~~it~~~   67 (238)
T PF02886_consen    1 NYLETDHKGEFFPLNHHSPPPF---PPPVLPLPNSSSRMLYFWISEYVFNSLLYAAYQAGALDFTITPDM   67 (238)
T ss_dssp             SEEEEEE--EEEETTSB---SS-----EE-GGGS-SSSSEEEEEEHHHHHHHHHHHHHTT-SEEEEEHHH
T ss_pred             CccccccceeEEcCCCCCCCCC---CCCCcCCCCCCCcEEEEEEcHHHHHHHHHHHHHCCceEEEEecCc
Confidence            6899999999999998877774   233332346889999999999999999999999999999999753

The N- and C-terminal domains share a similar two-layer alpha/beta structure, but they show little sequence identity. Proteins containing this C-terminal domain include: Bactericidal permeability-increasing protein (BPI) Lipopolysaccharide-binding protein (LBP) Cholesteryl ester transfer protein (CETP) Phospholipid transfer protein (PLTP) Palate, lung and nasal epithelium carcinoma-associated protein (PLUNC) Bactericidal permeability-increasing protein (BPI) is a potent antimicrobial protein of 456 residues that binds to and neutralises lipopolysaccharides from the outer membrane of Gram-negative bacteria []. BPI contains two domains that adopt the same structural fold, even though they have little sequence similarity []. Lipopolysaccharide-binding protein (LBP) is an endotoxin-binding protein that is closely related to, and functions in a co-ordinated manner with BPI to facilitate an integrated host response to invading Gram-negative bacteria []. Cholesteryl ester transfer protein (CETP) is a glycoprotein that facilitates the transfer of lipids (cholesteryl esters and triglycerides) between the different lipoproteins that transport them through plasma, including HDL, LDL, VLDL and chylomicrons. These lipoproteins shield the lipids from water by encapsulating them within a coating of polar lipids and proteins []. Phospholipid transfer protein (PLTP) exchanges phospholipids between lipoproteins and remodels high-density lipoproteins (HDLs) []. Palate, lung and nasal epithelium carcinoma-associated protein (PLUNC) is a potential host defensive protein that is secreted from the submucosal gland to the saliva and nasal lavage fluid. PLUNC aapears to be a secreted product of neutrophil granules that participates in an aspect of the inflammatory response that contributes to host defence []. Short palate, lung and nasal epithelium clone 1 (SPLUNC1) may bind the lipopolysaccharide of Gram-negative nanobacteria, thereby playing an important role in the host defence of nasopharyngeal epithelium [].; GO: 0008289 lipid binding; PDB: 2OBD_A 1EWF_A 1BP1_A.

>PF06585 JHBP: Haemolymph juvenile hormone binding protein (JHBP); InterPro: IPR010562 This family consists of several insect specific haemolymph juvenile hormone binding proteins (JHBP)

Probab=98.66  E-value=4.9e-06  Score=75.16  Aligned_cols=184  Identities=14%  Similarity=0.196  Sum_probs=112.3

Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCCCCcee----eeeece---eeeEEEEEEeEEEEEEEe---ccceEEeCCCeEEEEEE
Q 020860           42 KKGLDFFKNYLINKATSSIIPLELPDIEK----SKKIPL---IGKVHMALSNIIIYSVEI---DSSYVETGDPDLLLAVS  111 (320)
Q Consensus        42 ~~gL~y~~~~~~~~l~~~l~~~~iPdi~~----~~~~~~---~G~~~~~ls~i~I~~~~~---p~~sv~~p~~gl~l~i~  111 (320)
                      ++-+..+.+...+.+.+.++.+.||.+.-    +.++..   ..+++..+.|+++++++-   ...++.+....+.+.+.
T Consensus        40 ~~cl~~~~~~~~~~l~~Gip~l~ip~ldPl~i~~~~~~~~~~~~~~~~~~~n~~i~Gls~~~v~~~~~d~~~~~~~~~~~  119 (248)
T PF06585_consen   40 NECLRESIENFRPYLAKGIPELGIPPLDPLYIPEIDINFNSGPINLKANFKNVKIYGLSNFEVNKVSVDLKKLKLNFDLT  119 (248)
T ss_dssp             HHHHHHHHHHHHHHHTCEBGGGTBEETTTEEEEEEEEEE-TTCTTEEEEEEEEEEESGGG-EEEEEEEETTTTEEEEEEE
T ss_pred             HHHHHHHHHHHHHhhcCCCcccCCCCCCCEEecceEEEeecCCceEEEEEEeEEEeccCCcEEEEEEEcCCCcEEEEEEE
Confidence            33444455556666666655555555421    111111   123567778888875443   33333334566777777


Q ss_pred             CcEEEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEE--ecCC--eeEEEEeeeeEEeccEEEEEECC-----
Q 020860          112 GATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK--EQGG--IVKVILVDCGSHVRDISIKVDGG-----  182 (320)
Q Consensus       112 ~~~i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~--~~~G--~~~v~~~~C~~~i~~v~i~~~gg-----  182 (320)
                      =-.+.+.|+|+..-....+| |+.+|.+++.+.+++++..+...  ..+|  ++++....+..+++++++++++-     
T Consensus       120 ~P~l~i~g~Y~~~g~i~~~p-i~g~G~~~~~l~~~~~~~~~~~~~~~~~g~~~l~i~~~~~~~~~~~~~~~~~nl~~g~~  198 (248)
T PF06585_consen  120 FPKLSIKGKYEIDGKILLLP-ISGKGDFNITLENVRATGTIKGEVYKKNGKTYLRITNFKIDFDLGNVKFDLENLFNGNK  198 (248)
T ss_dssp             E-EEEEEEEEEEEEEECCEC-CCTEEEEEEEEEEEEEEEEEEEEEEEETS-EEEEEEEEEEEEEECEEEEEESHHHHHHH
T ss_pred             EEEEEEEEEEEEeeeeeeeE-EeccceEEEEeeeEEEEEEEEEEEeecCCccEEEEEEEEEEEEeceEEEEeeccCCCCH
Confidence            66888899999886533367 89999999999999999998886  3344  56777777777889999998742     


Q ss_pred             -cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCc
Q 020860          183 -ASWLYQALFEAFEGKIKSAVESAVTKKISELI-TKLDSIFQSLPK  226 (320)
Q Consensus       183 -~s~l~n~f~~~~~~~I~~~l~~~iC~~i~~~i-~~ln~~L~tlp~  226 (320)
                       .+-..|-+.+..-..+-+.++..+-..+.+.+ ..+|+.|.++|.
T Consensus       199 ~l~~~~n~~in~~~~~~~~~~~p~i~~~~~~~i~~~~N~~l~~~p~  244 (248)
T PF06585_consen  199 ELSDFINKFINENWPELLNEVKPDIEEILSKIITDIINKILSKVPY  244 (248)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-C
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence             22233333332222333333444555555555 567899998886

Juvenile hormone (JH) has a profound effect on insects. It regulates embryogenesis, maintains the status quo of larva development and stimulates reproductive maturation in the adult forms. JH is transported from the sites of its synthesis to target tissues by a haemolymph carrier called juvenile hormone-binding protein (JHBP). JHBP protects the JH molecules from hydrolysis by non-specific esterases present in the insect haemolymph []. The crystal structure of the JHBP from Galleria mellonella (Wax moth) shows an unusual fold consisting of a long alpha-helix wrapped in a much curved antiparallel beta-sheet. The folding pattern for this structure closely resembles that found in some tandem-repeat mammalian lipid-binding and bactericidal permeability-increasing proteins, with a similar organisation of the major cavity and a disulphide bond linking the long helix and the beta-sheet. It would appear that JHBP forms two cavities, only one of which, the one near the N- and C-termini, binds the hormone; binding induces a conformational change, of unknown significance [, ].; PDB: 3A1Z_D 3AOS_B 3AOT_A 2RQF_A 2RCK_A 3E8W_A 3E8T_A.

>smart00700 JHBP Juvenile hormone binding protein domains in insects

Probab=98.56  E-value=7.2e-05  Score=66.69  Aligned_cols=183  Identities=16%  Similarity=0.251  Sum_probs=128.3

Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCCCCcee----eeeeceee----eEEEEEEeEEEEEEEecc-ceEEe--CCCeEEEEE
Q 020860           42 KKGLDFFKNYLINKATSSIIPLELPDIEK----SKKIPLIG----KVHMALSNIIIYSVEIDS-SYVET--GDPDLLLAV  110 (320)
Q Consensus        42 ~~gL~y~~~~~~~~l~~~l~~~~iPdi~~----~~~~~~~G----~~~~~ls~i~I~~~~~p~-~sv~~--p~~gl~l~i  110 (320)
                      .+-+.-+.+..++.+.+.++.+.||.+.-    +..+. .+    .++..++|+++.+++--. .+++.  ....+.+.+
T Consensus        16 ~~Ci~~~~~~~~~~~~~G~Pe~gip~ldPl~i~~~~i~-~~~~~~~~~~~~~n~~i~Gl~~~~i~~~~~~~~~~~~~~~~   94 (225)
T smart00700       16 SECLRDAIEALLPQLKNGIPEYGIPPLDPLEIDDLKIS-IGSGVIGLRLTFKNVKIYGLSNFEITKFKMDLKDKKIELKI   94 (225)
T ss_pred             hHHHHHHHHHHHHHHhcCCCccCCCCcCCEEeeeEEEe-cCCCceEEEEEEEEeEEEcCcceEEEEEEecCCCcEEEEEE
Confidence            55566666667777777777666666531    11111 12    356778888888765322 13444  345677888


Q ss_pred             ECcEEEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEE-ecCC--eeEEEEeeeeEEeccEEEEEECC-----
Q 020860          111 SGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-EQGG--IVKVILVDCGSHVRDISIKVDGG-----  182 (320)
Q Consensus       111 ~~~~i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~-~~~G--~~~v~~~~C~~~i~~v~i~~~gg-----  182 (320)
                      .--.+.+.|+|+.+-+...+| |+-+|.+++.++++++.+.+... ..+|  ++++....+...++++++++.+-     
T Consensus        95 ~~p~l~~~g~Y~~~g~ll~lp-i~g~G~~~~~l~n~~~~~~~~~~~~~~g~~yl~i~~~~~~~~~~~~~~~~~NLfngn~  173 (225)
T smart00700       95 EFPKLNVKGDYKLDGRLLGLP-LNGKGDANFTLENVKIRGTLKLKLGPDGKTYLKIKSLKVNFEVGDVKSHLDNLFNGNK  173 (225)
T ss_pred             ECCcEEEEeeeEeeeEEEEEE-ecCCCcEEEEEEeeEEEEEEEEEEccCCeEEEEEEEEEEEEEeceEEEEeeccCCCCH
Confidence            877789999999885544467 89999999999999988888876 3356  78888999999999999998753     


Q ss_pred             -cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCc
Q 020860          183 -ASWLYQALFEAFEGKIKSAVESAVTKKISELI-TKLDSIFQSLPK  226 (320)
Q Consensus       183 -~s~l~n~f~~~~~~~I~~~l~~~iC~~i~~~i-~~ln~~L~tlp~  226 (320)
                       .+-..|-|.+.--..+.+.++..+.+.+.+.+ ..+|+.+..+|.
T Consensus       174 ~L~~~~n~~lNen~~~i~~e~~p~i~~~~~~~~~~~~n~~~~~vp~  219 (225)
T smart00700      174 DLNDAINKFLNENWKALINELLPAIVEKLESIFLDLVNKVFAKVPI  219 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Confidence             33345555555555666666777777777776 678999998886

The juvenile hormone exerts pleiotropic functions during insect life cycles and its binding proteins regulate these functions.

>PF14613 DUF4449: Protein of unknown function (DUF4449)

Probab=95.49  E-value=0.044  Score=46.28  Aligned_cols=54  Identities=19%  Similarity=0.369  Sum_probs=48.7

Q ss_pred             EEeccEEEEEECC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 020860          170 SHVRDISIKVDGG-ASWLYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQS  223 (320)
Q Consensus       170 ~~i~~v~i~~~gg-~s~l~n~f~~~~~~~I~~~l~~~iC~~i~~~i~~ln~~L~t  223 (320)
                      ++|++++|++.-+ +.+||.+|++++-+.||..|++.|-.+|+..++.++..|-.
T Consensus         2 V~i~~L~ikikkSkHklL~~~fKPll~~~vR~alqKalE~qIr~~~~~~D~~l~~   56 (164)
T PF14613_consen    2 VDIDNLKIKIKKSKHKLLFKLFKPLLLKVVRPALQKALEKQIRDAFEKLDRFLYD   56 (164)
T ss_pred             cccccceeEeeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence            5688999999977 89999999999999999999999999999999888877753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	320
1bp1_A	456	Crystal Structure Of Bpi, The Human Bactericidal Pe		3e-10
1ewf_A	456	The 1.7 Angstrom Crystal Structure Of Bpi Length =		8e-10

>pdb|1BP1|A Chain A, Crystal Structure Of Bpi, The Human Bactericidal Permeability-Increasing Protein Length = 456

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 30  VNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIII 89
           VN G  +   IS+KGLD+            +  +++PD   S KI  +GK H +  ++ I
Sbjct: 1   VNPG--VVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDI 58
Query: 90  YSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAAXXXXXXXXXX 149
              ++ SS +    P++ L  S + A+  ++ ++      L  +S +             
Sbjct: 59  REFQLPSSQISMV-PNVGLKFSISNANIKISGKWKAQKRFL-KMSGNFDLSIEGMSISAD 116
Query: 150 XXXXXKEQGGIVKVILVDCGSHVRDISIKV-DGGASWLYQALFEAFEGKIKSAVESAVTK 208
                    G   +    C SH+  + + +      WL Q   +  E  +++ + S V +
Sbjct: 117 LKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCE 176
Query: 209 KISELI-TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSM 267
           K++  + +KL   FQ+LP    +  +A +N   V  P  +  +++V++ G F + +  + 
Sbjct: 177 KVTNSVSSKLQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNP 236
Query: 268 LNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
             +     E  A+     +M+ + L++  F++  LVY  +G +
Sbjct: 237 PPFAPPVMEFPAAHD---RMVYLGLSDYFFNTAGLVYQEAGVL 276

>pdb|1EWF|A Chain A, The 1.7 Angstrom Crystal Structure Of Bpi Length = 456

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 30  VNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIII 89
           VN G  +   IS+KGLD+            +  +++PD   S KI  +GK H +  ++ I
Sbjct: 1   VNPG--VVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDI 58
Query: 90  YSVEIDSSYVETGDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAAXXXXXXXXXX 149
              ++ SS +    P++ L  S + A+  ++ ++      L  +S +             
Sbjct: 59  REFQLPSSQISMV-PNVGLKFSISNANIKISGKWKAQKRFL-KMSGNFDLSIEGMSISAD 116
Query: 150 XXXXXKEQGGIVKVILVDCGSHVRDISIKV-DGGASWLYQALFEAFEGKIKSAVESAVTK 208
                    G   +    C SH+  + + +      WL Q   +  E  +++ + S V +
Sbjct: 117 LKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCE 176
Query: 209 KISELI-TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSM 267
           K++  + ++L   FQ+LP    +  +A +N   V  P  +  +++V++ G F + +  + 
Sbjct: 177 KVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNP 236
Query: 268 LNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTV 310
             +     E  A+     +M+ + L++  F++  LVY  +G +
Sbjct: 237 PPFAPPVMEFPAAHD---RMVYLGLSDYFFNTAGLVYQEAGVL 276

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	320
2obd_A	476	Cholesteryl ester transfer protein; lipid transfer	1e-42
1ewf_A	456	BPI, bactericidal/permeability-increasing protein;	3e-38
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>2obd_A Cholesteryl ester transfer protein; lipid transfer protein, lipid transport; HET: NDG FU4 2OB PCW EPE 1PE PG4; 2.10A {Homo sapiens} Length = 476

 Score =  152 bits (384), Expect = 1e-42
 Identities = 55/280 (19%), Positives = 103/280 (36%), Gaps = 8/280 (2%)

Query: 36  ISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEID 95
           I   I+K  L    +       ++      PDI   K + L+G+V   L NI I  + I 
Sbjct: 11  IVCRITKPALLVLNHETAKVIQTAFQRASYPDITGEKAMMLLGQVKYGLHNIQISHLSIA 70

Query: 96  SSYVETGDPD-LLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSL 154
           SS VE  +   + +++   +       +Y Y +     I  S    +    +++ +   L
Sbjct: 71  SSQVELVEAKSIDVSIQDVSVVFKGTLKYGYTTAWWLGIDQSIDFEI-DSAIDLQINTQL 129

Query: 155 KEQGGIVKVILVDCGSHVRDISIKVDGG--ASWLYQALFEAFEGKIKSAVESAVTKKISE 212
               G V+    DC      + + + G     W+ Q         +K  ++  + K+I+ 
Sbjct: 130 TADSGRVRTDAPDCYLSFHKLLLHLQGEREPGWIKQLFTNFISFTLKLVLKGQICKEINV 189

Query: 213 LITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTSMLNYYH 272
           +   +    Q+    I       ++ S    PV++ S +E    G F     +  L    
Sbjct: 190 ISNIMADFVQTRAASILSDGDIGVDISLTGDPVITASYLESHHKGHFIYKDVSEDLPLP- 248

Query: 273 KGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVF 312
                S +    ++M+    +E VF S A V F  G ++ 
Sbjct: 249 ---TFSPTLLGDSRMLYFWFSERVFHSLAKVAFQDGRLML 285

>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A* Length = 456

 Score =  140 bits (353), Expect = 3e-38
 Identities = 60/290 (20%), Positives = 124/290 (42%), Gaps = 15/290 (5%)

Query: 30  VNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIII 89
           VN G  +   IS+KGLD+            +  +++PD   S KI  +GK H +  ++ I
Sbjct: 1   VNPG--VVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDI 58

Query: 90  YSVEIDSSYVETGDPD-LLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEV 148
              ++ SS +       L  ++S A       W+          +  SG   + +EG+ +
Sbjct: 59  REFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQK-----RFLKMSGNFDLSIEGMSI 113

Query: 149 GLTVSL--KEQGGIVKVILVDCGSHVRDISIKVDGG-ASWLYQALFEAFEGKIKSAVESA 205
              + L      G   +    C SH+  + + +      WL Q   +  E  +++ + S 
Sbjct: 114 SADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQ 173

Query: 206 VTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISG 264
           V +K++  ++ +L   FQ+LP    +  +A +N   V  P  +  +++V++ G F + + 
Sbjct: 174 VCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENH 233

Query: 265 TSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLW 314
            +   +     E     ++  +M+ + L++  F++  LVY  +G +    
Sbjct: 234 HNPPPFAPPVME---FPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTL 280

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 2e-07
 Identities = 39/315 (12%), Positives = 81/315 (25%), Gaps = 67/315 (21%)

Query: 28  VQVNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNI 87
           + V E  ++     K   D  K+ L  +    I  +   D                   +
Sbjct: 22  LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHI--IMSKDAVS--------GTLRLFWTL 71

Query: 88  IIYSVEIDSSYVETG-DPD---LLLAVSGATADCGMNWEYSYGSWLLPTISDSGAAT--- 140
           +    E+   +VE     +   L+  +        M     Y        +D+       
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR-MYIEQRDRLYNDNQVFAKYN 130

Query: 141 V----LVEGLEVGLTVSLKEQGGIV--------KVILVDCGSHVRDISIKV--DGGASWL 186
           V        L   L   L+    ++        K  +           ++   D    WL
Sbjct: 131 VSRLQPYLKLRQALL-ELRPAKNVLIDGVLGSGKTWVA--LDVCLSYKVQCKMDFKIFWL 187

Query: 187 --------------YQALFEAFEGKIKSAVESAVTKK--ISELITKLDSIFQSLPKQIPV 230
                          Q L    +    S  + +   K  I  +  +L  + +S  K    
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS--KPYEN 245

Query: 231 S-----DIASMNT--SF-VRSPVL---SDSSVEVEINGLFTAISGTSMLNYYHKGFESSA 279
                 ++ +     +F +   +L       V    + L  A +    L+++        
Sbjct: 246 CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV---TDFLSAATTTHISLDHHSMTLTPDE 302

Query: 280 SCSSPAKMIGIQLNE 294
             S   K +  +  +
Sbjct: 303 VKSLLLKYLDCRPQD 317

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 1e-05
 Identities = 52/332 (15%), Positives = 107/332 (32%), Gaps = 102/332 (30%)

Query: 49  KNYLINKATSSIIPLELPDIEKSKKIPLIGKVHM-ALSNIIIYSVEIDSSYVETGDPDLL 107
            N+      SS I L +  I+   +  L  K +   L  +++ +V+         +    
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL--LVLLNVQ---------NAKAW 259

Query: 108 LAVSGATADCGMNWEYSYGSWLLPT----ISDSGAAT----VLVEGLEVGLTVSLKEQGG 159
            A +     C +         LL T    ++D  +A     + ++   + LT    E   
Sbjct: 260 NAFNL---SCKI---------LLTTRFKQVTDFLSAATTTHISLDHHSMTLT--PDEVKS 305

Query: 160 IV-KVILVD--------CGSHVRDISI----KVDGGASWLY--QALFEAFEGKIKSAVES 204
           ++ K +             ++ R +SI      DG A+W        +     I+S++  
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 205 AVTKKISELITKLDSIFQSLPK--QIP---------------VSDIASMNTSFVRSPVLS 247
               +  ++  +L S+F   P    IP               V  +  +N     S V  
Sbjct: 366 LEPAEYRKMFDRL-SVF---PPSAHIPTILLSLIWFDVIKSDVMVV--VNKLHKYSLVEK 419

Query: 248 DS-SVEVEINGLFTAISGT---------SMLNYY--HKGFESSASCSSPAK--------- 286
                 + I  ++  +            S++++Y   K F+S      P           
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD-DLIPPYLDQYFYSHIG 478

Query: 287 --MIGIQLNENVFSSGALVYFNSGTVVFLWLQ 316
             +  I+  E   +   +V+ +     F +L+
Sbjct: 479 HHLKNIEHPER-MTLFRMVFLD-----FRFLE 504

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	320
2obd_A	476	Cholesteryl ester transfer protein; lipid transfer	100.0
1ewf_A	456	BPI, bactericidal/permeability-increasing protein;	100.0
3uv1_A	196	DER F 7 allergen; super-roll; 2.00A {Dermatophagoi	99.25
3e8t_A	220	Takeout 1, takeout-like protein 1; transport prote	98.51
3h4z_A	568	Maltose-binding periplasmic protein fused with Al	97.69
2rck_A	225	JuvenIle hormone binding protein; hemolymph, JHBP-	97.45
2rqf_A	227	HJHBP, hemolymph juvenIle hormone binding protein;	96.52

>2obd_A Cholesteryl ester transfer protein; lipid transfer protein, lipid transport; HET: NDG FU4 2OB PCW EPE 1PE PG4; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.2e-59  Score=461.14  Aligned_cols=277  Identities=19%  Similarity=0.294  Sum_probs=261.5

Q ss_pred             CCCceEEEEechhHHHHHHHHHHHHHHhhcCCCCCCCceeeeeeceeeeEEEEEEeEEEEEEEeccceEEe-CCCeEEEE
Q 020860           31 NEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLA  109 (320)
Q Consensus        31 ~~~pGi~vrit~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~~G~~~~~ls~i~I~~~~~p~~sv~~-p~~gl~l~  109 (320)
                      ..+||+++|||||||||+++++.+++++++++++|||+++++++|++|+++|++++++|.++++|.+++++ |++|++|.
T Consensus         6 ~~~pGi~vrit~~gL~y~~~~~~~~lq~~l~~i~iPdi~g~~~i~~~G~~~y~ls~ikI~~~~~~~~~l~~~p~~gi~l~   85 (476)
T 2obd_A            6 SHEAGIVCRITKPALLVLNHETAKVIQTAFQRASYPDITGEKAMMLLGQVKYGLHNIQISHLSIASSQVELVEAKSIDVS   85 (476)
T ss_dssp             CEECSEEEEEEHHHHHHHGGGHHHHHHHHHHHCCCCCEEEEEEETTTEEEEEEEEEEEEEEEEEEEEEEEEETTTEEEEE
T ss_pred             CCCCeEEEEECHHHHHHHHHHHHHHHHHHhccCCCCCCCCceeccccceEEEEEEEEEEEEEEcCCceEEECCCCeEEEE
Confidence            37899999999999999999999999999999999999999999988999999999999999999999999 99999999


Q ss_pred             EECcEEEEEEEEEEEEc-ccccceeecceEEEEEEe-cEEEEEEEEEEecCCeeEEEEeeeeEEeccEEEEEECCc--ch
Q 020860          110 VSGATADCGMNWEYSYG-SWLLPTISDSGAATVLVE-GLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDGGA--SW  185 (320)
Q Consensus       110 i~~~~i~l~g~~~~~~~-~~~~P~i~~sG~~~~~v~-~~~i~~~~~l~~~~G~~~v~~~~C~~~i~~v~i~~~gg~--s~  185 (320)
                      +++++++++|+|++++. .|+   ++++|.+++.++ |+++++.+++++++|+|+++..+|++++++++++++|+.  +|
T Consensus        86 i~~~~i~l~g~w~~~~~~~~~---i~~~G~~~~~v~~gv~i~~~~~L~~~~G~~~v~~~~C~~~i~~v~v~~~g~~lps~  162 (476)
T 2obd_A           86 IQDVSVVFKGTLKYGYTTAWW---LGIDQSIDFEIDSAIDLQINTQLTADSGRVRTDAPDCYLSFHKLLLHLQGEREPGW  162 (476)
T ss_dssp             EEEEEEEEEEEEEEEESSCGG---GCSCEEEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEETTCCCCSS
T ss_pred             EeCCEEEEEEEEEEEeccCcE---EecceEEEEEEecCEEEEEEEEEecCCCcEEEEEcccEEEeeeEEEEEECCcchhH
Confidence            99999999999999995 575   799999999999 999999999998899999999999999999999999997  99


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCceeeecceEEEEeeeccCCeeecceeEEeEEEEEE-e--c
Q 020860          186 LYQALFEAFEGKIKSAVESAVTKKISELITKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFT-A--I  262 (320)
Q Consensus       186 l~n~f~~~~~~~I~~~l~~~iC~~i~~~i~~ln~~L~tlp~~~~l~~~~~idysl~~~P~it~~~i~~~l~G~f~-~--~  262 (320)
                      +||.|.+.+++.||+.+++++|++|.+.++++|+.|+++|+..++|+.+.+||+|+++|.+|++|||++++|+|+ +  .
T Consensus       163 l~n~f~~~i~~~i~~~l~~~iC~~i~~~i~~ln~~L~tlp~~~~id~~~~idysl~~~P~it~~~i~~~l~G~~~~~~~~  242 (476)
T 2obd_A          163 IKQLFTNFISFTLKLVLKGQICKEINVISNIMADFVQTRAASILSDGDIGVDISLTGDPVITASYLESHHKGHFIYKDVS  242 (476)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTEEEECCBSSCCEECSSEEEEEECCEEEETTBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEcceEEEEEEecCCCcccccEEEeeeeEEEEecccc
Confidence            999999999999999999999999999998899999999999999999999999999999999999999999999 7  5


Q ss_pred             cCcccCCcCCCCCCCccCCCCCCceEEEEeccccchhhHHHHhhcCcEEEEEecc
Q 020860          263 SGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQL  317 (320)
Q Consensus       263 ~~~~~~P~~~~~~p~~~~~~~~~~Ml~i~~Sey~~NS~~~~~~~~G~L~~~it~~  317 (320)
                      +++..+||.    |.++   ++++|+|+++|||++||++|+||++|+|+++||+.
T Consensus       243 ~~~~~~pf~----p~~~---~~~~Ml~~~lSey~~nS~~~~~~~ag~l~~~it~~  290 (476)
T 2obd_A          243 EDLPLPTFS----PTLL---GDSRMLYFWFSERVFHSLAKVAFQDGRLMLSLMGD  290 (476)
T ss_dssp             CCCCCCEEC----GGGS---CSSSSEEEEEEHHHHHHHHHHHHHTTCSEEEECHH
T ss_pred             CCCCCCCcC----CCCC---CCCceEEEEEcHHHHHHHHHHHHhCCceEEEEChH
Confidence            566666651    2222   77999999999999999999999999999999864

>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*

Probab=100.00  E-value=1.1e-57  Score=445.50  Aligned_cols=278  Identities=20%  Similarity=0.365  Sum_probs=263.1

Q ss_pred             CCceEEEEechhHHHHHHHHHHHHHHhhcCCCCCCCceeeeeeceeeeEEEEEEeEEEEEEEeccceEEe-CCCeEEEEE
Q 020860           32 EGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAV  110 (320)
Q Consensus        32 ~~pGi~vrit~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~~G~~~~~ls~i~I~~~~~p~~sv~~-p~~gl~l~i  110 (320)
                      ++||+++|||+|||+|+++++.+++++++++++|||++++++++++|+++|++++++|.++++|.+++++ |++|+++.+
T Consensus         1 ~~pGi~vrit~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~~g~~~~~ls~i~I~~~~~~~~~l~~~p~~gi~l~i   80 (456)
T 1ewf_A            1 VNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSI   80 (456)
T ss_dssp             CCCSEEEEEEHHHHHHHHHHHHHHHHHHHTTCCCCCEEEECSCSSSSSCEEEEEEEEEEEEECCCEEEEEETTTEEEEEE
T ss_pred             CCCcEEEEECHHHHHHHHHHHHHHHHHHhhcCCCCCccCceeccccceEEEEEEEEEEEEEecCCceEEECCCCEEEEEE
Confidence            4799999999999999999999999999999999999999999988999999999999999999999999 999999999


Q ss_pred             ECcEEEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEE-ec-CCeeEEEEeeeeEEeccEEEEEECC-cchhH
Q 020860          111 SGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-EQ-GGIVKVILVDCGSHVRDISIKVDGG-ASWLY  187 (320)
Q Consensus       111 ~~~~i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~-~~-~G~~~v~~~~C~~~i~~v~i~~~gg-~s~l~  187 (320)
                      ++++++++|+|++++  |+   ++++|.+++.++|+++++.++++ +. +|+|+++..+|++++++++++++|+ .+|+|
T Consensus        81 ~~~~~~l~~~~~~~~--~~---i~~~G~~~~~v~~v~i~~~~~l~~~~~~G~~~v~~~~C~~~~~~~~i~~~g~~~~~l~  155 (456)
T 1ewf_A           81 SNANIKISGKWKAQK--RF---LKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLI  155 (456)
T ss_dssp             EEEEEEEEEEEEEEE--TT---EEEEEEEEEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEECCEEEEECSCGGGHHHH
T ss_pred             eCCcEEEEEEEEEEE--EE---EeeeeEEEEEEeeEEEEEEEEEeecCCCCceEEEEecCceEeceEEEEEeCCchHHHH
Confidence            999999999999997  44   79999999999999999999999 88 9999999999999999999999999 99999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCceeeecceEEEEeeeccCCeeecceeEEeEEEEEEeccCcc
Q 020860          188 QALFEAFEGKIKSAVESAVTKKISELI-TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSDSSVEVEINGLFTAISGTS  266 (320)
Q Consensus       188 n~f~~~~~~~I~~~l~~~iC~~i~~~i-~~ln~~L~tlp~~~~l~~~~~idysl~~~P~it~~~i~~~l~G~f~~~~~~~  266 (320)
                      |.|.+.+++.|++.+++++|+.|.+.+ +++|+.|+++|+.+++|+.+.+||+++++|.+|++||+++++|+|++.++++
T Consensus       156 n~f~~~i~~~i~~~l~~~iC~~i~~~v~~~ln~~L~~lp~~~~id~~~~idysl~~~P~it~~~i~~~l~G~~~~~~~~~  235 (456)
T 1ewf_A          156 QLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHN  235 (456)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTSCSEEECSSSCEEECCBSSCCEECSSEEEEEECCEEECSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceeecCceEEEEEEeecCCcccccEEEEEEEEEEEeCCCCC
Confidence            999999999999999999999999977 7799999999999999999999999999999999999999999999999888


Q ss_pred             cCCcCCCCCCCccCCCCCCceEEEEeccccchhhHHHHhhcCcEEEEEecc
Q 020860          267 MLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQL  317 (320)
Q Consensus       267 ~~P~~~~~~p~~~~~~~~~~Ml~i~~Sey~~NS~~~~~~~~G~L~~~it~~  317 (320)
                      .+||+  ++|.+. ++++++|+|+++|||++||++|+||++|.|++++|++
T Consensus       236 ~~p~~--p~~~~~-p~~~~~m~~~~ls~~~~nS~l~~~~~~g~l~~~it~~  283 (456)
T 1ewf_A          236 PPPFA--PPVMEF-PAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDD  283 (456)
T ss_dssp             CCSSC--CCCCCC-CCCCSSSEEEEEEHHHHHHHHHHHHHTTCSEEEEEGG
T ss_pred             CCCCC--CCCcCC-CCCCCcEEEEEecHHHHHHHHHHHHhCCcceEEechh
Confidence            88863  234433 4466899999999999999999999999999999875

>3uv1_A DER F 7 allergen; super-roll; 2.00A {Dermatophagoides farinae}

Probab=99.25  E-value=7.7e-10  Score=95.48  Aligned_cols=165  Identities=12%  Similarity=0.186  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHhh--cCCCCCCCceeeeeec--ee-eeEEEEEEeEEEEEEE----eccceEEeCCCeEEEEEECc--
Q 020860           45 LDFFKNYLINKATSS--IIPLELPDIEKSKKIP--LI-GKVHMALSNIIIYSVE----IDSSYVETGDPDLLLAVSGA--  113 (320)
Q Consensus        45 L~y~~~~~~~~l~~~--l~~~~iPdi~~~~~~~--~~-G~~~~~ls~i~I~~~~----~p~~sv~~p~~gl~l~i~~~--  113 (320)
                      .+.+-+.+++.+++.  +-++++||+..+++-.  ++ -++++.++|..+++++    .++..+...+.++.+.+.=.  
T Consensus        12 ~N~~vD~~l~~~~~~~~lDP~~lpd~~~~f~~~~g~~~~~g~~~l~ng~l~GLSs~~R~Gd~~~~~~~~~~~~~~~vg~~   91 (196)
T 3uv1_A           12 INKAIDDAIAAIEQSETIDPMKVPDHADKFERHVGILDFKGELAMRNIEARGLKQMKRQGDANVKGEEGIVKAHLLIGVH   91 (196)
T ss_dssp             HHHHHHHHHHHHHTSSSSSSEEECCEEEEEEEECSSSEEEEEEEEEEEEEECGGGEEESSSCEEEEETTEEEEEEEEEES
T ss_pred             HHHHHHHHHHHHHhhcCCCCeecCccccccccccceEeeEEEEEEEEEEEEccccEEEccceEEEEcCCeEEEEEEeeec
Confidence            344444444444443  5589999998776432  11 2567889999999876    34556666556655444322  


Q ss_pred             EEEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEEecCCeeEEEEeeeeEEeccEEEEEEC-C-cchhHHHHH
Q 020860          114 TADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGSHVRDISIKVDG-G-ASWLYQALF  191 (320)
Q Consensus       114 ~i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~~~~G~~~v~~~~C~~~i~~v~i~~~g-g-~s~l~n~f~  191 (320)
                      ...++++|+++...+.   ++.+|.+++.+.++.+.+.+.+. .+|+|++..-.|. .+++++++++| | .+|+.+.+.
T Consensus        92 ~~~v~~~y~~~~~~~~---~~~~g~v~~~i~~~~v~~~~~~~-~~~~~~l~~f~i~-~l~~i~v~~~Glg~ld~l~~~i~  166 (196)
T 3uv1_A           92 DDIVSMEYDLAYKLGD---LHPTTHVISDIQDFVVALSLEIP-DEGNITMTSFEVR-QFANVVNHIGGLSILDPIFGVLS  166 (196)
T ss_dssp             SSCEEEEEEEEEEBTT---BCCEEEEEEEEETCEEEEEEEEE-SSSCCEEEEEEEC-CCSEEEEEETTCCTTSHHHHHHH
T ss_pred             eeEEEEEEEEEEEEcc---cCCcEEEEEEEEEEEEEEEEEEc-CCCceeeceecee-eecceEEEEECCcchHHHHHHHH
Confidence            2356667777653222   57889999999887777666665 4578888887777 69999999998 4 688777766


Q ss_pred             HH----HHHHHHHHHHHHHHHHHHHHH
Q 020860          192 EA----FEGKIKSAVESAVTKKISELI  214 (320)
Q Consensus       192 ~~----~~~~I~~~l~~~iC~~i~~~i  214 (320)
                      +.    |++.|++.+++.+++.|.+.+
T Consensus       167 n~~~~l~~~~I~~~ie~~v~~~i~~~l  193 (196)
T 3uv1_A          167 DVLTAIFQDTVRKEMTKVLAPAFKREL  193 (196)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            55    456666666666666665444

>3e8t_A Takeout 1, takeout-like protein 1; transport protein; HET: UQ8; 1.30A {Epiphyas postvittana} PDB: 3e8w_A*

Probab=98.51  E-value=4.5e-05  Score=66.49  Aligned_cols=182  Identities=9%  Similarity=0.077  Sum_probs=122.0

Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCCCCceee----eeeceeeeEEEEEEeEEEEEEEeccc-eEEe-C-CCeEEEEEECcE
Q 020860           42 KKGLDFFKNYLINKATSSIIPLELPDIEKS----KKIPLIGKVHMALSNIIIYSVEIDSS-YVET-G-DPDLLLAVSGAT  114 (320)
Q Consensus        42 ~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~----~~~~~~G~~~~~ls~i~I~~~~~p~~-sv~~-p-~~gl~l~i~~~~  114 (320)
                      .+-+-...+...+.+.+-++.+.||.+.--    .++. .+..+.+++|+++.+++--.. +++. + ...+.+.+.= .
T Consensus        13 ~~Ci~~~i~~~~~~l~~GiPelgip~ldPl~i~~~~i~-~~~~~~~~~n~~i~Gls~~~i~~~~~~~~~~~~~~~~~~-~   90 (220)
T 3e8t_A           13 SACMTSAFQQALPTFVAGLPDHGVEVMDVLDLDDFAFD-LSGLQFTLKEGKLKGLKGAVIDNVKWDLKKKNIEVDFHL-D   90 (220)
T ss_dssp             HHHHHHHHHHHHHHHHTCBGGGTBCCBTTEEECCEEEE-ETTEEEEEEEEEEECGGGCEEEEEEEETTTTEEEEEEEE-E
T ss_pred             HHHHHHHHHHHHHHhcCCCcccCCCCCCceeeeeEEEe-cCcEEEEEEeeEEEcCCceEEEEEEEcCCCcEEEEEEEE-E
Confidence            455666667777777777776667654311    1111 134667788888876543222 3444 3 4567777776 8


Q ss_pred             EEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEE--ec-CCe--eEEEEeeeeEEe-ccEEEEEECC------
Q 020860          115 ADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK--EQ-GGI--VKVILVDCGSHV-RDISIKVDGG------  182 (320)
Q Consensus       115 i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~--~~-~G~--~~v~~~~C~~~i-~~v~i~~~gg------  182 (320)
                      +.+.|+|+++-+.+++| +..+|.+.+.++++++.+.+...  .. +|+  +++....+..++ +++++++++-      
T Consensus        91 l~~~g~Y~~~g~il~lp-i~g~G~~~~~l~n~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~~~~~~~~~~~~nLfng~~~  169 (220)
T 3e8t_A           91 ATVKGHYTAGGRILILP-ITGDGQMKLKLKNIHIHLVVSYEMEKDAEGVDHVIFKKYTVTFDVKDNAQFGLTNLFNGNKE  169 (220)
T ss_dssp             EEEEEEEEEEEEETTEE-CCEEEEEEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEESSBGGGCHH
T ss_pred             EEEEEEEEEeeEEEEEE-EecCccEEEEEeeeEEEEEEEEEEEEecCCCEEEEEEEEEEEEEECCcEEEEEEcCCCCCHH
Confidence            88999999887655567 88999999999999998888886  34 775  888888999999 9999998852      


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCc
Q 020860          183 ASWLYQALFEAFEGKIKSAVESAVTKKISELI-TKLDSIFQSLPK  226 (320)
Q Consensus       183 ~s~l~n~f~~~~~~~I~~~l~~~iC~~i~~~i-~~ln~~L~tlp~  226 (320)
                      .+...|-|.+.--..+-+.++..+-+.+.+.+ ..+|+.+.++|.
T Consensus       170 L~~~~n~~iN~nw~~i~~e~~p~i~~~~~~~~~~i~n~if~~~p~  214 (220)
T 3e8t_A          170 LSDTMLTFLNQNWKQVSEEFGKPVMEAAAKKIFKNIKHFLAKVPI  214 (220)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence            33444444444444444555555555555555 557888888775

>3h4z_A Maltose-binding periplasmic protein fused with Al DERP7; MBP fusion, AHA1/BPI domain-like, super roll, sugar T transport, allergen; HET: GLC; 2.35A {Escherichia coli}

Probab=97.69  E-value=0.001  Score=65.89  Aligned_cols=150  Identities=13%  Similarity=0.203  Sum_probs=97.0

Q ss_pred             hcCCCCCCCceeeeee--cee-eeEEEEEEeEEEEEEEe----ccceEEeCCCeEEEEEECc--EEEEEEEEEEEEcccc
Q 020860           59 SIIPLELPDIEKSKKI--PLI-GKVHMALSNIIIYSVEI----DSSYVETGDPDLLLAVSGA--TADCGMNWEYSYGSWL  129 (320)
Q Consensus        59 ~l~~~~iPdi~~~~~~--~~~-G~~~~~ls~i~I~~~~~----p~~sv~~p~~gl~l~i~~~--~i~l~g~~~~~~~~~~  129 (320)
                      .+..+.+|+..-.+.-  .+| -+++..+.|.+++.++.    ++..+.-...-+++.+.-.  .-.+...+.+.+..|.
T Consensus       398 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  477 (568)
T 3h4z_A          398 TFDPMKVPDHSDKFERHIGIIDLKGELDMRNIQVRGLKQMKRVGDANVKSEDGVVKAHLLVGVHDDVVSMEYDLAYKLGD  477 (568)
T ss_dssp             TTTTEEECCEEEEEECCCSSSCCEEEEEEEEEEEECGGGCEECSCCEEEEETTEEEEEEEEEECSSCEEEEEEEEECBTT
T ss_pred             CcCCccCcchhhhhcCCceeeeecceeEeeccEEEeeeehhccccceeeccCcEEEEEeecccccccccceeEEEEEeec
Confidence            3456677886644311  111 23688899999887663    2333333333344333211  1125567777766554


Q ss_pred             cceeecceEEEEEEecEEEEEEEEEEecCCeeEEEEeeeeE-EeccEEEEEECC--cchhHHHHHHHHHHHHHHHHHHHH
Q 020860          130 LPTISDSGAATVLVEGLEVGLTVSLKEQGGIVKVILVDCGS-HVRDISIKVDGG--ASWLYQALFEAFEGKIKSAVESAV  206 (320)
Q Consensus       130 ~P~i~~sG~~~~~v~~~~i~~~~~l~~~~G~~~v~~~~C~~-~i~~v~i~~~gg--~s~l~n~f~~~~~~~I~~~l~~~i  206 (320)
                         ..+.|.+.+.+..+.+++.+.+ ...|.+.++  +.+. ++++++|+++|-  .+|++|.+.+.+.+.++.+|.+.+
T Consensus       478 ---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  551 (568)
T 3h4z_A          478 ---LHPNTHVISDIQDFVVELSLEV-SEEGNMTLT--SFEVRQFANVVNHIGGLSILDPIFAVLSDVLTAIFQDTVRAEM  551 (568)
T ss_dssp             ---BCCEEEEEEEESSEEEEEEEEE-CTTCCEEEE--EEEECCCSCEEEEETTCCTTSHHHHHHHHHHHHTTTTHHHHHH
T ss_pred             ---cCCCceEEeEeeeEEEEEEEEe-eccceEEee--eeeEEEecceeEEecCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               4578899999998888888888 666766554  4442 688999999986  899999988877777777776666


Q ss_pred             HHHHHHHH
Q 020860          207 TKKISELI  214 (320)
Q Consensus       207 C~~i~~~i  214 (320)
                      ...|.+.+
T Consensus       552 ~~~~~~~~  559 (568)
T 3h4z_A          552 TKVLAPAF  559 (568)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            66666665

>2rck_A JuvenIle hormone binding protein; hemolymph, JHBP-fold; HET: NAG; 2.44A {Galleria mellonella}

Probab=97.45  E-value=0.007  Score=52.75  Aligned_cols=127  Identities=13%  Similarity=0.159  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCcee----eeeeceee--eEEEEEEeEEEEEEEecc-ceEEe-CCCeEEEEEECcEE
Q 020860           44 GLDFFKNYLINKATSSIIPLELPDIEK----SKKIPLIG--KVHMALSNIIIYSVEIDS-SYVET-GDPDLLLAVSGATA  115 (320)
Q Consensus        44 gL~y~~~~~~~~l~~~l~~~~iPdi~~----~~~~~~~G--~~~~~ls~i~I~~~~~p~-~sv~~-p~~gl~l~i~~~~i  115 (320)
                      -+-...+...+.+.+-++.+.||.+.-    ..++.. |  ..+.+++|+++.+++--. .+++. ++ ..++     .+
T Consensus        17 Ci~~~i~~l~~~~~~GiPel~ip~ldPl~i~~~~i~~-g~~~~~~~~~n~~i~Gls~~~I~~~~~d~~-~~~~-----~l   89 (225)
T 2rck_A           17 CISKATQVFLDNTYQGIPEYNIKKLDPITIPSLEKSI-EKINLNVRYNNLKVTGFKNQKISHFTLVRD-TKAV-----NF   89 (225)
T ss_dssp             HHHHHHHHHHHHHTTCBGGGTBCCCSSEEEEEEEEEE-TTTTEEEEEEEEEEECGGGCEEEEEEEETT-TTEE-----EE
T ss_pred             HHHHHHHHHHHHhcCCCcccCCCCcCceecCceEEEe-CceEEEEEEEeeEEEcCCCcEEEEEEEecC-CCEE-----EE
Confidence            444555666677777777777775531    111110 2  356677777777654322 23444 32 2333     67


Q ss_pred             EEEEEEEEEEcccc-cceeecc---eEEEEEEecEEEEEEEEEE--ec-CCe--eEEEEeeeeEE-eccEEEEE
Q 020860          116 DCGMNWEYSYGSWL-LPTISDS---GAATVLVEGLEVGLTVSLK--EQ-GGI--VKVILVDCGSH-VRDISIKV  179 (320)
Q Consensus       116 ~l~g~~~~~~~~~~-~P~i~~s---G~~~~~v~~~~i~~~~~l~--~~-~G~--~~v~~~~C~~~-i~~v~i~~  179 (320)
                      .+.|+|+.+-+..+ +| +..+   |.+++.++ +.+.+.+...  .. +|+  ++++....... ++++++++
T Consensus        90 ~~~g~Y~~~g~il~~lp-i~g~~~~G~~~~~l~-~~~~~~~~~~~~~~~~G~~yl~v~~~~v~~~~ig~~~~~~  161 (225)
T 2rck_A           90 KTKVNFTAEGKLVIELP-KSSKTYTGEVTIEAS-AEGGAAYSYSVKTDDKGVEHYEAGPETVSCEIFGEPTLSV  161 (225)
T ss_dssp             EEEEEEEEEEEEEEEET-TTTEEEEEEEEEEEE-EEEEEEEEEEEECCSSSCCEEEECCCEEEEEECSCCEEEE
T ss_pred             EEEEEEEEeeEEEEEEE-ecccccccceEEEEE-EEEEEEEEEEEEEecCCeEEEEEEEEEEEEEEcCcEEEEH
Confidence            77788887654444 56 7888   99999999 9888887764  44 774  67777777785 99999999

>2rqf_A HJHBP, hemolymph juvenIle hormone binding protein; HET: JH3; NMR {Bombyx mori} PDB: 3a1z_A 3aos_A* 3aot_A*

Probab=96.52  E-value=0.13  Score=44.60  Aligned_cols=131  Identities=12%  Similarity=0.121  Sum_probs=78.1

Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCCCCceeeeeece----ee---eEEEEEEeEEEEEEEecc-ceEEe--CCCeEEEEEEC
Q 020860           43 KGLDFFKNYLINKATSSIIPLELPDIEKSKKIPL----IG---KVHMALSNIIIYSVEIDS-SYVET--GDPDLLLAVSG  112 (320)
Q Consensus        43 ~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~----~G---~~~~~ls~i~I~~~~~p~-~sv~~--p~~gl~l~i~~  112 (320)
                      +-+-...+...+.+.+-++.+.||.+.- ..++.    .|   ..+.+++|+++.+++--. .+++.  ....+.+.+..
T Consensus        17 ~Ci~~~i~~~~~~l~~GiPel~ip~ldP-l~i~~~~i~~~~~~~~~~~~~n~~i~Gls~~~I~~~~~d~~~~~~~l~~~~   95 (227)
T 2rqf_A           17 QCLSSATEQFLEKTSKGIPQYDIWPIDP-LVVTSLDVIAPSDAGIVIRFKNLNITGLKNQQISDFQMDTKAKTVLLKTKA   95 (227)
T ss_dssp             HHHHHHHHHHHHHHTTCBTTTTBCCCSS-EEESCEEEEETTTSCEEEEEEEEEEESCTTCEEEEEEEETTTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCcccCCCCCCc-EecccEEEEcCCceEEEEEEEEeEEEcccceEEEEEEEccCCcEEEEEEEE
Confidence            4555666667777777777777875531 11110    12   467778888887665322 23444  34556666654


Q ss_pred             cEEEEEEEEEEEEcccccceeec---ceEEEEEEecEEEEEEEEE--E-ecCCe--eEEEEeee-eEEeccEEEEEECC
Q 020860          113 ATADCGMNWEYSYGSWLLPTISD---SGAATVLVEGLEVGLTVSL--K-EQGGI--VKVILVDC-GSHVRDISIKVDGG  182 (320)
Q Consensus       113 ~~i~l~g~~~~~~~~~~~P~i~~---sG~~~~~v~~~~i~~~~~l--~-~~~G~--~~v~~~~C-~~~i~~v~i~~~gg  182 (320)
                       ...+.|++...     +| +..   +|.+++.++ +.+++.+..  . ..+|+  +++....+ ...++++++++.+-
T Consensus        96 -~y~i~G~y~l~-----lp-~~~g~~~G~~~itl~-v~~~~~~~~~~~~~~~G~~yl~i~~~~v~~~~ig~~~~~l~~~  166 (227)
T 2rqf_A           96 -DLHIVGDIVIE-----LT-EQSKSFTGLYTADTN-VIGAVRYGYNLKNDDNGVQHFEVQPETFTCESIGEPKITLSSD  166 (227)
T ss_dssp             -EEEEEEEEEEE-----ET-TTTEEEEEEEEEEEE-EEEEEEEEEEEEECSSSCEEEEECCCEEEEEECSSCEEEECHH
T ss_pred             -EEEEEEEEEEE-----Ee-cCCCceEEEEEEEEE-EEEEEEEEEEEEEccCCeEEEEEEEEEEEeEEeccEEEEcchh
Confidence             66677766653     34 343   466665555 555554433  2 34785  66666666 66999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	320
d1ewfa1	217	d.83.1.1 (A:1-217) Bactericidal permeability-incre	7e-42

>d1ewfa1 d.83.1.1 (A:1-217) Bactericidal permeability-increasing protein, BPI {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a+b)
fold: Aha1/BPI domain-like
superfamily: Bactericidal permeability-increasing protein, BPI
family: Bactericidal permeability-increasing protein, BPI
domain: Bactericidal permeability-increasing protein, BPI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 7e-42
 Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 12/223 (5%)

Query: 30  VNEGGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIII 89
           VN G  +   IS+KGLD+            +  +++PD   S KI  +GK H +  ++ I
Sbjct: 1   VNPG--VVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDI 58

Query: 90  YSVEIDSSYVET-GDPDLLLAVSGATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEV 148
              ++ SS +    +  L  ++S A       W+          +  SG   + +EG+ +
Sbjct: 59  REFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQK-----RFLKMSGNFDLSIEGMSI 113

Query: 149 GLTVSL--KEQGGIVKVILVDCGSHVRDISIKVDGG-ASWLYQALFEAFEGKIKSAVESA 205
              + L      G   +    C SH+  + + +      WL Q   +  E  +++ + S 
Sbjct: 114 SADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQ 173

Query: 206 VTKKISELIT-KLDSIFQSLPKQIPVSDIASMNTSFVRSPVLS 247
           V +K++  ++ +L   FQ+LP    +  +A +N   V  P  +
Sbjct: 174 VCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATT 216

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	320
d1ewfa1	217	Bactericidal permeability-increasing protein, BPI	100.0
d1ewfa2	239	Bactericidal permeability-increasing protein, BPI	99.47

>d1ewfa1 d.83.1.1 (A:1-217) Bactericidal permeability-increasing protein, BPI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Aha1/BPI domain-like
superfamily: Bactericidal permeability-increasing protein, BPI
family: Bactericidal permeability-increasing protein, BPI
domain: Bactericidal permeability-increasing protein, BPI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-51  Score=359.04  Aligned_cols=211  Identities=22%  Similarity=0.411  Sum_probs=204.1

Q ss_pred             CceEEEEechhHHHHHHHHHHHHHHhhcCCCCCCCceeeeeeceeeeEEEEEEeEEEEEEEeccceEEe-CCCeEEEEEE
Q 020860           33 GGYISAVISKKGLDFFKNYLINKATSSIIPLELPDIEKSKKIPLIGKVHMALSNIIIYSVEIDSSYVET-GDPDLLLAVS  111 (320)
Q Consensus        33 ~pGi~vrit~~gL~y~~~~~~~~l~~~l~~~~iPdi~~~~~~~~~G~~~~~ls~i~I~~~~~p~~sv~~-p~~gl~l~i~  111 (320)
                      |||+++|||+|||||+++++.++++++++++++||++++++++++|+++|+++|++|+++++|.+++++ |++|++|+++
T Consensus         2 nPGi~vrit~kgL~y~~~~~~~~l~~~l~~i~iPdi~~~~~i~~~G~v~y~ls~i~I~~~~~~~s~l~~~p~~gi~~~is   81 (217)
T d1ewfa1           2 NPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSIS   81 (217)
T ss_dssp             CCSEEEEEEHHHHHHHHHHHHHHHHHHHTTCCCCCEEEECSCSSSSSCEEEEEEEEEEEEECCCEEEEEETTTEEEEEEE
T ss_pred             CCcEEEEECHHHHHHHHHHHHHHHHHHhhcCCCCCccCcccccccceEEEEEEeeEEEEEecCCceeEecCCCeEEEEEe
Confidence            799999999999999999999999999999999999999999988999999999999999999999999 9999999999


Q ss_pred             CcEEEEEEEEEEEEcccccceeecceEEEEEEecEEEEEEEEEE-e-cCCeeEEEEeeeeEEeccEEEEEECC-cchhHH
Q 020860          112 GATADCGMNWEYSYGSWLLPTISDSGAATVLVEGLEVGLTVSLK-E-QGGIVKVILVDCGSHVRDISIKVDGG-ASWLYQ  188 (320)
Q Consensus       112 ~~~i~l~g~~~~~~~~~~~P~i~~sG~~~~~v~~~~i~~~~~l~-~-~~G~~~v~~~~C~~~i~~v~i~~~gg-~s~l~n  188 (320)
                      +++++++|+|++++  |+   ++++|+++++++++++++.++++ | .+|+|++++.+|++++++++++++|| ++|+||
T Consensus        82 ~~~~~l~g~w~~~~--~~---i~~~G~~~~~v~~~~i~~~~~l~~d~~~G~~~v~~~~C~~~i~~v~i~~~gg~~swl~n  156 (217)
T d1ewfa1          82 NANIKISGKWKAQK--RF---LKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQ  156 (217)
T ss_dssp             EEEEEEEEEEEEEE--TT---EEEEEEEEEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEECCEEEEECSCGGGHHHHH
T ss_pred             cCeEEEEEEEEEEE--EE---EEEeeEEEEEEEEEEEEEEEEEEeeCCCCcEEEEEccCceEeeeEEEEECCCchHHHHH
Confidence            99999999999997  43   79999999999999999999998 7 57999999999999999999999988 899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhcCCceeeecceEEEEeeeccCCeeec
Q 020860          189 ALFEAFEGKIKSAVESAVTKKISELI-TKLDSIFQSLPKQIPVSDIASMNTSFVRSPVLSD  248 (320)
Q Consensus       189 ~f~~~~~~~I~~~l~~~iC~~i~~~i-~~ln~~L~tlp~~~~l~~~~~idysl~~~P~it~  248 (320)
                      +|.+.+++.||+.|+++||+++++.+ +++|++|+++|+.+|+|+.+.+||+|+++|.+|+
T Consensus       157 ~f~~~i~~~ir~~l~~~iC~~i~~~i~~~ln~~L~~lp~~~~id~~~~idysl~~~P~~ts  217 (217)
T d1ewfa1         157 LFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTA  217 (217)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTSCSEEECSSSCEEECCBSSCCEECS
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeeeecCCceEEEEEeeCCCccCC
Confidence            99999999999999999999999999 6899999999999999999999999999999984

>d1ewfa2 d.83.1.1 (A:218-456) Bactericidal permeability-increasing protein, BPI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Aha1/BPI domain-like
superfamily: Bactericidal permeability-increasing protein, BPI
family: Bactericidal permeability-increasing protein, BPI
domain: Bactericidal permeability-increasing protein, BPI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.5e-14  Score=125.48  Aligned_cols=68  Identities=15%  Similarity=0.226  Sum_probs=59.0

Q ss_pred             ceeEEeEEEEEEeccCcccCCcCCCCCCCccCCCCCCceEEEEeccccchhhHHHHhhcCcEEEEEeccCC
Q 020860          249 SSVEVEINGLFTAISGTSMLNYYHKGFESSASCSSPAKMIGIQLNENVFSSGALVYFNSGTVVFLWLQLGL  319 (320)
Q Consensus       249 ~~i~~~l~G~f~~~~~~~~~P~~~~~~p~~~~~~~~~~Ml~i~~Sey~~NS~~~~~~~~G~L~~~it~~~~  319 (320)
                      +++|+++||+||+.+++..+||.  ++|.++ ++++++|+|+++|||++||++|+||++|.|+++||++.+
T Consensus         1 ~sl~~~~kG~f~~~~~~~~~pf~--~~~~~~-p~~~~~M~~~~isey~~nS~~~~~~~ag~l~~~it~~~i   68 (239)
T d1ewfa2           1 ETLDVQMKGEFYSENHHNPPPFA--PPVMEF-PAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMI   68 (239)
T ss_dssp             SEEEEEECCEEECSSCCCCCSSC--CCCCCC-CCCCSSSEEEEEEHHHHHHHHHHHHHTTCSEEEEEGGGS
T ss_pred             CccccceeEEEEeCCCCCCCCCC--CCCcCC-CCCCCcEEEEEEcHHHHHHHHHHHHHCCCeEEEEChhhc
Confidence            68999999999999999988873  344444 467789999999999999999999999999999998643