Citrus Sinensis ID: 020871
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | 2.2.26 [Sep-21-2011] | |||||||
| O33513 | 227 | Protein CbbY OS=Rhodobact | yes | no | 0.662 | 0.933 | 0.357 | 1e-28 | |
| P40119 | 254 | Protein CbbY, chromosomal | yes | no | 0.668 | 0.842 | 0.300 | 2e-27 | |
| Q04541 | 254 | Protein CbbY, plasmid OS= | yes | no | 0.668 | 0.842 | 0.296 | 2e-26 | |
| P95649 | 230 | Protein CbbY OS=Rhodobact | yes | no | 0.643 | 0.895 | 0.315 | 2e-25 | |
| P54607 | 220 | Uncharacterized protein Y | yes | no | 0.6 | 0.872 | 0.291 | 1e-14 | |
| P77475 | 188 | Fructose-1-phosphate phos | N/A | no | 0.546 | 0.930 | 0.267 | 2e-13 | |
| Q9X0Y1 | 216 | Phosphorylated carbohydra | yes | no | 0.584 | 0.865 | 0.251 | 3e-09 | |
| P77366 | 219 | Beta-phosphoglucomutase O | N/A | no | 0.6 | 0.876 | 0.255 | 4e-09 | |
| O06995 | 226 | Beta-phosphoglucomutase O | no | no | 0.562 | 0.796 | 0.269 | 1e-08 | |
| P65070 | 262 | Uncharacterized protein M | yes | no | 0.675 | 0.824 | 0.244 | 3e-08 |
| >sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 121/238 (50%), Gaps = 26/238 (10%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNW--DPEFYDVLQNQIGG 124
L+ALIFD DG + E+E +HRQA+N+ F+ Q L+W E Y L GG
Sbjct: 3 LKALIFDVDGTLAETEEVHRQAFNETFA----------AQGLDWYWSKEDYRTLLRTTGG 52
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
K +M + + G + AK+ DL KT+RY +II SG V PGV
Sbjct: 53 -KERMAKHRENLG------------SGPSDAKIADL-HKAKTQRYVEIIASGQVGLLPGV 98
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
L+D AKA+G ++A+ + T+++V + + + AGD+V QKKP P +Y
Sbjct: 99 AELIDRAKASGLRLAIATTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVY 158
Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302
+ A + LG+ CL EDS GL +A AG+ V+T + T DF A PDLS
Sbjct: 159 LRALQGLGLPPAACLAFEDSRAGLASARAAGLRVVLTPSEYTRGDDFSAADWRIPDLS 216
|
Rhodobacter capsulatus (taxid: 1061) |
| >sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3 | Back alignment and function description |
|---|
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 29/243 (11%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+QALIFD DG + ++E H QA+N AF+ + WD Y L ++ GGK
Sbjct: 1 MQALIFDVDGTLADTESAHLQAFNAAFAEVGL--------DWYWDAPLYTRLL-KVAGGK 51
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAK------LIDLIQDWKTERYQQIIKSGTVEP 180
++ Y++ + D ++A+ ID + KT Y + + +G +
Sbjct: 52 ERLMHYWR--------------MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPL 97
Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
RPG+ RL+DEA AG +A+ + T +++ L+ +G + KKP
Sbjct: 98 RPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGADWRRRFAAIGDAGTTAIKKPA 157
Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300
P +Y+ +RLG+ DCL +EDS GL+AA AG+ V+T T+ +A+ F+ A+ + P
Sbjct: 158 PDVYLAVLERLGLEGGDCLAIEDSANGLRAARAAGIPTVVTPTAFSAQDSFEGALLVLPH 217
Query: 301 LSN 303
L +
Sbjct: 218 LGD 220
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Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 29/243 (11%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+QALIFD DG + ++E H QA+N AF+ + +WD Y L ++ GGK
Sbjct: 1 MQALIFDVDGTLADTETAHLQAFNAAFAEVGL--------DWHWDAPLYTRLL-KVAGGK 51
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAK------LIDLIQDWKTERYQQIIKSGTVEP 180
++ Y++ + D ++A+ ID + KT Y + + +G +
Sbjct: 52 ERLMHYWR--------------MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPL 97
Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
RPG+ RL+ EA AG +A+ + T +++ L+ +G + KKP
Sbjct: 98 RPGIARLIAEAGEAGLPLAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIKKPA 157
Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300
P +Y+ +RLG+ DCL +EDS GL+AA AG+ V+T T+ +A+ F+ A+ + P
Sbjct: 158 PDVYLAVLERLGLEAGDCLAIEDSGNGLRAARAAGIPTVVTPTTFSAQDSFEGALLVLPH 217
Query: 301 LSN 303
L +
Sbjct: 218 LGD 220
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Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 112/228 (49%), Gaps = 22/228 (9%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A++FD DG + E+E LHR+A+N+ F+ V WD E Y L GG +
Sbjct: 2 IEAILFDVDGTLAETEELHRRAFNETFAALGV--------DWFWDREEYRELLTTTGGKE 53
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
R+ + G P+ P+ D I KTER+ ++ G + RPG+
Sbjct: 54 RIARFLRHQKGDPAPL-----PIAD---------IHRAKTERFVALMAEGEIALRPGIAD 99
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
L+ EAK AG ++AV + + +V G E D AGD V +KKP P IY
Sbjct: 100 LIAEAKRAGIRLAVATTTSLPNVEALCRACFGHPAREIFDVIAAGDMVAEKKPSPDIYRL 159
Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDA 294
A + L + + + +EDS+ GL+AA AG+ C+++ T ++F A
Sbjct: 160 ALRELDVPPERAVALEDSLNGLRAAKGAGLRCIVSPGFYTRHEEFAGA 207
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Rhodobacter sphaeroides (taxid: 1063) |
| >sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1 | Back alignment and function description |
|---|
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 38/230 (16%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFS-HFNVRCDPSSQQSLNWDPEF--YDVLQNQIG 123
++ALIFD DG+I+++E + + F H +V + + F ++ L+ QIG
Sbjct: 2 IKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQIG 61
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
+ ++ +L + ER+ + ++S + RPG
Sbjct: 62 -----------------------KKLNHEELTQL-------RRERFAKRMESE--KARPG 89
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
V ++ AK G K+ + S++ V L+ IG+ F+ + DDV++ KP+P +
Sbjct: 90 VEAYLNAAKDLGLKIGLASSSDYKWVSGHLKQ-IGL--FDDFEVIQTADDVEEVKPNPEL 146
Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 293
Y+ AAK LG+S +CL EDSV G AA RAGM CVI T F+D
Sbjct: 147 YLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMKCVIVPNKVTGTLMFED 196
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Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 38/213 (17%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
LIFD DG I+++E HR+A+ + H+ ++ D + +LN P
Sbjct: 7 GLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPT--------------- 51
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKL-IDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
W + + + +QA L + KTE + ++ +VEP P L
Sbjct: 52 --WRIAQ------------AIIELNQADLDPHALAREKTEAVRSMLLD-SVEPLP----L 92
Query: 188 MDEAKA-AGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
+D K+ G++ ++S++ L +G+ + D +A D VK KP P ++
Sbjct: 93 VDVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRHY--FDAVVAADHVKHHKPAPDTFLL 150
Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
A+R+G+ C+V ED+ G+QAA AGM V
Sbjct: 151 CAQRMGVQPTQCVVFEDADFGIQAARAAGMDAV 183
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Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 32/219 (14%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A+IFD DGV++++E L+ +AY R S + D L +I G
Sbjct: 1 MEAVIFDMDGVLMDTEPLYFEAYR--------RVAESYGKPYTED------LHRRIMGVP 46
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
+ G P I D + + K + +++K PGV
Sbjct: 47 ER-------EGLP---ILMEALEIKDSLENFKKRVHEEKKRVFSELLKEN-----PGVRE 91
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
++ K+ K+A+ ++ + + L L +E++ D + GD VK KPDP IY+
Sbjct: 92 ALEFVKSKRIKLALATSTPQREALERLRRL-DLEKY--FDVMVFGDQVKNGKPDPEIYLL 148
Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 285
+RL + + +V EDS G++AA AG+ + S
Sbjct: 149 VLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHS 187
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Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P77366|PGMB_ECOLI Beta-phosphoglucomutase OS=Escherichia coli (strain K12) GN=ycjU PE=1 SV=1 | Back alignment and function description |
|---|
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 90/227 (39%), Gaps = 35/227 (15%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNW---DPEFYDVLQNQIG 123
LQ +IFD DGVI ++ HLH QA+ + + D +SL D +LQ+
Sbjct: 3 LQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQH--- 59
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP-RP 182
GGK ++A+L K Y ++ TV P
Sbjct: 60 GGK-------------------EGDFNSQERAQL----AYRKNLLYVHSLRELTVNAVLP 96
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
G+ L+ + +A V + S + + IL +E E +K KPDP
Sbjct: 97 GIRSLLADLRAQQISVGLASVSLNAPTILA-----ALELREFFTFCADASQLKNSKPDPE 151
Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289
I++ A LG+ + C+ +ED+ G+ A +GM V T Q
Sbjct: 152 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQ 198
|
Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. Glucose or lactose are used in preference to maltose, which is only utilized after glucose or lactose has been exhausted. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose. Escherichia coli (strain K12) (taxid: 83333) EC: 5 EC: . EC: 4 EC: . EC: 2 EC: . EC: 6 |
| >sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM PE=1 SV=1 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A+IFD DGVI ++ H A+ H + D + +N
Sbjct: 1 MKAVIFDLDGVITDTAEYHFLAWK----HIAEQIDIPFDRDMN----------------- 39
Query: 127 PKMRWYFKEHGWPSSTIFDNPPV--TDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR-PG 183
+++ +E S IF T+ ++ +L+ K YQ +I T E PG
Sbjct: 40 ERLKGISREESLESILIFGGAETKYTNAEKQELMH----RKNRDYQMLISKLTPEDLLPG 95
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD---VKQKKPD 240
+ RL+ + K K+ + S++ + IL R +D F A D + + KPD
Sbjct: 96 IGRLLCQLKNENIKIGLASSSRNAPKIL--------RRLAIIDDFHAIVDPTTLAKGKPD 147
Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
P I++TAA L +S DC +ED+ G+ A AGM V
Sbjct: 148 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAV 186
|
Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose. Bacillus subtilis (strain 168) (taxid: 224308) EC: 5 EC: . EC: 4 EC: . EC: 2 EC: . EC: 6 |
| >sp|P65070|Y3433_MYCBO Uncharacterized protein Mb3433 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3433 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 21/237 (8%)
Query: 59 RVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAF-SHFNVRCDPSSQQSLNWDPEFYDV 117
RV + ++A +FD DGV+ ++ LH +A+ F ++ R + + ++ + +DP
Sbjct: 15 RVLGLPEKVRACLFDLDGVLTDTASLHTKAWKAMFDAYLAERAERTGEKFVPFDPAAD-- 72
Query: 118 LQNQIGGGKPKMRWYFKEHG---WPSSTIFDNPPVTDDD--QAKLIDLIQDWKTERYQQI 172
+ G K +E G + SS + P + DD A+ + + + K + ++
Sbjct: 73 YHTYVDGKK-------REDGVRSFLSSRAIEIPDGSPDDPGAAETVYGLGNRKNDMLHKL 125
Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF--EGLDCFLA 230
++ + G R ++ AAG VAV S++ + +L G++RF + +D
Sbjct: 126 LRDDGAQVFDGSRRYLEAVTAAGLGVAVVSSSANTRDVLAT---TGLDRFVQQRVDGVTL 182
Query: 231 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287
++ KP P ++ AA+ LG++ V ED++ G+ AA RAG V+ + T
Sbjct: 183 REEHIAGKPAPDSFLRAAELLGVTPDAAAVFEDALSGV-AAGRAGNFAVVVGINRTG 238
|
Mycobacterium bovis (taxid: 1765) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | ||||||
| 255584279 | 309 | 2-deoxyglucose-6-phosphate phosphatase, | 0.956 | 0.990 | 0.743 | 1e-135 | |
| 359496682 | 328 | PREDICTED: protein CbbY-like [Vitis vini | 0.828 | 0.807 | 0.842 | 1e-129 | |
| 356525461 | 323 | PREDICTED: protein CbbY, chromosomal-lik | 0.840 | 0.832 | 0.813 | 1e-129 | |
| 297802106 | 314 | hypothetical protein ARALYDRAFT_912489 [ | 0.943 | 0.961 | 0.728 | 1e-128 | |
| 356512689 | 310 | PREDICTED: protein CbbY, chromosomal-lik | 0.790 | 0.816 | 0.842 | 1e-127 | |
| 18420570 | 316 | haloacid dehalogenase-like hydrolase fam | 0.884 | 0.895 | 0.757 | 1e-126 | |
| 255639539 | 310 | unknown [Glycine max] | 0.790 | 0.816 | 0.838 | 1e-126 | |
| 22022552 | 316 | AT4g39970/T5J17_140 [Arabidopsis thalian | 0.884 | 0.895 | 0.754 | 1e-126 | |
| 21593238 | 316 | unknown [Arabidopsis thaliana] | 0.884 | 0.895 | 0.750 | 1e-125 | |
| 224093744 | 261 | predicted protein [Populus trichocarpa] | 0.768 | 0.942 | 0.850 | 1e-125 |
| >gi|255584279|ref|XP_002532876.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223527361|gb|EEF29505.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/320 (74%), Positives = 275/320 (85%), Gaps = 14/320 (4%)
Query: 3 STVILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALR--FKSNKKPLSLSLTRKALRV 60
++++LSQ S+ S + FS L+ + H ++R F S + SL + V
Sbjct: 2 ASMLLSQ-----SNLSPNPLSRSFSFLSKSQTLHFRSIRRSFPSRRSHQSLCFS-----V 51
Query: 61 SASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN 120
SASS SL+ALIFDCDGVI+ESEHLHRQAYNDAF+HFNVRC +S Q+L W P+FYDVLQN
Sbjct: 52 SASSASLEALIFDCDGVILESEHLHRQAYNDAFAHFNVRC--TSDQTLIWAPDFYDVLQN 109
Query: 121 QIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP 180
+IGGGKPKMRWYFKEHGWPSSTIF+ PP D+ +A LID +QDWKTERY++IIKSGTV+P
Sbjct: 110 RIGGGKPKMRWYFKEHGWPSSTIFETPPEDDESRANLIDTLQDWKTERYKEIIKSGTVQP 169
Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
RPGVL+LMDEAKAAGKK+AVCSAATKSSVILCLENLIGMERF+GLDCFLAGDDVK+KKPD
Sbjct: 170 RPGVLQLMDEAKAAGKKLAVCSAATKSSVILCLENLIGMERFQGLDCFLAGDDVKEKKPD 229
Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300
PSIYVTA+K+LG+SEKDCLVVEDSVIGLQAAT+AGM+CVITYTSSTA+QDFKDAIA+YPD
Sbjct: 230 PSIYVTASKKLGVSEKDCLVVEDSVIGLQAATKAGMSCVITYTSSTADQDFKDAIAMYPD 289
Query: 301 LSNVRLKDLELLLQNVVAAS 320
LSNVRLKDLELLLQNVVAAS
Sbjct: 290 LSNVRLKDLELLLQNVVAAS 309
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359496682|ref|XP_003635299.1| PREDICTED: protein CbbY-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/267 (84%), Positives = 244/267 (91%), Gaps = 2/267 (0%)
Query: 54 TRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPS-SQQSLNWDP 112
T AL VSASS +LQALIFDCDGVI+ESE LHR+AYNDAFSHFNVRC S SQ LNWD
Sbjct: 62 TPNALSVSASS-TLQALIFDCDGVILESEDLHRRAYNDAFSHFNVRCPSSPSQHPLNWDS 120
Query: 113 EFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQI 172
FYD LQN+IGGGKPKMRWYFKE+GWPSST+FD PP D D+AKLID++QDWKTERY++I
Sbjct: 121 HFYDQLQNRIGGGKPKMRWYFKEYGWPSSTVFDTPPEDDGDRAKLIDILQDWKTERYKEI 180
Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD 232
IKSGTVEPRPGVLRLM+E KAAG K+AVCSAATKSSVILCLENLIG+ERF+GLDCFLAGD
Sbjct: 181 IKSGTVEPRPGVLRLMEETKAAGIKLAVCSAATKSSVILCLENLIGIERFQGLDCFLAGD 240
Query: 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK 292
DVK+KKPDPSIY TA KRLG+SEKDCLVVEDSVIGLQAAT AGM+CVITYTSSTA+QDFK
Sbjct: 241 DVKEKKPDPSIYQTAVKRLGVSEKDCLVVEDSVIGLQAATGAGMSCVITYTSSTADQDFK 300
Query: 293 DAIAIYPDLSNVRLKDLELLLQNVVAA 319
DAIAIYPDLSNVRLKDLELLLQNVV A
Sbjct: 301 DAIAIYPDLSNVRLKDLELLLQNVVPA 327
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525461|ref|XP_003531343.1| PREDICTED: protein CbbY, chromosomal-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/273 (81%), Positives = 246/273 (90%), Gaps = 4/273 (1%)
Query: 51 LSLTRKALRVSAS---SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQS 107
S ++ VSAS S SLQALIFDCDGVI+ESEHLHRQAYNDAF HFNVRC SS
Sbjct: 50 FSSKHRSFSVSASASTSNSLQALIFDCDGVILESEHLHRQAYNDAFVHFNVRCPSSSSPG 109
Query: 108 -LNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKT 166
LNWD +FYD LQN IGGGKPKMRWYFKEHGWP+ST+F PP D+D+AKLID +QDWKT
Sbjct: 110 PLNWDVQFYDELQNLIGGGKPKMRWYFKEHGWPTSTLFQTPPTNDEDRAKLIDTLQDWKT 169
Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226
ERY++IIKSGTV+PRPGVLRLMDEA+ AGKK+AVCSAATKSSVILCLENLIG+ERF+GLD
Sbjct: 170 ERYKEIIKSGTVKPRPGVLRLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQGLD 229
Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286
CFLAGDDVK+KKPDPSIYVTA+K+LGISEKDCLVVEDSVIGLQAAT+AGM+CV+TYT ST
Sbjct: 230 CFLAGDDVKEKKPDPSIYVTASKKLGISEKDCLVVEDSVIGLQAATQAGMSCVVTYTPST 289
Query: 287 AEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAA 319
AEQDFK+AIAIYPDLSNVRLKDLELLLQ+VVAA
Sbjct: 290 AEQDFKEAIAIYPDLSNVRLKDLELLLQDVVAA 322
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297802106|ref|XP_002868937.1| hypothetical protein ARALYDRAFT_912489 [Arabidopsis lyrata subsp. lyrata] gi|297314773|gb|EFH45196.1| hypothetical protein ARALYDRAFT_912489 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/309 (72%), Positives = 266/309 (86%), Gaps = 7/309 (2%)
Query: 13 LSSSSSSTTTTAKFSSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSA-SSQSLQALI 71
S S++ +++ + SSL P F T LRFKS SL + VSA S+SL+ALI
Sbjct: 12 FSPSTAGSSSVSSSSSLIGLPRFQT--LRFKSR----SLYSKSRVSPVSALPSRSLEALI 65
Query: 72 FDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW 131
FDCDGVI+ESE+LHRQAYNDAFSHF+VRC PSS +SLNW EFYD QN +GGGKPKMRW
Sbjct: 66 FDCDGVILESENLHRQAYNDAFSHFDVRCPPSSSESLNWSLEFYDKFQNLVGGGKPKMRW 125
Query: 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEA 191
YFKE+GWP+STIF++PP DDD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEA
Sbjct: 126 YFKENGWPTSTIFESPPENDDDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEA 185
Query: 192 KAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL 251
KAAGKK+AVCSAATKSSVILCLENLI +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++L
Sbjct: 186 KAAGKKLAVCSAATKSSVILCLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKL 245
Query: 252 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 311
G+S KDCLV+EDSVIGLQAAT+AGM+CVITYTSST++QDF DAIA+YPDLSNV+LKDLE
Sbjct: 246 GVSVKDCLVIEDSVIGLQAATKAGMSCVITYTSSTSDQDFNDAIAVYPDLSNVKLKDLET 305
Query: 312 LLQNVVAAS 320
LLQ +V A+
Sbjct: 306 LLQTIVTAA 314
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512689|ref|XP_003525049.1| PREDICTED: protein CbbY, chromosomal-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/254 (84%), Positives = 236/254 (92%), Gaps = 1/254 (0%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQS-LNWDPEFYDVLQNQIGGG 125
LQALIFDCDGVI+ESEHLHRQAYNDAF HFNVRC SS LNWD +FYD LQN IGGG
Sbjct: 56 LQALIFDCDGVILESEHLHRQAYNDAFVHFNVRCPSSSSPGPLNWDVQFYDELQNLIGGG 115
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
KPKMRWYFKEHGWP ST+F+ PP D+D+AKLID +QDWKTERY++IIKSGTV+PRPGVL
Sbjct: 116 KPKMRWYFKEHGWPKSTLFETPPTNDEDRAKLIDTLQDWKTERYKEIIKSGTVKPRPGVL 175
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
RLMDEA+ AGKK+AVCSAATKSSVILCLENLIG+ERF+GLDCFLAGDDVK+KKP PSIYV
Sbjct: 176 RLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQGLDCFLAGDDVKEKKPSPSIYV 235
Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 305
TA+K+LGISEKDCLVVEDSVIGLQAAT+AGM+CV+TYT STAEQDFK+AIAIYPDLSNVR
Sbjct: 236 TASKKLGISEKDCLVVEDSVIGLQAATQAGMSCVVTYTPSTAEQDFKEAIAIYPDLSNVR 295
Query: 306 LKDLELLLQNVVAA 319
LKDLELLLQ+VVAA
Sbjct: 296 LKDLELLLQDVVAA 309
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420570|ref|NP_568077.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] gi|51969804|dbj|BAD43594.1| unnamed protein product [Arabidopsis thaliana] gi|51969872|dbj|BAD43628.1| unnamed protein product [Arabidopsis thaliana] gi|51970306|dbj|BAD43845.1| unnamed protein product [Arabidopsis thaliana] gi|332661747|gb|AEE87147.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/289 (75%), Positives = 255/289 (88%), Gaps = 6/289 (2%)
Query: 33 PIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQAYND 91
P F T LRFKS S +R + VSA +SL+ALIFDCDGVI+ESE+LHRQAYND
Sbjct: 33 PRFQT--LRFKSRS---VYSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQAYND 87
Query: 92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
AFSHF+VRC PSS +SL+W EFYD QN +GGGKPKMRWYFKE+GWP+STIFD+PP D
Sbjct: 88 AFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQND 147
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
DD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKSSVIL
Sbjct: 148 DDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVIL 207
Query: 212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
CLENLI +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++LG+S KDCLVVEDSVIGLQAA
Sbjct: 208 CLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVEDSVIGLQAA 267
Query: 272 TRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 320
T+AGM+CVITYTSST++Q+F DAIA+YPDLSNV+LKDLE LLQ +V A+
Sbjct: 268 TKAGMSCVITYTSSTSDQNFNDAIAVYPDLSNVKLKDLETLLQTIVTAA 316
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255639539|gb|ACU20064.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/254 (83%), Positives = 235/254 (92%), Gaps = 1/254 (0%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQS-LNWDPEFYDVLQNQIGGG 125
LQALIFDCDGVI+ESEHLHRQAYNDAF HFNVRC SS LNWD +FYD LQN IGGG
Sbjct: 56 LQALIFDCDGVILESEHLHRQAYNDAFVHFNVRCPSSSSPGPLNWDVQFYDELQNLIGGG 115
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
KPKMRWYFKEHGWP ST+F+ PP D+D+AKLID +QDWKTERY++IIKSGT +PRPGVL
Sbjct: 116 KPKMRWYFKEHGWPKSTLFETPPTNDEDRAKLIDTLQDWKTERYKEIIKSGTAKPRPGVL 175
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
RLMDEA+ AGKK+AVCSAATKSSVILCLENLIG+ERF+GLDCFLAGDDVK+KKP PSIYV
Sbjct: 176 RLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQGLDCFLAGDDVKEKKPSPSIYV 235
Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 305
TA+K+LGISEKDCLVVEDSVIGLQAAT+AGM+CV+TYT STAEQDFK+AIAIYPDLSNVR
Sbjct: 236 TASKKLGISEKDCLVVEDSVIGLQAATQAGMSCVVTYTPSTAEQDFKEAIAIYPDLSNVR 295
Query: 306 LKDLELLLQNVVAA 319
LKDLELLLQ+VVAA
Sbjct: 296 LKDLELLLQDVVAA 309
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22022552|gb|AAM83233.1| AT4g39970/T5J17_140 [Arabidopsis thaliana] gi|23505871|gb|AAN28795.1| At4g39970/T5J17_140 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/289 (75%), Positives = 255/289 (88%), Gaps = 6/289 (2%)
Query: 33 PIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQAYND 91
P F T LRFKS S +R + VSA +SL+ALIFDCDGVI+ESE+LHRQAYND
Sbjct: 33 PRFQT--LRFKSRS---VYSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQAYND 87
Query: 92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
AFSHF+VRC PSS +SL+W EFYD QN +GGGKPKMRWYFKE+GWP+STIFD+PP D
Sbjct: 88 AFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQND 147
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
DD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKSSVIL
Sbjct: 148 DDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVIL 207
Query: 212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
CLENLI +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++LG+S KDCLVVEDSVIGLQAA
Sbjct: 208 CLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVEDSVIGLQAA 267
Query: 272 TRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 320
T+AGM+CVITYTSST++Q+F DAIA+YPDLSNV+LKDL+ LLQ +V A+
Sbjct: 268 TKAGMSCVITYTSSTSDQNFNDAIAVYPDLSNVKLKDLKTLLQTIVTAA 316
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21593238|gb|AAM65187.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/289 (75%), Positives = 253/289 (87%), Gaps = 6/289 (2%)
Query: 33 PIFHTNALRFKSNKKPLSLSLTRKALRVSA-SSQSLQALIFDCDGVIIESEHLHRQAYND 91
P F T LRFKS S +R + VSA S+SL+ALIFDCDGVI+ESE+LHRQAYND
Sbjct: 33 PRFQT--LRFKSRS---VYSKSRASSPVSALPSRSLEALIFDCDGVILESENLHRQAYND 87
Query: 92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
AFSHF+VRC PSS SL+W EFYD QN +GGGKPKMRWYFKE+GWP+STIFD+PP D
Sbjct: 88 AFSHFDVRCPPSSSASLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQND 147
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
DD+AKLID +QDWKT+RY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKSSVIL
Sbjct: 148 DDRAKLIDTLQDWKTDRYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVIL 207
Query: 212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
CLENL+ +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++LG+S KDCLVV DSVIGLQAA
Sbjct: 208 CLENLLDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVGDSVIGLQAA 267
Query: 272 TRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 320
T+AGM+CVITYTSST++QDF DAIA+YPDLSNV+L DLE LLQ +V A+
Sbjct: 268 TKAGMSCVITYTSSTSDQDFNDAIAVYPDLSNVKLTDLETLLQTIVTAA 316
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224093744|ref|XP_002309972.1| predicted protein [Populus trichocarpa] gi|222852875|gb|EEE90422.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 211/248 (85%), Positives = 231/248 (93%), Gaps = 2/248 (0%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
L+ALIFDCDGVI+ESEHLHRQAYNDAF+HFNV C SS LNW P+FYDVLQN+IGGGK
Sbjct: 16 LEALIFDCDGVILESEHLHRQAYNDAFAHFNVIC--SSSLPLNWSPDFYDVLQNRIGGGK 73
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
PKMRWYFKEHGWPSS +F+ PP D+ +AKLID +QDWKTERY++IIKSGTVEPRPGVLR
Sbjct: 74 PKMRWYFKEHGWPSSNLFEKPPEDDESRAKLIDTLQDWKTERYKEIIKSGTVEPRPGVLR 133
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
LMDEAK AGKK+AVCSAATKSSVILCLENLIGMERF+GLDCFLAGDDVK+KKPDPSIYVT
Sbjct: 134 LMDEAKTAGKKLAVCSAATKSSVILCLENLIGMERFQGLDCFLAGDDVKEKKPDPSIYVT 193
Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL 306
A+K LG+SE+DCLVVEDSVIGLQAAT AGM+CVITYT STA+QDFKDAIAIYPDLSNVRL
Sbjct: 194 ASKMLGVSERDCLVVEDSVIGLQAATTAGMSCVITYTPSTADQDFKDAIAIYPDLSNVRL 253
Query: 307 KDLELLLQ 314
KDLELLLQ
Sbjct: 254 KDLELLLQ 261
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | ||||||
| TAIR|locus:2140050 | 316 | AT4G39970 [Arabidopsis thalian | 0.884 | 0.895 | 0.757 | 4.4e-116 | |
| TAIR|locus:2101165 | 319 | AT3G48420 [Arabidopsis thalian | 0.762 | 0.764 | 0.389 | 1.6e-40 | |
| TIGR_CMR|GSU_1839 | 228 | GSU_1839 "hydrolase, haloacid | 0.443 | 0.622 | 0.348 | 2.7e-20 | |
| TIGR_CMR|BA_4427 | 221 | BA_4427 "hydrolase, haloacid d | 0.603 | 0.873 | 0.276 | 1e-19 | |
| UNIPROTKB|P77475 | 188 | yqaB [Escherichia coli K-12 (t | 0.337 | 0.574 | 0.318 | 1.1e-17 | |
| UNIPROTKB|Q9KN63 | 219 | VC_A0102 "CbbY family protein" | 0.353 | 0.515 | 0.333 | 2.7e-16 | |
| TIGR_CMR|VC_A0102 | 219 | VC_A0102 "haloacid dehalogenas | 0.353 | 0.515 | 0.333 | 2.7e-16 | |
| TAIR|locus:2010728 | 1055 | AT1G56500 [Arabidopsis thalian | 0.45 | 0.136 | 0.337 | 1.1e-15 | |
| TIGR_CMR|DET_0395 | 456 | DET_0395 "glycoprotease family | 0.471 | 0.331 | 0.320 | 5.3e-15 | |
| TIGR_CMR|SO_0431 | 217 | SO_0431 "HAD-superfamily hydro | 0.390 | 0.576 | 0.316 | 4.7e-13 |
| TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1144 (407.8 bits), Expect = 4.4e-116, P = 4.4e-116
Identities = 219/289 (75%), Positives = 255/289 (88%)
Query: 33 PIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQAYND 91
P F T LRFKS S +R + VSA +SL+ALIFDCDGVI+ESE+LHRQAYND
Sbjct: 33 PRFQT--LRFKSRSV---YSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQAYND 87
Query: 92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
AFSHF+VRC PSS +SL+W EFYD QN +GGGKPKMRWYFKE+GWP+STIFD+PP D
Sbjct: 88 AFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQND 147
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
DD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKSSVIL
Sbjct: 148 DDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVIL 207
Query: 212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
CLENLI +ERF+GLDCFLAGDDVK+KKPDPSIY+TAA++LG+S KDCLVVEDSVIGLQAA
Sbjct: 208 CLENLIDIERFQGLDCFLAGDDVKEKKPDPSIYITAAEKLGVSVKDCLVVEDSVIGLQAA 267
Query: 272 TRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 320
T+AGM+CVITYTSST++Q+F DAIA+YPDLSNV+LKDLE LLQ +V A+
Sbjct: 268 TKAGMSCVITYTSSTSDQNFNDAIAVYPDLSNVKLKDLETLLQTIVTAA 316
|
|
| TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 104/267 (38%), Positives = 157/267 (58%)
Query: 40 LRF--KSNK-KPLSLSLTRKALRVSASSQSL----QALIFDCDGVIIESEHL-HRQAYND 91
LRF KS + KP+ +R ++S SL AL+FDCDGV++++E HR ++ND
Sbjct: 42 LRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFND 101
Query: 92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
F ++ ++ WD + Y L +IGGGK +M YF + GWP + P +
Sbjct: 102 TFKERDL--------NVTWDVDLYGELL-KIGGGKERMTAYFNKVGWP-----EKAPKDE 147
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
++ + I + KTE + +I+ + RPGV +L+D+A G KVAVCS + + +V
Sbjct: 148 AERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSA 207
Query: 212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
+ L+G ER E + F AGD V +KKPDP+IY AA+ LG+ C+VVEDS IGL AA
Sbjct: 208 IVSCLLGPERAEKIKIF-AGDVVPKKKPDPAIYNLAAETLGVDPSKCVVVEDSAIGLAAA 266
Query: 272 TRAGMACVITYTSSTAEQDFKDAIAIY 298
AGM C++T + TA++DF++A A++
Sbjct: 267 KAAGMTCIVTKSGYTADEDFENADAVF 293
|
|
| TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 187 (70.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 54/155 (34%), Positives = 79/155 (50%)
Query: 165 KTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224
K +Q+II SG V P PGV+ L+ KA VA+CS A +S ++ LE L G+
Sbjct: 76 KAAAFQEIIASG-VTPYPGVVELIRNIKA-NHPVALCSGALRSDILPILEGL-GLSGI-- 130
Query: 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLG-------ISEKDCLVVEDSVIGLQAATRAGMA 277
D + D+V KPDP+ Y A +RL I + C+ +ED+ G+ +AT AG+
Sbjct: 131 FDVMVTADEVSASKPDPASYALAVRRLTAAFPNRQIRPETCIAIEDTPAGIASATGAGIG 190
Query: 278 CVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 312
V+ T+S A + L++V L DL L
Sbjct: 191 -VLAVTNSYPAVRLGGARRVVDSLADVGLADLAAL 224
|
|
| TIGR_CMR|BA_4427 BA_4427 "hydrolase, haloacid dehalogenase-like family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 58/210 (27%), Positives = 108/210 (51%)
Query: 110 WDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD--NPPVTDD-DQAKLIDLIQDWKT 166
W F D ++ + GG P + + K G +++ N + + D+ L + +++
Sbjct: 20 WFHSFRDAVR-EYGGDLP-LEEFAKCIGTTDDVLYEYLNEQLKEKFDKYALKEKVKNLHK 77
Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226
E+ + E R GV ++EAK G K+A+ S++++ VI LE L + FE +
Sbjct: 78 EKMK------IPEARDGVKEYLEEAKEMGLKIALASSSSREWVIPFLEELQIRDYFEVIK 131
Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286
+DV++ KPDP++Y A + LGI + + EDS+ GL+AA AG+ CV+ T
Sbjct: 132 ---TREDVEKVKPDPALYRVAIEDLGIDSSEAVAFEDSLNGLKAAIAAGLTCVVVPNDVT 188
Query: 287 AEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316
F++ + + +++ K L+ ++QN+
Sbjct: 189 RNLPFENH---HLRIESMKDKSLKEVMQNI 215
|
|
| UNIPROTKB|P77475 yqaB [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 146 (56.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 37/116 (31%), Positives = 61/116 (52%)
Query: 165 KTERYQQIIKSGTVEPRPGVLRLMDEAKA-AGKKVAVCSAATKSSVILCLENLIGMERFE 223
KTE + ++ +VEP P L+D K+ G++ ++S++ L +G+ +
Sbjct: 75 KTEAVRSMLLD-SVEPLP----LVDVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRHY- 128
Query: 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
D +A D VK KP P ++ A+R+G+ C+V ED+ G+QAA AGM V
Sbjct: 129 -FDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGMDAV 183
|
|
| UNIPROTKB|Q9KN63 VC_A0102 "CbbY family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 165 (63.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 39/117 (33%), Positives = 64/117 (54%)
Query: 160 LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219
L +W+ +RY ++ + + GV+ L++ KA VAV ++ K ++ L+ L G+
Sbjct: 70 LHNEWR-QRYNAVVMHEAIPHKDGVIALLEWLKARSIPVAVATSTQKEVALIKLQ-LAGL 127
Query: 220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
+ + G +V Q KP P IY+ AA+RLG+ + CL EDS G++AA A M
Sbjct: 128 DHY--FANITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182
|
|
| TIGR_CMR|VC_A0102 VC_A0102 "haloacid dehalogenase/epoxide hydrolase family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 165 (63.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 39/117 (33%), Positives = 64/117 (54%)
Query: 160 LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219
L +W+ +RY ++ + + GV+ L++ KA VAV ++ K ++ L+ L G+
Sbjct: 70 LHNEWR-QRYNAVVMHEAIPHKDGVIALLEWLKARSIPVAVATSTQKEVALIKLQ-LAGL 127
Query: 220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
+ + G +V Q KP P IY+ AA+RLG+ + CL EDS G++AA A M
Sbjct: 128 DHY--FANITTGCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182
|
|
| TAIR|locus:2010728 AT1G56500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 192 (72.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 52/154 (33%), Positives = 79/154 (51%)
Query: 163 DWKTERYQQIIKSGTVEPR-----PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI 217
D ER+ +I +P PG L L+ E K G KVAV S+A + V L+
Sbjct: 139 DAAKERFFEIYLDKYAKPESGIGFPGALELVTECKNKGLKVAVASSADRIKVDANLK-AA 197
Query: 218 GMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 277
G+ D ++ D + KP P I++ AAK LG+ +C+V+ED++ G+QAA A M
Sbjct: 198 GLS-LTMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAAQAANMR 256
Query: 278 CVITYTSSTAEQDFKDA--IAIYPDLSNVRLKDL 309
C+ T+ +E KDA I D+ N+ + D+
Sbjct: 257 CIAVKTT-LSEAILKDAGPSMIRDDIGNISINDI 289
|
|
| TIGR_CMR|DET_0395 DET_0395 "glycoprotease family protein/hydrolase, beta-phosphoglucomutase family" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 52/162 (32%), Positives = 88/162 (54%)
Query: 151 DDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI 210
+ A I + D K +++ ++ PGV+ L+ K AG ++A+ S+A +++
Sbjct: 293 EKSDADTIHTLADRKEHLFREYAGQ-EIQLFPGVIELLKSLKTAGYRMAIASSAPLANIK 351
Query: 211 LCLENLIGMERFEGLDCFLAG---DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267
L + L G+ G D FLA DV + KP+P I++ +A RL S ++CLV+ED+ G
Sbjct: 352 LVMTKL-GI----G-DYFLATVSEKDVTKGKPNPQIFLLSAARLCASPEECLVIEDAPAG 405
Query: 268 LQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 309
++AA +AGM C I T+S Q +A I L + ++D+
Sbjct: 406 VEAAKKAGMKC-IAVTNSQQPQALSEADMIVDTLGKISVEDI 446
|
|
| TIGR_CMR|SO_0431 SO_0431 "HAD-superfamily hydrolase, subfamily IA, variant 3 protein family" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 145 (56.1 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSA 203
+ P D D AK+ I D E +I+++G EP PGV + M +A G K+ +
Sbjct: 60 YHKAPWADYDNAKVSKTIVDKVAE---EILQTG--EPMPGVQQAMAYCQAKGLKIGL--- 111
Query: 204 ATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK---KPDPSIYVTAAKRLGISEKDCLV 260
AT S +L ++ ++ + +G F+A + + KP P +Y+ A LG+ + CL
Sbjct: 112 ATSSPTVL-IDAVLARLKLKGQ--FMAVESAEALTYGKPHPEVYLNCATALGVDPRYCLA 168
Query: 261 VEDSVIGLQAATRAGMACV 279
+EDS G+ AA A M V
Sbjct: 169 IEDSFNGIIAARAANMQTV 187
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 320 | |||
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 1e-151 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 4e-41 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 1e-28 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 6e-22 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 7e-22 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 2e-20 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 4e-19 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 8e-19 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 1e-17 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 1e-17 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 1e-14 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 5e-14 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 2e-13 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 7e-13 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 1e-11 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 4e-11 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 5e-11 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 2e-09 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 3e-09 | |
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 2e-08 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 1e-07 | |
| TIGR01454 | 205 | TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic | 2e-07 | |
| PLN02770 | 248 | PLN02770, PLN02770, haloacid dehalogenase-like hyd | 4e-07 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 5e-07 | |
| PRK11587 | 218 | PRK11587, PRK11587, putative phosphatase; Provisio | 2e-06 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 8e-06 | |
| TIGR03351 | 220 | TIGR03351, PhnX-like, phosphonatase-like hydrolase | 2e-05 | |
| PRK13226 | 229 | PRK13226, PRK13226, phosphoglycolate phosphatase; | 2e-05 | |
| PLN02575 | 381 | PLN02575, PLN02575, haloacid dehalogenase-like hyd | 3e-05 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 5e-05 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 2e-04 | |
| TIGR01422 | 253 | TIGR01422, phosphonatase, phosphonoacetaldehyde hy | 3e-04 | |
| TIGR01548 | 197 | TIGR01548, HAD-SF-IA-hyp1, haloacid dehalogenase s | 6e-04 | |
| COG2179 | 175 | COG2179, COG2179, Predicted hydrolase of the HAD s | 0.001 | |
| PRK13478 | 267 | PRK13478, PRK13478, phosphonoacetaldehyde hydrolas | 0.001 | |
| TIGR01428 | 198 | TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo | 0.002 | |
| TIGR01662 | 132 | TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, | 0.003 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 425 bits (1095), Expect = e-151
Identities = 132/291 (45%), Positives = 183/291 (62%), Gaps = 15/291 (5%)
Query: 35 FHTNALRFKSNKKPLSLSLTRKALRV----SASSQSLQALIFDCDGVIIESE-HLHRQAY 89
+ L S + R +++S +AL+FDCDGV++E+E HR A+
Sbjct: 4 SSSARLASASRTRAGRRRRRRSRSTARVASASASALPEALLFDCDGVLVETERDGHRVAF 63
Query: 90 NDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPV 149
NDAF F +R + WD E YD L N IGGGK +M WYF E+GWP+STI + P
Sbjct: 64 NDAFKEFGLR-------PVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTI-EKAPK 114
Query: 150 TDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV 209
++++ +L+D + D KTE ++++I+SG + RPGVLRLMDEA AAG KVAVCS + + +V
Sbjct: 115 DEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAV 174
Query: 210 ILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQ 269
+ L+G ER +GLD F AGDDV +KKPDP IY AA+ LG+ C+VVEDSVIGLQ
Sbjct: 175 SKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQ 233
Query: 270 AATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 320
AA AGM C++T +S TA++DF A A++ L +V L+D +LL +
Sbjct: 234 AAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFDLLFCESLLTK 284
|
Length = 286 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 4e-41
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 34/248 (13%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A+IFD DG +++SE LH +A+ +A + + + ++ GGG
Sbjct: 2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISD-------------EEIRELHGGGI 48
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK-SGTVEPRPGVL 185
+ D + Y+ ++P PGV+
Sbjct: 49 AR--------IIDLLRKLAAGEDPADLAEL--------ERLLYEAEALELEGLKPIPGVV 92
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
L+++ KA G +AV S++ + + L L ++ F D + DDV + KP P IY+
Sbjct: 93 ELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF---DVIVTADDVARGKPAPDIYL 149
Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 305
AA+RLG+ ++C+VVEDS G+QAA AGM V + A D +
Sbjct: 150 LAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG-VPAGHDRPHLDPLDAHGADTVLLD 208
Query: 306 LKDLELLL 313
L +L LL
Sbjct: 209 LAELPALL 216
|
Length = 221 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-28
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 36/216 (16%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+A+IFD DGVI ++ LH QA+ + + + D +SL G
Sbjct: 1 YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESL---------------KGL 45
Query: 127 PKM---RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
+ R K G S A+ K E Y+++++ V PG
Sbjct: 46 SREDILRAILKLRGDGLS------LEEIHQLAER-------KNELYRELLRLTGVAVLPG 92
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
+ L+ KA G V + S++ + IL L + F D + +VK KP P
Sbjct: 93 IRNLLKRLKAKGIAVGLGSSSKNAPRILAKLGLR--DYF---DAIVDASEVKNGKPHPET 147
Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
++ AA+ LG+ +C+V ED++ G+QAA AGM V
Sbjct: 148 FLLAAELLGVPPNECIVFEDALAGVQAARAAGMFAV 183
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 90.8 bits (226), Expect = 6e-22
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
A+IFD DGVI ++ H A+ + + + +D EF + L+ G + +
Sbjct: 1 AVIFDLDGVITDTAEYHYLAWKHL----------ADELGIPFDEEFNESLK---GVSREE 47
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP-RPGVLRL 187
+ G +++++ +L + K + Y +++K T PG+ L
Sbjct: 48 SLERILDLG--------GKKYSEEEKEELAER----KNDYYVELLKELTPADVLPGIKSL 95
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA---GDDVKQKKPDPSIY 244
+ + K K+A+ SA+ + IL E+ E +D F A ++K+ KPDP I+
Sbjct: 96 LADLKKNNIKIALASASKNAPTIL--------EKLELIDYFDAIVDPAELKKGKPDPEIF 147
Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
+ AA+ LG+S +C+ +ED+ G++A AGM V
Sbjct: 148 LAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV 182
|
This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 7e-22
Identities = 56/253 (22%), Positives = 108/253 (42%), Gaps = 37/253 (14%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
++A++FD DG +++S +A+N A + P + ++ IG
Sbjct: 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELG------------LPPLDEEEIRQLIGL 49
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
G ++ I D++ A +L++ + E + PGV
Sbjct: 50 GLDEL-------------IERLLGEADEEAA--AELVERLREEFLTAYAELLESRLFPGV 94
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
L+ K+AG K+ + + + + + L+ L + F D + GDDV KPDP
Sbjct: 95 KELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDVPPPKPDPEPL 151
Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKD-AIAIYPDLS 302
+ ++LG+ ++ L+V DS+ + AA AG+ V +T+ ++ E+ + A + L+
Sbjct: 152 LLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLA 211
Query: 303 NVRLKDLELLLQN 315
+L LL
Sbjct: 212 -----ELLALLAE 219
|
Length = 220 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 86.3 bits (214), Expect = 2e-20
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 36/211 (17%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
A++FD DGV++++ H + + A + + L+ +
Sbjct: 1 AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPD-----ELGV----SEVGSLELAL------ 45
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
RW K ++ +D L + Y+ + K G P PGV L+
Sbjct: 46 RRWKAKYGR----------TMSAEDAQLLYKQLF------YEALEKEGLK-PLPGVRALL 88
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
+ +A GKK+A+ + + ++ L LE +G+ D + DV KPDP IY+ A
Sbjct: 89 EALRARGKKLALLTNSPRADAKLVLE--LGLRAL--FDVVIDSSDVGLGKPDPDIYLQAL 144
Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
K+LG+ +CL V+DS G+ AA AGM V
Sbjct: 145 KKLGLKPSECLFVDDSPAGIDAAKAAGMHTV 175
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 4e-19
Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 38/211 (18%)
Query: 70 LIFDCDGVIIESEHLHRQAYND-AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
+IFD DG +I+ + + +A D A + D ++ + GG P
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGL------------DISAEELREA---GGLPF 45
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ + P+ D E + +EP P V+ L+
Sbjct: 46 DEAL--------ADLLREHPID-----------PDEILEALLEYNLESRLEPFPDVVELL 86
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
KA G K+ + S ++ +V LE L ++ F D DDV +KPDP Y
Sbjct: 87 RRLKAKGVKLVILSNGSREAVERLLEKLGLLDLF---DAVFTSDDVGARKPDPEAYERVL 143
Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
+RLG+ ++ L ++DS L+AA AG+ V
Sbjct: 144 ERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174
|
Length = 176 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 82.3 bits (203), Expect = 8e-19
Identities = 48/209 (22%), Positives = 76/209 (36%), Gaps = 26/209 (12%)
Query: 69 ALIFDCDGVIIESEHLH--RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
A++FD DG + + E + +A +A + V N E + L ++
Sbjct: 3 AVVFDLDGTLTDGEPVVPEAEALLEAAAALGV--AIVIAAGENLTKEGREELVRRLLLRA 60
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
+E +T+ V D LI L T PG
Sbjct: 61 LAGEELLEELLRAGATVVA---VLDLVVLGLIAL----------------TDPLYPGARE 101
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
+ E K AG K+A+ + + + L F+ L V KPDP I+
Sbjct: 102 ALKELKEAGIKLAILTGDNRLTANAIARLLGL---FDALVSADLYGLVGVGKPDPKIFEL 158
Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAG 275
A + LG+ ++ L+V D V + AA AG
Sbjct: 159 ALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 1e-17
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
LIFD DG I+++E HR+A+ + + ++ D + +LN G P
Sbjct: 6 AGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALN---------------GSP 50
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLID--LIQDWKTERYQQIIKSGTVEPRPGVL 185
W + + + +QA L D + KTE + ++ +VEP P
Sbjct: 51 T--WRIAQ------------AIIELNQADL-DPHALAREKTEAVKSMLLD-SVEPLP--- 91
Query: 186 RLMDEAKA-AGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
L++ KA G++ ++S++ L +G+ R+ D +A DDV+ KP P +
Sbjct: 92 -LIEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRY--FDAVVAADDVQHHKPAPDTF 148
Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
+ A+ +G+ C+V ED+ G+QAA AGM V
Sbjct: 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAV 183
|
Length = 188 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 1e-17
Identities = 84/325 (25%), Positives = 130/325 (40%), Gaps = 63/325 (19%)
Query: 2 ASTVILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALRFKS-----NKKPLSLSLTRK 56
S + + ++ S + + R KS K + T +
Sbjct: 12 FSWPRRHCAGDFPPALAFASSIRGRRSRSGVWLGKNGGARSKSCAKVEEKSRGAEIATEE 71
Query: 57 ALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYD 116
+VSA ++FD DGV+ SE R+A D F+ V ++ P F
Sbjct: 72 WGKVSA-------VLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVE-----DFVP-FMG 118
Query: 117 VLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSG 176
+ GG ++ D D AK +R+ +I
Sbjct: 119 TGEANFLGGVASVK---------------GVKGFDPDAAK----------KRFFEIYLEK 153
Query: 177 TVEPR-----PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-----D 226
+P PG L L+ + K G KVAV S+A + V NL GL D
Sbjct: 154 YAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVD---ANLAA----AGLPLSMFD 206
Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286
++ D + KP P I++ AAK LG+ +C+V+ED++ G+QAA AGM C I T++
Sbjct: 207 AIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRC-IAVTTTL 265
Query: 287 AEQDFKDA--IAIYPDLSNVRLKDL 309
+E+ KDA I D+ N+ L D+
Sbjct: 266 SEEILKDAGPSLIRKDIGNISLSDI 290
|
Length = 1057 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 1e-14
Identities = 67/261 (25%), Positives = 108/261 (41%), Gaps = 57/261 (21%)
Query: 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
++ + + A IFD DG++I+SE L +A D + SL D + L +
Sbjct: 2 STPRQILAAIFDMDGLLIDSEPLWDRAELDVMA------------SLGVDISRREELPDT 49
Query: 122 IGGGKPKMR-------WYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK 174
+G +R WY + W V A++I LI++
Sbjct: 50 LG-----LRIDQVVDLWYAR-QPWNG---PSRQEVVQRIIARVISLIEE----------- 89
Query: 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA---G 231
T PGV + KA G K+ + SA S + LE ++ M F+ D F A
Sbjct: 90 --TRPLLPGVREALALCKAQGLKIGLASA----SPLHMLEAVLTM--FDLRDYFDALASA 141
Query: 232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 291
+ + KP P +Y+ A +LG+ C+ +EDS G+ AA A M ++ A +
Sbjct: 142 EKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVV----PAPEQQ 197
Query: 292 KDAIAIYPDLSNVRLKDLELL 312
D L++V+L+ L L
Sbjct: 198 NDPRWA---LADVKLESLTEL 215
|
Length = 222 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 5e-14
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227
Y+++ T PGV + +A G ++ + + LE L + F L
Sbjct: 75 HYEEVAGELT-SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVL-- 131
Query: 228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM-ACVITY 282
+ GD + Q+KP P + AA+RLG++ + + V DS + +QAA AG + ++TY
Sbjct: 132 -IGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTY 186
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 2e-13
Identities = 48/257 (18%), Positives = 87/257 (33%), Gaps = 34/257 (13%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSL-NWDPEFYDVLQNQIG 123
++A++FD DG +++ + +A F+ V L + L+ +
Sbjct: 2 MMIKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGE-- 59
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
Y E+G + + D + +L+++ + + P
Sbjct: 60 --------YTGEYGLTLERLLELLERLLGD--EDAELVEELLAALAKLL------PDYPE 103
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
L + E K + + + L L ++ F D +DV KPDP I
Sbjct: 104 ALEALKELGKKYKLGIL-TNGARPHQERKLRQLGLLDYF---DAVFISEDVGVAKPDPEI 159
Query: 244 YVTAAKRLGISEKDCLVVEDS---VIGLQAATRAGM-ACVITYTSSTAEQDFKDAIAIYP 299
+ A ++LG+ ++ L V DS I A GM I P
Sbjct: 160 FEYALEKLGVPPEEALFVGDSLENDI--LGARALGMKTVWINRGGKPLPDAL-----EAP 212
Query: 300 DLSNVRLKDLELLLQNV 316
D L +L LL+ +
Sbjct: 213 DYEISSLAELLDLLERL 229
|
Length = 229 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 7e-13
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK 237
++ PG RL+ K+ G +A+ S + ++++ + G + E + GD+V++
Sbjct: 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK--ESFSVIVGGDEVEKG 149
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 297
KP P I++ AAKRL + +CLV+EDS+ G+ A AGM + + + A +
Sbjct: 150 KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEV 209
Query: 298 YPDLSNVR 305
L +++
Sbjct: 210 INSLLDLQ 217
|
Length = 382 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 1e-11
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 45/217 (20%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
++A+ FDCDG +++SE + +AY F+ F + +V + G
Sbjct: 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLE------------EVFKRFKG-- 48
Query: 126 KPKMRWY------FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVE 179
++ Y KEHG + + PV + A+L D +E
Sbjct: 49 ---VKLYEIIDIISKEHGV-TLAKAELEPVYRAEVARLFDS----------------ELE 88
Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKP 239
P G L++ + V S S + L GM + D +G D+++ KP
Sbjct: 89 PIAGANALLESITVP---MCVVSNGPVSKMQHSL-GKTGMLHYFP-DKLFSGYDIQRWKP 143
Query: 240 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 276
DP++ AA+ + ++ ++C++V+DS G Q+ AGM
Sbjct: 144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGM 180
|
Length = 221 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 61.4 bits (150), Expect = 4e-11
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS-AATKSSVILCLENLIGM-ERFEG 224
Y + + G+ PGV + KAAG +AV + T L LE L G+ + F
Sbjct: 82 RHYAENVAGGSR-LYPGVKETLAALKAAGYPLAVVTNKPTPFVAPL-LEAL-GIADYFSV 138
Query: 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI-TY 282
+ + GD + KKPDP+ + A ++LG+ ++ L V DS +QAA AG V TY
Sbjct: 139 V---IGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTY 194
|
Length = 226 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 5e-11
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Query: 172 IIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL------ 225
I + +E PGV + E K G K+A+ + ++ V+ LE L + F+ +
Sbjct: 17 IAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGA 76
Query: 226 -------DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 278
FL G KP+P + A K LG+ ++ L+V DS+ ++ A AG
Sbjct: 77 AIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLG 136
Query: 279 V 279
V
Sbjct: 137 V 137
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 2e-09
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 165 KTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224
+ E + ++ G RPG + K +AV S + + +E +GME F
Sbjct: 95 RKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIE-AVGMEGF-- 151
Query: 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYT 283
LA +DV + KPDP +++ AA+RLG + C+V +S ++AA M CV +
Sbjct: 152 FSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGK 211
Query: 284 SSTAEQDFKD-AIAIYPDLSNVRLKDL 309
E D + DLS V LK+L
Sbjct: 212 HPVYELSAGDLVVRRLDDLSVVDLKNL 238
|
Length = 260 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 3e-09
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 297
KP+P + A +RLG+ ++C+++ DS + AA AG+ ++ T T +D + A
Sbjct: 4 KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERA-PG 62
Query: 298 YPDLSNVRLKDL 309
PD L DL
Sbjct: 63 RPDYVVDSLADL 74
|
Length = 74 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-08
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD--VKQKKP 239
PG RL+ A G +A+ + + K L + E F + + GDD VKQ KP
Sbjct: 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQR--HGELFSLMHHVVTGDDPEVKQGKP 138
Query: 240 DPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAGMACVI 280
P I++ AA+R + LV ED+ G++AA AGM+ V+
Sbjct: 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182
|
Length = 220 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 1e-07
Identities = 38/217 (17%), Positives = 65/217 (29%), Gaps = 65/217 (29%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRC--------DPSSQQSLNW--DPEFYDVL 118
A++FD DG +++ + R+A+ F F + + L W E + L
Sbjct: 1 AILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEALEEL 60
Query: 119 QNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
Q IG + DL+ K + I S
Sbjct: 61 QGHIGYDAEEAYIPG-----------------------AADLLPRLKEAGIKLGIISNGS 97
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKK 238
L G+ + + G D K
Sbjct: 98 LRA----------------------------QKLLLRKHGLGDYFE---LILGSDEIGSK 126
Query: 239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 275
P+P I++ A + LG+ + L V D++ ++ A AG
Sbjct: 127 PEPEIFLAALESLGVPP-EVLHVGDNLSDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 2e-07
Identities = 57/237 (24%), Positives = 95/237 (40%), Gaps = 53/237 (22%)
Query: 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
++FD DGV+++S + R+A+ A+ +G G
Sbjct: 1 VVFDLDGVLVDSFAVMREAFAIAYREV-------------------------VGDGPAPF 35
Query: 130 RWYFKEHG--WPSSTIFDNPPVTDDDQAKLIDLIQDWKT----ERYQQIIKSGTVEPRPG 183
Y + G +P D +++ L + + E Y+ +G VE PG
Sbjct: 36 EEYRRHLGRYFP-------------DIMRIMGLPLEMEEPFVRESYRL---AGEVEVFPG 79
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
V L+ E +A G A+ + + LE L G+ D + D+V + KP P I
Sbjct: 80 VPELLAELRADGVGTAIATGKSGPRARSLLEAL-GLLPL--FDHVIGSDEVPRPKPAPDI 136
Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300
A + L + +D ++V D+V L +A AG A V + E D + +A PD
Sbjct: 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATV---AALWGEGDAGELLAARPD 190
|
The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205 |
| >gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 4e-07
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 37/217 (17%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG--G 124
L+A++FD DG + +S+ LH A F ++LQ +I G
Sbjct: 22 LEAVLFDVDGTLCDSDPLHYYA-------------------------FREMLQ-EINFNG 55
Query: 125 GKPKMRWYFKEH--GWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
G P +F E+ G + I + DD + + D K ++++ ++P
Sbjct: 56 GVPITEEFFVENIAGKHNEDIALG--LFPDDLERGLKFTDD-KEALFRKLASE-QLKPLN 111
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
G+ +L + G K A + A + + L + +L+G+ F + G + + KP P
Sbjct: 112 GLYKLKKWIEDRGLKRAAVTNAPRENAELMI-SLLGLSDF--FQAVIIGSECEHAKPHPD 168
Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
Y+ A + L +S+ V EDSV G++A AGM V
Sbjct: 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205
|
Length = 248 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKP 239
PGV + E + +G ++ + T + E L + + D + ++ +KP
Sbjct: 95 VYPGVRDTLMELRESGYRLGI---ITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKP 151
Query: 240 DPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACV-ITYT-SSTAEQDFKDAIA 296
P I+ A KRLG+ ++ ++V D + ++ A GM V I SS E D
Sbjct: 152 HPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYP--- 208
Query: 297 IYPDLSNVRLKDLELLL 313
YPD + L LL
Sbjct: 209 -YPD---YEISSLRELL 221
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 275
F+ + VK+ KP+P Y+ A+ LG++ ++C+VVED+ G+ + AG
Sbjct: 128 FVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAG 175
|
Length = 218 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 144 FDNPPVTDD----DQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVA 199
F P + D D++K+ ++I ++ ++ V V + K G K+
Sbjct: 45 FIGPSLHDTFSKIDESKVEEMITTYREFNHEH--HDELVTEYETVYETLKTLKKQGYKLG 102
Query: 200 VCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL 259
+ + + +V + L+ L G++ F D + DDV+ KPDP + A + LG ++ L
Sbjct: 103 IVTTKMRDTVEMGLK-LTGLDEF--FDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159
Query: 260 VVEDSVIGLQAATRAG 275
+V D+ + A AG
Sbjct: 160 MVGDNHHDILAGKNAG 175
|
Length = 214 |
| >gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 5/142 (3%)
Query: 151 DDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI 210
D+A+ D++ ER + G PG +++G KVA+ + + +
Sbjct: 60 GADEAEAQAAFADFE-ERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAE 118
Query: 211 LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI-SEKDCLVVEDSVIGLQ 269
LE L G + +D + DV +P P + + A + G+ + V D+ L+
Sbjct: 119 RLLEKL-GWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLE 177
Query: 270 AATRAG--MACVITYTSSTAEQ 289
A AG + + AE+
Sbjct: 178 AGINAGAGAVVGVLTGAHDAEE 199
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220 |
| >gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
+ GD + ++KP P + AA+R+G++ DC+ V D + AA AGM V
Sbjct: 142 IGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSV 192
|
Length = 229 |
| >gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 213 LENLIGMERFEG-LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 271
LEN IG G +A +DV + KPDP +++ AA+ L + C+V +S ++AA
Sbjct: 246 LENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAA 305
Query: 272 TRAGMACV 279
A M CV
Sbjct: 306 HDARMKCV 313
|
Length = 381 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 5e-05
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITY 282
+ GD + QKKPDP+ + K G+ L V DS + AA AG+ CV ++Y
Sbjct: 148 IGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY 202
|
Length = 272 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 208 SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267
++ LE G E + G KP P+IY A ++LG+ + L+V D +
Sbjct: 172 AIAALLEQATGREPT------VIG------KPSPAIYEAALEKLGLDRSEVLMVGDRLDT 219
Query: 268 -LQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL 301
+ A AG+ ++ T ++ +D A + P
Sbjct: 220 DILGAKAAGLDTLLVLTGVSSAEDLDRA-EVKPTY 253
|
Length = 269 |
| >gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGDDVKQ 236
P PG + ++ +A G K+ + T+ ++ + +G D + DDV
Sbjct: 99 SPIPGAIEVIAYLRARGIKIGSTTGYTRE----MMDVVAPEAAAQGYRPDYNVTADDVPA 154
Query: 237 KKPDPSIYVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACVITYTSSTA 287
+P P + + A LG+ + + V D+V ++ AGM V SS
Sbjct: 155 GRPAPWMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGVILSSNE 206
|
This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253 |
| >gnl|CDD|233462 TIGR01548, HAD-SF-IA-hyp1, haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 6e-04
Identities = 44/225 (19%), Positives = 74/225 (32%), Gaps = 46/225 (20%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHF-NVRCDPSSQQSL----NWDPEF-------Y 115
QAL+ D DGV+ + +R+A D HF V + N + ++
Sbjct: 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVV 60
Query: 116 DVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS 175
D L + + + VT QA Y+ +
Sbjct: 61 DGLNSA-SSERVRDAP-------------TLEAVTAQFQALYQG------VGYYRDLATL 100
Query: 176 GTVEPRPGVL--RLMDEAKAAGKKVAVCSAATKSSVILCLE----NLIGMERFEGLDCFL 229
G +E + L+ E A K +AV + + L ++ + DC
Sbjct: 101 GLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDC-- 158
Query: 230 AGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 274
KP+P + AAK LG+ +V D+V + +A
Sbjct: 159 ------PPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197
|
This model represents a small and phylogenetically curious clade of sequences. Sequences are found from Halobacterium (an archaeon), Nostoc and Synechococcus (cyanobacteria) and Phytophthora (a stramenophile eukaryote). These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs. The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. Length = 197 |
| >gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKK 238
+ P + + E K AG KV V S +S V E L G+ F+ + KK
Sbjct: 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-------GVP-FIY----RAKK 93
Query: 239 PDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACV 279
P + A K + + ++ ++V D + + RAGM +
Sbjct: 94 PFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTI 135
|
Length = 175 |
| >gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGDDVKQ 236
P PGVL ++ +A G K+ + T+ ++ ++ + +G D + DDV
Sbjct: 101 TPIPGVLEVIAALRARGIKIGSTTGYTRE----MMDVVVPLAAAQGYRPDHVVTTDDVPA 156
Query: 237 KKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGM 276
+P P + + A LG+ + C+ V+D+V G++ AGM
Sbjct: 157 GRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197
|
Length = 267 |
| >gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGLDCFLAGDDVK 235
+ P P V + K G ++A+ S + + + +++ G++ F+ + L+ D V+
Sbjct: 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA-GLDDPFDAV---LSADAVR 145
Query: 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 277
KP P +Y A + LG+ + L V + L A + G
Sbjct: 146 AYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187
|
Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198 |
| >gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.003
Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 38/146 (26%)
Query: 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS 202
D P V D+D+ L + D L E K AG KV +
Sbjct: 12 TDDVPYVDDEDERILYPEVPDA--------------------LA---ELKEAGYKVVI-- 46
Query: 203 AATKSSVILCLENLIG-MERF-EGLDCFLAGDDVKQ-----KKPDPSIYVTAAKRL-GIS 254
T S I + G + R E L + D+ +KP P +++ A KR I
Sbjct: 47 -VTNQSGIGRGKFSSGRVARRLEELGVPI---DILYACPHCRKPKPGMFLEALKRFNEID 102
Query: 255 EKDCLVVEDSVI-GLQAATRAGMACV 279
++ + V D + LQAA RAG+A +
Sbjct: 103 PEESVYVGDQDLTDLQAAKRAGLAFI 128
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 100.0 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 100.0 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 100.0 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 100.0 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 100.0 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.98 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.98 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.98 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.97 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.97 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.97 | |
| PLN02940 | 382 | riboflavin kinase | 99.97 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.97 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.97 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.97 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.97 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.97 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.96 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.96 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.96 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.96 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.96 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.96 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.96 | |
| PLN02811 | 220 | hydrolase | 99.95 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.95 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.95 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.94 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.94 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.94 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.93 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.93 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.93 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.93 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.92 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.91 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.9 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.89 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.88 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.88 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.88 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.88 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.88 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.87 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.87 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.85 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.84 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.84 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.83 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.83 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.82 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.8 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.79 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.79 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.78 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.77 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.75 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.75 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.75 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.74 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.73 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.72 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.71 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.71 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.7 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.7 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.7 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.68 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.68 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.67 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.67 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.67 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.66 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.65 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.64 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.64 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.63 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.6 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.58 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.57 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.54 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.54 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.53 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.52 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.52 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.51 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.48 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.48 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.46 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.46 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.46 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.44 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.44 | |
| PLN02887 | 580 | hydrolase family protein | 99.4 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.4 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.4 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.38 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.37 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.37 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.37 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.35 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.33 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.32 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.29 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.28 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.23 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.2 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.2 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.2 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.19 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.18 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.17 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.15 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.14 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.14 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.14 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.13 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.1 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.02 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.02 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.0 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.99 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.98 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.93 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.92 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.9 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.9 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.88 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.84 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.81 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.78 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.74 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.72 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.7 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.7 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.7 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.69 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.66 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.6 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.6 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.53 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.52 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.52 | |
| PLN02423 | 245 | phosphomannomutase | 98.5 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.48 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.46 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.43 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.43 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.42 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.39 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.32 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.17 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.16 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.16 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.12 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.07 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.07 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.02 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.94 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.89 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.88 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.84 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.82 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.82 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.78 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.76 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.75 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.75 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.73 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.72 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.69 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.69 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.68 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.6 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.54 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.42 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.38 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.36 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.32 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.32 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.27 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 97.21 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 97.17 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.16 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 97.1 | |
| PLN03017 | 366 | trehalose-phosphatase | 97.02 | |
| PLN02151 | 354 | trehalose-phosphatase | 96.92 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.89 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.85 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.78 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.74 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 96.74 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.71 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.7 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.67 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 96.4 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 96.01 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 95.92 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 95.9 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.88 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 95.83 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 95.75 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 95.59 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.58 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 95.21 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 94.86 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 94.47 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 94.26 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 94.16 | |
| CHL00162 | 267 | thiG thiamin biosynthesis protein G; Validated | 94.06 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 93.85 | |
| PF05690 | 247 | ThiG: Thiazole biosynthesis protein ThiG; InterPro | 93.81 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 93.77 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 93.48 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 93.4 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 93.21 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.21 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.14 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 92.56 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 91.99 | |
| COG2022 | 262 | ThiG Uncharacterized enzyme of thiazole biosynthes | 91.63 | |
| PRK13762 | 322 | tRNA-modifying enzyme; Provisional | 90.96 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 90.86 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 90.81 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 90.01 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 89.77 | |
| PRK00208 | 250 | thiG thiazole synthase; Reviewed | 89.04 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 88.9 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 88.34 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 88.06 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 87.82 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 87.54 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 86.7 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 86.43 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 85.96 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 85.58 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 85.48 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 85.17 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 84.25 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 84.2 | |
| PRK00994 | 277 | F420-dependent methylenetetrahydromethanopterin de | 84.06 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 83.63 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 83.1 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 82.44 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 82.33 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 82.16 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 81.98 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 81.41 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 81.25 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 80.73 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 80.62 | |
| TIGR03470 | 318 | HpnH hopanoid biosynthesis associated radical SAM | 80.34 |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=250.88 Aligned_cols=243 Identities=53% Similarity=0.917 Sum_probs=185.9
Q ss_pred CCCccEEEEecCCccccch-HHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcc
Q 020871 64 SQSLQALIFDCDGVIIESE-HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (320)
...+++||||+||||+|+. ..+..+|.++++++|++.. .+..+.+..+.. +|.+...+...+...+++...
T Consensus 37 ~~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~-------~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 108 (286)
T PLN02779 37 SALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPV-------EWDVELYDELLN-IGGGKERMTWYFNENGWPTST 108 (286)
T ss_pred ccCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCC-------CCCHHHHHHHHc-cCCChHHHHHHHHHcCCCccc
Confidence 3468999999999999999 9999999999999988321 122333333333 677766666666666665332
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
+ ...+...+..++..+.+.+.+.+.|...+....+.++||+.++|+.|++.|++++|+||+....+...++...+...+
T Consensus 109 ~-~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~ 187 (286)
T PLN02779 109 I-EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERA 187 (286)
T ss_pred c-ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccccc
Confidence 2 111222333344555566666667776654444689999999999999999999999999999888888775222222
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccc
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~ 302 (320)
..|+.+ ++++++..||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|++.++....+.+..++.++.++.
T Consensus 188 ~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~ 266 (286)
T PLN02779 188 QGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLG 266 (286)
T ss_pred CceEEE-eccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChh
Confidence 224544 7888889999999999999999999999999999999999999999999999888776667778899999999
Q ss_pred ccChhHHHHHHHHh
Q 020871 303 NVRLKDLELLLQNV 316 (320)
Q Consensus 303 ~~~~~~l~~~l~~~ 316 (320)
++.+.++..++-..
T Consensus 267 ~l~~~~~~~~~~~~ 280 (286)
T PLN02779 267 DVPLEDFDLLFCES 280 (286)
T ss_pred hcchhhhHHHHHHH
Confidence 99999998776543
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=230.21 Aligned_cols=213 Identities=24% Similarity=0.373 Sum_probs=161.3
Q ss_pred CCccEEEEecCCccccch-HHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESE-HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (320)
..+|+||||+||||+|+. ..+..+|..+++++|+..+. .+.++...|.+.......+- ++.
T Consensus 22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~------------~e~~~~~~G~~~~~~~~~l~--~~~---- 83 (260)
T PLN03243 22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPP------------AFLLKRAEGMKNEQAISEVL--CWS---- 83 (260)
T ss_pred CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCH------------HHHHHHhcCCCHHHHHHHHh--ccC----
Confidence 479999999999999996 56778999999999986543 12334456666544333221 111
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
.+.. ..+.+...+...+... ......++||+.++|+.|+++|++++|+||+....+...++++ |+..+
T Consensus 84 -----~~~~----~~~~l~~~~~~~~~~~-~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~~- 151 (260)
T PLN03243 84 -----RDFL----QMKRLAIRKEDLYEYM-QGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV-GMEGF- 151 (260)
T ss_pred -----CCHH----HHHHHHHHHHHHHHHH-HccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc-CCHhh-
Confidence 0011 1223333344444322 2345689999999999999999999999999999899999997 99999
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.+++++++..+||+|++|..+++++|++|++|+||||+..|+++|+++|+.+|++. +......+..+++++.++.+
T Consensus 152 -Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l~~ad~vi~~~~e 229 (260)
T PLN03243 152 -FSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYELSAGDLVVRRLDD 229 (260)
T ss_pred -CcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhhccCCEEeCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999997 44444455556666666655
Q ss_pred cChhHH
Q 020871 304 VRLKDL 309 (320)
Q Consensus 304 ~~~~~l 309 (320)
+....+
T Consensus 230 l~~~~~ 235 (260)
T PLN03243 230 LSVVDL 235 (260)
T ss_pred HHHHHH
Confidence 544333
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=237.28 Aligned_cols=219 Identities=22% Similarity=0.291 Sum_probs=171.7
Q ss_pred CCCccEEEEecCCccccchH-HHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcc
Q 020871 64 SQSLQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (320)
...+++||||+||||+|+.. .+..+|.++++++|.+... .+.++..+|.+.......+.....
T Consensus 128 ~~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~------------~e~~~~~~G~~~~~~l~~ll~~~~---- 191 (381)
T PLN02575 128 GCGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPP------------AFILRRVEGMKNEQAISEVLCWSR---- 191 (381)
T ss_pred cCCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCH------------HHHHHHhcCCCHHHHHHHHhhccC----
Confidence 35899999999999999986 6668999999999986543 123455667665544332211111
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
+.. ..+.+.+.+.+.|.+... ....++||+.++|+.|++.|++++|+||+....+...++.+ |+..|
T Consensus 192 -------~~~----~~e~l~~~~~~~y~~~~~-~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l-gL~~y 258 (381)
T PLN02575 192 -------DPA----ELRRMATRKEEIYQALQG-GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI-GIRGF 258 (381)
T ss_pred -------CHH----HHHHHHHHHHHHHHHHhc-cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCHHH
Confidence 111 123344445555655432 34579999999999999999999999999999999999997 99999
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccc
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~ 302 (320)
|+.+++++++..+||+|++|..+++++|+.|++|+||||+..|+++|+++|+.+|++.++. ....+..++.++.++.
T Consensus 259 --Fd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~-~~~~l~~Ad~iI~s~~ 335 (381)
T PLN02575 259 --FSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PIYELGAADLVVRRLD 335 (381)
T ss_pred --ceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCC-ChhHhcCCCEEECCHH
Confidence 9999999999999999999999999999999999999999999999999999999998754 3344556778888888
Q ss_pred ccChhHHHHHHH
Q 020871 303 NVRLKDLELLLQ 314 (320)
Q Consensus 303 ~~~~~~l~~~l~ 314 (320)
++.+..|..+..
T Consensus 336 EL~~~~l~~l~~ 347 (381)
T PLN02575 336 ELSIVDLKNLAD 347 (381)
T ss_pred HHHHHHHhhhhh
Confidence 887777766554
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=228.56 Aligned_cols=213 Identities=23% Similarity=0.356 Sum_probs=158.9
Q ss_pred CCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcc
Q 020871 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (320)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (320)
...++++|+||+||||+|+...+..+|+++++++|..... ....+. ..+...|.+.......+- ..
T Consensus 18 ~~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~------~~~~~~--~~~~~~G~~~~~~~~~~~--~~---- 83 (248)
T PLN02770 18 GLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGV------PITEEF--FVENIAGKHNEDIALGLF--PD---- 83 (248)
T ss_pred ccCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCC------CCCHHH--HHHHcCCCCHHHHHHHHc--Cc----
Confidence 3457899999999999999999999999999998753110 001111 122334544433222110 00
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
..... ..+...+...|..... ....++||+.++|+.|+++|++++|+||+....+...++++ |+..+
T Consensus 84 -------~~~~~----~~~~~~~~~~y~~~~~-~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~~ 150 (248)
T PLN02770 84 -------DLERG----LKFTDDKEALFRKLAS-EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL-GLSDF 150 (248)
T ss_pred -------chhhH----HHHHHHHHHHHHHHHH-hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CChhh
Confidence 00111 1122233444444332 34689999999999999999999999999999999999997 99999
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc--cccceeccc
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPD 300 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l--~~~~~~~~~ 300 (320)
|+.+++++++..+||+|++|..+++++|++|++|+||||+..|+++|+++|+.+|++.++... +.+ ..+++++.+
T Consensus 151 --Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~-~~l~~~~a~~vi~~ 227 (248)
T PLN02770 151 --FQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPE-SLLMEAKPTFLIKD 227 (248)
T ss_pred --CcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCH-HHHhhcCCCEEecc
Confidence 999999999999999999999999999999999999999999999999999999999887533 333 257778888
Q ss_pred ccccC
Q 020871 301 LSNVR 305 (320)
Q Consensus 301 ~~~~~ 305 (320)
+.+++
T Consensus 228 ~~e~~ 232 (248)
T PLN02770 228 YEDPK 232 (248)
T ss_pred chhhH
Confidence 77744
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=222.79 Aligned_cols=212 Identities=19% Similarity=0.281 Sum_probs=159.6
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
|++++|+||+||||+|+...+..+|..++++++..... .+.+...+|.+... .+...+
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~------------~~~~~~~~G~~~~~---~~~~~~------- 58 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYK------------REDVLPFIGPSLHD---TFSKID------- 58 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCC------------HHHHHHHhCcCHHH---HHHhcC-------
Confidence 46899999999999999999999999999998764221 13344555554332 222211
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
.... +.+...+.+.+.... .....++||+.++|+.|+++|++++|+||+....+...++.+ |+..+
T Consensus 59 ------~~~~----~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~-gl~~~-- 124 (214)
T PRK13288 59 ------ESKV----EEMITTYREFNHEHH-DELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT-GLDEF-- 124 (214)
T ss_pred ------HHHH----HHHHHHHHHHHHHhh-hhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhc--
Confidence 1111 222223333333221 133579999999999999999999999999999999999987 99999
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 304 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 304 (320)
|+.+++++++...||+|++|..++++++++|++|+||||+.+|+++|+++|+.++++.++......+... .+++..-
T Consensus 125 f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~---~~~~~i~ 201 (214)
T PRK13288 125 FDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQY---KPDFMLD 201 (214)
T ss_pred eeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhc---CcCEEEC
Confidence 9999999999999999999999999999999999999999999999999999999998886554444221 1333333
Q ss_pred ChhHHHHHHHH
Q 020871 305 RLKDLELLLQN 315 (320)
Q Consensus 305 ~~~~l~~~l~~ 315 (320)
++.++.+++.+
T Consensus 202 ~~~~l~~~i~~ 212 (214)
T PRK13288 202 KMSDLLAIVGD 212 (214)
T ss_pred CHHHHHHHHhh
Confidence 56677776654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=222.32 Aligned_cols=211 Identities=20% Similarity=0.280 Sum_probs=159.8
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHH-HhcCChhhHH-HHHHhcCCCCcccc
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-QIGGGKPKMR-WYFKEHGWPSSTIF 144 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~g~~~~~~~ 144 (320)
+|+|+||+||||+|+.+.+..+|+++++++|.+.+. +.+.. ..|.+...+. ..+...|.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~----- 62 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTP-------------EEVQSAWMGQSKIEAIRALLALDGAD----- 62 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCH-------------HHHHHhhcCCCHHHHHHHHHhccCCC-----
Confidence 589999999999999999999999999999886533 12222 4455544433 333333321
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc--cc
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME--RF 222 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~--~~ 222 (320)
.. ..+.+...+.+.+...+......++||+.++|+.|++.|++++++||+....+...++.+ |+. .+
T Consensus 63 ------~~----~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~-~l~~~~~ 131 (220)
T TIGR03351 63 ------EA----EAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL-GWTVGDD 131 (220)
T ss_pred ------HH----HHHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh-hhhhhcc
Confidence 11 123333334444444433344689999999999999999999999999999999999987 888 88
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCCEEEEecCHhhHHHHHHcCCeE-EEEeCCCCchhhcc--ccceec
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDFK--DAIAIY 298 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~-~~~~v~VGD~~~Dv~~a~~aG~~~-v~v~~~~~~~~~l~--~~~~~~ 298 (320)
|+.++++++....||+|++|..+++++|+. |++|+||||+.+|+++|+++|+.+ +++.++....+.+. .+++++
T Consensus 132 --f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i 209 (220)
T TIGR03351 132 --VDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL 209 (220)
T ss_pred --CCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee
Confidence 899999999999999999999999999997 799999999999999999999999 89988766555443 233343
Q ss_pred ccccccChhHHHHHH
Q 020871 299 PDLSNVRLKDLELLL 313 (320)
Q Consensus 299 ~~~~~~~~~~l~~~l 313 (320)
. ++.+|..++
T Consensus 210 ~-----~~~~l~~~~ 219 (220)
T TIGR03351 210 D-----SVADLPALL 219 (220)
T ss_pred c-----CHHHHHHhh
Confidence 3 345555443
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-31 Score=219.74 Aligned_cols=216 Identities=24% Similarity=0.386 Sum_probs=167.0
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHH-HhcCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~ 143 (320)
+++++|+||+||||+|+...+..+++.+++++|.+... .+.++..+|.+.......+ .....
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ig~~~~~~~~~~~~~~~~----- 64 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLD------------EEEIRQLIGLGLDELIERLLGEADE----- 64 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhcCCHHHHHHHHhccccc-----
Confidence 57999999999999999999999999999999987433 3566667777665544322 11111
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
.......+.+.+.+.+.+.+.. ...++||+.++|..|++.|++++|+||.....++..++++ |+..+
T Consensus 65 --------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~-gl~~~- 131 (220)
T COG0546 65 --------EAAAELVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL-GLADY- 131 (220)
T ss_pred --------hhHHHHHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh-CCccc-
Confidence 1111334444444444444432 2479999999999999999999999999999999999997 99999
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.++++++....||+|..+..+++++|++|++++||||+.+|+++|++||+.+|+|.+|+...+.+.. ..+++..
T Consensus 132 -F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~---~~~d~vi 207 (220)
T COG0546 132 -FDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQ---AGADVVI 207 (220)
T ss_pred -cceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhh---cCCCEEE
Confidence 999999888999999999999999999999889999999999999999999999999998753333321 2244444
Q ss_pred cChhHHHHHHH
Q 020871 304 VRLKDLELLLQ 314 (320)
Q Consensus 304 ~~~~~l~~~l~ 314 (320)
.++.+|..+++
T Consensus 208 ~~~~el~~~l~ 218 (220)
T COG0546 208 DSLAELLALLA 218 (220)
T ss_pred CCHHHHHHHHh
Confidence 45666666654
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=222.27 Aligned_cols=214 Identities=21% Similarity=0.228 Sum_probs=157.3
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
.++|+|+||+||||+|+...+..+|+.++.++|.+... .+.+...+|.+........ ..
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~---~~------ 68 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPIT------------LAQLRPVVSKGARAMLAVA---FP------ 68 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhhhHHHHHHHHH---hc------
Confidence 36899999999999999999999999999999975322 1344445554443322211 00
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
.......+++.+ .+.+.|...+. ....++||+.++|+.|++.|++++++||+........++.+ ++..+
T Consensus 69 ---~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~-~l~~~-- 137 (229)
T PRK13226 69 ---ELDAAARDALIP----EFLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL-GWEQR-- 137 (229)
T ss_pred ---cCChHHHHHHHH----HHHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-Cchhc--
Confidence 011122222333 33344443322 23579999999999999999999999999988888888886 99888
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCch-hhccccceecccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE-QDFKDAIAIYPDLSN 303 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~-~~l~~~~~~~~~~~~ 303 (320)
|+.++++++++..||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|++.++.... +.+.. ..+++..
T Consensus 138 f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~---~~~~~~i 214 (229)
T PRK13226 138 CAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLA---WQADVLV 214 (229)
T ss_pred ccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhh---cCCCeee
Confidence 8999999888899999999999999999999999999999999999999999999998876422 11211 1244444
Q ss_pred cChhHHHHHH
Q 020871 304 VRLKDLELLL 313 (320)
Q Consensus 304 ~~~~~l~~~l 313 (320)
.++.+|.+.+
T Consensus 215 ~~~~el~~~~ 224 (229)
T PRK13226 215 EQPQLLWNPA 224 (229)
T ss_pred CCHHHHHHHh
Confidence 4566665554
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-31 Score=220.36 Aligned_cols=208 Identities=23% Similarity=0.392 Sum_probs=156.6
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHH-HHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 144 (320)
++++|+||+||||+|+...+..++.+++.++|.+... .+.+...+|........ +....++..
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~---- 69 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISR------------REELPDTLGLRIDQVVDLWYARQPWNG---- 69 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCH------------HHHHHHhhCCCHHHHHHHHHHhcCCCC----
Confidence 6999999999999999999999999999999876432 12344555554433332 222223211
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
....+....+.+. +...+. ....++||+.++|+.|+++|++++++||+........++.+ ++..+
T Consensus 70 -------~~~~~~~~~~~~~----~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~-- 134 (222)
T PRK10826 70 -------PSRQEVVQRIIAR----VISLIE-ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF-DLRDY-- 134 (222)
T ss_pred -------CCHHHHHHHHHHH----HHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC-cchhc--
Confidence 1112222222222 222222 34689999999999999999999999999999899899886 99999
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhh-ccccceecccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD-FKDAIAIYPDLSN 303 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~-l~~~~~~~~~~~~ 303 (320)
|+.++++++++.+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|+++++....+. ...++.++.++.+
T Consensus 135 f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 135 FDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred ccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHH
Confidence 999999999999999999999999999999999999999999999999999999999887654322 2334555555444
Q ss_pred c
Q 020871 304 V 304 (320)
Q Consensus 304 ~ 304 (320)
+
T Consensus 215 l 215 (222)
T PRK10826 215 L 215 (222)
T ss_pred H
Confidence 3
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-31 Score=218.20 Aligned_cols=217 Identities=30% Similarity=0.481 Sum_probs=166.0
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHh-cCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 144 (320)
++++|||||||||+|++..+.++|.+++.++|+..+. +......|.........+.+ .+...
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~---- 63 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISD-------------EEIRELHGGGIARIIDLLRKLAAGED---- 63 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCH-------------HHHHHHHCCChHHHHHHHHHHhcCCc----
Confidence 4799999999999999999999999999999987654 33444455554444433333 21110
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
... . .....+........ .....+.||+.++|..|+++|++++++|++.+......++.+ |+.++
T Consensus 64 ------~~~-~---~~~~~~~~~~~~~~--~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~-gl~~~-- 128 (221)
T COG0637 64 ------PAD-L---AELERLLYEAEALE--LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL-GLLDY-- 128 (221)
T ss_pred ------ccC-H---HHHHHHHHHHHHhh--hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc-cChhh--
Confidence 000 0 01111111112121 345789999999999999999999999999999899999997 99999
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 304 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 304 (320)
|+.++.++++..+||+|+.|..++++||++|++||+|+|+.+++++|++|||.+|++..+... ...........+....
T Consensus 129 f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~-~~~~~~~~~~~~~~~~ 207 (221)
T COG0637 129 FDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDR-PHLDPLDAHGADTVLL 207 (221)
T ss_pred cchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCc-cccchhhhhhcchhhc
Confidence 999999999999999999999999999999999999999999999999999999999884332 2344556666777777
Q ss_pred ChhHHHHHHHH
Q 020871 305 RLKDLELLLQN 315 (320)
Q Consensus 305 ~~~~l~~~l~~ 315 (320)
++.++...+..
T Consensus 208 ~~~~l~~~~~~ 218 (221)
T COG0637 208 DLAELPALLEA 218 (221)
T ss_pred cHHHHHHHHHh
Confidence 77777766653
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-30 Score=220.84 Aligned_cols=190 Identities=24% Similarity=0.342 Sum_probs=143.1
Q ss_pred ccEEEEecCCccccchH-HHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-----------HHHHH
Q 020871 67 LQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-----------RWYFK 134 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 134 (320)
+++|+||+||||+|+.. .+..+|.+++.++|.+.+. +.+...+|.+.... ..+..
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 68 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITL-------------EEARGPMGLGKWDHIRALLKMPAVAERWRA 68 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccH-------------HHHHHhcCccHHHHHHHHhcCHHHHHHHHH
Confidence 78999999999999864 3578999999998875432 23333444443221 11222
Q ss_pred hcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHH
Q 020871 135 EHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (320)
Q Consensus 135 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~ 214 (320)
.+|.. .+.... +.+...+...+...+ .....++||+.++|+.|+++|++++|+||+....+...++
T Consensus 69 ~~~~~---------~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~ 134 (253)
T TIGR01422 69 KFGRL---------PTEADI----EAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAP 134 (253)
T ss_pred HhCCC---------CCHHHH----HHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHH
Confidence 22321 111122 223333333333322 2346899999999999999999999999999999999999
Q ss_pred HhhCCccccCc-ceEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 215 NLIGMERFEGL-DCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 215 ~~~~l~~~~~f-d~v~~~~~~~~~KP~~~~~~~~~~~l~~~-~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
++ |+..+ | +.+++++++...||+|++|..+++++|+. |++|+||||+.+|+++|+++|+.+|+|.++..
T Consensus 135 ~~-gl~~~--f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 135 EA-ALQGY--RPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred HH-HhcCC--CCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence 87 88877 5 89999999999999999999999999995 99999999999999999999999999988765
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=223.36 Aligned_cols=193 Identities=24% Similarity=0.346 Sum_probs=142.4
Q ss_pred CCccEEEEecCCccccchHH-HHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HH----------H
Q 020871 65 QSLQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RW----------Y 132 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~ 132 (320)
+++|+|+||+||||+|+... +..+|++++.++|.+.+. +.+...+|.+.... .. +
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 68 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITL-------------EEARGPMGLGKWDHIRALLKMPRVAARW 68 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHhcHHHHHHH
Confidence 46899999999999998643 468999999999875432 23334444433221 11 1
Q ss_pred HHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHH
Q 020871 133 FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (320)
Q Consensus 133 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~ 212 (320)
...+|.. ....... .+...+...+...+ .....++||+.++|+.|+++|++++|+||+....+...
T Consensus 69 ~~~~g~~---------~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~ 134 (267)
T PRK13478 69 QAVFGRL---------PTEADVD----ALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVV 134 (267)
T ss_pred HHHhCCC---------CCHHHHH----HHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHH
Confidence 1122211 1111222 22223333333332 23458999999999999999999999999999988888
Q ss_pred HHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 213 LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 213 l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~-~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
++.+ ++..++ |+.+++++++...||+|++|..+++++|+. +++|+||||+.+|+++|+++|+.+|+|.++..
T Consensus 135 l~~~-~l~~~~-~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 135 VPLA-AAQGYR-PDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHH-hhcCCC-ceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 8886 776651 488999999999999999999999999996 69999999999999999999999999988765
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=216.70 Aligned_cols=206 Identities=19% Similarity=0.343 Sum_probs=149.9
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
|++|+|+||+||||+|+...+..+|+++++++|++.. +......|.+.......+.. +.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~--------------~~~~~~~g~~~~~~~~~~~~-~~------ 59 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPD--------------EVLNFIHGKQAITSLRHFMA-GA------ 59 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHH--------------HHHHHHcCCCHHHHHHHHhc-cC------
Confidence 4689999999999999999999999999999997421 11222234443332221110 11
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
.. +++.+.+... ..+.... .....++||+.++|+.|+++|++++++||+........++.. ++. +
T Consensus 60 -----~~---~~~~~~~~~~--~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~-~l~-~-- 124 (218)
T PRK11587 60 -----SE---AEIQAEFTRL--EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA-GLP-A-- 124 (218)
T ss_pred -----Cc---HHHHHHHHHH--HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc-CCC-C--
Confidence 11 1111222111 1111111 234689999999999999999999999999887776667665 774 4
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 304 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 304 (320)
|+.+++++++...||+|++|..+++++|++|++|+||||+..|+++|+++|+.+|++.++... .....+++++.++.++
T Consensus 125 ~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~~~~~el 203 (218)
T PRK11587 125 PEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADT-PRLDEVDLVLHSLEQL 203 (218)
T ss_pred ccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCch-hhhccCCEEecchhhe
Confidence 678888888888999999999999999999999999999999999999999999999876533 3344567777777766
Q ss_pred Chh
Q 020871 305 RLK 307 (320)
Q Consensus 305 ~~~ 307 (320)
.+.
T Consensus 204 ~~~ 206 (218)
T PRK11587 204 TVT 206 (218)
T ss_pred eEE
Confidence 543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=214.04 Aligned_cols=193 Identities=22% Similarity=0.355 Sum_probs=149.5
Q ss_pred EEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCccccCCCC
Q 020871 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDNPP 148 (320)
Q Consensus 70 viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 148 (320)
||||+||||+|+...+..+++.+++++|.+... .+.+...+|.+.... ..++...+..
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~--------- 59 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPAT------------LARVIGFIGNGVPVLMERVLAWAGQE--------- 59 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhcccHHHHHHHHhhccccc---------
Confidence 699999999999999999999999999885322 123444555554333 2233333321
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceE
Q 020871 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (320)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v 228 (320)
.+.. ..+.+.+.+.+.|...+. ....++||+.++|+.|+++|++++|+||+....+...++++ |+..+ |+.+
T Consensus 60 ~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~~ 131 (213)
T TIGR01449 60 PDAQ----RVAELRKLFDRHYEEVAG-ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKY--FSVL 131 (213)
T ss_pred cChH----HHHHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CcHhh--CcEE
Confidence 1111 123333444445554432 24579999999999999999999999999999999999997 99988 9999
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 229 ~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
++++++...||+|++|..+++++|++|++|+||||+.+|+++|+++|+.++++.++....+.+
T Consensus 132 ~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l 194 (213)
T TIGR01449 132 IGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAI 194 (213)
T ss_pred EecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcch
Confidence 999999999999999999999999999999999999999999999999999998876544333
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=229.33 Aligned_cols=210 Identities=21% Similarity=0.377 Sum_probs=163.1
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~ 144 (320)
.+++|+||+||||+|+...+..+|..+++++|..... +.+...+|.+... ...++.+++++.
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~---- 72 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDG-------------REAQKIVGKTPLEAAATVVEDYGLPC---- 72 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCCC----
Confidence 5999999999999999999999999999999875432 3345566655443 344555555431
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
..+++.+.+.+. +.... ....++||+.++|+.|++.|++++|+||+....+...++...++..+
T Consensus 73 --------~~~~~~~~~~~~----~~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~-- 136 (382)
T PLN02940 73 --------STDEFNSEITPL----LSEQW--CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES-- 136 (382)
T ss_pred --------CHHHHHHHHHHH----HHHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--
Confidence 112222333222 22222 23579999999999999999999999999998888888733489888
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 304 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 304 (320)
||.+++++++...||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++.++.........++.++.++.++
T Consensus 137 Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 137 FSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 99999999999999999999999999999999999999999999999999999999988754443445667777777766
Q ss_pred ChhH
Q 020871 305 RLKD 308 (320)
Q Consensus 305 ~~~~ 308 (320)
...+
T Consensus 217 ~~~~ 220 (382)
T PLN02940 217 QPEK 220 (382)
T ss_pred CHHH
Confidence 5444
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=216.95 Aligned_cols=213 Identities=18% Similarity=0.222 Sum_probs=159.2
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccc
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (320)
..++++|+||+||||+|+...+..+++++++++|.+... . +.+....|... ..+++.++++
T Consensus 59 ~~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~---------~---~~~~~~~g~~~---~~i~~~~~~~---- 119 (273)
T PRK13225 59 PQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPID---------E---RDYAQLRQWSS---RTIVRRAGLS---- 119 (273)
T ss_pred hhhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCC---------H---HHHHHHhCccH---HHHHHHcCCC----
Confidence 346999999999999999999999999999999986433 1 22333444332 2333333321
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
....+++. ..+.+.+.... ...+++||+.++|+.|+++|++++|+||+....+...++.+ |+..+
T Consensus 120 -------~~~~~~~~----~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~-gl~~~- 184 (273)
T PRK13225 120 -------PWQQARLL----QRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ-GLRSL- 184 (273)
T ss_pred -------HHHHHHHH----HHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhh-
Confidence 12222222 22333333322 34678999999999999999999999999999999999997 99988
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.+++++++. ++++.|..++++++++|++|+||||+.+|+++|+++|+.+|++.++....+.+.. ..+++..
T Consensus 185 -F~~vi~~~~~~---~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~---~~ad~~i 257 (273)
T PRK13225 185 -FSVVQAGTPIL---SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVA---ACPDWLL 257 (273)
T ss_pred -eEEEEecCCCC---CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHH---CCCCEEE
Confidence 89888776653 4568999999999999999999999999999999999999999998776554532 1244555
Q ss_pred cChhHHHHHHHHhh
Q 020871 304 VRLKDLELLLQNVV 317 (320)
Q Consensus 304 ~~~~~l~~~l~~~~ 317 (320)
.++.+|.+++.+++
T Consensus 258 ~~~~eL~~~~~~~~ 271 (273)
T PRK13225 258 ETPSDLLQAVTQLM 271 (273)
T ss_pred CCHHHHHHHHHHHh
Confidence 56788888777665
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=216.70 Aligned_cols=218 Identities=21% Similarity=0.288 Sum_probs=160.3
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
..+|+|+||+||||+|+...+..++..++.++|.+... .+.+....|.+...+...+-... +
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~l~~~------~ 72 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAG------------LEAVRHWVGNGAPVLVRRALAGS------I 72 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhChhHHHHHHHHhccc------c
Confidence 36899999999999999999999999999999986432 12344455555433322111000 0
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
.....+.. ..+.+.+.+.+.|... .....++||+.++|+.|++.|++++++||+....+...++.+ ++..+
T Consensus 73 ~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~-~i~~~-- 143 (272)
T PRK13223 73 DHDGVDDE----LAEQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM-KIGRY-- 143 (272)
T ss_pred cccCCCHH----HHHHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc-CcHhh--
Confidence 00111111 2233334444444432 123568999999999999999999999999998888888886 99988
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc--ccceeccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK--DAIAIYPDLS 302 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~--~~~~~~~~~~ 302 (320)
|+.++++++++..||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+++|.++......+. .+++++.
T Consensus 144 f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--- 220 (272)
T PRK13223 144 FRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--- 220 (272)
T ss_pred CeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC---
Confidence 89999999999999999999999999999999999999999999999999999999988766544433 3444443
Q ss_pred ccChhHHHHHHH
Q 020871 303 NVRLKDLELLLQ 314 (320)
Q Consensus 303 ~~~~~~l~~~l~ 314 (320)
++.+|..++.
T Consensus 221 --~l~el~~~~~ 230 (272)
T PRK13223 221 --DLRALLPGCA 230 (272)
T ss_pred --CHHHHHHHHh
Confidence 4555555443
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=207.87 Aligned_cols=202 Identities=27% Similarity=0.423 Sum_probs=151.9
Q ss_pred EEEecCCccccchHHHHHHHHHHHHh-cccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccccCCCC
Q 020871 70 LIFDCDGVIIESEHLHRQAYNDAFSH-FNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPP 148 (320)
Q Consensus 70 viFD~DGTL~d~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 148 (320)
|+||+||||+|+...+.+++++++.+ +|.+... .+.+....|.... ..++..|++
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~---~~~~~~~~~--------- 56 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAP------------FEEYRRHLGRYFP---DIMRIMGLP--------- 56 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCC------------HHHHHHHhCccHH---HHHHHcCCC---------
Confidence 68999999999999999999999987 4654222 2344555554433 333333322
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceE
Q 020871 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (320)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v 228 (320)
.. .. +. .....+. . .....++||+.++|+.|+++|++++++||+....+...++++ |+..+ |+.+
T Consensus 57 --~~-~~---~~---~~~~~~~-~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-~l~~~--f~~i 121 (205)
T TIGR01454 57 --LE-ME---EP---FVRESYR-L--AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL-GLLPL--FDHV 121 (205)
T ss_pred --HH-HH---HH---HHHHHHH-h--hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc-CChhh--eeeE
Confidence 00 00 11 1111221 1 234689999999999999999999999999999898888886 99988 9999
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhH
Q 020871 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 308 (320)
Q Consensus 229 ~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~ 308 (320)
+++++...+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.++++.++....+.+.. ..+++...++.+
T Consensus 122 ~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~---~~~~~~~~~~~~ 198 (205)
T TIGR01454 122 IGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLA---ARPDFLLRKPQS 198 (205)
T ss_pred EecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhh---cCCCeeeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999988766555532 113333335566
Q ss_pred HHHHH
Q 020871 309 LELLL 313 (320)
Q Consensus 309 l~~~l 313 (320)
|.+++
T Consensus 199 l~~~~ 203 (205)
T TIGR01454 199 LLALC 203 (205)
T ss_pred HHHHh
Confidence 66554
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=205.96 Aligned_cols=219 Identities=24% Similarity=0.330 Sum_probs=162.7
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHH-HHHhcCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 143 (320)
+++++|+||+||||+|+...+..++..+++++|.+... .+.+...+|.+...+.. .+...+.
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~----- 66 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAG------------EERVRTWVGNGADVLVERALTWAGR----- 66 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhCccHHHHHHHHHhhccC-----
Confidence 57999999999999999988999999999998876433 23444555555443322 2222111
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
....... +.+...+.+.|..... ....++||+.++|+.|++.|++++++||+........++.+ ++..+
T Consensus 67 ----~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~- 135 (226)
T PRK13222 67 ----EPDEELL----EKLRELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL-GIADY- 135 (226)
T ss_pred ----CccHHHH----HHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCccC-
Confidence 1112222 2233334444444321 23579999999999999999999999999998888899886 99888
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.+++++++...||+|++|..+++++++++++|++|||+.+|+++|+++|+.++++.++......+. ...+++..
T Consensus 136 -f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~---~~~~~~~i 211 (226)
T PRK13222 136 -FSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIA---LSEPDVVI 211 (226)
T ss_pred -ccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchh---hcCCCEEE
Confidence 89999999999999999999999999999999999999999999999999999999988765333322 11233444
Q ss_pred cChhHHHHHHHH
Q 020871 304 VRLKDLELLLQN 315 (320)
Q Consensus 304 ~~~~~l~~~l~~ 315 (320)
.++.+|..+++.
T Consensus 212 ~~~~~l~~~l~~ 223 (226)
T PRK13222 212 DHFAELLPLLGL 223 (226)
T ss_pred CCHHHHHHHHHH
Confidence 456777777654
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-29 Score=200.97 Aligned_cols=184 Identities=29% Similarity=0.503 Sum_probs=141.1
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCccccC
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFD 145 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 145 (320)
+++|+||+||||+|+...+..++.++++++|.+.+. +......|.+.... ...+..++..
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~------ 61 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDK-------------QYNTSLGGLSREDILRAILKLRKPG------ 61 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCH-------------HHHHHcCCCCHHHHHHHHHHhcCCC------
Confidence 579999999999999999999999999999875321 12223334433332 3333333211
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc
Q 020871 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL 225 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f 225 (320)
.+... .+.+.+.+.+.|.+.+......++||+.++|+.|++.|++++++||+ ..+...++.. |+..+ |
T Consensus 62 ---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~-~l~~~--f 129 (185)
T TIGR02009 62 ---LSLET----IHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL-GLTDY--F 129 (185)
T ss_pred ---CCHHH----HHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc-ChHHH--C
Confidence 11122 22333444445555443344689999999999999999999999998 5577788886 99999 9
Q ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEE
Q 020871 226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 226 d~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
+.++++++.+..||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|+|
T Consensus 130 ~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 130 DAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999999999999999999999999999998864
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=200.88 Aligned_cols=184 Identities=27% Similarity=0.469 Sum_probs=141.8
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCcc
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSST 142 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 142 (320)
+.++++|+||+||||+|+...+..+|..++.++|.+.+. +.+....|...... ...+..++..
T Consensus 2 ~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~--- 65 (188)
T PRK10725 2 YDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDE-------------QAMVALNGSPTWRIAQAIIELNQAD--- 65 (188)
T ss_pred CCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCC---
Confidence 446899999999999999999999999999999875422 23444455444332 3333333321
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
...++ +...+...+.... .....++|+ .++|..|++. ++++|+||+....+...++++ |+..+
T Consensus 66 ---------~~~~~----~~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~-~l~~~ 128 (188)
T PRK10725 66 ---------LDPHA----LAREKTEAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL-GLRRY 128 (188)
T ss_pred ---------CCHHH----HHHHHHHHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC-CcHhH
Confidence 01111 2222223333332 234567886 5899999876 899999999999999999997 99999
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEe
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 282 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~ 282 (320)
|+.++++++++..||+|++|..+++++|++|++||||||+.+|+++|+++|+.+|++.
T Consensus 129 --fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 129 --FDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred --ceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 9999999999999999999999999999999999999999999999999999999874
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-29 Score=206.62 Aligned_cols=185 Identities=26% Similarity=0.449 Sum_probs=139.9
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~ 144 (320)
++++|+||+||||+|+...+.++|.+++.++|++... ++ .+....|.+... ...++..+|++.
T Consensus 3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~---------~~---~~~~~~g~~~~~~~~~~~~~~~~~~---- 66 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSL---------EE---VFKRFKGVKLYEIIDIISKEHGVTL---- 66 (221)
T ss_pred CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCH---------HH---HHHHhcCCCHHHHHHHHHHHhCCCC----
Confidence 5899999999999999999999999999999976432 11 122333433333 233444455421
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
..+++. ..+.+.+...+ .....++||+.++|+.| +++++|+||+....+...++.. ++..+
T Consensus 67 --------~~~~~~----~~~~~~~~~~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~-~l~~~-- 127 (221)
T PRK10563 67 --------AKAELE----PVYRAEVARLF-DSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKT-GMLHY-- 127 (221)
T ss_pred --------CHHHHH----HHHHHHHHHHH-HccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhc-ChHHh--
Confidence 112222 22222222221 23468999999999999 4899999999988899889886 99988
Q ss_pred cc-eEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 225 LD-CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 225 fd-~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
|+ .++++++++..||+|++|..+++++|++|++|+||||+.+|+++|+++|+.++++..+.
T Consensus 128 F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~ 189 (221)
T PRK10563 128 FPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADP 189 (221)
T ss_pred CcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCC
Confidence 85 67788889999999999999999999999999999999999999999999999886543
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-29 Score=207.16 Aligned_cols=107 Identities=24% Similarity=0.450 Sum_probs=101.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|+++|++++++||+........++.+ |+..+ |+.++++++++..||+|++|..+++++|++|++
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~--f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL-GVRDF--FDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC-ChHHh--ccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 579999999999999999999999999988888889886 99998 999999999999999999999999999999999
Q ss_pred EEEEecCH-hhHHHHHHcCCeEEEEeCCCCc
Q 020871 258 CLVVEDSV-IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 258 ~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
|+||||+. +|+.+|+++|+.+|++.++...
T Consensus 170 ~~~igDs~~~di~~A~~aG~~~i~~~~~~~~ 200 (221)
T TIGR02253 170 AVMVGDRLDKDIKGAKNLGMKTVWINQGKSS 200 (221)
T ss_pred EEEECCChHHHHHHHHHCCCEEEEECCCCCc
Confidence 99999998 8999999999999999887653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=200.16 Aligned_cols=182 Identities=28% Similarity=0.519 Sum_probs=138.5
Q ss_pred EEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHhcCCCCccccCCC
Q 020871 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIFDNP 147 (320)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 147 (320)
+|+||+||||+|+...+..+|+++++++|++... +......|.+... +...+.+.|+.
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~-------- 59 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDE-------------EFNESLKGVSREDSLERILDLGGKK-------- 59 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCChHHHHHHHHHhcCCC--------
Confidence 5899999999999999999999999999886432 1223344444333 33444554542
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc
Q 020871 148 PVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226 (320)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd 226 (320)
.+.....++.+. +.+.|.+.+.. ....++||+.++|+.|+++|++++++||+.. ....++.+ |+..+ |+
T Consensus 60 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~-~l~~~--f~ 129 (185)
T TIGR01990 60 -YSEEEKEELAER----KNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL-GLIDY--FD 129 (185)
T ss_pred -CCHHHHHHHHHH----HHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc-CcHhh--Cc
Confidence 112222222222 33333333221 2347899999999999999999999998754 45677886 99988 99
Q ss_pred eEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEE
Q 020871 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 227 ~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
.++++++++..||+|++|..++++++++|++|+||||+.+|+++|+++|+.+|+|
T Consensus 130 ~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 130 AIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred EEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence 9999999999999999999999999999999999999999999999999999987
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=204.97 Aligned_cols=128 Identities=22% Similarity=0.367 Sum_probs=107.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC-C
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE-K 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~-~ 256 (320)
..++||+.++|+.|+ .|++++++||+........++++ |+..+ ||.++++++++..||+|++|..+++++|+.+ +
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~-~l~~~--fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT-GLRDY--FDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC-ChHHH--cCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 579999999999999 57999999999999888888886 99998 9999999999999999999999999999854 7
Q ss_pred CEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 257 DCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 257 ~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
+|+||||+. +|+++|+++|+.+++++++.... . ....+++...++.+|.+++.
T Consensus 170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~--~---~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 170 RVLMVGDNLHSDILGGINAGIDTCWLNAHGREQ--P---EGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred cEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCC--C---CCCCCeEEECCHHHHHHHHh
Confidence 999999998 69999999999999997543221 1 11234555556777777665
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=203.32 Aligned_cols=106 Identities=23% Similarity=0.388 Sum_probs=100.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|+++|++++++||++...+...++++ |+..+ ||.++++++++..||+|++|..+++++|++|++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-gl~~~--fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~ 167 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA-GLDDP--FDAVLSADAVRAYKPAPQVYQLALEALGVPPDE 167 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC-CChhh--hheeEehhhcCCCCCCHHHHHHHHHHhCCChhh
Confidence 578999999999999999999999999999999999886 99988 999999999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
|+||||+.+|+++|+++|+.+|++++++.
T Consensus 168 ~~~vgD~~~Di~~A~~~G~~~i~v~r~~~ 196 (198)
T TIGR01428 168 VLFVASNPWDLGGAKKFGFKTAWVNRPGE 196 (198)
T ss_pred EEEEeCCHHHHHHHHHCCCcEEEecCCCC
Confidence 99999999999999999999999988653
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-28 Score=201.07 Aligned_cols=131 Identities=21% Similarity=0.347 Sum_probs=110.3
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
....++||+.++|+.|+++|++++++||+....+...++++ |+..+ |+.++++++++..||+|++|..+++++|++|
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~--fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p 166 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT-GLDAH--LDLLLSTHTFGYPKEDQRLWQAVAEHTGLKA 166 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC-CcHHH--CCEEEEeeeCCCCCCCHHHHHHHHHHcCCCh
Confidence 34689999999999999999999999999999888888886 99998 9999999999999999999999999999999
Q ss_pred CCEEEEecCHhhHHHHHHcCCe-EEEEeCCCCchhhccccceecccccccChhHHHHHHHHh
Q 020871 256 KDCLVVEDSVIGLQAATRAGMA-CVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~-~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
++|+||||+..|+++|+++|+. +++|.++...... .+....+ +++++.++++.+
T Consensus 167 ~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~l 221 (224)
T PRK14988 167 ERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAE--KQYQRHP-----SLNDYRRLIPSL 221 (224)
T ss_pred HHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccc--hhccCCC-----cHHHHHHHhhhh
Confidence 9999999999999999999997 5667776544322 2222222 466677777654
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=203.64 Aligned_cols=217 Identities=14% Similarity=0.199 Sum_probs=146.5
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcC------------ChhhHHHHH
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG------------GKPKMRWYF 133 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 133 (320)
++|+|+||+||||+|+...+..+++.+++.++..... .-.+.....+.++..++. ....+...+
T Consensus 9 ~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 84 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPA----LRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAM 84 (238)
T ss_pred CceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcc----hhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHH
Confidence 6899999999999999999999898887665321100 000112222222222111 011233445
Q ss_pred HhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHH
Q 020871 134 KEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL 213 (320)
Q Consensus 134 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l 213 (320)
..+|++ ....+... +.....+.... ....++||+.++|+.|++. ++++++||++.. +
T Consensus 85 ~~~g~~-----------~~~~~~~~----~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~ 141 (238)
T PRK10748 85 LDAGLS-----------AEEASAGA----DAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----P 141 (238)
T ss_pred HHcCCC-----------HHHHHHHH----HHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----H
Confidence 555543 11111111 11112222221 2357999999999999986 999999998875 2
Q ss_pred HHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc
Q 020871 214 ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK 292 (320)
Q Consensus 214 ~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~ 292 (320)
+.. |+..+ |+.++++++++..||+|++|..+++++|++|++|+||||+. .|+.+|+++|+.++|++.+...... .
T Consensus 142 ~~~-gl~~~--fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~-~ 217 (238)
T PRK10748 142 ELF-GLGDY--FEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQ-T 217 (238)
T ss_pred HHC-CcHHh--hceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccc-c
Confidence 454 99999 99999999999999999999999999999999999999995 9999999999999999886533111 1
Q ss_pred ccceecccccccChhHHHHHH
Q 020871 293 DAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 293 ~~~~~~~~~~~~~~~~l~~~l 313 (320)
....+.|++...++.+|.++|
T Consensus 218 ~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 218 WDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred ccccCCCCEEECCHHHHHhhC
Confidence 233456777666666666553
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=235.13 Aligned_cols=220 Identities=30% Similarity=0.435 Sum_probs=168.9
Q ss_pred CCCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHH-HHhcCCCC
Q 020871 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPS 140 (320)
Q Consensus 62 ~~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 140 (320)
..++++++|+|||||||+|+...+.++|.++++++|++... +.+...+|.+...+... ...++++.
T Consensus 70 ~~~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~-------------e~~~~~~G~~~~~~~~~~~~~~~l~~ 136 (1057)
T PLN02919 70 EEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTV-------------EDFVPFMGTGEANFLGGVASVKGVKG 136 (1057)
T ss_pred CcCCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCCHHHHHHHHHHhcCCCC
Confidence 44678999999999999999999999999999999986432 33455566655444322 22233210
Q ss_pred ccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 141 STIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
...++..+.+.+.+.+.|... ....++||+.++|+.|+++|++++|+||+....+...++++ |+.
T Consensus 137 -----------~~~~~~~~~~~~~~~~~~~~~---~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~-gl~ 201 (1057)
T PLN02919 137 -----------FDPDAAKKRFFEIYLEKYAKP---NSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA-GLP 201 (1057)
T ss_pred -----------CCHHHHHHHHHHHHHHHhhhc---ccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc-CCC
Confidence 011222222222222222211 22347999999999999999999999999999999999887 885
Q ss_pred -cccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc--cccee
Q 020871 221 -RFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK--DAIAI 297 (320)
Q Consensus 221 -~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~--~~~~~ 297 (320)
.+ |+.+++++++...||+|++|..+++++|+.|++|+||||+..|+++|+++||.+|++.++.. .+++. .++++
T Consensus 202 ~~~--Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~-~~~L~~~~a~~v 278 (1057)
T PLN02919 202 LSM--FDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLS-EEILKDAGPSLI 278 (1057)
T ss_pred hhH--CCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCC-HHHHhhCCCCEE
Confidence 67 89999999999999999999999999999999999999999999999999999999998764 34443 56788
Q ss_pred cccccccChhHHHHH
Q 020871 298 YPDLSNVRLKDLELL 312 (320)
Q Consensus 298 ~~~~~~~~~~~l~~~ 312 (320)
+.++.++++.++...
T Consensus 279 i~~l~el~~~~~~~~ 293 (1057)
T PLN02919 279 RKDIGNISLSDILTG 293 (1057)
T ss_pred ECChHHCCHHHHHhc
Confidence 999999987777543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=199.62 Aligned_cols=187 Identities=22% Similarity=0.382 Sum_probs=132.6
Q ss_pred cEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHH------h----cCChhh-----HHHH
Q 020871 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ------I----GGGKPK-----MRWY 132 (320)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~-----~~~~ 132 (320)
|+|+||+||||+|+...+..++.++++++|++..... ....+.+.+... + |..... +...
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDE-----LEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHH-----HHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5899999999999999999999999999998653300 000111111111 0 111111 1122
Q ss_pred HHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHH
Q 020871 133 FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (320)
Q Consensus 133 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~ 212 (320)
+...|.+ +.. .+...+.+.+..........++||+.++|+.|+++|++++|+||+... ....
T Consensus 76 ~~~~~~~----------~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~ 137 (203)
T TIGR02252 76 FGRAGVP----------DPE-------SFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGL 137 (203)
T ss_pred HHhcCCC----------Cch-------hHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHH
Confidence 2222210 011 111222222222211233578999999999999999999999998875 4677
Q ss_pred HHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEE
Q 020871 213 LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVI 280 (320)
Q Consensus 213 l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~ 280 (320)
++.+ |+..+ |+.++++++++..||+|++|..+++++|++|++|+||||+. +|+++|+++|+.+||
T Consensus 138 l~~~-~l~~~--fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 138 LEAL-GLLEY--FDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HHHC-CcHHh--cceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 7776 99888 99999999999999999999999999999999999999998 899999999999875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=199.68 Aligned_cols=186 Identities=18% Similarity=0.335 Sum_probs=137.7
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHH-------h--cC-Chhh-----HHH
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ-------I--GG-GKPK-----MRW 131 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~-~~~~-----~~~ 131 (320)
+|+|+||+||||+|+......++.+++.++|+.... .....+... + +. .... +..
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTE----------DMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSA 70 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccH----------HHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 589999999999999999999999999988875422 111111100 0 00 0000 011
Q ss_pred HHHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHH
Q 020871 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (320)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~ 211 (320)
.++..+... . .+.+.+.|...+. ....++||+.++|+.|+++ ++++++||+....+..
T Consensus 71 ~~~~~~~~~------------~--------~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~ 128 (224)
T TIGR02254 71 LLKEYNTEA------------D--------EALLNQKYLRFLE-EGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYK 128 (224)
T ss_pred HHHHhCCCC------------c--------HHHHHHHHHHHHh-ccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHH
Confidence 111111100 0 0012223333321 2357999999999999999 9999999999998998
Q ss_pred HHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHc-CCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCc
Q 020871 212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL-GISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 212 ~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l-~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
.++.+ ++..+ ||.++++++++..||+|++|..+++++ |++|++|+||||+. +|+++|+++|+.+++++++...
T Consensus 129 ~l~~~-~l~~~--fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~ 203 (224)
T TIGR02254 129 RLRKS-GLFPF--FDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHP 203 (224)
T ss_pred HHHHC-CcHhh--cCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCC
Confidence 89886 99999 999999999999999999999999999 99999999999998 7999999999999999876443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=217.98 Aligned_cols=217 Identities=18% Similarity=0.247 Sum_probs=156.5
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHH-HhcCCCCcc
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSST 142 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 142 (320)
.+++++|+||+||||+|+...+..+|++++.+++..... . .....+.+....|.+.......+ ...+
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~------~-~~~~~~~~~~~~G~~~~~~~~~l~~~~~----- 305 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLW------D-TVTPIDKYREIMGVPLPKVWEALLPDHS----- 305 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhccc------C-CCCCHHHHHHHcCCChHHHHHHHhhhcc-----
Confidence 457899999999999999999999999999987421000 0 00002345556666655433222 1111
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
....+.+...+.+.+...+.....+++||+.++|+.|+++|++++|+||+....+...++.+ ++..+
T Consensus 306 ------------~~~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~-~l~~~ 372 (459)
T PRK06698 306 ------------LEIREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY-DLDQW 372 (459)
T ss_pred ------------hhHHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC-CcHhh
Confidence 01122333334444444333345689999999999999999999999999999999999986 99988
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccc
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~ 302 (320)
|+.+++++++. .||+|+.|..++++++ |++|++|||+.+|+++|+++|+.+|++.++....+.+..++++
T Consensus 373 --f~~i~~~d~v~-~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~----- 442 (459)
T PRK06698 373 --VTETFSIEQIN-SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIV----- 442 (459)
T ss_pred --cceeEecCCCC-CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEE-----
Confidence 99999998874 4677789999998875 6899999999999999999999999998876554444334444
Q ss_pred ccChhHHHHHHHH
Q 020871 303 NVRLKDLELLLQN 315 (320)
Q Consensus 303 ~~~~~~l~~~l~~ 315 (320)
..++.+|.+++..
T Consensus 443 i~~l~el~~~l~~ 455 (459)
T PRK06698 443 IDDLLELKGILST 455 (459)
T ss_pred eCCHHHHHHHHHH
Confidence 4456666666653
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=191.55 Aligned_cols=204 Identities=22% Similarity=0.362 Sum_probs=151.1
Q ss_pred cCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCccccCCCCCCch
Q 020871 74 CDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDNPPVTDD 152 (320)
Q Consensus 74 ~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~ 152 (320)
|||||+|+...+..+|.+++.++|++.+. +.+...+|.+.... ..++...+++. ..
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~----------~~ 57 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDW-------------SLKAKMMGKKAIEAARIFVEESGLSD----------SL 57 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCH-------------HHHHHccCCCHHHHHHHHHHHhCCCC----------CC
Confidence 79999999999999999999999985321 23445566655443 33444444421 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC
Q 020871 153 DQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD 232 (320)
Q Consensus 153 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~ 232 (320)
..+.+.+ .....+.... ....++||+.++|+.|++.|++++|+||+........+....++..+ |+.+++++
T Consensus 58 ~~~~~~~----~~~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~ 129 (220)
T PLN02811 58 SPEDFLV----EREAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGD 129 (220)
T ss_pred CHHHHHH----HHHHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECC
Confidence 1111111 1222222221 23578999999999999999999999999876554433333367777 89999999
Q ss_pred --CCCCCCCCHHHHHHHHHHcC---CCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChh
Q 020871 233 --DVKQKKPDPSIYVTAAKRLG---ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLK 307 (320)
Q Consensus 233 --~~~~~KP~~~~~~~~~~~l~---~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~ 307 (320)
+++.+||+|++|..++++++ ++|++|+||||+..|+++|+++|+.+|++.++......+..++.++.++.++.+.
T Consensus 130 ~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~ 209 (220)
T PLN02811 130 DPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPE 209 (220)
T ss_pred hhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHH
Confidence 88889999999999999997 9999999999999999999999999999988765544456677888888887766
Q ss_pred H
Q 020871 308 D 308 (320)
Q Consensus 308 ~ 308 (320)
+
T Consensus 210 ~ 210 (220)
T PLN02811 210 E 210 (220)
T ss_pred H
Confidence 6
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=187.00 Aligned_cols=174 Identities=26% Similarity=0.503 Sum_probs=135.2
Q ss_pred EEEecCCccccchHHHHHHHHHH-HHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHhcCCCCccccCCC
Q 020871 70 LIFDCDGVIIESEHLHRQAYNDA-FSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIFDNP 147 (320)
Q Consensus 70 viFD~DGTL~d~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 147 (320)
|+||+||||+|+...+.+++... +++++.+.. .+.++...+..... +..++..++..
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEIS-------------AEELRELFGKSYEEALERLLERFGID-------- 59 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHH-------------HHHHHHHTTSHHHHHHHHHHHHHHHH--------
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCC-------------HHHHHHHhCCCHHHHHHHhhhccchh--------
Confidence 79999999999999888888874 667766421 23444444433332 22333332110
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcce
Q 020871 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227 (320)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~ 227 (320)
...+.+. +.+........++||+.++|+.|+++|++++++||++...+...++++ |+..+ |+.
T Consensus 60 ----------~~~~~~~----~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~-~~~~~--f~~ 122 (176)
T PF13419_consen 60 ----------PEEIQEL----FREYNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL-GLDDY--FDE 122 (176)
T ss_dssp ----------HHHHHHH----HHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT-THGGG--CSE
T ss_pred ----------HHHHHHH----hhhhhhhhccchhhhhhhhhhhcccccceeEEeecCCccccccccccc-ccccc--ccc
Confidence 1112222 222211245789999999999999999999999999999999999997 99988 999
Q ss_pred EEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEE
Q 020871 228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 228 v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
++++++.+..||++++|..+++++|++|++|+||||+..|+++|+++|+.+|+|
T Consensus 123 i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 123 IISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ccccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999999999999999999999999999999999986
|
... |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-27 Score=195.92 Aligned_cols=131 Identities=26% Similarity=0.384 Sum_probs=115.6
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
.++++|++.+.|+.|+.. ++++++||+........++++ |+..+ ||.++.+++++..||+|++|..+++++|++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~-gl~~~--Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~ 172 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL-GLLDY--FDAVFISEDVGVAKPDPEIFEYALEKLGVPPE 172 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc-CChhh--hheEEEecccccCCCCcHHHHHHHHHcCCCcc
Confidence 368999999999999999 999999999988899999997 89999 99999999999999999999999999999999
Q ss_pred CEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 257 DCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 257 ~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
+|+||||+. ||+.+|+++||.+||++.+.... .... ..+++..-++.+|.+++.+
T Consensus 173 ~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~---~~~~-~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 173 EALFVGDSLENDILGARALGMKTVWINRGGKPL---PDAL-EAPDYEISSLAELLDLLER 228 (229)
T ss_pred eEEEECCChhhhhHHHHhcCcEEEEECCCCCCC---CCCc-cCCceEEcCHHHHHHHHhh
Confidence 999999999 68899999999999998876543 1222 5567677778888877764
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=190.30 Aligned_cols=108 Identities=21% Similarity=0.342 Sum_probs=93.9
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhh--HHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~--~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
...++||+.++|+.|+++|++++++||+.... ....+... ++..+ ||.++++++++..||+|++|..+++++|++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~-~l~~~--fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~ 168 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG-DIMAL--FDAVVESCLEGLRKPDPRIYQLMLERLGVA 168 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh-hhHhh--CCEEEEeeecCCCCCCHHHHHHHHHHcCCC
Confidence 46799999999999999999999999987543 22233333 77778 999999999999999999999999999999
Q ss_pred CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 255 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
|++|+||||+..|+.+|+++|+.+|++.++...
T Consensus 169 ~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~ 201 (211)
T TIGR02247 169 PEECVFLDDLGSNLKPAAALGITTIKVSDEEQA 201 (211)
T ss_pred HHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHH
Confidence 999999999999999999999999999775433
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=181.48 Aligned_cols=99 Identities=22% Similarity=0.408 Sum_probs=91.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCC----CCCCHHHHHHHHHHcC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ----KKPDPSIYVTAAKRLG 252 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~----~KP~~~~~~~~~~~l~ 252 (320)
...++||+.++|+.|+ ++++++||+........++.+ |+..+ ||.++++++++. .||+|++|..+++++|
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~-gl~~~--fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 155 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL-GIEDC--FDGIFCFDTANPDYLLPKPSPQAYEKALREAG 155 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc-CcHhh--hCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence 3579999999999997 479999999999999999997 99988 999999999887 5999999999999999
Q ss_pred CCCCCEEEEecCHhhHHHHHHcCCeEEEE
Q 020871 253 ISEKDCLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 253 ~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
++|++|+||||+..|+++|+++|+.+++|
T Consensus 156 ~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 156 VDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 99999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-25 Score=180.46 Aligned_cols=180 Identities=21% Similarity=0.197 Sum_probs=128.0
Q ss_pred cEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChh---------hHHHHHHhcCC
Q 020871 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP---------KMRWYFKEHGW 138 (320)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~g~ 138 (320)
++|+|||||||+|+...+..+++++++++|..... .+.+....|.+.. ....++.....
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 68 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVT------------HADIDHTKLAGNANNDWQLTHRLVVDGLNSASS 68 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHcCCCCC------------HHHHHHHHHccCccCchHHHHHHHHHhhhcccc
Confidence 47999999999999999999999999999753222 1334445554321 11122211100
Q ss_pred CCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH--------hCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHH
Q 020871 139 PSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK--------SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI 210 (320)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--------~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~ 210 (320)
.........+++. +.+.+.|..... .....+.+++.++|+.|++.|++++|+||+....+.
T Consensus 69 -------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~ 137 (197)
T TIGR01548 69 -------ERVRDAPTLEAVT----AQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAA 137 (197)
T ss_pred -------hhccCCccHHHHH----HHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHH
Confidence 0000112222222 223333322100 001235556699999999999999999999999999
Q ss_pred HHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHc
Q 020871 211 LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 274 (320)
Q Consensus 211 ~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~a 274 (320)
..++.+ |+..+ |+.+++++++.. ||+|+.|..+++++|++|++|+||||+.+|+++|+++
T Consensus 138 ~~l~~~-gl~~~--f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 138 KFLTTH-GLEIL--FPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHc-Cchhh--CCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 999997 99999 999999999887 9999999999999999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-24 Score=174.24 Aligned_cols=209 Identities=27% Similarity=0.380 Sum_probs=156.6
Q ss_pred CCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHH-hcCCCCc
Q 020871 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFK-EHGWPSS 141 (320)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~ 141 (320)
....+.+++||+||||+|++..+.++|+.++.+||...+. +......|....++...+- ..+.+
T Consensus 6 ~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~-------------~~~~~~mG~~~~eaa~~~~~~~~dp-- 70 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPW-------------DVKVKSMGKRTSEAARLFVKKLPDP-- 70 (222)
T ss_pred cccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChH-------------HHHHHHcCCCHHHHHHHHHhhcCCC--
Confidence 3456889999999999999999999999999999985433 3344466666555554443 33322
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
-..+++..+. .+....++ ....+.||+.++++.|+.+|++++++|+.++...+..+.++.++-.
T Consensus 71 ----------~s~ee~~~e~----~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~ 134 (222)
T KOG2914|consen 71 ----------VSREEFNKEE----EEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK 134 (222)
T ss_pred ----------CCHHHHHHHH----HHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH
Confidence 2223333332 33333332 3457899999999999999999999999999988888888744666
Q ss_pred ccCcceEEe--CCCCCCCCCCHHHHHHHHHHcCCCC-CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceec
Q 020871 222 FEGLDCFLA--GDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298 (320)
Q Consensus 222 ~~~fd~v~~--~~~~~~~KP~~~~~~~~~~~l~~~~-~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~ 298 (320)
. |+.++. +.++..+||+|++|..+++++|..| +.|++|+|++..+++|+.|||.+|++++.......-..+..++
T Consensus 135 ~--f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~ 212 (222)
T KOG2914|consen 135 N--FSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLIL 212 (222)
T ss_pred h--cCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceec
Confidence 6 777777 5678899999999999999999999 9999999999999999999999999988443322223445555
Q ss_pred cccccc
Q 020871 299 PDLSNV 304 (320)
Q Consensus 299 ~~~~~~ 304 (320)
.++.+.
T Consensus 213 ~~~~~~ 218 (222)
T KOG2914|consen 213 ESLEDF 218 (222)
T ss_pred cccccc
Confidence 554443
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=178.00 Aligned_cols=110 Identities=21% Similarity=0.352 Sum_probs=98.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.++||+.++|+.|++.|++++++||+........+....++..+ ||.++++++++..||+|++|..+++++|++|++|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 58999999999999999999999999987666555443477778 9999999999999999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhh
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQD 290 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~ 290 (320)
+||||+..|+++|+++|+.++++.++....+.
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~ 193 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDKQTIPDY 193 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCCccHHHH
Confidence 99999999999999999999999887555433
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=174.40 Aligned_cols=100 Identities=37% Similarity=0.707 Sum_probs=92.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.|++++++||+.... ...+.++ |+..+ |+.++++++++.+||+|+.|..+++++|++|++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~-~l~~~--f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 159 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL-GLRDL--FDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEE 159 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc-CCHHH--CCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcce
Confidence 5799999999999999999999999999887 5555555 99988 999999999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEE
Q 020871 258 CLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
|+||||+..|+++|+++|+.+|+|
T Consensus 160 ~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 160 CLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEEEcCCHHHHHHHHHcCCEEEeC
Confidence 999999999999999999999874
|
HAD subfamilies caused by an overly broad single model. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.1e-26 Score=184.02 Aligned_cols=207 Identities=19% Similarity=0.287 Sum_probs=141.1
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCC-----
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGW----- 138 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----- 138 (320)
.+.+++|+||++|||+.........|..+.+.+|+++... .+...+......+......+|.
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~-------------~~~~~~~~~~~~~~~~~p~~~~~~g~l 70 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDS-------------LIETIFRKDFKKMSEKGPFFGLYSGEL 70 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHH-------------HHhHhhhHHHHhhcccCCcccccCCcc
Confidence 4579999999999999988888999999999999985431 1111111111000000000000
Q ss_pred CCc-----cccCCC-CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHH
Q 020871 139 PSS-----TIFDNP-PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (320)
Q Consensus 139 ~~~-----~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~ 212 (320)
+.. -+.... .......+...+.+ ....|.... ...+.+.+++.++++.||.+|+.++++||.+...- ..
T Consensus 71 ~~~~ww~~lv~~~f~~~~~~~~~~~~~~~---~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~ 145 (237)
T KOG3085|consen 71 TLSQWWPKLVESTFGKAGIDYEEELLENF---SFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LL 145 (237)
T ss_pred cHHHHHHHHHHHHhccccchhHHHHHhhh---hhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HH
Confidence 000 000000 00111111111111 111222211 23567888999999999999999999999988744 56
Q ss_pred HHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 213 LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 213 l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
+... |+..+ ||.++.|++.+..||+|++|+.+++++++.|++|+||||+. ||+++|+++||.++.|.+.......+
T Consensus 146 l~~~-~l~~~--fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 146 LLPL-GLSAY--FDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred hhcc-CHHHh--hhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 6665 99888 99999999999999999999999999999999999999999 79999999999999987766554433
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-24 Score=167.83 Aligned_cols=154 Identities=24% Similarity=0.446 Sum_probs=119.0
Q ss_pred EEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccccCCCC
Q 020871 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPP 148 (320)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 148 (320)
+|+||+||||+|+...+..+|++++++++.. .+.+....|.+...+......
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~g~~~~~~~~~~~~------------- 52 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGED---------------FQALKALRGLAEELLYRIATS------------- 52 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhccc---------------HHHHHHHHccChHHHHHHHHH-------------
Confidence 4899999999999999999999999988752 123333333222111111100
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceE
Q 020871 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (320)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v 228 (320)
.+.+. . |. .....+||+.++|+.|++.|++++++||+........++.+ +..+ |+.+
T Consensus 53 ---------~~~~~----~-~~-----~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~~~--f~~i 109 (154)
T TIGR01549 53 ---------FEELL----G-YD-----AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LGDY--FDLI 109 (154)
T ss_pred ---------HHHHh----C-cc-----hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HHhc--CcEE
Confidence 11111 0 11 12357799999999999999999999999999888888774 5667 8999
Q ss_pred EeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcC
Q 020871 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 275 (320)
Q Consensus 229 ~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG 275 (320)
+++++++ .||+|++|..+++++|++| +|+||||+..|+++|+++|
T Consensus 110 ~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 110 LGSDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred EecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 9999888 9999999999999999999 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=172.30 Aligned_cols=173 Identities=13% Similarity=0.160 Sum_probs=115.7
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~ 144 (320)
|+|+|+||+||||+|+. .++..+++++|++. +.+...+|.+... +... ++.
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~---------------~~~~~~~g~~~~~~~~~~---~~~------ 52 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT---------------DHILKMIQDERFRDPGEL---FGC------ 52 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhcCCCH---------------HHHHHHHhHhhhcCHHHH---hcc------
Confidence 48999999999999943 45667777787642 2333333332211 1111 110
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc-
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE- 223 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~- 223 (320)
+..... .+...+ +.... .....++||+.++|+.|++. ++++++||.........++.+ ++..++
T Consensus 53 -----~~~~~~----~~~~~~---~~~~~-~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~-~l~~~f~ 117 (197)
T PHA02597 53 -----DQELAK----KLIEKY---NNSDF-IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF-NLNALFP 117 (197)
T ss_pred -----cHHHHH----HHhhhh---hHHHH-HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC-CHHHhCC
Confidence 111111 111111 11111 12357999999999999997 568888998776555555554 666542
Q ss_pred -CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHc--CCeEEEEeCCCC
Q 020871 224 -GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA--GMACVITYTSST 286 (320)
Q Consensus 224 -~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~a--G~~~v~v~~~~~ 286 (320)
.|+.++++++. ||+|++|..+++++| |++|+||||+.+|+++|+++ |+.+|+++++..
T Consensus 118 ~~f~~i~~~~~~---~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 118 GAFSEVLMCGHD---ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred CcccEEEEeccC---cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh
Confidence 15777777663 677899999999999 88999999999999999999 999999988853
|
2 hypothetical protein; Provisional |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-24 Score=170.00 Aligned_cols=166 Identities=19% Similarity=0.305 Sum_probs=117.4
Q ss_pred EEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCC-hhHHHH-HHHHhcCChh-------hHHHHHHhcCCC
Q 020871 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD-PEFYDV-LQNQIGGGKP-------KMRWYFKEHGWP 139 (320)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~-------~~~~~~~~~g~~ 139 (320)
+|+||+||||+|+...+..++..++.+.+..... |. .++... .....|.... ....++..+|++
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 73 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDL-------WRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLD 73 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHH-------HHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999998887764421000 00 011111 1222221111 233444444443
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCC
Q 020871 140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (320)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l 219 (320)
.. .. . .+.+...+ ..+.++||+.++|+ +++|+||+....+...++++ |+
T Consensus 74 ~~---------~~--------~----~~~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~-~l 122 (175)
T TIGR01493 74 AE---------PK--------Y----GERLRDAY--KNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA-GL 122 (175)
T ss_pred CC---------HH--------H----HHHHHHHH--hcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC-CC
Confidence 10 00 1 11122211 23579999999998 37899999999999999887 99
Q ss_pred ccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHc
Q 020871 220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 274 (320)
Q Consensus 220 ~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~a 274 (320)
..+ |+.++++++++..||+|++|..+++++|++|++|+||||+.+|+.+|+++
T Consensus 123 ~~~--fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 123 PWY--FDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHH--HhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 999 99999999999999999999999999999999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.4e-22 Score=166.83 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=85.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEE-------eC---CCCCCCCCCHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFL-------AG---DDVKQKKPDPSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~-------~~---~~~~~~KP~~~~~~~~ 247 (320)
.+++||+.++|+.|+++|++++++||+....+...++.+ |+..+ |+..+ .+ .....++|++..|..+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL-GLDAA--FANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCce--EeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 579999999999999999999999999999888888886 88877 54322 11 1223356789999999
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
++++++++++|+||||+.+|+++|+.+|+.+++
T Consensus 161 ~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~ 193 (219)
T TIGR00338 161 LRKEGISPENTVAVGDGANDLSMIKAAGLGIAF 193 (219)
T ss_pred HHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence 999999999999999999999999999998654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-21 Score=159.78 Aligned_cols=175 Identities=17% Similarity=0.219 Sum_probs=115.7
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHh-cCCCCcc
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSST 142 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~ 142 (320)
++++|+|+||+||||++++ .+..+++++|... +..+..+...++ ...+.+.+.. .+...
T Consensus 9 ~~~~k~viFDfDGTL~~~~-----~~~~~~~~~g~~~------------~~~~~~~~~~~g-~~~~~~~~~~~~~~~~-- 68 (224)
T PLN02954 9 WRSADAVCFDVDSTVCVDE-----GIDELAEFCGAGE------------AVAEWTAKAMGG-SVPFEEALAARLSLFK-- 68 (224)
T ss_pred HccCCEEEEeCCCcccchH-----HHHHHHHHcCChH------------HHHHHHHHHHCC-CCCHHHHHHHHHHHcC--
Confidence 5679999999999999974 3467777777631 112222232332 2233332322 11110
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc--
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-- 220 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~-- 220 (320)
.. .+. ..+.+. .....++||+.++|+.|+++|++++|+|++....++..++.+ |+.
T Consensus 69 ---------~~----~~~----~~~~~~----~~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~-gi~~~ 126 (224)
T PLN02954 69 ---------PS----LSQ----VEEFLE----KRPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL-GIPPE 126 (224)
T ss_pred ---------CC----HHH----HHHHHH----HccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh-CCChh
Confidence 00 011 111122 123468999999999999999999999999999999999986 886
Q ss_pred cccCcceE--------EeCCC----CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 221 RFEGLDCF--------LAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 221 ~~~~fd~v--------~~~~~----~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
.+ |+.. +.+.+ ....+|+|+.+..+++++|. ++|+||||+.+|+.+++.+|+.++...++
T Consensus 127 ~~--~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~ 198 (224)
T PLN02954 127 NI--FANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGG 198 (224)
T ss_pred hE--EEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCC
Confidence 34 4321 12211 12356788999999998885 68999999999999999988887655443
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=156.14 Aligned_cols=107 Identities=19% Similarity=0.290 Sum_probs=86.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchh--------hHHHHHHHhhCCccccCcceEE-eCCCCCCCCCCHHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKS--------SVILCLENLIGMERFEGLDCFL-AGDDVKQKKPDPSIYVTAA 248 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~--------~~~~~l~~~~~l~~~~~fd~v~-~~~~~~~~KP~~~~~~~~~ 248 (320)
..++||+.++|+.|+++|++++|+||+... .....++.. |+..+ |.... ++++.+..||+|++|..++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~~~~~~~~~~~~~KP~p~~~~~~~ 103 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF-GFDDI--YLCPHKHGDGCECRKPSTGMLLQAA 103 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC-CcCEE--EECcCCCCCCCCCCCCCHHHHHHHH
Confidence 368999999999999999999999998641 122234443 55544 33222 3566678999999999999
Q ss_pred HHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 249 ~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
++++++|++|+||||+..|+.+|+++|+.+|++.++...
T Consensus 104 ~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 104 EKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred HHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 999999999999999999999999999999999887643
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=157.21 Aligned_cols=105 Identities=30% Similarity=0.386 Sum_probs=86.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch---------------hhHHHHHHHhhCCccccCcceEEeC-----CCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLAG-----DDVKQK 237 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---------------~~~~~~l~~~~~l~~~~~fd~v~~~-----~~~~~~ 237 (320)
+.++||+.++|+.|+++|++++|+||+.. ......++++ |+ . |+.++.+ ++++..
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~--~--f~~i~~~~~~~~~~~~~~ 102 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR-GG--R--LDGIYYCPHHPEDGCDCR 102 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CC--c--cceEEECCCCCCCCCcCC
Confidence 46999999999999999999999999863 2223344444 54 2 5666643 346789
Q ss_pred CCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 238 KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
||+|++|..+++++|++|++|+||||+.+|+.+|+++|+.++++.++...
T Consensus 103 KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~ 152 (181)
T PRK08942 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGV 152 (181)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCc
Confidence 99999999999999999999999999999999999999999999877543
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=4e-22 Score=155.37 Aligned_cols=106 Identities=33% Similarity=0.461 Sum_probs=85.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch---------------hhHHHHHHHhhCCccccCcceEE-eCCCCCCCCCCH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFL-AGDDVKQKKPDP 241 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---------------~~~~~~l~~~~~l~~~~~fd~v~-~~~~~~~~KP~~ 241 (320)
++++||+.++|+.|+++|++++++||+.. ..+...++.+ ++.....|.... ++++.+..||+|
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL-GVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC-CCceeEEEECCCCCCCCCCCCCCCH
Confidence 36899999999999999999999999873 3455566665 765210011111 145566789999
Q ss_pred HHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 242 ~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
++|..+++++|+++++|+||||+..|+++|+++|+.+||++++
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 9999999999999999999999999999999999999999764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=159.69 Aligned_cols=104 Identities=19% Similarity=0.104 Sum_probs=88.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCC----------HHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD----------PSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~----------~~~~~~~ 247 (320)
..++||+.++|+.|+++|++++|+||+....+...++.+ |+..+ |+..+..++.+..+|+ ++.+..+
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-g~~~~--~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL-NPDYV--YSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh-CCCeE--EEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 579999999999999999999999999999999999887 88877 7766666554443433 3678888
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
++++|+++++|+||||+.+|+++++.+|+.++....+
T Consensus 156 ~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 156 KRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 9999999999999999999999999999997665444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=155.98 Aligned_cols=119 Identities=21% Similarity=0.243 Sum_probs=91.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch---------------hhHHHHHHHhhCCccccCcceEEeC-----------
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLAG----------- 231 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---------------~~~~~~l~~~~~l~~~~~fd~v~~~----------- 231 (320)
+.++||+.++|+.|+++|++++++||... ......+++. ++. |+.++.+
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~----~~~i~~~~~~~~~~~~~~ 99 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER-DVD----LDGIYYCPHHPEGVEEFR 99 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CCC----ccEEEECCCCCccccccc
Confidence 47899999999999999999999999984 2222344443 443 4555432
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeE-EEEeCCCCchhhc-cccceecccc
Q 020871 232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAIAIYPDL 301 (320)
Q Consensus 232 ~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~-v~v~~~~~~~~~l-~~~~~~~~~~ 301 (320)
++...+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+ +++.++....... ..+++++.++
T Consensus 100 ~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~ 171 (176)
T TIGR00213 100 QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSL 171 (176)
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccH
Confidence 24557899999999999999999999999999999999999999998 7988876533222 1345555443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=155.36 Aligned_cols=106 Identities=19% Similarity=0.249 Sum_probs=90.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
..++||+.++|+.|+++|++++|+||+........+++. .++..+ |+.++.. . ...||+|+.|..+++++|++|
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--f~~~fd~-~-~g~KP~p~~y~~i~~~lgv~p 169 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--FSGYFDT-T-VGLKTEAQSYVKIAGQLGSPP 169 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--cceEEEe-C-cccCCCHHHHHHHHHHhCcCh
Confidence 469999999999999999999999999988777777663 255666 6666542 2 337999999999999999999
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
++|+||||+..|+++|+++|+.++++.+++..
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHTGQLVRPGND 201 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEEEEECCCCC
Confidence 99999999999999999999999999887643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-20 Score=158.63 Aligned_cols=129 Identities=18% Similarity=0.195 Sum_probs=97.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC-----cceEEeCC---CCCCCCCCHHHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-----LDCFLAGD---DVKQKKPDPSIYVTAAK 249 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~-----fd~v~~~~---~~~~~KP~~~~~~~~~~ 249 (320)
++++||+.++|+.|++.|++++|+|++.....+..++++ |+..... .+..+.+. ++..+||+++.+..+++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L-gld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL-RLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc-CCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 579999999999999999999999999988888777776 8765411 11222221 33356899999999999
Q ss_pred HcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 250 ~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
++|+++++|++|||+.||+.|++.||+.+++ + ..+.....++.++. ...+..+.-++.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-n---Akp~Vk~~Ad~~i~---~~~l~~~l~~~~ 316 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-H---AKPKVNEQAQVTIR---HADLMGVLCILS 316 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe-C---CCHHHHhhCCEEec---CcCHHHHHHHhc
Confidence 9999999999999999999999999999876 2 22333346666653 223445555443
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-21 Score=152.46 Aligned_cols=107 Identities=14% Similarity=0.057 Sum_probs=96.1
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCC-chhhHHHHHHHhhCCc---------cccCcceEEeCCCCCCCCCCHHHHHH
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAA-TKSSVILCLENLIGME---------RFEGLDCFLAGDDVKQKKPDPSIYVT 246 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~-~~~~~~~~l~~~~~l~---------~~~~fd~v~~~~~~~~~KP~~~~~~~ 246 (320)
...++||+.++|+.|+++|++++++||+ ....++..++.+ ++. .+ |+.++++++....||.+.++..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~-~l~~~~~~~~~~~~--Fd~iv~~~~~~~~kp~~~i~~~ 119 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF-EITYAGKTVPMHSL--FDDRIEIYKPNKAKQLEMILQK 119 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC-CcCCCCCcccHHHh--ceeeeeccCCchHHHHHHHHHH
Confidence 3579999999999999999999999998 777778888886 888 88 9999999887778888888888
Q ss_pred HHHHc--CCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 247 AAKRL--GISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 247 ~~~~l--~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
+.+.+ |++|++|+||||+..|+++|+++|+.++++.++..
T Consensus 120 ~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~ 161 (174)
T TIGR01685 120 VNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMD 161 (174)
T ss_pred hhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCcc
Confidence 88777 89999999999999999999999999999987654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-20 Score=143.40 Aligned_cols=97 Identities=33% Similarity=0.484 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCc--------hhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAAT--------KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR 250 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~--------~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~ 250 (320)
.++||+.++|+.|++.|++++++||+. .......++.+ ++.. +..+.+. +..||+|++|..++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~-~l~~----~~~~~~~--~~~KP~~~~~~~~~~~ 97 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL-GVPI----DVLYACP--HCRKPKPGMFLEALKR 97 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC-CCCE----EEEEECC--CCCCCChHHHHHHHHH
Confidence 689999999999999999999999998 67777788886 7753 3333333 5779999999999999
Q ss_pred c-CCCCCCEEEEec-CHhhHHHHHHcCCeEEEEe
Q 020871 251 L-GISEKDCLVVED-SVIGLQAATRAGMACVITY 282 (320)
Q Consensus 251 l-~~~~~~~v~VGD-~~~Dv~~a~~aG~~~v~v~ 282 (320)
+ +++|++|+|||| +..|+++|+++|+.+|+++
T Consensus 98 ~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 98 FNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred cCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 9 599999999999 6899999999999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.8e-20 Score=145.44 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=90.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCc---------------hhhHHHHHHHhhCCccccCcceE-Ee----CCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCF-LA----GDDVKQK 237 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~---------------~~~~~~~l~~~~~l~~~~~fd~v-~~----~~~~~~~ 237 (320)
+.++||+.++|+.|+++|++++++||.. ...+...++.+ |+. |+.+ ++ +++....
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----fd~ii~~~~~~~~~~~~~ 102 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ-GII----FDDVLICPHFPDDNCDCR 102 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC-CCc----eeEEEECCCCCCCCCCCC
Confidence 4799999999999999999999999973 34566667776 775 4655 44 5788889
Q ss_pred CCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 238 KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
||++++|..+++++++++++|+||||+.+|+++|+++|+.++++..+..
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEEL 151 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhc
Confidence 9999999999999999999999999999999999999999999987654
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=148.94 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=85.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCC----chhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAA----TKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI 253 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~----~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~ 253 (320)
..+++++.++|+.|+++|++++++||. .......+++.+ |+..+ |+.++++++...+||++. .+++++++
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l-Gi~~~--f~~i~~~d~~~~~Kp~~~---~~l~~~~i 186 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF-HIPAM--NPVIFAGDKPGQYQYTKT---QWIQDKNI 186 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh-CCchh--eeEEECCCCCCCCCCCHH---HHHHhCCC
Confidence 457788999999999999999999998 455677777776 99988 899999888887888875 35567776
Q ss_pred CCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 254 SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 254 ~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
++||||+.+|+.+|+++|+.++.+.++.+.
T Consensus 187 ----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 187 ----RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred ----eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 799999999999999999999999877665
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-19 Score=148.72 Aligned_cols=135 Identities=19% Similarity=0.158 Sum_probs=95.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHH----------HHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI----------YVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~----------~~~~ 247 (320)
..++||+.++|+.|+++|++++|+||+....+..+++++..-..+...+..+.++.+...||+|.. ...+
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 589999999999999999999999999999999888875111223111445566666777887754 3578
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhhh
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
+++++..+++|+||||+.+|+.+|+.||+.++ .+ ...+... ..-.+.+.--++.|+.+.++++.+
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~--~l~~~~~--~~~~~~~~~~~f~ei~~~l~~~~~ 217 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RD--FLITKCE--ELGIPYTPFETFHDVQTELKHLLE 217 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HH--HHHHHHH--HcCCCccccCCHHHHHHHHHHHhc
Confidence 89999999999999999999999999999543 21 1111100 111233333456677777776654
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-19 Score=140.21 Aligned_cols=96 Identities=16% Similarity=0.226 Sum_probs=82.9
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchh------------hHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHH
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKS------------SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~------------~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~ 247 (320)
++||+.++|+.|++.|++++|+||+... .+...++++ |+. ++.++++++....||+|+++..+
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~-gl~----~~~ii~~~~~~~~KP~p~~~~~~ 117 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL-KVP----IQVLAATHAGLYRKPMTGMWEYL 117 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc-CCC----EEEEEecCCCCCCCCccHHHHHH
Confidence 7899999999999999999999998753 356677776 774 35666676666789999999999
Q ss_pred HHHcC--CCCCCEEEEecCH--------hhHHHHHHcCCeEEE
Q 020871 248 AKRLG--ISEKDCLVVEDSV--------IGLQAATRAGMACVI 280 (320)
Q Consensus 248 ~~~l~--~~~~~~v~VGD~~--------~Dv~~a~~aG~~~v~ 280 (320)
++++| +++++|+||||+. +|+++|+++|+.+++
T Consensus 118 ~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 118 QSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 99999 9999999999996 699999999999864
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-18 Score=141.67 Aligned_cols=129 Identities=15% Similarity=0.087 Sum_probs=90.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCC----CCCCCCCHHHHHHHHHHcCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGI 253 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~l~~ 253 (320)
..++||+.++|+.|+++ ++++++||+.....+..++++ |+..+ |+..+..++ ++..++.|.....+++.++.
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~-gl~~~--f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL-GWPTL--FCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc-CCchh--hcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 57899999999999999 999999999999999999997 98877 554433221 12223334455666777777
Q ss_pred CCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc-cccceecccccccChhHHHHHHHHhhh
Q 020871 254 SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 254 ~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
.+++|+||||+.+|+.+++++|+.+. ++... ... ..+.. ....++.+|.+++.+..+
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~---~~~~~~~~~----~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAGIL-FRPPA---NVIAEFPQF----PAVHTYDELLAAIDKASA 200 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCH---HHHHhCCcc----cccCCHHHHHHHHHHHHh
Confidence 78999999999999999999998653 33221 111 11221 123356677777776543
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.8e-19 Score=151.50 Aligned_cols=109 Identities=13% Similarity=0.203 Sum_probs=87.0
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHH-HHHHhhCCccccCcceEEe---CCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL-CLENLIGMERFEGLDCFLA---GDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~-~l~~~~~l~~~~~fd~v~~---~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
-|+++.++++.|++.|. ++++||.+...... .+.. +++..+ |+.+.. .+....+||+|++|..+++++|++|
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~--~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~ 219 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSL--VAAIETASGRQPLVVGKPSPYMFECITENFSIDP 219 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHH--HHHHHHHhCCceeccCCCCHHHHHHHHHHhCCCh
Confidence 47899999999999887 78999988643321 1222 355555 554432 3445678999999999999999999
Q ss_pred CCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc
Q 020871 256 KDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK 292 (320)
Q Consensus 256 ~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~ 292 (320)
++|+||||+. .|+.+|+++|+.+++|.+|....+.+.
T Consensus 220 ~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~ 257 (279)
T TIGR01452 220 ARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQ 257 (279)
T ss_pred hhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHH
Confidence 9999999996 899999999999999999988766654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=131.91 Aligned_cols=103 Identities=22% Similarity=0.314 Sum_probs=93.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCC------CCCCCCHHHHHHHHHHc
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV------KQKKPDPSIYVTAAKRL 251 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~------~~~KP~~~~~~~~~~~l 251 (320)
+++.+-.+++|-.|+.++ .+++||++..++.+.++.+ |+.+. |+.+++.+-. -..||.++.|+.+.+..
T Consensus 99 LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L-GieDc--Fegii~~e~~np~~~~~vcKP~~~afE~a~k~a 173 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL-GIEDC--FEGIICFETLNPIEKTVVCKPSEEAFEKAMKVA 173 (244)
T ss_pred cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh-ChHHh--ccceeEeeccCCCCCceeecCCHHHHHHHHHHh
Confidence 689999999999999975 8899999999999999998 99988 9999886433 35799999999999999
Q ss_pred CCC-CCCEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 252 GIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 252 ~~~-~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
|+. |.+++||+||.+++..|++.||.++++....
T Consensus 174 gi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 174 GIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CCCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence 997 9999999999999999999999999886654
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.1e-18 Score=134.14 Aligned_cols=101 Identities=22% Similarity=0.344 Sum_probs=84.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCc-hhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAAT-KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~-~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
.++||+.++|+.|++.|++++++||+. .......++.+ ++..+ .+..||+|++|..+++++++++++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~-gl~~~-----------~~~~KP~p~~~~~~l~~~~~~~~~ 110 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL-GIPVL-----------PHAVKPPGCAFRRAHPEMGLTSEQ 110 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc-CCEEE-----------cCCCCCChHHHHHHHHHcCCCHHH
Confidence 588999999999999999999999998 45455454543 55422 134699999999999999999999
Q ss_pred EEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 258 CLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 258 ~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
|+||||+. .|+++|+++|+.+|+++++....+.+
T Consensus 111 ~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~ 145 (170)
T TIGR01668 111 VAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF 145 (170)
T ss_pred EEEECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence 99999998 69999999999999999887665433
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.7e-18 Score=143.61 Aligned_cols=130 Identities=16% Similarity=0.167 Sum_probs=97.5
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCC---CCCCCHHHHHHHHHHcCCCCC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK---QKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~---~~KP~~~~~~~~~~~l~~~~~ 256 (320)
.|+++.+.++.|+..+++++++||.+........... |+..+ |+.+.++.... .+||+|++|..++++++++|+
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~-g~g~~--~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~ 197 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL-DVGPF--VTALEYATDTKATVVGKPSKTFFLEALRATGCEPE 197 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC-CchHH--HHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChh
Confidence 4789999999999999999999998877665455443 77777 77665543332 379999999999999999999
Q ss_pred CEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 257 DCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 257 ~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+|+||||+. +|+.+|+++|+.+++|.+|....++.+. ....|++..-++.+|.+++
T Consensus 198 ~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~-~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 198 EAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEK-INVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred hEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcc-cCCCCCEEECCHHHHHHHH
Confidence 999999996 8999999999999999888643322211 1123444444555665544
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.75 E-value=9e-17 Score=131.38 Aligned_cols=98 Identities=17% Similarity=0.150 Sum_probs=75.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc--eEE------eCCCCCCCCCCHHHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--CFL------AGDDVKQKKPDPSIYVTAAK 249 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd--~v~------~~~~~~~~KP~~~~~~~~~~ 249 (320)
++++||+.++|+.|++.+ +++|+|++....+..+++.+ |++.+ |. ..+ .+... ..+|.+..+...++
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l-gi~~~--~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l~ 141 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL-GFPTL--LCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAFK 141 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc-CCchh--hceeeEEecCCeeECeee-cCcchHHHHHHHHH
Confidence 479999999999999985 99999999999999999987 99877 44 222 22222 34555555555556
Q ss_pred HcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeC
Q 020871 250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 250 ~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~ 283 (320)
+.+. +|++|||+.||+.+++.||.++++...
T Consensus 142 ~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 142 SLYY---RVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred hhCC---CEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 6653 799999999999999999999876533
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=128.51 Aligned_cols=101 Identities=30% Similarity=0.484 Sum_probs=91.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCC----------------CCCH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK----------------KPDP 241 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~----------------KP~~ 241 (320)
..+++++.++|+.|+++|++++++||+....+...++.. ++..+ ++.+++++..... ||++
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~-~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL-GLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc-CCchh--hhheeccchhhhhcccccccccccccccCCCCH
Confidence 579999999999999999999999999999999999886 88766 7888877665544 9999
Q ss_pred HHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEE
Q 020871 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 242 ~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
..+..++++++..++++++|||+.+|+++++++|+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 100 DKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 9999999999999999999999999999999999998864
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=129.92 Aligned_cols=95 Identities=13% Similarity=0.092 Sum_probs=79.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCC--------------------CCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD--------------------VKQK 237 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~--------------------~~~~ 237 (320)
.+++||+.++|+.|++.|++++++||+....++..++++ ++..+ |+.+++++. ...+
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI-GEKDV--FIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc-CChhh--eeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence 489999999999999999999999999999899888886 89888 888886533 1233
Q ss_pred CCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeE
Q 020871 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 278 (320)
Q Consensus 238 KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~ 278 (320)
.++++.+..+.++. +++|+||||+.+|+.+|+.+++.+
T Consensus 148 ~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 148 CCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 34577888877664 789999999999999999997643
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.7e-17 Score=133.78 Aligned_cols=99 Identities=18% Similarity=0.166 Sum_probs=80.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc-cCcceEEeCCCCCCCCCCHHHH----------HH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF-EGLDCFLAGDDVKQKKPDPSIY----------VT 246 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~-~~fd~v~~~~~~~~~KP~~~~~----------~~ 246 (320)
..++||+.++|+.|+++|++++|+|++....++.+++.+ +.... ...+.++.++.+...||+|..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhh-CCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 589999999999999999999999999999888888876 43222 1114455556666677877665 47
Q ss_pred HHHHcCCCCCCEEEEecCHhhHHHHHHcCCe
Q 020871 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 247 ~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
++++++..+++|+||||+.+|+.+|+.||+.
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~ 178 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLC 178 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCee
Confidence 7788888889999999999999999999983
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.9e-17 Score=140.99 Aligned_cols=103 Identities=18% Similarity=0.285 Sum_probs=86.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCc---------------hhhHHHHHHHhhCCccccCcceEE-e----CCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFL-A----GDDVKQK 237 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~---------------~~~~~~~l~~~~~l~~~~~fd~v~-~----~~~~~~~ 237 (320)
..++||+.++|..|+++|++++|+||.+ .......++.. ++. |+.++ + +++...+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~-gl~----fd~i~i~~~~~sd~~~~r 103 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ-GIK----FDEVLICPHFPEDNCSCR 103 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc-CCc----eeeEEEeCCcCcccCCCC
Confidence 4799999999999999999999999952 33344455564 663 56554 3 3566788
Q ss_pred CCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 238 KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
||+|.++..++++++++|++++||||+.+|+++|+++|+.+|+++...
T Consensus 104 KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~ 151 (354)
T PRK05446 104 KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARET 151 (354)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCC
Confidence 999999999999999999999999999999999999999999996643
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.7e-17 Score=126.34 Aligned_cols=116 Identities=12% Similarity=0.123 Sum_probs=89.9
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
+|+.|+++|++++|+||.........++.+ |+..+ |+. .||+++.+..+++++|+++++|+||||+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~-gi~~~--~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~ 103 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL-GITHL--YQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLI 103 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc-CCCEE--Eec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 789999999999999999999899889887 88876 542 378899999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhhhc
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAA 319 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 319 (320)
|+.+++.+|+. +.+.+... .....++++.+.-... .-|.+++++++.+
T Consensus 104 D~~~~~~ag~~-~~v~~~~~--~~~~~a~~i~~~~~~~--g~~~~~~~~~~~~ 151 (154)
T TIGR01670 104 DWPVMEKVGLS-VAVADAHP--LLIPRADYVTRIAGGR--GAVREVCELLLLA 151 (154)
T ss_pred HHHHHHHCCCe-EecCCcCH--HHHHhCCEEecCCCCC--cHHHHHHHHHHHh
Confidence 99999999998 55544432 2223455555433221 1266777776654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.2e-17 Score=123.67 Aligned_cols=88 Identities=17% Similarity=0.147 Sum_probs=76.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCC-chhhHHHHHHHhhC-------CccccCcceEEeCCCCCCCCCCHHHHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAA-TKSSVILCLENLIG-------MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR 250 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~-~~~~~~~~l~~~~~-------l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~ 250 (320)
.++||+.++|+.|+++|++++++||+ ........++.. + +..+ |+.++++++ +|+|+.|..++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~-~~~~~i~~l~~~--f~~~~~~~~----~pkp~~~~~a~~~ 101 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIF-EDFGIIFPLAEY--FDPLTIGYW----LPKSPRLVEIALK 101 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhc-cccccchhhHhh--hhhhhhcCC----CcHHHHHHHHHHH
Confidence 48899999999999999999999999 777777777775 6 7777 888887754 5888999999999
Q ss_pred cC--CCCCCEEEEecCHhhHHHHHH
Q 020871 251 LG--ISEKDCLVVEDSVIGLQAATR 273 (320)
Q Consensus 251 l~--~~~~~~v~VGD~~~Dv~~a~~ 273 (320)
+| +.|++|+||||+..|++..++
T Consensus 102 lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 102 LNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred hcCCCCcceEEEECCCHhHHHHHHh
Confidence 99 999999999999999887654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=9e-16 Score=126.04 Aligned_cols=100 Identities=27% Similarity=0.295 Sum_probs=84.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCC-------C---CCCCCCHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD-------V---KQKKPDPSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~-------~---~~~KP~~~~~~~~ 247 (320)
..++||+.++++.|++.|++++|+|++....+..+.+.+ |++.. +...+..++ . -.++-+......+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l-g~d~~--~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~ 152 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL-GIDYV--VANELEIDDGKLTGRVVGPICDGEGKAKALREL 152 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh-CCchh--eeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence 589999999999999999999999999999999999887 99877 555444443 1 1223456778899
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
++.+|++++++++|||+.||+.|...+|.+.+.
T Consensus 153 ~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 153 AAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred HHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 999999999999999999999999999999654
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.4e-16 Score=129.89 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=79.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCc----hhhHHHHHHHhhCC--ccccCcceEEeCCCCCCCCCCHHHHHHHHHHc
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT----KSSVILCLENLIGM--ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL 251 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~----~~~~~~~l~~~~~l--~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l 251 (320)
..++||+.++|+.|+++|++++++||.. ......+++.+ |+ ..+ |+.++++++. .||++.. .++++
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~-gip~~~~--f~vil~gd~~--~K~~K~~---~l~~~ 184 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF-HIPADNM--NPVIFAGDKP--GQYTKTQ---WLKKK 184 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc-CCCcccc--eeEEEcCCCC--CCCCHHH---HHHhc
Confidence 5799999999999999999999999964 33455555555 88 777 8888887753 6777653 55667
Q ss_pred CCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 252 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 252 ~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
++ ++||||+.+|+.+|++||+.++.+.++...
T Consensus 185 ~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 185 NI----RIFYGDSDNDITAAREAGARGIRILRAANS 216 (237)
T ss_pred CC----eEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence 76 899999999999999999999999887664
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-16 Score=140.15 Aligned_cols=105 Identities=21% Similarity=0.201 Sum_probs=95.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc-ccCcceEEeCC-------CCCCCCCCHHHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLAGD-------DVKQKKPDPSIYVTAAK 249 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~-~~~fd~v~~~~-------~~~~~KP~~~~~~~~~~ 249 (320)
..++||+.++|+.|++.|++++++||.........++.+ ++.. + |+.+++.+ +....||+|+.+..+++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l-~~~~~~--f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~ 262 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL-RQTDIW--FDDLIGRPPDMHFQREQGDKRPDDVVKEEIFW 262 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH-HHcCCc--hhhhhCCcchhhhcccCCCCCCcHHHHHHHHH
Confidence 478999999999999999999999999999998899887 7775 7 88888887 45578999999999999
Q ss_pred HcCC-CCCCEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 250 RLGI-SEKDCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 250 ~l~~-~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
+++. .+++|+||||+.+|+++|+++|+.+++|.+|.
T Consensus 263 ~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 263 EKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred HHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 9988 67999999999999999999999999997763
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=123.03 Aligned_cols=94 Identities=24% Similarity=0.220 Sum_probs=76.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCC------------CCCCCCCHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD------------VKQKKPDPSIYV 245 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~------------~~~~KP~~~~~~ 245 (320)
+.++||+.++++.++++|++++|+|++....++..++.+ |+..+ |...+..++ ...+..++..+.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~-g~~~~--~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL-GIDDV--FANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCchh--eeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 568999999999999999999999999999999999887 88876 443333221 122344567888
Q ss_pred HHHHHcCCCCCCEEEEecCHhhHHHHHHc
Q 020871 246 TAAKRLGISEKDCLVVEDSVIGLQAATRA 274 (320)
Q Consensus 246 ~~~~~l~~~~~~~v~VGD~~~Dv~~a~~a 274 (320)
.+++++++++++|++|||+.+|+.+++.|
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 88889999999999999999999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-16 Score=134.26 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=79.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHH--HHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL--CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~--~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
..|+.....+..|+ .|.+ .++||.+...... ..-....+... ++...+.+.+..+||+|++|..++++++++++
T Consensus 121 ~~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~--i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~ 196 (249)
T TIGR01457 121 IDYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITV--LEVATGVKPVYIGKPNAIIMEKAVEHLGTERE 196 (249)
T ss_pred CCHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHH--HHHHhCCCccccCCChHHHHHHHHHHcCCCcc
Confidence 35566666777774 4666 7888887654321 00000011122 34444556677789999999999999999999
Q ss_pred CEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 257 DCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 257 ~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
+|+||||+. +|+.+|+++|+.+++|.+|....+.+
T Consensus 197 ~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~ 232 (249)
T TIGR01457 197 ETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEV 232 (249)
T ss_pred cEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHH
Confidence 999999997 79999999999999999988765554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.3e-16 Score=118.00 Aligned_cols=94 Identities=27% Similarity=0.393 Sum_probs=82.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
..-|++.+.+.+++++|+++.|+||++..-+....+.+ |+.. +. ...||-+..|..+++++++++++|
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l-~v~f------i~-----~A~KP~~~~fr~Al~~m~l~~~~v 113 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-GVPF------IY-----RAKKPFGRAFRRALKEMNLPPEEV 113 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc-CCce------ee-----cccCccHHHHHHHHHHcCCChhHE
Confidence 46678888888999999999999999998888888776 6643 32 458999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEeCC
Q 020871 259 LVVEDSV-IGLQAATRAGMACVITYTS 284 (320)
Q Consensus 259 v~VGD~~-~Dv~~a~~aG~~~v~v~~~ 284 (320)
+||||.. .|+.+++.+|+.+|+|..=
T Consensus 114 vmVGDqL~TDVlggnr~G~~tIlV~Pl 140 (175)
T COG2179 114 VMVGDQLFTDVLGGNRAGMRTILVEPL 140 (175)
T ss_pred EEEcchhhhhhhcccccCcEEEEEEEe
Confidence 9999999 7999999999999998553
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-15 Score=124.27 Aligned_cols=100 Identities=19% Similarity=0.181 Sum_probs=82.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcce-EE-------eCC---CCCCCCCCHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC-FL-------AGD---DVKQKKPDPSIYVTA 247 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~-v~-------~~~---~~~~~KP~~~~~~~~ 247 (320)
.++||+.++++.+++.|++++|+|++....++..++.+ |++.+ |.. +. .+. ....++++...+..+
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l-g~~~~--~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~ 163 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL-GIDNA--IGTRLEESEDGIYTGNIDGNNCKGEGKVHALAEL 163 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCcce--EecceEEcCCCEEeCCccCCCCCChHHHHHHHHH
Confidence 68999999999999999999999999999999888886 88877 433 11 221 112345667778999
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEE
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
+++.++++++|++|||+.+|+.+++.+|..++..
T Consensus 164 ~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 164 LAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 9999999999999999999999999999987543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-16 Score=136.85 Aligned_cols=126 Identities=13% Similarity=0.167 Sum_probs=89.6
Q ss_pred HHHHHHHHCCCcEEEEeCCchhh-HHHHHHHhhCCccccCcceEEeCCCCC---CCCCCHHHHHHHHHHcCCCCCCEEEE
Q 020871 186 RLMDEAKAAGKKVAVCSAATKSS-VILCLENLIGMERFEGLDCFLAGDDVK---QKKPDPSIYVTAAKRLGISEKDCLVV 261 (320)
Q Consensus 186 ~~l~~L~~~g~~i~i~Tn~~~~~-~~~~l~~~~~l~~~~~fd~v~~~~~~~---~~KP~~~~~~~~~~~l~~~~~~~v~V 261 (320)
.....|+.++-.++++||.+... ....+.. +|+..+ |+.+..+.... .+||+|.+|..+++++++++++|+||
T Consensus 177 ~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~-~g~g~~--~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~V 253 (311)
T PLN02645 177 YATLCIRENPGCLFIATNRDAVTHLTDAQEW-AGAGSM--VGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMV 253 (311)
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCCCCCCCc-cchHHH--HHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEE
Confidence 34445554333588899988743 2222223 377777 77666654432 36999999999999999999999999
Q ss_pred ecCH-hhHHHHHHcCCeEEEEeCCCCchhhcccc-ceecccccccChhHHHHHHH
Q 020871 262 EDSV-IGLQAATRAGMACVITYTSSTAEQDFKDA-IAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 262 GD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~~l~ 314 (320)
||+. +|+.+|+++|+.+++|.+|....+++... ....|++..-++.+|.++++
T Consensus 254 GD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 254 GDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred cCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 9998 89999999999999999888776655321 22346666666777766554
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=126.77 Aligned_cols=90 Identities=29% Similarity=0.397 Sum_probs=78.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.|++++++|+.+........+.+ |+... .+++. .. +||++.+|..+++.+++++++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l-gi~~~----~v~a~-~~--~kP~~k~~~~~i~~l~~~~~~ 197 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL-GIFDS----IVFAR-VI--GKPEPKIFLRIIKELQVKPGE 197 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT-TSCSE----EEEES-HE--TTTHHHHHHHHHHHHTCTGGG
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccc-ccccc----ccccc-cc--ccccchhHHHHHHHHhcCCCE
Confidence 367899999999999999999999999999888888887 88541 12222 11 799999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcC
Q 020871 258 CLVVEDSVIGLQAATRAG 275 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG 275 (320)
|+||||+.||+.|+++||
T Consensus 198 v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 198 VAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEEESSGGHHHHHHHSS
T ss_pred EEEEccCHHHHHHHHhCc
Confidence 999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=130.51 Aligned_cols=235 Identities=11% Similarity=0.121 Sum_probs=128.2
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHH---hcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcC----
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFS---HFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHG---- 137 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---- 137 (320)
|++|+|+||+||||++..+.+.+...+++. +.|+.....++|++.....+.+.+ +... .+...+|
T Consensus 1 M~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l----~~~~----~~I~~NGa~i~ 72 (272)
T PRK10530 1 MTYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL----ALDT----PAICCNGTYLY 72 (272)
T ss_pred CCccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc----CCCC----CEEEcCCcEEE
Confidence 358999999999999887655555555554 458888887777765443333322 1110 0011111
Q ss_pred -CCCccccCCCCCCchhHHHHHHHHHHHHH----------------HHHHHH------HHhCCCCCChhHHHHHHHHHHC
Q 020871 138 -WPSSTIFDNPPVTDDDQAKLIDLIQDWKT----------------ERYQQI------IKSGTVEPRPGVLRLMDEAKAA 194 (320)
Q Consensus 138 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------~~~~~~------~~~~~~~~~~g~~~~l~~L~~~ 194 (320)
....+++...+++.+...++.+.+.+... ..+... ........++++.+++..++..
T Consensus 73 d~~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (272)
T PRK10530 73 DYQAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQV 152 (272)
T ss_pred ecCCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhc
Confidence 01112333344444444444444322100 000000 0000112356777777777777
Q ss_pred CCcEEEEeCCch-hhHHHHHHHh---hCCcccc-CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHH
Q 020871 195 GKKVAVCSAATK-SSVILCLENL---IGMERFE-GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQ 269 (320)
Q Consensus 195 g~~i~i~Tn~~~-~~~~~~l~~~---~~l~~~~-~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~ 269 (320)
+..+.++++... .......+.+ .++.... .++. + +-+..+..++..+..+++++|+++++|++|||+.||++
T Consensus 153 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~--ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~ 229 (272)
T PRK10530 153 NAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQ-V--DIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDIS 229 (272)
T ss_pred CCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCce-E--EEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHH
Confidence 766666666442 1122222221 2332110 0111 1 12233445677999999999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHh
Q 020871 270 AATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 270 ~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
|++.+|+.+++- ++..+....+++++++..+ +.+...|+++
T Consensus 230 m~~~ag~~vamg---na~~~lk~~Ad~v~~~n~~---dGv~~~l~~~ 270 (272)
T PRK10530 230 MLEAAGLGVAMG---NADDAVKARADLVIGDNTT---PSIAEFIYSH 270 (272)
T ss_pred HHHhcCceEEec---CchHHHHHhCCEEEecCCC---CcHHHHHHHH
Confidence 999999876553 3333333567777766444 4455555554
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=6e-15 Score=123.91 Aligned_cols=80 Identities=26% Similarity=0.461 Sum_probs=67.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
-.+||.+.+|+.+++.++.++++|+||||+. +||.+|+++||.+++|.+|....+++... ...|++..-++.++...+
T Consensus 187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~-~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRA-EVKPTYVVDSLAELITAL 265 (269)
T ss_pred ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhh-ccCCcchHhhHHHHHhhh
Confidence 3579999999999999999999999999999 69999999999999999999977765544 456777776777776665
Q ss_pred HH
Q 020871 314 QN 315 (320)
Q Consensus 314 ~~ 315 (320)
..
T Consensus 266 ~~ 267 (269)
T COG0647 266 KE 267 (269)
T ss_pred hc
Confidence 54
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-15 Score=122.06 Aligned_cols=112 Identities=13% Similarity=0.164 Sum_probs=84.8
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
.++.|+++|++++++||.....+...++.+ |+..+ |+ + .+++++.+..+++++|+++++|+||||+.+
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l-gl~~~--f~----g-----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~ 123 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTL-GITHL--YQ----G-----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLI 123 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHc-CCcee--ec----C-----CCcHHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 556678899999999999999899999887 88776 54 1 356788999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecc-cccccChhHHHHHH
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYP-DLSNVRLKDLELLL 313 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~~l 313 (320)
|+.+++++|+.++ +.+ ........++++++ ...+-.+.+|.+++
T Consensus 124 D~~~a~~aG~~~~-v~~--~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 124 DWPVMEKVGLSVA-VAD--AHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHHHHHHCCCeEe-cCC--hhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 9999999999954 432 22222234566654 23333556666554
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.3e-16 Score=130.38 Aligned_cols=61 Identities=18% Similarity=0.352 Sum_probs=55.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc
Q 020871 232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK 292 (320)
Q Consensus 232 ~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~ 292 (320)
+....+||+|++|..+++++++++++|+||||+. +|+.+|+++|+.+++|.+|....+.+.
T Consensus 168 ~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~ 229 (248)
T PRK10444 168 KPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDID 229 (248)
T ss_pred CccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHh
Confidence 4455689999999999999999999999999997 799999999999999999988766664
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-15 Score=128.91 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=82.1
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceE--EeCCCCCCCCCCHHHHHHHHHHcCCC-CC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF--LAGDDVKQKKPDPSIYVTAAKRLGIS-EK 256 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v--~~~~~~~~~KP~~~~~~~~~~~l~~~-~~ 256 (320)
-++++.++++.|+++|+++ ++||.+.......+... +...+ |..+ .+.+....+||+|++|..++++++.. ++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~-~~g~~--~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~ 214 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY-GAGYY--AELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKN 214 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe-cccHH--HHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcc
Confidence 3789999999999899997 88999887665555553 77766 5544 45555668999999999999999975 57
Q ss_pred CEEEEecC-HhhHHHHHHcCCeEEEEe
Q 020871 257 DCLVVEDS-VIGLQAATRAGMACVITY 282 (320)
Q Consensus 257 ~~v~VGD~-~~Dv~~a~~aG~~~v~v~ 282 (320)
+|+||||+ .+|+.+|+++|+.+++|.
T Consensus 215 ~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 215 RMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred cEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 99999999 589999999999999985
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-13 Score=113.27 Aligned_cols=187 Identities=10% Similarity=-0.046 Sum_probs=107.5
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHH-HhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAF-SHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
..|+++||+||||++.+ ....+...+ .++|+.... ...+...+|.+........ ..+. ..++
T Consensus 5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~~~~~------------~~~~~~~ig~~l~~~~~~~-~~~~--~~~~ 67 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPLNLLL------------VLPLLPVIGLGLLVKGRAA-RWPM--SLLL 67 (211)
T ss_pred cceEEEEecCCCCcccc--hHHHHHHHHHHhcchhhHH------------HhHHHHHhccCcccchhhh-hhhH--HHHH
Confidence 46799999999999433 455666655 777754211 2334444554433211110 0000 0000
Q ss_pred C--CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHH-HHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 145 D--NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM-DEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 145 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l-~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
. ....+.+. .+.+.+.+.+.|... ..++||+.++| +.|++.|++++|+||+....++..++.+ ++..
T Consensus 68 ~~~~~g~~~~~----~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l-~~~~ 137 (211)
T PRK11590 68 WGCTFGHSEAR----LQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT-PWLP 137 (211)
T ss_pred HHHHcCCCHHH----HHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-cccc
Confidence 0 00111111 233333344444433 46799999999 5788899999999999999898888886 6422
Q ss_pred ccCcceEEeCC-C---CCC--CCC-CHHH-HHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeC
Q 020871 222 FEGLDCFLAGD-D---VKQ--KKP-DPSI-YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 222 ~~~fd~v~~~~-~---~~~--~KP-~~~~-~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~ 283 (320)
.+.+++.. + .+. +.+ ..+. ...+-+.++.+...+.+.|||.+|+.+...+|-+.+ ||.
T Consensus 138 ---~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~-vnp 203 (211)
T PRK11590 138 ---RVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWR-VTP 203 (211)
T ss_pred ---cCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEE-ECc
Confidence 13344432 1 110 000 0111 233334457777889999999999999999999964 443
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=4e-14 Score=109.63 Aligned_cols=195 Identities=17% Similarity=0.172 Sum_probs=118.3
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccc
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (320)
+..-++|+||+|.|++. .+.+.+++...|.. ++..+.-+..+++..+ +++.+.+.
T Consensus 13 ~~~~~aVcFDvDSTvi~-----eEgIdelA~~~G~~------------~~Va~~T~rAMng~~~-F~eaL~~R------- 67 (227)
T KOG1615|consen 13 WRSADAVCFDVDSTVIQ-----EEGIDELAAYCGVG------------EAVAEVTRRAMNGEAD-FQEALAAR------- 67 (227)
T ss_pred HHhcCeEEEecCcchhH-----HhhHHHHHHHhCch------------HHHHHHHHHHhCCCCc-HHHHHHHH-------
Confidence 45688999999999994 34455555556653 2223334445544433 33333221
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc--
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-- 221 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~-- 221 (320)
.. +.+-........+....+.+-||+.++...|+++|.+++++|++.+..+..+...+ ||+.
T Consensus 68 --------------l~-llqp~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L-gi~~~n 131 (227)
T KOG1615|consen 68 --------------LS-LLQPLQVQVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL-GIPKSN 131 (227)
T ss_pred --------------HH-HhcccHHHHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh-CCcHhh
Confidence 01 11111122222233456789999999999999999999999999999999988887 8875
Q ss_pred c------cCcceEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 222 F------EGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 222 ~------~~fd~v~~~~~----~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
. ++.+.-+.+.+ +..+--+++.+..+++ +.+-+.++||||+.+|+++... |...+.........+..
T Consensus 132 ~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~~~r~~vk 208 (227)
T KOG1615|consen 132 IYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGNVIREGVK 208 (227)
T ss_pred hhhheeeeccCCcccccccCCccccCCccHHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCceEcHhhH
Confidence 1 11222222322 1122344567777766 7777999999999999998877 43334433333233333
Q ss_pred cccceeccccc
Q 020871 292 KDAIAIYPDLS 302 (320)
Q Consensus 292 ~~~~~~~~~~~ 302 (320)
.++.+.+.+|.
T Consensus 209 ~nak~~~~~f~ 219 (227)
T KOG1615|consen 209 ANAKWYVTDFY 219 (227)
T ss_pred hccHHHHHHHH
Confidence 34555444443
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.2e-14 Score=125.11 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHH----hhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN----LIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~----~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
.+++|+.++|..|++.|++++|+|+++...+...+++ + ++..+ |+.+.++ .||+|+.+..+++++|+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~-~~~~~--f~~~~~~-----~~pk~~~i~~~~~~l~i~ 102 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI-LQAED--FDARSIN-----WGPKSESLRKIAKKLNLG 102 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc-CcHHH--eeEEEEe-----cCchHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999988 5 77777 7877555 689999999999999999
Q ss_pred CCCEEEEecCHhhHHHHHHcCCe
Q 020871 255 EKDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
+++++||||++.|+.++++++-.
T Consensus 103 ~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 103 TDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred cCcEEEECCCHHHHHHHHHHCCC
Confidence 99999999999999999997764
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-14 Score=113.39 Aligned_cols=95 Identities=21% Similarity=0.193 Sum_probs=86.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc-ccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~-~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
+.++||+.++|..|+ .+++++|+|++....++..++.+ ++.. + |+.+++++++...||+ |..+++++|.+|+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l-~~~~~~--f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~ 116 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL-DPKKYF--GYRRLFRDECVFVKGK---YVKDLSLLGRDLS 116 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh-CcCCCE--eeeEEECccccccCCe---EeecHHHcCCChh
Confidence 578999999999999 57999999999999999999887 8754 5 6999999999999997 8999999999999
Q ss_pred CEEEEecCHhhHHHHHHcCCeEE
Q 020871 257 DCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
+|++|||+.+|+.++.++|+.+-
T Consensus 117 ~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 117 NVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred cEEEEECCHHHhhcCccCEEEec
Confidence 99999999999999999997753
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-14 Score=121.65 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=57.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
...+..++..+..+++++|++++++++|||+.||+.|++.+|+.+++-|. .++..+.++++.++..+ ..+.+.|
T Consensus 152 ~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na---~~~vk~~a~~v~~~n~~---~Gv~~~l 225 (230)
T PRK01158 152 KSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANA---DEELKEAADYVTEKSYG---EGVAEAI 225 (230)
T ss_pred eeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCc---cHHHHHhcceEecCCCc---ChHHHHH
Confidence 34566778899999999999999999999999999999999999776433 33334567777765443 3445555
Q ss_pred HHh
Q 020871 314 QNV 316 (320)
Q Consensus 314 ~~~ 316 (320)
+++
T Consensus 226 ~~~ 228 (230)
T PRK01158 226 EHL 228 (230)
T ss_pred HHH
Confidence 543
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.1e-13 Score=106.31 Aligned_cols=105 Identities=27% Similarity=0.402 Sum_probs=84.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCc---------------hhhHHHHHHHhhCCccccCcceEEeCC-----CCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLAGD-----DVKQK 237 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~---------------~~~~~~~l~~~~~l~~~~~fd~v~~~~-----~~~~~ 237 (320)
+.+.||+.+.+..|++.|++++++||.+ ...+...++.. |+. ||.++..- ...++
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~-gv~----id~i~~Cph~p~~~c~cR 104 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ-GVK----IDGILYCPHHPEDNCDCR 104 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc-CCc----cceEEECCCCCCCCCccc
Confidence 3689999999999999999999999953 22233344443 442 56666542 25688
Q ss_pred CCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 238 KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
||++-++..+++++++++++.++|||...|+++|.++|+..+.+.++...
T Consensus 105 KP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~ 154 (181)
T COG0241 105 KPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGV 154 (181)
T ss_pred CCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCccc
Confidence 99999999999999999999999999999999999999998777665443
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=109.25 Aligned_cols=112 Identities=18% Similarity=0.238 Sum_probs=87.5
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
-+..|++.|++++|+||.........++.+ |+..+ |+. .||+|+.+..+++++++++++|++|||+.+
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l-gi~~~--f~~---------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~n 109 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEEL-KIKRF--HEG---------IKKKTEPYAQMLEEMNISDAEVCYVGDDLV 109 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHC-CCcEE--Eec---------CCCCHHHHHHHHHHcCcCHHHEEEECCCHH
Confidence 456788999999999999999999999997 99887 653 278999999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc-ChhHHHHHH
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV-RLKDLELLL 313 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~-~~~~l~~~l 313 (320)
|+.+++.+|+..++-+.. ......+.++...-... .+.++.+.+
T Consensus 110 Di~~~~~ag~~~am~nA~---~~lk~~A~~I~~~~~~~g~v~e~~e~i 154 (169)
T TIGR02726 110 DLSMMKRVGLAVAVGDAV---ADVKEAAAYVTTARGGHGAVREVAELI 154 (169)
T ss_pred HHHHHHHCCCeEECcCch---HHHHHhCCEEcCCCCCCCHHHHHHHHH
Confidence 999999999998764433 23334566665543332 234444433
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.2e-14 Score=120.14 Aligned_cols=113 Identities=15% Similarity=0.092 Sum_probs=71.0
Q ss_pred EEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCe
Q 020871 198 VAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 198 i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
..+.+....+.....++.+ +.... .+......+-+..+.++...+.++++++|++++++++|||+.||+.|++.+|+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~ 187 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKEL-GLNLV-AVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFG 187 (225)
T ss_pred EEEeecCCHHHHHHHHHhc-CceEE-EecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCce
Confidence 3444444555555555554 43211 000001112345567788899999999999999999999999999999999999
Q ss_pred EEEEeCCCCchhhccccceecccccccC-hhHHHHHHHH
Q 020871 278 CVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQN 315 (320)
Q Consensus 278 ~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~l~~ 315 (320)
+++-| ..++....++++.++..+.- -..+..+|++
T Consensus 188 vam~N---a~~~~k~~A~~vt~~~~~~G~~~~v~~~l~~ 223 (225)
T TIGR01482 188 VAVAN---AQPELKEWADYVTESPYGEGGAEAIGEILQA 223 (225)
T ss_pred EEcCC---hhHHHHHhcCeecCCCCCCcHHHHHHHHHHh
Confidence 77743 34444456777776544433 1114455544
|
catalyze the same reaction as SPP. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-12 Score=118.48 Aligned_cols=100 Identities=21% Similarity=0.271 Sum_probs=81.9
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
..+++||+.+++++++++|++++++|++.+...+..++++ |+ ||.++++++....||+++. ..+.+.++ .+
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l-Gl-----Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~ 140 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL-GL-----FDGVFASDGTTNLKGAAKA-AALVEAFG--ER 140 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CC-----CCEEEeCCCccccCCchHH-HHHHHHhC--cc
Confidence 3468899999999999999999999999999999888886 65 6899999988778777654 33445665 35
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
+++|+||+.+|+.+++.+|-. +.|+.+..
T Consensus 141 ~~~yvGDS~~Dlp~~~~A~~a-v~Vn~~~~ 169 (479)
T PRK08238 141 GFDYAGNSAADLPVWAAARRA-IVVGASPG 169 (479)
T ss_pred CeeEecCCHHHHHHHHhCCCe-EEECCCHH
Confidence 699999999999999999954 56766544
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-13 Score=125.69 Aligned_cols=92 Identities=21% Similarity=0.302 Sum_probs=78.6
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCch------------hhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHH
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATK------------SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~------------~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~ 247 (320)
++||+.+.|+.|++.|++++|+||... ..+..+++.+ |+. |+.+++.++...+||+|.++..+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l-gip----fdviia~~~~~~RKP~pGm~~~a 272 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL-GVP----FQVFIAIGAGFYRKPLTGMWDHL 272 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc-CCc----eEEEEeCCCCCCCCCCHHHHHHH
Confidence 689999999999999999999999766 3456667775 764 68888888778899999999999
Q ss_pred HHHcC----CCCCCEEEEecCHhhHHHHHHcCC
Q 020871 248 AKRLG----ISEKDCLVVEDSVIGLQAATRAGM 276 (320)
Q Consensus 248 ~~~l~----~~~~~~v~VGD~~~Dv~~a~~aG~ 276 (320)
+++++ +++++++||||...|+++++++|.
T Consensus 273 ~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 273 KEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 99985 899999999999988877766664
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.6e-13 Score=93.84 Aligned_cols=68 Identities=29% Similarity=0.503 Sum_probs=59.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecC-HhhHHHHHHcCCeEEEEeCCCCchhhcc----ccceecccccc
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSN 303 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~-~~Dv~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~ 303 (320)
.+||+|.+|..+++++++++++|+||||+ ..|+.+|+++|+.+++|.+|....+.+. .++++++++.+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 58999999999999999999999999999 6899999999999999999888766653 56666666544
|
... |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.2e-12 Score=107.86 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=83.6
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceE------EeCCCCCCCCCCH---
Q 020871 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF------LAGDDVKQKKPDP--- 241 (320)
Q Consensus 171 ~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v------~~~~~~~~~KP~~--- 241 (320)
..+....+.+.||+.++++.|+++|++++|+|++....++..++++ |+... +..+ +..+.+..++|.|
T Consensus 113 ~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l-gl~~~--~~~IvSN~L~f~~dGvltG~~~P~i~ 189 (277)
T TIGR01544 113 EIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA-GVYHP--NVKVVSNFMDFDEDGVLKGFKGPLIH 189 (277)
T ss_pred HHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc-CCCCc--CceEEeeeEEECCCCeEeCCCCCccc
Confidence 3333356799999999999999999999999999999999999987 87654 4555 4345555667777
Q ss_pred ------HHHHHHHHHcC--CCCCCEEEEecCHhhHHHHHHc
Q 020871 242 ------SIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRA 274 (320)
Q Consensus 242 ------~~~~~~~~~l~--~~~~~~v~VGD~~~Dv~~a~~a 274 (320)
..+..+++.++ ..+++||+|||+.+|+.||...
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 66777888888 8999999999999999998877
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.8e-13 Score=114.32 Aligned_cols=49 Identities=12% Similarity=0.047 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHHcCCCC-CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 239 PDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 239 P~~~~~~~~~~~l~~~~-~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
.+...+.++++++|+++ +++++|||+.||+.|++.+|..+++-|.....
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~ 239 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPN 239 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCC
Confidence 56668999999999999 99999999999999999999999886655443
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.7e-12 Score=109.75 Aligned_cols=78 Identities=12% Similarity=0.153 Sum_probs=60.5
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+..+-.+...+..+++++|++++++++|||+.||++|.+.+|..+++- ++.++..+.++++.++..+ ..+...|
T Consensus 191 ~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~---NA~~~vK~~A~~vt~~n~~---dGva~~i 264 (270)
T PRK10513 191 LDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG---NAIPSVKEVAQFVTKSNLE---DGVAFAI 264 (270)
T ss_pred eCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec---CccHHHHHhcCeeccCCCc---chHHHHH
Confidence 445667788999999999999999999999999999999999998774 3444555678888765443 4455555
Q ss_pred HHhh
Q 020871 314 QNVV 317 (320)
Q Consensus 314 ~~~~ 317 (320)
++++
T Consensus 265 ~~~~ 268 (270)
T PRK10513 265 EKYV 268 (270)
T ss_pred HHHh
Confidence 5543
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-12 Score=104.20 Aligned_cols=103 Identities=16% Similarity=0.168 Sum_probs=82.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhh---------------HHHHHHHhhCCccccCcceEEeCCC----------
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---------------VILCLENLIGMERFEGLDCFLAGDD---------- 233 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~---------------~~~~l~~~~~l~~~~~fd~v~~~~~---------- 233 (320)
.+.|+...++..|++.|++++|+|-++... +...++.- +.+.- .+.+++.+.
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s-~~~~~--i~~~~~yyp~~w~~p~~y~ 151 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKS-KCDFK--IKKVYAYYPKFWQEPSDYR 151 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhc-Cccce--eeeeeeeCCcccCChhhhh
Confidence 578899999999999999999999877643 44455542 33322 345555322
Q ss_pred -CCCCCCCHHH--H--HHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 234 -VKQKKPDPSI--Y--VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 234 -~~~~KP~~~~--~--~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
++..||+|++ | +.+++++|+.|++|+||+|+..++++|++.|+.++.+.++
T Consensus 152 ~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 152 PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 4677999999 9 9999999999999999999999999999999999998654
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.4e-11 Score=114.91 Aligned_cols=77 Identities=13% Similarity=0.067 Sum_probs=60.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+..+-.+..++..+++++|+++++++.|||+.||++|.+.+|..++|-| +..+..+.++++.++.. -+.+...|
T Consensus 502 ~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgN---A~eeVK~~Ad~VT~sNd---EDGVA~aL 575 (580)
T PLN02887 502 VPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSN---GAEKTKAVADVIGVSND---EDGVADAI 575 (580)
T ss_pred ecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCC---CCHHHHHhCCEEeCCCC---cCHHHHHH
Confidence 3456677889999999999999999999999999999999999988743 44455567888876543 35566666
Q ss_pred HHh
Q 020871 314 QNV 316 (320)
Q Consensus 314 ~~~ 316 (320)
+++
T Consensus 576 ek~ 578 (580)
T PLN02887 576 YRY 578 (580)
T ss_pred HHh
Confidence 654
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.3e-11 Score=92.54 Aligned_cols=106 Identities=19% Similarity=0.284 Sum_probs=84.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
..+||++.+.|++-++.|++++|.|.++.........+. ..+..+ |+..+-- .-..|-....|..+++..|++|
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~l--fsGyfDt--tiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSL--FSGYFDT--TIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhh--hcceeec--cccccccchhHHHHHHhcCCCc
Confidence 468999999999999999999999999887554444332 234444 4444322 2335777889999999999999
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
.+++|+.|++..+.+|+.+|+.++++.+++..
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~ 209 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAVRPGNA 209 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeeecCCCC
Confidence 99999999999999999999999988776654
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=101.38 Aligned_cols=137 Identities=12% Similarity=0.096 Sum_probs=93.2
Q ss_pred CCCCChhHHHHHHHH--HHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC----CC-----------CCC-C
Q 020871 177 TVEPRPGVLRLMDEA--KAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD----DV-----------KQK-K 238 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L--~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----~~-----------~~~-K 238 (320)
.+++.||+.++++.+ +..|+.+.|+|+++.-.++.+|++. |+... |+.|++.- +- .+. -
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~-gl~~~--f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C 145 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH-GLRDC--FSEIFTNPACFDADGRLRVRPYHSHGCSLC 145 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC-CCccc--cceEEeCCceecCCceEEEeCccCCCCCcC
Confidence 368999999999999 4579999999999999999999997 99887 77777641 10 111 1
Q ss_pred C----CHHHHHHHHHH---cCCCCCCEEEEecCHhhHHHHHHcCCe-EEEEeCCCCchhhcccc-ce-ecccccccChhH
Q 020871 239 P----DPSIYVTAAKR---LGISEKDCLVVEDSVIGLQAATRAGMA-CVITYTSSTAEQDFKDA-IA-IYPDLSNVRLKD 308 (320)
Q Consensus 239 P----~~~~~~~~~~~---l~~~~~~~v~VGD~~~Dv~~a~~aG~~-~v~v~~~~~~~~~l~~~-~~-~~~~~~~~~~~~ 308 (320)
| +...+..+++. -|+..++++||||+.||+-.+.+.+-. .++...++...+.+... .. ...=+.-.+-.|
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~ 225 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEE 225 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHH
Confidence 1 23456666655 367789999999999999999998764 55655555444444321 11 111112224456
Q ss_pred HHHHHHHh
Q 020871 309 LELLLQNV 316 (320)
Q Consensus 309 l~~~l~~~ 316 (320)
+.+.|+++
T Consensus 226 i~~~l~~~ 233 (234)
T PF06888_consen 226 ILEILLQL 233 (234)
T ss_pred HHHHHHhh
Confidence 66666554
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2e-12 Score=107.72 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=68.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh-hHHHHHHcCCeEEEEeCCCCchhhcccc---ceecccccccChhHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKDA---IAIYPDLSNVRLKDL 309 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~-Dv~~a~~aG~~~v~v~~~~~~~~~l~~~---~~~~~~~~~~~~~~l 309 (320)
.-.+||.+.++..+.++++++|++|+||||+.+ ||..+++.|+++++|.+|....++.... ..++|||..-.+.++
T Consensus 220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 346899999999999999999999999999995 9999999999999999999887666443 456688877777666
Q ss_pred HHHHH
Q 020871 310 ELLLQ 314 (320)
Q Consensus 310 ~~~l~ 314 (320)
...++
T Consensus 300 ~~~~~ 304 (306)
T KOG2882|consen 300 LPLLN 304 (306)
T ss_pred hhhcc
Confidence 65554
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.7e-12 Score=106.67 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=64.3
Q ss_pred EEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCe
Q 020871 198 VAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 198 i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
+++.++.........++.. ++..+ ... ..-+-...+..+...++.+++++|++++++++|||+.||++|++.+|+.
T Consensus 110 ~~~~~~~~~~~~~~~l~~~-~~~~~--~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~ 185 (215)
T TIGR01487 110 VIMREGKDVDEVREIIKER-GLNLV--DSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFK 185 (215)
T ss_pred EEecCCccHHHHHHHHHhC-CeEEE--ecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCe
Confidence 3344555555555555553 54432 110 0111123455667799999999999999999999999999999999999
Q ss_pred EEEEeCCCCchhhccccceeccccc
Q 020871 278 CVITYTSSTAEQDFKDAIAIYPDLS 302 (320)
Q Consensus 278 ~v~v~~~~~~~~~l~~~~~~~~~~~ 302 (320)
+++-+. .++....++++.++..
T Consensus 186 vam~na---~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 186 VAVANA---DDQLKEIADYVTSNPY 207 (215)
T ss_pred EEcCCc---cHHHHHhCCEEcCCCC
Confidence 877543 3333445777766543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-12 Score=102.46 Aligned_cols=102 Identities=21% Similarity=0.336 Sum_probs=71.2
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeC-CchhhHHHHHHHhhCCc----------cccCcceEEeCCCCCCCCCCHHHHH
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSA-ATKSSVILCLENLIGME----------RFEGLDCFLAGDDVKQKKPDPSIYV 245 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn-~~~~~~~~~l~~~~~l~----------~~~~fd~v~~~~~~~~~KP~~~~~~ 245 (320)
.+.+||++.++|+.|+.+|++++++|- ...+.+..+|+.+ ++. .+ |+..-. ..+ .+..-|.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l-~i~~~~~~~~~~~~~--F~~~eI----~~g-sK~~Hf~ 114 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL-EIDDADGDGVPLIEY--FDYLEI----YPG-SKTTHFR 114 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT-T-C----------CC--ECEEEE----SSS--HHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc-CCCccccccccchhh--cchhhe----ecC-chHHHHH
Confidence 368999999999999999999999994 4566778888886 888 66 554322 222 6677899
Q ss_pred HHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 246 ~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
.+.+..|++.++++||+|...+++.....|+.++.+.+|-.
T Consensus 115 ~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 115 RIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp HHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred HHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 99999999999999999999999999999999999988543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.4e-12 Score=108.31 Aligned_cols=78 Identities=13% Similarity=0.154 Sum_probs=58.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccce--ecccccccChhHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLKDLEL 311 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~ 311 (320)
+..+-.+...++.+++++|+++++++.|||+.||++|.+.+|...++-| +.++....+++ ++++. .-+.+..
T Consensus 183 ~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N---a~~~vK~~A~~~~v~~~n---~edGva~ 256 (272)
T PRK15126 183 LPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGN---AMPQLRAELPHLPVIGHC---RNQAVSH 256 (272)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccC---ChHHHHHhCCCCeecCCC---cchHHHH
Confidence 3455567889999999999999999999999999999999999887743 33344445553 55542 3456666
Q ss_pred HHHHhh
Q 020871 312 LLQNVV 317 (320)
Q Consensus 312 ~l~~~~ 317 (320)
.|++++
T Consensus 257 ~l~~~~ 262 (272)
T PRK15126 257 YLTHWL 262 (272)
T ss_pred HHHHHh
Confidence 776655
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.4e-11 Score=104.44 Aligned_cols=78 Identities=17% Similarity=0.205 Sum_probs=58.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccc--eecccccccChhHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAI--AIYPDLSNVRLKDLEL 311 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~ 311 (320)
+..+-.+..+++.+++++|++++++++|||+.||++|.+.+|..+++-|. .++..+.++ +++++. .-+.+..
T Consensus 185 ~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA---~~~vK~~A~~~~v~~~n---~edGVa~ 258 (266)
T PRK10976 185 MAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNA---HQRLKDLLPELEVIGSN---ADDAVPH 258 (266)
T ss_pred EcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCC---cHHHHHhCCCCeecccC---chHHHHH
Confidence 34555668899999999999999999999999999999999999877433 333334444 565543 3355666
Q ss_pred HHHHhh
Q 020871 312 LLQNVV 317 (320)
Q Consensus 312 ~l~~~~ 317 (320)
.|++++
T Consensus 259 ~l~~~~ 264 (266)
T PRK10976 259 YLRKLY 264 (266)
T ss_pred HHHHHh
Confidence 666654
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.9e-11 Score=103.82 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=57.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+..+..+......+++++|+++++++.|||+.||++|.+.+|..+++-|. .++....++.+..+.. -+.+...|
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na---~~~~k~~A~~vt~~n~---~~Gv~~~l 257 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA---DEELKELADYVTTSND---EDGVAEAL 257 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC---CHHHHhhCCcccCCcc---chHHHHHH
Confidence 35667778899999999999999999999999999999999999887444 3333345554434433 34555555
Q ss_pred HHhh
Q 020871 314 QNVV 317 (320)
Q Consensus 314 ~~~~ 317 (320)
++++
T Consensus 258 ~~~~ 261 (264)
T COG0561 258 EKLL 261 (264)
T ss_pred HHHh
Confidence 5543
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.2e-12 Score=107.53 Aligned_cols=50 Identities=26% Similarity=0.407 Sum_probs=46.1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCE-EEEecCH-hhHHHHHHcCCeEEEEeCC
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDC-LVVEDSV-IGLQAATRAGMACVITYTS 284 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~-v~VGD~~-~Dv~~a~~aG~~~v~v~~~ 284 (320)
..+||+|.+|..++++++++++++ +||||+. +|+.+|+++|+.+++|.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 467999999999999999998887 9999999 7999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.1e-11 Score=94.22 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=67.6
Q ss_pred CCChhHHHHHHHHHHCCC--cEEEEeCCc-------hhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGK--KVAVCSAAT-------KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAK 249 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~--~i~i~Tn~~-------~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~ 249 (320)
.+.|.+.+.++++++.+. ++.|+||+. ...++..-+.+ |+.-+ . ....|| ..+..+++
T Consensus 59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l-gIpvl---~-------h~~kKP--~~~~~i~~ 125 (168)
T PF09419_consen 59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL-GIPVL---R-------HRAKKP--GCFREILK 125 (168)
T ss_pred cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh-CCcEE---E-------eCCCCC--ccHHHHHH
Confidence 456666677777777765 499999984 44444444444 66532 1 124577 46667777
Q ss_pred HcCC-----CCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCC
Q 020871 250 RLGI-----SEKDCLVVEDSV-IGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 250 ~l~~-----~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~ 285 (320)
.++. .|+++++|||.. .|+.+|...|+.+||+..|.
T Consensus 126 ~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 126 YFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 7754 499999999999 79999999999999998764
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.7e-10 Score=101.56 Aligned_cols=54 Identities=20% Similarity=0.156 Sum_probs=46.6
Q ss_pred CCCCCCHHHHHHHHHHc--------CC-----CCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCch
Q 020871 235 KQKKPDPSIYVTAAKRL--------GI-----SEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAE 288 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l--------~~-----~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~ 288 (320)
..+||++.+|+.+++.+ ++ ++++++||||++ .|+.+|+++||.+++|.+|....
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~ 297 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNG 297 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCC
Confidence 45999999999998887 43 447999999999 79999999999999999885544
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.5e-10 Score=97.35 Aligned_cols=82 Identities=7% Similarity=-0.079 Sum_probs=58.9
Q ss_pred CCCCCCCHHHHHHHHHHcCC---CCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc----cccceecccccccCh
Q 020871 234 VKQKKPDPSIYVTAAKRLGI---SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNVRL 306 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~---~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l----~~~~~~~~~~~~~~~ 306 (320)
+..+-.+...++.+++++|+ ++++++.|||+.||++|.+.+|..++|-+.... .+.+ ..++++... ...
T Consensus 182 ~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~-~~~l~~~~~~~~~~~~~---~~~ 257 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNRE-GVHLQDDDPARVYRTQR---EGP 257 (271)
T ss_pred ecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCC-CcccccccCCceEeccC---CCc
Confidence 44566778899999999999 999999999999999999999999887643311 1112 234444433 344
Q ss_pred hHHHHHHHHhhhc
Q 020871 307 KDLELLLQNVVAA 319 (320)
Q Consensus 307 ~~l~~~l~~~~~~ 319 (320)
+.+.+.++.++.+
T Consensus 258 ~g~~~~l~~~~~~ 270 (271)
T PRK03669 258 EGWREGLDHFFSA 270 (271)
T ss_pred HHHHHHHHHHHhc
Confidence 5677777766654
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.4e-10 Score=94.97 Aligned_cols=87 Identities=20% Similarity=0.313 Sum_probs=65.4
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhh---HHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG 252 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~---~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~ 252 (320)
....++||+.++|+.|+++|++++++||..... ....++.. |+... .++.++...+ .++++.-...+.+.++
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~-Gi~~~-~~d~lllr~~---~~~K~~rr~~I~~~y~ 189 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF-GFPQA-DEEHLLLKKD---KSSKESRRQKVQKDYE 189 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc-CcCCC-CcceEEeCCC---CCCcHHHHHHHHhcCC
Confidence 345799999999999999999999999987443 33566665 88653 1466665543 2456677788877777
Q ss_pred CCCCCEEEEecCHhhHHHH
Q 020871 253 ISEKDCLVVEDSVIGLQAA 271 (320)
Q Consensus 253 ~~~~~~v~VGD~~~Dv~~a 271 (320)
+ +++|||+.+|+...
T Consensus 190 I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 190 I----VLLFGDNLLDFDDF 204 (266)
T ss_pred E----EEEECCCHHHhhhh
Confidence 6 89999999999664
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.2e-10 Score=96.41 Aligned_cols=52 Identities=15% Similarity=0.095 Sum_probs=44.2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 233 ~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
-+..+.++...+..+++++|+++++|++|||+.||+.|++.+|..++.+.+.
T Consensus 161 i~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 161 ILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 3567789999999999999999999999999999999999966555555443
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.9e-10 Score=94.17 Aligned_cols=41 Identities=15% Similarity=-0.013 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEE
Q 020871 239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 239 P~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
.++..+..+++++|+++++|++|||+.||+.|.+.+|..++
T Consensus 179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 35558999999999999999999999999999999998865
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.3e-11 Score=99.32 Aligned_cols=62 Identities=18% Similarity=0.350 Sum_probs=56.8
Q ss_pred CCC-hhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHH
Q 020871 179 EPR-PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243 (320)
Q Consensus 179 ~~~-~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~ 243 (320)
++. ||+.++|.+|+++|++++|+|++.+..+...++.+ |+..+ |+.+++++++...||+++.
T Consensus 145 ~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l-GLd~Y--FdvIIs~Gdv~~~kp~~e~ 207 (301)
T TIGR01684 145 RIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV-KLDRY--FDIIISGGHKAEEYSTMST 207 (301)
T ss_pred ccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc-CCCcc--cCEEEECCccccCCCCccc
Confidence 344 99999999999999999999999999999999997 99999 9999999999999998864
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-09 Score=90.01 Aligned_cols=101 Identities=9% Similarity=-0.055 Sum_probs=68.7
Q ss_pred CCCChhHHHHHH-HHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC-CCCC-CC---CC---HHHHHHHH
Q 020871 178 VEPRPGVLRLMD-EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD-DVKQ-KK---PD---PSIYVTAA 248 (320)
Q Consensus 178 ~~~~~g~~~~l~-~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~-~~~~-~K---P~---~~~~~~~~ 248 (320)
..++||+.++|+ .+++.|++++|+||+....++.+.+.. ++... +.+++.. ++.. ++ |. .+=...+.
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~-~~~~~---~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~ 168 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS-NFIHR---LNLIASQIERGNGGWVLPLRCLGHEKVAQLE 168 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc-ccccc---CcEEEEEeEEeCCceEcCccCCChHHHHHHH
Confidence 368999999996 788899999999999999888888774 43221 2333332 1100 11 11 11122333
Q ss_pred HHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeC
Q 020871 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 249 ~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~ 283 (320)
+.++.+.+.+.+.|||.+|+.+...+|-+.+ ||.
T Consensus 169 ~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~-Vnp 202 (210)
T TIGR01545 169 QKIGSPLKLYSGYSDSKQDNPLLAFCEHRWR-VSK 202 (210)
T ss_pred HHhCCChhheEEecCCcccHHHHHhCCCcEE-ECc
Confidence 4456666788999999999999999999964 433
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.1e-10 Score=91.58 Aligned_cols=94 Identities=20% Similarity=0.322 Sum_probs=65.8
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCc---h-----------hhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHH
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAAT---K-----------SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~---~-----------~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~ 245 (320)
..|++.+.|+.|.+.|+.|+|+||.. . ..+..+++.+ ++. +..+++...-..+||.+-++.
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l-~ip----~~~~~a~~~d~~RKP~~GM~~ 104 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKEL-GIP----IQVYAAPHKDPCRKPNPGMWE 104 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHC-TS-----EEEEECGCSSTTSTTSSHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHc-CCc----eEEEecCCCCCCCCCchhHHH
Confidence 45689999999999999999999873 1 1222333343 443 233444344478999999999
Q ss_pred HHHHHcCC----CCCCEEEEecC-----------HhhHHHHHHcCCeE
Q 020871 246 TAAKRLGI----SEKDCLVVEDS-----------VIGLQAATRAGMAC 278 (320)
Q Consensus 246 ~~~~~l~~----~~~~~v~VGD~-----------~~Dv~~a~~aG~~~ 278 (320)
.+++.++. +.++++||||. ..|.+.|.++|+..
T Consensus 105 ~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 105 FALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp HHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred HHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 99999874 88999999996 57999999999975
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-09 Score=93.10 Aligned_cols=67 Identities=18% Similarity=0.143 Sum_probs=52.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
+..+-.+...++.+++.+|++++++++|||+.||+.|++.+|+.+++.+ ........++++.++..+
T Consensus 183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~n---a~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 183 TAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGN---ADEELKALADYVTDSNNE 249 (256)
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecC---chHHHHHhCCEEecCCCC
Confidence 3455667889999999999999999999999999999999999977742 333334457777765443
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.8e-10 Score=97.78 Aligned_cols=104 Identities=15% Similarity=0.159 Sum_probs=85.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhC-------CccccCcceEEeCCCC----------------
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG-------MERFEGLDCFLAGDDV---------------- 234 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~-------l~~~~~fd~v~~~~~~---------------- 234 (320)
+..+||+.++|+.|+++|++++|+||+....++..++.++| +..+ ||.++++..-
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y--FD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY--FDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh--CcEEEeCCCCCcccCCCCceEEEeCC
Confidence 56799999999999999999999999999999999998646 8888 9988886431
Q ss_pred -CCCCCCH------------HHHHHHHHHcCCCCCCEEEEecCH-hhHHHHH-HcCCeEEEEeC
Q 020871 235 -KQKKPDP------------SIYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYT 283 (320)
Q Consensus 235 -~~~KP~~------------~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~-~aG~~~v~v~~ 283 (320)
+..++.. -....+.+.+|+.+++|+||||+. .|+.+++ .+||.+++|..
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 1111111 125677888999999999999999 6999998 89999999855
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.14 E-value=4e-10 Score=95.01 Aligned_cols=48 Identities=15% Similarity=0.087 Sum_probs=43.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 233 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 233 ~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
-+..+++++..+..+++++|+++++|++|||+.||+.|++.+|...++
T Consensus 153 i~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 153 VLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 356678899999999999999999999999999999999999988765
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.8e-10 Score=90.90 Aligned_cols=85 Identities=18% Similarity=0.262 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCC----------C---CCHHHHHHH-
Q 020871 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK----------K---PDPSIYVTA- 247 (320)
Q Consensus 182 ~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~----------K---P~~~~~~~~- 247 (320)
|++.++|+.++++|++++|+|++....++.+++.+ |+... .+++....... . -+...+..+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~-~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 166 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL-GIDDD----NVIGNELFDNGGGIFTGRITGSNCGGKAEALKELY 166 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT-TSSEG----GEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCce----EEEEEeeeecccceeeeeECCCCCCcHHHHHHHHH
Confidence 55559999999999999999999999999888876 88753 12222110000 0 144455555
Q ss_pred --HHHcCCCCCCEEEEecCHhhHHHHH
Q 020871 248 --AKRLGISEKDCLVVEDSVIGLQAAT 272 (320)
Q Consensus 248 --~~~l~~~~~~~v~VGD~~~Dv~~a~ 272 (320)
... +.....+++|||+.+|+.+++
T Consensus 167 ~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 167 IRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 334 788899999999999999875
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-10 Score=90.33 Aligned_cols=54 Identities=20% Similarity=0.391 Sum_probs=50.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh-hHHHHHHcCCeEEEEeCCCCch
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAE 288 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~-Dv~~a~~aG~~~v~v~~~~~~~ 288 (320)
-.+||+|.+|+.+++.+|++|++|+||||..+ |+.+|...||..+.|..|....
T Consensus 178 vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rp 232 (262)
T KOG3040|consen 178 VVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRP 232 (262)
T ss_pred EecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCC
Confidence 46899999999999999999999999999996 9999999999999999987665
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.2e-09 Score=84.42 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=89.0
Q ss_pred CCCCChhHHHHHHHHHHCCC-cEEEEeCCchhhHHHHHHHhhCCccccCcceEEeC----CCCC-----CC------CCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG----DDVK-----QK------KPD 240 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~-~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~----~~~~-----~~------KP~ 240 (320)
.++..||+.++++.+++.|- .+.|+|..+.-.++.+++++ ++..+ |+.+++. ++-+ .. +-.
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~-~~~d~--F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA-GIHDL--FSEIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc-cHHHH--HHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 36899999999999999985 99999999999999999997 99888 7777653 1100 00 001
Q ss_pred H------HHHHHHHH---HcCCCCCCEEEEecCHhhHHHHHHc-CCeEEEEeCCCCchhhccc-cceec-ccccccChhH
Q 020871 241 P------SIYVTAAK---RLGISEKDCLVVEDSVIGLQAATRA-GMACVITYTSSTAEQDFKD-AIAIY-PDLSNVRLKD 308 (320)
Q Consensus 241 ~------~~~~~~~~---~l~~~~~~~v~VGD~~~Dv~~a~~a-G~~~v~v~~~~~~~~~l~~-~~~~~-~~~~~~~~~~ 308 (320)
| ..+.++.. +-|+..++.+||||+.||+-..... +..+++-..++........ +-.+. .-+.--+=.|
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~sg~d 238 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWSSGED 238 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecccHHH
Confidence 1 12333332 2377788999999999999877665 4566665555443322111 11111 1111223467
Q ss_pred HHHHHHHhhh
Q 020871 309 LELLLQNVVA 318 (320)
Q Consensus 309 l~~~l~~~~~ 318 (320)
+..+|+.++.
T Consensus 239 ~~~~L~~lik 248 (256)
T KOG3120|consen 239 LERILQQLIK 248 (256)
T ss_pred HHHHHHHHHH
Confidence 7777776654
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.2e-10 Score=95.57 Aligned_cols=66 Identities=21% Similarity=0.183 Sum_probs=52.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
..+-.+..+++.+++.+|++++++++|||+.||+.|.+.+|..+++ +++.++....++.+.++..+
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am---~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM---GNATPELKKAADYITPSNND 247 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE---TTS-HHHHHHSSEEESSGTC
T ss_pred eCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE---cCCCHHHHHhCCEEecCCCC
Confidence 3455667899999999999999999999999999999999999776 44444445667777776554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.3e-09 Score=101.48 Aligned_cols=116 Identities=16% Similarity=0.170 Sum_probs=84.0
Q ss_pred CCCChhHHHHHHHHHHCC-CcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g-~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
..++||+.++|+.|++.| ++++++||.+.......++++ |+.++ |..+ .+++++ .++++++..++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l-gi~~~--f~~~-------~p~~K~----~~v~~l~~~~~ 448 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL-GIDEV--HAEL-------LPEDKL----AIVKELQEEGG 448 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh-CCCee--eccC-------CHHHHH----HHHHHHHHcCC
Confidence 469999999999999999 999999999999999999997 99877 5532 112223 35555555677
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+|+||||+.||+.++++||+.+.+ +.........++.++.+ .++..+.+++
T Consensus 449 ~v~~vGDg~nD~~al~~A~vgia~---g~~~~~~~~~Ad~vi~~---~~~~~l~~~i 499 (556)
T TIGR01525 449 VVAMVGDGINDAPALAAADVGIAM---GAGSDVAIEAADIVLLN---DDLSSLPTAI 499 (556)
T ss_pred EEEEEECChhHHHHHhhCCEeEEe---CCCCHHHHHhCCEEEeC---CCHHHHHHHH
Confidence 999999999999999999965444 33333333456666654 2344444443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.6e-08 Score=85.10 Aligned_cols=78 Identities=10% Similarity=0.026 Sum_probs=55.4
Q ss_pred CCCCCCHHHHHHHHHHcCCC--CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccc---cc-eecccccccChhH
Q 020871 235 KQKKPDPSIYVTAAKRLGIS--EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD---AI-AIYPDLSNVRLKD 308 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~--~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~---~~-~~~~~~~~~~~~~ 308 (320)
..+-.+...+..+++++|++ .+++++|||+.||+.|.+.+|..+++-|..... +.++. +. ++.++ ..-+.
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~-~~lk~~~~a~~~vt~~---~~~dG 247 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPN-VSLKPGDPGSFLLTPA---PGPEG 247 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCc-cccCccCCCcEEEcCC---CCcHH
Confidence 44556777899999999999 999999999999999999999998876543211 22322 23 45433 23455
Q ss_pred HHHHHHHh
Q 020871 309 LELLLQNV 316 (320)
Q Consensus 309 l~~~l~~~ 316 (320)
+.+.|+++
T Consensus 248 va~~l~~~ 255 (256)
T TIGR01486 248 WREALEHL 255 (256)
T ss_pred HHHHHHHh
Confidence 66666654
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.5e-08 Score=78.27 Aligned_cols=95 Identities=21% Similarity=0.269 Sum_probs=70.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceE--------------EeCCC--CCCCCCCH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF--------------LAGDD--VKQKKPDP 241 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v--------------~~~~~--~~~~KP~~ 241 (320)
+.+.||..++++..++++++++|+|++....+..+++.+.|-+.....|.+ +.-++ .+..||.
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~- 150 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS- 150 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch-
Confidence 689999999999999999999999999999999999987544433111211 11111 3344443
Q ss_pred HHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeE
Q 020871 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 278 (320)
Q Consensus 242 ~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~ 278 (320)
.++.+.-+++.++|.||+..|+.+|+....-.
T Consensus 151 -----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllF 182 (220)
T COG4359 151 -----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLF 182 (220)
T ss_pred -----hHHHhhcCCceEEEecCCcccccHhhhhhhHh
Confidence 45556667788999999999999999877543
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.2e-10 Score=88.26 Aligned_cols=98 Identities=12% Similarity=0.142 Sum_probs=84.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc-ccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~-~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
+..+||+.++|..|.+. +.++|.|++.+..+..+++.+ +... + |+.+++.++....+|. |...++.+|.+++
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l-dp~~~~--f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~ 113 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL-DRGGKV--ISRRLYRESCVFTNGK---YVKDLSLVGKDLS 113 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH-CcCCCE--EeEEEEccccEEeCCC---EEeEchhcCCChh
Confidence 57899999999999998 999999999999999999987 7654 6 7888888776656665 6677888999999
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEe
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITY 282 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~ 282 (320)
+||+|||++.|+.++..+|+.+....
T Consensus 114 ~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 114 KVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred hEEEEeCChhhhccCccCEeecCCCC
Confidence 99999999999999999998876544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.4e-09 Score=87.82 Aligned_cols=51 Identities=24% Similarity=0.378 Sum_probs=46.3
Q ss_pred ChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCC
Q 020871 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV 234 (320)
Q Consensus 181 ~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~ 234 (320)
.|++.++|++|++.|++++|+||+.+..+...++.+ |+..+ |+.++++++.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l-gL~~y--FDvII~~g~i 200 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET-KLEGY--FDIIICGGRK 200 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc-CCCcc--ccEEEECCCc
Confidence 389999999999999999999999999999999997 99998 8988887663
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.9e-09 Score=87.44 Aligned_cols=91 Identities=14% Similarity=0.235 Sum_probs=75.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHH--HHHHHhhCCcc-ccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI--LCLENLIGMER-FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~--~~l~~~~~l~~-~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
..++||+.++|+.|+++|++++++||+.+.... ..++++ |+.. + |+.++++.+... ..+..++++++.+
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~-gl~~~~--~~~Ii~s~~~~~-----~~l~~~~~~~~~~ 94 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL-GINADL--PEMIISSGEIAV-----QMILESKKRFDIR 94 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC-CCCccc--cceEEccHHHHH-----HHHHhhhhhccCC
Confidence 468999999999999999999999999877655 567776 8886 6 899998876542 4677777888999
Q ss_pred CCCEEEEecCHhhHHHHHHcCC
Q 020871 255 EKDCLVVEDSVIGLQAATRAGM 276 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~ 276 (320)
+++|++|||+..|++.....|.
T Consensus 95 ~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 95 NGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred CceEEEeCCcccchhhhcCCCc
Confidence 9999999999999887765554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.7e-07 Score=88.05 Aligned_cols=44 Identities=5% Similarity=-0.049 Sum_probs=39.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCCEEEE--ecCHhhHHHHHHcCCeEEE
Q 020871 237 KKPDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 237 ~KP~~~~~~~~~~~l~~~~~~~v~V--GD~~~Dv~~a~~aG~~~v~ 280 (320)
+-.+...++.+++.++++.++++.| ||+.||+.|.+.+|..+++
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 4566779999999999999999999 9999999999999999766
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=96.56 Aligned_cols=104 Identities=20% Similarity=0.254 Sum_probs=79.0
Q ss_pred CCCChhHHHHHHHHHHCCC-cEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~-~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
-.++||+.++++.|++.|+ +++++||.+.......++++ |++++ |..+. +.++ ..++++++...+
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l-gi~~~--f~~~~-------p~~K----~~~i~~l~~~~~ 426 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL-GIDEV--HAELL-------PEDK----LEIVKELREKYG 426 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc-CChhh--hhccC-------cHHH----HHHHHHHHhcCC
Confidence 3689999999999999999 99999999999999999997 99877 54321 1222 346666666678
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCC-CCchhhccccceec
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTS-STAEQDFKDAIAIY 298 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~-~~~~~~l~~~~~~~ 298 (320)
+|+||||+.||+.+++.||+...+ + .........++.++
T Consensus 427 ~v~~vGDg~nD~~al~~A~vgia~---g~~~~~~~~~~ad~vl 466 (536)
T TIGR01512 427 PVAMVGDGINDAPALAAADVGIAM---GASGSDVAIETADVVL 466 (536)
T ss_pred EEEEEeCCHHHHHHHHhCCEEEEe---CCCccHHHHHhCCEEE
Confidence 999999999999999999975443 3 22333334555555
|
. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.88 E-value=3e-08 Score=82.73 Aligned_cols=43 Identities=7% Similarity=-0.017 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHcCC--CCCCEEEEecCHhhHHHHHHcCCeEE
Q 020871 237 KKPDPSIYVTAAKRLGI--SEKDCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 237 ~KP~~~~~~~~~~~l~~--~~~~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
+-.++.....+++.+++ .+++|++|||+.||+.|.+.+|+.++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 33445577888888865 67799999999999999999999864
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.9e-08 Score=71.13 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=85.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
-++|+.+.+.+++|++. +.+++.|+.....+...++-. |+.. +.++.+ .+++.-..+++.|+-+-+.
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~-gi~~----~rv~a~-------a~~e~K~~ii~eLkk~~~k 95 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV-GIPV----ERVFAG-------ADPEMKAKIIRELKKRYEK 95 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc-CCce----eeeecc-------cCHHHHHHHHHHhcCCCcE
Confidence 37999999999999999 999999998888787777765 7763 445443 3455667888888877799
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
|+||||+.||+.+.++|.+..+-+...+.....+..++.++.+
T Consensus 96 ~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 96 VVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred EEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 9999999999999999999866665555555545556655443
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.81 E-value=3e-08 Score=93.77 Aligned_cols=116 Identities=14% Similarity=0.175 Sum_probs=81.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++++.|++.|++++++|+.+....+..++++ |++ + |..+ .++++. .+++++..++++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l-gi~-~--~~~~-------~p~~K~----~~v~~l~~~~~~ 468 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL-GIN-V--RAEV-------LPDDKA----ALIKELQEKGRV 468 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc-CCc-E--EccC-------ChHHHH----HHHHHHHHcCCE
Confidence 368999999999999999999999999999999999887 885 2 2211 122333 344444446789
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
|+||||+.||+.++++||+...+ +.........++.++.+ .++.+|.+++.
T Consensus 469 v~~VGDg~nD~~al~~A~vgia~---g~g~~~a~~~Advvl~~---~~l~~l~~~i~ 519 (562)
T TIGR01511 469 VAMVGDGINDAPALAQADVGIAI---GAGTDVAIEAADVVLMR---NDLNDVATAID 519 (562)
T ss_pred EEEEeCCCccHHHHhhCCEEEEe---CCcCHHHHhhCCEEEeC---CCHHHHHHHHH
Confidence 99999999999999999976443 22333333456665542 24455554443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.1e-08 Score=97.29 Aligned_cols=116 Identities=14% Similarity=0.174 Sum_probs=86.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.++||+.+.++.|++.|++++++|+.+....+...+++ |+..+ |..+ .|+....++++++..+++|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l-gi~~~--~~~~-----------~p~~K~~~i~~l~~~~~~v 715 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA-GIDEV--IAGV-----------LPDGKAEAIKRLQSQGRQV 715 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCCEE--EeCC-----------CHHHHHHHHHHHhhcCCEE
Confidence 67899999999999999999999999999888888886 88765 3321 1333456777888888899
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
+||||+.||+.+++.||+...+ +......+..++.++ ...++.+|..+++
T Consensus 716 ~~vGDg~nD~~al~~Agvgia~---g~g~~~a~~~ad~vl---~~~~~~~i~~~i~ 765 (834)
T PRK10671 716 AMVGDGINDAPALAQADVGIAM---GGGSDVAIETAAITL---MRHSLMGVADALA 765 (834)
T ss_pred EEEeCCHHHHHHHHhCCeeEEe---cCCCHHHHHhCCEEE---ecCCHHHHHHHHH
Confidence 9999999999999999996555 333444444555433 2234555555554
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.7e-07 Score=83.79 Aligned_cols=46 Identities=17% Similarity=0.129 Sum_probs=39.8
Q ss_pred CCCCCCHHHHHHHHHHc---CCCCCCEEEEecCHhhHHHHHHcC-CeEEE
Q 020871 235 KQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAG-MACVI 280 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l---~~~~~~~v~VGD~~~Dv~~a~~aG-~~~v~ 280 (320)
..+-.+...+..+++++ |++++++++|||+.||++|.+.+| ..+++
T Consensus 171 p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 171 PQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred eCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 34555678999999999 999999999999999999999999 56555
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.72 E-value=9.2e-09 Score=84.73 Aligned_cols=47 Identities=19% Similarity=0.116 Sum_probs=42.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
.+.+.+++..+..++++++++++++++|||+.||+.+++.+|+..++
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 45678889999999999999999999999999999999999998653
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.4e-06 Score=73.96 Aligned_cols=50 Identities=10% Similarity=-0.091 Sum_probs=37.3
Q ss_pred CCCCHHHHHHHHHHcCCC--CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 237 KKPDPSIYVTAAKRLGIS--EKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 237 ~KP~~~~~~~~~~~l~~~--~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
.-++......+.+.+.-. +-.++.+||++||+.|.+.+...+| |.++...
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vv-i~~~~~~ 257 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVV-LPSPIAD 257 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEE-ecCCCCC
Confidence 345666777777776543 4479999999999999999999965 4555544
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.7e-08 Score=79.58 Aligned_cols=109 Identities=16% Similarity=0.281 Sum_probs=64.0
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchh-------hHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHH
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKS-------SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAK 249 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~-------~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~ 249 (320)
..++.||+.+.|+.|.+.|+.++++|..... .-...+++.++-..+ -+.++++ .|-
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~--~~~~~~~-----~K~---------- 133 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY--DNLIFTG-----DKT---------- 133 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH--CCEEEES-----SGG----------
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch--heEEEec-----CCC----------
Confidence 4589999999999999999888877766543 223455554343222 2344432 121
Q ss_pred HcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 250 ~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
.++. + ++|+|++..+..+...|+.++++..+++.... .-....+|.|+.+++-
T Consensus 134 ~v~~---D-vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~--------~~~Rv~~W~ei~~~i~ 186 (191)
T PF06941_consen 134 LVGG---D-VLIDDRPHNLEQFANAGIPVILFDQPYNRDES--------NFPRVNNWEEIEDLIL 186 (191)
T ss_dssp GC-----S-EEEESSSHHHSS-SSESSEEEEE--GGGTT----------TSEEE-STTSHHHHHH
T ss_pred eEec---c-EEecCChHHHHhccCCCceEEEEcCCCCCCCC--------CCccCCCHHHHHHHHH
Confidence 1222 2 78999999999999999999999888776432 1122235677666653
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.2e-07 Score=74.35 Aligned_cols=103 Identities=16% Similarity=0.080 Sum_probs=62.9
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhh---HHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG 252 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~---~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~ 252 (320)
+..+..|++.++++.|+++|++++++|+..... ....|... |+..+ +.++-...-...|+...+-....+++-
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~-G~~~~---~~LiLR~~~d~~~~~~~yKs~~R~~l~ 192 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINA-GFTGW---KHLILRGLEDSNKTVVTYKSEVRKSLM 192 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHc-CCCCc---CeeeecCCCCCCchHhHHHHHHHHHHH
Confidence 456899999999999999999999999998665 44455554 65543 555554322223332221112221221
Q ss_pred CCC-CCEEEEecCHhhHHHHHHcCCeEEEEeC
Q 020871 253 ISE-KDCLVVEDSVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 253 ~~~-~~~v~VGD~~~Dv~~a~~aG~~~v~v~~ 283 (320)
-.. .=+..|||..+|+.+. .+|..+.-+++
T Consensus 193 ~~GYrIv~~iGDq~sDl~G~-~~~~RtFKLPN 223 (229)
T TIGR01675 193 EEGYRIWGNIGDQWSDLLGS-PPGRRTFKLPN 223 (229)
T ss_pred hCCceEEEEECCChHHhcCC-CccCceeeCCC
Confidence 111 2256899999999663 55555554443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.4e-07 Score=78.41 Aligned_cols=67 Identities=13% Similarity=-0.091 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHc-------CCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA-------GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 241 ~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~a-------G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
...+..++++++..+++++||||+.+|+.+++.+ |..++.+..+.. ...+.++++ ++.++.++|
T Consensus 169 g~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~----~~~A~~~~~-----~~~~v~~~L 239 (244)
T TIGR00685 169 GEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSK----KTVAKFHLT-----GPQQVLEFL 239 (244)
T ss_pred HHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCc----CCCceEeCC-----CHHHHHHHH
Confidence 5899999999999999999999999999999999 666677753321 123455554 566777777
Q ss_pred HHh
Q 020871 314 QNV 316 (320)
Q Consensus 314 ~~~ 316 (320)
+.+
T Consensus 240 ~~l 242 (244)
T TIGR00685 240 GLL 242 (244)
T ss_pred HHH
Confidence 654
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.2e-08 Score=69.91 Aligned_cols=82 Identities=17% Similarity=0.300 Sum_probs=65.4
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCH---HHHHHHHHHc--
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP---SIYVTAAKRL-- 251 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~---~~~~~~~~~l-- 251 (320)
.+.++|.+.++++.+|..|+-+..+|=+......+.++.+ ++.+| |+-++. +|+| .++.++++.+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral-~~~~y--Fhy~Vi-------ePhP~K~~ML~~llr~i~~ 108 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL-DLLQY--FHYIVI-------EPHPYKFLMLSQLLREINT 108 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh-chhhh--EEEEEe-------cCCChhHHHHHHHHHHHHH
Confidence 3689999999999999999999999988888788888887 99999 887664 2333 3555565554
Q ss_pred ----CCCCCCEEEEecCHhhH
Q 020871 252 ----GISEKDCLVVEDSVIGL 268 (320)
Q Consensus 252 ----~~~~~~~v~VGD~~~Dv 268 (320)
.+.|++++|++|+.--+
T Consensus 109 er~~~ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 109 ERNQKIKPSEIVYLDDRRIHF 129 (164)
T ss_pred hhccccCcceEEEEecccccH
Confidence 37899999999998433
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.8e-07 Score=65.29 Aligned_cols=84 Identities=21% Similarity=0.215 Sum_probs=51.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHH---HHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~---~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
.++||+.++|+.|+++|++++++||+...... ..++.+ |+..- .+.++.+ .......+++. ...
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~-Gi~~~--~~~i~ts---------~~~~~~~l~~~-~~~ 80 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKL-GIPVD--EDEIITS---------GMAAAEYLKEH-KGG 80 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHT-TTT----GGGEEEH---------HHHHHHHHHHH-TTS
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhc-CcCCC--cCEEECh---------HHHHHHHHHhc-CCC
Confidence 58999999999999999999999999854433 344454 66633 4666654 22333334432 234
Q ss_pred CCEEEEecCHhhHHHHHHcCC
Q 020871 256 KDCLVVEDSVIGLQAATRAGM 276 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~ 276 (320)
.+++++|-. ...+.++.+|+
T Consensus 81 ~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 81 KKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp SEEEEES-H-HHHHHHHHTTE
T ss_pred CEEEEEcCH-HHHHHHHHcCC
Confidence 667777765 55666666664
|
... |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=7.2e-08 Score=72.76 Aligned_cols=80 Identities=16% Similarity=0.285 Sum_probs=69.8
Q ss_pred HHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhh
Q 020871 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267 (320)
Q Consensus 188 l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~D 267 (320)
++.|.+.|++++|+|+.+...++...+.+ |+.++ +.. .+.+...|..+++++++.+++|.||||..+|
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~L-GI~~~--~qG---------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~D 111 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDL-GIKHL--YQG---------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVD 111 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHc-CCcee--eec---------hHhHHHHHHHHHHHhCCCHHHhhhhcCcccc
Confidence 45678889999999999999999999997 98876 332 2345678999999999999999999999999
Q ss_pred HHHHHHcCCeEE
Q 020871 268 LQAATRAGMACV 279 (320)
Q Consensus 268 v~~a~~aG~~~v 279 (320)
+.....+|.+++
T Consensus 112 lpvm~~vGls~a 123 (170)
T COG1778 112 LPVMEKVGLSVA 123 (170)
T ss_pred HHHHHHcCCccc
Confidence 999999999865
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.9e-06 Score=73.84 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=50.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHc----CCeEEEEeCCCCchhhccccceecccccccChhHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA----GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 311 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~a----G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 311 (320)
.+..+...+..+++++|+..+++++|||+.||..|.+.+ |.. |.+..+. ..+.+.+++ +.++..
T Consensus 171 ~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vavg~a~------~~A~~~l~~-----~~~v~~ 238 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKVGTGA------TQASWRLAG-----VPDVWS 238 (266)
T ss_pred CCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEECCCC------CcCeEeCCC-----HHHHHH
Confidence 344667899999999999999999999999999999988 655 4443221 234444444 556666
Q ss_pred HHHHhh
Q 020871 312 LLQNVV 317 (320)
Q Consensus 312 ~l~~~~ 317 (320)
+|+.+.
T Consensus 239 ~L~~l~ 244 (266)
T PRK10187 239 WLEMIT 244 (266)
T ss_pred HHHHHH
Confidence 666554
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.8e-07 Score=77.95 Aligned_cols=91 Identities=22% Similarity=0.286 Sum_probs=56.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhh---HHHHHHHhhCCccccCcceEEe-CCCCCCCCC----CHHHHHHH
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLA-GDDVKQKKP----DPSIYVTA 247 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~---~~~~l~~~~~l~~~~~fd~v~~-~~~~~~~KP----~~~~~~~~ 247 (320)
......||+.++++.++++|++|+++||..... ...-|... |...+ +.++. .......+. +..-...+
T Consensus 112 ~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~-G~~~~---~~l~lr~~~~~~~~~~~~yK~~~r~~i 187 (229)
T PF03767_consen 112 GKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKA-GFPGW---DHLILRPDKDPSKKSAVEYKSERRKEI 187 (229)
T ss_dssp TGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH-TTSTB---SCGEEEEESSTSS------SHHHHHHH
T ss_pred ccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHc-CCCcc---chhccccccccccccccccchHHHHHH
Confidence 334789999999999999999999999987553 33445554 76543 44433 222111111 22233333
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHH
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATR 273 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~ 273 (320)
.++ |.. =+++|||..+|+..++.
T Consensus 188 ~~~-Gy~--Ii~~iGD~~~D~~~~~~ 210 (229)
T PF03767_consen 188 EKK-GYR--IIANIGDQLSDFSGAKT 210 (229)
T ss_dssp HHT-TEE--EEEEEESSGGGCHCTHH
T ss_pred HHc-CCc--EEEEeCCCHHHhhcccc
Confidence 333 332 27899999999999443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.6e-07 Score=92.00 Aligned_cols=99 Identities=17% Similarity=0.273 Sum_probs=80.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCC----------------CCCCHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ----------------KKPDPS 242 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~----------------~KP~~~ 242 (320)
+++||+.+.++.|++.|+++.++|+.+........+++ |+... ++.++.+.+... ....|+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~-Gi~~~--~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL-GMPSK--TSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCC--CCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 67999999999999999999999999999999999887 98765 555655544322 235666
Q ss_pred HHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 243 ~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
-...+++.+....+.+.|+||+.||+.+++.|++...+
T Consensus 605 ~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~ 642 (884)
T TIGR01522 605 HKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM 642 (884)
T ss_pred HHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec
Confidence 66777777766668899999999999999999976544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.6e-08 Score=82.74 Aligned_cols=48 Identities=4% Similarity=-0.172 Sum_probs=37.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEec----CHhhHHHHHHcCCeEEEEeCCCC
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD----~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
+..+-.+..++..++ +++++++||| +.||++|.+.-|..++-|.++..
T Consensus 184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 344555555655555 8999999999 79999999999999988866543
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.8e-07 Score=75.33 Aligned_cols=49 Identities=20% Similarity=0.194 Sum_probs=37.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
+..-.+.....++++++++++++++++|||.||+.|. ..+...|.|.+.
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 3444567799999999999999999999999999999 667777777553
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.1e-07 Score=79.00 Aligned_cols=46 Identities=4% Similarity=-0.162 Sum_probs=38.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEec----CHhhHHHHHHcCCeEEEEeC
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD----~~~Dv~~a~~aG~~~v~v~~ 283 (320)
+..+-.+...+..++++ +++++.||| +.||++|.+.+|..++.|.+
T Consensus 183 ~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 183 FPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred eeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 34556667788999888 599999999 89999999999888787763
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.4e-06 Score=69.57 Aligned_cols=104 Identities=17% Similarity=0.209 Sum_probs=61.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEEeCCCCCCCCCCHHHHHHH-HH---
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTA-AK--- 249 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~-~~--- 249 (320)
...+..|++.++.+.+++.|++|.++||.....-..-.+.+ .|...+ +.++-.......+.+.--|+.. .+
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~---~~LiLR~~~D~~~~~av~yKs~~R~~li 218 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW---EKLILKDPQDNSAENAVEYKTAARAKLI 218 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc---ceeeecCCCCCccchhHHHHHHHHHHHH
Confidence 44689999999999999999999999999864433333333 155433 5555443322222222222222 11
Q ss_pred HcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 250 ~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
+-|. .=+..|||..+|+.+....+-.+.-++++
T Consensus 219 ~eGY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 219 QEGY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred HcCc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 2232 22578999999996655223455555554
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.9e-06 Score=65.79 Aligned_cols=97 Identities=16% Similarity=0.165 Sum_probs=59.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHH---HHHHHhh--CCccccCcceEEeCCC---------CCCCCC---CH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLI--GMERFEGLDCFLAGDD---------VKQKKP---DP 241 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~---~~l~~~~--~l~~~~~fd~v~~~~~---------~~~~KP---~~ 241 (320)
...|++.++++.++++|+++.++|+....... ..++.+. +.. + ....++++.. +-..+| +.
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~-l-p~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHN-L-PHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhcccc-C-CCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 36799999999999999999999999876553 4444420 111 1 0123443322 112333 23
Q ss_pred HHHHHHHHHcCCCC-CCEEEEecCHhhHHHHHHcCCe
Q 020871 242 SIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 242 ~~~~~~~~~l~~~~-~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
+.+..+.+.+.-.- .=+..+||+.+|+++-+++|+.
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 34444444443111 2234588889999999999996
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.9e-06 Score=82.93 Aligned_cols=114 Identities=19% Similarity=0.219 Sum_probs=79.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
+++||+.+.++.|++.|++++++|+.+......+.+++ |+..+ ++ ..+..| ..++++++ .+..|
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l-gi~~~--~~------~~p~~K------~~~v~~l~-~~~~v 631 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL-GIDFR--AG------LLPEDK------VKAVTELN-QHAPL 631 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCee--cC------CCHHHH------HHHHHHHh-cCCCE
Confidence 78999999999999999999999999999999999887 88643 22 111122 22455555 34689
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
+||||+.||..+++.|++...+- .......+.++.++- ..++..|..++.
T Consensus 632 ~mvGDgiNDapAl~~A~vgia~g---~~~~~a~~~adivl~---~~~l~~l~~~i~ 681 (741)
T PRK11033 632 AMVGDGINDAPAMKAASIGIAMG---SGTDVALETADAALT---HNRLRGLAQMIE 681 (741)
T ss_pred EEEECCHHhHHHHHhCCeeEEec---CCCHHHHHhCCEEEe---cCCHHHHHHHHH
Confidence 99999999999999999776553 333333344554432 224555554443
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=7e-06 Score=63.38 Aligned_cols=105 Identities=17% Similarity=0.175 Sum_probs=67.3
Q ss_pred ChhHHHHHHHHHHCCCcEEEEeCCchhhHH---HHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 181 ~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~---~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
-.-+++++.....+|-.|+.+|+..+...+ +.|+..+.+... .-.++.++. .||...--...++..++
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~pv~f~Gdk---~k~~qy~Kt~~i~~~~~---- 186 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NPVIFAGDK---PKPGQYTKTQWIQDKNI---- 186 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--cceeeccCC---CCcccccccHHHHhcCc----
Confidence 344577788888899999999988764443 344444566665 334455532 23332222345566565
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCC-CCchhhcccc
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTS-STAEQDFKDA 294 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~-~~~~~~l~~~ 294 (320)
-++.||+-+|+.+|+.+|...|-+.+. +.....++.+
T Consensus 187 ~IhYGDSD~Di~AAkeaG~RgIRilRAaNSTy~PlP~a 224 (237)
T COG3700 187 RIHYGDSDNDITAAKEAGARGIRILRAANSTYKPLPQA 224 (237)
T ss_pred eEEecCCchhhhHHHhcCccceeEEecCCccCCcCccc
Confidence 589999999999999999998866543 3333334433
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.5e-05 Score=62.97 Aligned_cols=101 Identities=18% Similarity=0.215 Sum_probs=79.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCC----ccccCcceEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGM----ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG 252 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l----~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~ 252 (320)
..|+++.+.++.-+..|++++|.|.+.......+...- ..+ ..| ||.- -..|-....|..+.+.+|
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gy--fDt~------iG~K~e~~sy~~I~~~Ig 194 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGY--FDTT------IGLKVESQSYKKIGHLIG 194 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhh--hhcc------ccceehhHHHHHHHHHhC
Confidence 68999999999999999999999999887554443332 011 122 3321 124667789999999999
Q ss_pred CCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 253 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 253 ~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
.++.++++.-|...-..+|+.+|+.+..+.+|++.
T Consensus 195 ~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna 229 (254)
T KOG2630|consen 195 KSPREILFLTDVPREAAAARKAGLQAGLVSRPGNA 229 (254)
T ss_pred CChhheEEeccChHHHHHHHhcccceeeeecCCCC
Confidence 99999999999999999999999998887776654
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.17 E-value=9e-06 Score=81.46 Aligned_cols=118 Identities=16% Similarity=0.192 Sum_probs=80.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC--cceEEeCCCC----------------CCCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG--LDCFLAGDDV----------------KQKKPD 240 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~--fd~v~~~~~~----------------~~~KP~ 240 (320)
+++||+.+.++.|++.|+++.++|+..........+++ |+..-.. .+..+.+.+. -..+-.
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~-gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI-GIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc-CCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 57999999999999999999999999988888888887 7753100 0112222111 112233
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 241 ~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
|+--..+++.++-..+.+.|+||+.||+.+.+.|++...+- . +.......++.++.+
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~--g~~~ak~aAD~vl~d 672 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-S--GTEVAKEASDMVLAD 672 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-C--CcHHHHHhcCeEEcc
Confidence 44446666777666678889999999999999999975542 2 222333456666655
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.5e-05 Score=76.42 Aligned_cols=116 Identities=16% Similarity=0.181 Sum_probs=82.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
++.|++.+.++.||+.|+++.++|+.++...+.+.+++ |++++ +-. -+|+ --...++++.-.-..+
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l-GId~v--~Ae---------llPe--dK~~~V~~l~~~g~~V 602 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL-GIDEV--RAE---------LLPE--DKAEIVRELQAEGRKV 602 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-ChHhh--ecc---------CCcH--HHHHHHHHHHhcCCEE
Confidence 68999999999999999999999999999999999997 98766 222 2232 3355566665444679
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
.||||+.||..+...|.....+-. ..+-..+.++.++=+ .++..+...++
T Consensus 603 amVGDGINDAPALA~AdVGiAmG~---GtDvA~eaADvvL~~---~dL~~v~~ai~ 652 (713)
T COG2217 603 AMVGDGINDAPALAAADVGIAMGS---GTDVAIEAADVVLMR---DDLSAVPEAID 652 (713)
T ss_pred EEEeCCchhHHHHhhcCeeEeecC---CcHHHHHhCCEEEec---CCHHHHHHHHH
Confidence 999999999999999998866533 333333455543321 24444444443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.4e-05 Score=76.40 Aligned_cols=89 Identities=12% Similarity=0.182 Sum_probs=69.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.+.||+.+.+++|++.|+++.++|+.+........+++ |++++ ++. ..| +--..+++.+.-....+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l-GI~~v------~a~-----~~P--edK~~~v~~lq~~g~~V 511 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA-GVDDF------IAE-----ATP--EDKIALIRQEQAEGKLV 511 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCEE------EcC-----CCH--HHHHHHHHHHHHcCCeE
Confidence 68899999999999999999999999999999888887 88654 221 222 33344444443334579
Q ss_pred EEEecCHhhHHHHHHcCCeEEEE
Q 020871 259 LVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
.|+||+.||..+.+.|+...++-
T Consensus 512 amvGDG~NDapAL~~AdvGiAm~ 534 (675)
T TIGR01497 512 AMTGDGTNDAPALAQADVGVAMN 534 (675)
T ss_pred EEECCCcchHHHHHhCCEeEEeC
Confidence 99999999999999999987663
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=72.91 Aligned_cols=105 Identities=15% Similarity=0.224 Sum_probs=73.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhC--------CccccCcceEEeCCC----------------
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG--------MERFEGLDCFLAGDD---------------- 233 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~--------l~~~~~fd~v~~~~~---------------- 233 (320)
+...|.+..+|+.||++|.++.++||+.-..+...+..+.| +..+ ||.|++...
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dl--FDvVIv~A~KP~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDL--FDVVIVDARKPGFFTEGRPFREVDT 259 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGC--ECEEEES--CCHHHCT---EEEEET
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhh--eeEEEEcCCCCcccCCCCceEEEEC
Confidence 44568999999999999999999999999999999888754 3455 999887522
Q ss_pred -CCCCCCCH-------------HHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHc-CCeEEEEeCC
Q 020871 234 -VKQKKPDP-------------SIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRA-GMACVITYTS 284 (320)
Q Consensus 234 -~~~~KP~~-------------~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~a-G~~~v~v~~~ 284 (320)
.+..+... -....+++.+|...++|+||||+. .|+...+.. ||.+++|-..
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 11111111 126677888899999999999999 699988887 9999988443
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.4e-05 Score=73.86 Aligned_cols=103 Identities=13% Similarity=0.190 Sum_probs=77.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
++.||+.+.+++||+.|+++.++|+.+......+.+++ |++++ |. .- .|+--..+.+.+.-.-+.+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GI~~v--~A---------~~--~PedK~~iV~~lQ~~G~~V 506 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA-GVDRF--VA---------EC--KPEDKINVIREEQAKGHIV 506 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCceE--Ec---------CC--CHHHHHHHHHHHHhCCCEE
Confidence 68899999999999999999999999999999888887 88754 22 12 2344455666665444568
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceec
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~ 298 (320)
.|+||+.||..+.+.|.+...+- + ...-..+.++.+.
T Consensus 507 aMtGDGvNDAPALa~ADVGIAMg-s--GTdvAkeAADiVL 543 (673)
T PRK14010 507 AMTGDGTNDAPALAEANVGLAMN-S--GTMSAKEAANLID 543 (673)
T ss_pred EEECCChhhHHHHHhCCEEEEeC-C--CCHHHHHhCCEEE
Confidence 89999999999999999886664 3 2333334556554
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.9e-05 Score=74.48 Aligned_cols=116 Identities=13% Similarity=0.170 Sum_probs=81.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.+.||+.+.+++||+.|+++.++|+.+......+.+++ |++++ ++. . .|+--..+.+.+.-.-+-+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GId~v------~A~-----~--~PedK~~iV~~lQ~~G~~V 510 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDDF------LAE-----A--TPEDKLALIRQEQAEGRLV 510 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCcEE------Ecc-----C--CHHHHHHHHHHHHHcCCeE
Confidence 46899999999999999999999999999999888887 88654 221 1 2334455555555444568
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
.|+||+.||..+.+.|.....+- +| ..-..+.++.+.-| -++..+.+.++
T Consensus 511 aMtGDGvNDAPALa~ADVGIAMg-sG--TdvAkeAADiVLld---d~~s~Iv~av~ 560 (679)
T PRK01122 511 AMTGDGTNDAPALAQADVGVAMN-SG--TQAAKEAGNMVDLD---SNPTKLIEVVE 560 (679)
T ss_pred EEECCCcchHHHHHhCCEeEEeC-CC--CHHHHHhCCEEEeC---CCHHHHHHHHH
Confidence 99999999999999999887664 33 22333455555432 23444444443
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.02 E-value=8.1e-05 Score=62.98 Aligned_cols=103 Identities=12% Similarity=0.165 Sum_probs=73.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEE------------eC---CC--------
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFL------------AG---DD-------- 233 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~------------~~---~~-------- 233 (320)
..-+++.++++.|++.|+++..+|..........++.+ .|++ |+... .. ..
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~----fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIl 156 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID----FSSSSFPEDGIISFPVFDSALSRAPSFYDGIL 156 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC----ccccccccCcceecccccCCCCCCceeecCeE
Confidence 46789999999999999999999998866555555544 2554 22111 00 00
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHH----HHcCCeEEEEeCCC
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA----TRAGMACVITYTSS 285 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a----~~aG~~~v~v~~~~ 285 (320)
+..+-++.+++..++.+.|..|+.+|||+|+..++... +..|+...++....
T Consensus 157 ft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 157 FTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred EeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 12345667899999999999999999999999766544 44688877765443
|
The function is not known. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.6e-05 Score=65.54 Aligned_cols=90 Identities=17% Similarity=0.129 Sum_probs=67.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHH---HHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL---ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l---~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
.++||+.++|+.|+++|++++++||+........+ +.+ |+... ++.++++.. .....++..+...
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l-Gi~~~--~~~I~ts~~---------~~~~~l~~~~~~~ 111 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL-GLNVT--EEEIFSSSF---------AAAAYLKSINFPK 111 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC-CCCCC--hhhEeehHH---------HHHHHHHhhccCC
Confidence 57899999999999999999999999854444444 454 77654 677766522 4455556656555
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
.+.++|+++..+.+.++.+|+.++.
T Consensus 112 ~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 112 DKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred CCEEEEEcCHHHHHHHHHCCCEEec
Confidence 5678899999999999999998764
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00015 Score=71.19 Aligned_cols=71 Identities=8% Similarity=0.007 Sum_probs=47.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+-.+......+++ +++++.+++|||+.||..|.+.++..+..+.-+... ..+.+.+++ .+++.++|+.
T Consensus 654 ~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~----s~A~~~l~~-----~~eV~~~L~~ 722 (726)
T PRK14501 654 AGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGE----SRARYRLPS-----QREVRELLRR 722 (726)
T ss_pred CCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCC----CcceEeCCC-----HHHHHHHHHH
Confidence 34456678888887 778899999999999999999974222222223221 355666665 3556677766
Q ss_pred hh
Q 020871 316 VV 317 (320)
Q Consensus 316 ~~ 317 (320)
+.
T Consensus 723 l~ 724 (726)
T PRK14501 723 LL 724 (726)
T ss_pred Hh
Confidence 54
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.88 E-value=6.4e-05 Score=58.76 Aligned_cols=82 Identities=13% Similarity=0.216 Sum_probs=62.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc-cccCc-ceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGL-DCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~-~~~~f-d~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
+.++||+.++|+.|++. ++++|+|++.+..+..+++.+ +.. .+ | +.+++.++.. .+. .+.+-..++.+.
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l-dp~~~~--F~~ri~~rd~~~--~~~---~KdL~~i~~~d~ 127 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI-DPDGKY--FGDRIISRDESG--SPH---TKSLLRLFPADE 127 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh-CcCCCe--eccEEEEeccCC--CCc---cccHHHHcCCCc
Confidence 57899999999999966 999999999999999999997 776 46 7 5667766543 111 111223457788
Q ss_pred CCEEEEecCHhhH
Q 020871 256 KDCLVVEDSVIGL 268 (320)
Q Consensus 256 ~~~v~VGD~~~Dv 268 (320)
+.+++|+|++.-.
T Consensus 128 ~~vvivDd~~~~~ 140 (156)
T TIGR02250 128 SMVVIIDDREDVW 140 (156)
T ss_pred ccEEEEeCCHHHh
Confidence 9999999999533
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0015 Score=60.67 Aligned_cols=94 Identities=16% Similarity=0.127 Sum_probs=55.8
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc------ceEEeCCCCCCCCC-C-HHHHHHHHHHc
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL------DCFLAGDDVKQKKP-D-PSIYVTAAKRL 251 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f------d~v~~~~~~~~~KP-~-~~~~~~~~~~l 251 (320)
++|.+.+. ++++|.. +++|.+.+..++...++.+|++..-+- +..+++.-.+. .+ . .+-...+.+.+
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~-~~c~Ge~Kv~rl~~~~ 185 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKP-GVLVGDHKRDAVLKEF 185 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCC-CCCccHHHHHHHHHHh
Confidence 66766654 4567754 999999999999888763366533111 12222211110 01 1 11122333456
Q ss_pred CCCCCCEEEEecCHhhHHHHHHcCCeEE
Q 020871 252 GISEKDCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 252 ~~~~~~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
|.+... +..||+.+|..+...++-..+
T Consensus 186 g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 186 GDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred CCCCce-EEEECCccHHHHHHhCCccEE
Confidence 654444 899999999999999998754
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=8.1e-05 Score=74.30 Aligned_cols=114 Identities=14% Similarity=0.160 Sum_probs=80.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCC----------------CCCCHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ----------------KKPDPS 242 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~----------------~KP~~~ 242 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+.. +.++.+.+... .+-.|+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~----~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe 624 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV-GLDA----GEVLIGSDIETLSDDELANLAERTTLFARLTPM 624 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCc----cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHH
Confidence 57899999999999999999999999999899888887 8852 33444433211 122344
Q ss_pred HHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 243 ~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
--..+.+.+.-.-.-+.|+||+.||..+.+.|.+...+- ++ ..-..+.++.++-|
T Consensus 625 ~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~g--tdvAkeaADiVLld 679 (902)
T PRK10517 625 HKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GA--VDIAREAADIILLE 679 (902)
T ss_pred HHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-Cc--CHHHHHhCCEEEec
Confidence 445555555444456889999999999999999886653 32 22333456655533
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.82 E-value=9.8e-05 Score=74.41 Aligned_cols=117 Identities=18% Similarity=0.155 Sum_probs=78.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCC----------------CCCCCHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK----------------QKKPDPS 242 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~----------------~~KP~~~ 242 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+..- -..++.+.+.. ...=.|+
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~-GI~~~--~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe 655 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC-GILTF--GGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPL 655 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc-CCCCC--CceEeeHHHhhhCCHHHHHHHhccCeEEEECCHH
Confidence 67899999999999999999999999999898888887 88532 12333332211 0122333
Q ss_pred HHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 243 ~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
--..+.+.+.-.-+.+.|+||+.||..+.+.|.+...+-..+ ..-....++.++.|
T Consensus 656 ~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~g--tdvAk~aADivL~d 711 (941)
T TIGR01517 656 DKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISG--TEVAKEASDIILLD 711 (941)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCc--cHHHHHhCCEEEec
Confidence 444455555433456899999999999999999886652122 22233456666553
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00014 Score=72.49 Aligned_cols=113 Identities=15% Similarity=0.181 Sum_probs=77.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCC----------------CCCCHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ----------------KKPDPS 242 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~----------------~KP~~~ 242 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+.. +.++.+.+... ..-.|+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l-GI~~----~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe 589 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV-GIDA----NDFLLGADIEELSDEELARELRKYHIFARLTPM 589 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCC----CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHH
Confidence 57899999999999999999999999999888888887 8852 22333322210 112233
Q ss_pred HHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecc
Q 020871 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP 299 (320)
Q Consensus 243 ~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~ 299 (320)
--..+.+.+.-.-+.+.|+||+.||..+.+.|.+...+- ++ ..-..+.++.++-
T Consensus 590 ~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~g--tdvAk~aADiVLl 643 (867)
T TIGR01524 590 QKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TA--ADIAKEASDIILL 643 (867)
T ss_pred HHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-Cc--cHHHHHhCCEEEe
Confidence 334444444433456889999999999999999987653 32 2222345555543
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00036 Score=62.53 Aligned_cols=90 Identities=19% Similarity=0.209 Sum_probs=71.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCC----CCCCCCCHHHHHHHHHHcCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~l~~~ 254 (320)
.+|....+.+..|++.|+-++|+|-++...+....+.++ +.++--++ .-.+-|+.+.++.++++||+-
T Consensus 255 ~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp--------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg 326 (574)
T COG3882 255 EAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP--------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLG 326 (574)
T ss_pred hhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC--------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCC
Confidence 455666778889999999999999998888888877652 22332222 124679999999999999999
Q ss_pred CCCEEEEecCHhhHHHHHHcCC
Q 020871 255 EKDCLVVEDSVIGLQAATRAGM 276 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~ 276 (320)
.+..+|++|++...+-.++-+-
T Consensus 327 ~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 327 LDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred ccceEEecCCHHHHHHHHhcCc
Confidence 9999999999998888888775
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00062 Score=52.27 Aligned_cols=95 Identities=18% Similarity=0.141 Sum_probs=62.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.+..++...|..++++ .+++.+|.......+.--..+ ..... .+|.+..-+- ..| -.+++.++++
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l-~~q~i-h~~~l~i~g~--h~K------V~~vrth~id---- 136 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL-FIQNI-HYDHLEIVGL--HHK------VEAVRTHNID---- 136 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH-HHhcc-chhhhhhhcc--ccc------chhhHhhccC----
Confidence 4667888888889888 678888877665443332222 22211 1343322111 122 3467777875
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEeCCCCch
Q 020871 259 LVVEDSV-IGLQAATRAGMACVITYTSSTAE 288 (320)
Q Consensus 259 v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~ 288 (320)
+++.|+. |=++.|+++|++++.+++++++.
T Consensus 137 lf~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred ccccccCchHHHHHHhcCCcEEEecCccccc
Confidence 7899999 67788888999999999998774
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00016 Score=72.33 Aligned_cols=112 Identities=16% Similarity=0.165 Sum_probs=78.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCC----------------CCCCHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ----------------KKPDPS 242 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~----------------~KP~~~ 242 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+.. +.++.+.+... ..-.|+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l-GI~~----~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe 624 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV-GLEP----GEPLLGTEIEAMDDAALAREVEERTVFAKLTPL 624 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCC----CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHH
Confidence 67899999999999999999999999999888888887 8852 23343333211 122344
Q ss_pred HHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceec
Q 020871 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298 (320)
Q Consensus 243 ~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~ 298 (320)
--..+.+.+.-.-+-+.|+||+.||..+.+.|.+...+- ++ ..-..+.++.++
T Consensus 625 ~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~g--tdvAkeaADiVL 677 (903)
T PRK15122 625 QKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SG--ADIAKESADIIL 677 (903)
T ss_pred HHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cc--cHHHHHhcCEEE
Confidence 445555555544456889999999999999999886653 32 222334556554
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00015 Score=71.29 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=76.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCC----------------------C
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK----------------------Q 236 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~----------------------~ 236 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+..- ++.++++. .
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 515 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL-GLGTN-----IYTADVLLKGDNRDDLPSGELGEMVEDADGF 515 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCC-----CcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence 68899999999999999999999999999999888887 88531 11111110 1
Q ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceec
Q 020871 237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298 (320)
Q Consensus 237 ~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~ 298 (320)
.+=.|+--..+.+.+.-.-+.+.|+||+.||..+.+.|.+...+- ++ ..-..+.++.++
T Consensus 516 Ar~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~g--tdvAkeaADivL 574 (755)
T TIGR01647 516 AEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GA--TDAARSAADIVL 574 (755)
T ss_pred EecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CC--cHHHHHhCCEEE
Confidence 112333444455555444467899999999999999999886653 32 222334455544
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00047 Score=56.31 Aligned_cols=86 Identities=17% Similarity=0.210 Sum_probs=57.1
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhh-HH---HHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS-VI---LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG 252 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~-~~---~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~ 252 (320)
...+.||+.++++..-++|..|..+||...+. .. .-|.+. |+..... +.++-- ...|++..-+..+.+.+
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~-g~~~~~~-~~~llk---k~~k~Ke~R~~~v~k~~- 193 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE-GLPQVLE-SHLLLK---KDKKSKEVRRQAVEKDY- 193 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc-Ccccccc-cceEEe---eCCCcHHHHHHHHhhcc-
Confidence 35899999999999999999999999998765 33 334443 6655411 122211 23455555555555533
Q ss_pred CCCCCEEEEecCHhhHHHH
Q 020871 253 ISEKDCLVVEDSVIGLQAA 271 (320)
Q Consensus 253 ~~~~~~v~VGD~~~Dv~~a 271 (320)
+-++.|||+..|+...
T Consensus 194 ---~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 194 ---KIVMLVGDNLDDFGDN 209 (274)
T ss_pred ---ceeeEecCchhhhcch
Confidence 4589999999887544
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0005 Score=51.38 Aligned_cols=30 Identities=20% Similarity=0.301 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhh
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS 208 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~ 208 (320)
.+.+++.+.|+.|++.|+.++++|+.....
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 477889999999999999999999887553
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00097 Score=59.54 Aligned_cols=71 Identities=14% Similarity=0.118 Sum_probs=46.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCC---EEEEecCHhhHHHHHH-----cCCeEEEEeCCCCchhhccccceecccccccChhH
Q 020871 237 KKPDPSIYVTAAKRLGISEKD---CLVVEDSVIGLQAATR-----AGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 308 (320)
Q Consensus 237 ~KP~~~~~~~~~~~l~~~~~~---~v~VGD~~~Dv~~a~~-----aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~ 308 (320)
+-.+......+++++|+...+ .++|||+.+|..|.+. .|+.+ .|..+... ..+.+.++ ++.+
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I-~Vgn~~~~----t~A~y~L~-----dp~e 368 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGI-LVSSVPKE----SNAFYSLR-----DPSE 368 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEE-EEecCCCC----ccceEEcC-----CHHH
Confidence 345677899999999987653 3899999999999986 35553 34322111 13333333 4667
Q ss_pred HHHHHHHhh
Q 020871 309 LELLLQNVV 317 (320)
Q Consensus 309 l~~~l~~~~ 317 (320)
+.++|+.+.
T Consensus 369 V~~~L~~L~ 377 (384)
T PLN02580 369 VMEFLKSLV 377 (384)
T ss_pred HHHHHHHHH
Confidence 777777654
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00043 Score=53.54 Aligned_cols=95 Identities=17% Similarity=0.157 Sum_probs=57.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCC---c-cccCcc-eEEeC---------CCCCCCCCCHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM---E-RFEGLD-CFLAG---------DDVKQKKPDPSIY 244 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l---~-~~~~fd-~v~~~---------~~~~~~KP~~~~~ 244 (320)
...+|+.++.+.++++||++..+|.............+... + .+ .+ .++.+ .|+- .++|+.|
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~l--P~Gpv~~sP~~l~~al~rEvi--~~~p~~f 102 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNL--PDGPVLLSPDSLFSALHREVI--SKDPEEF 102 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccC--CCCCEEECCcchhhhhhcccc--ccChHHH
Confidence 37789999999999999999999998754333222222111 1 12 22 23333 1222 2345455
Q ss_pred HHHH-HHc-CC----CCCCEEEEecCHhhHHHHHHcCCe
Q 020871 245 VTAA-KRL-GI----SEKDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 245 ~~~~-~~l-~~----~~~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
+..+ +.+ .. ...=...+|++.+|+.+-+++|+.
T Consensus 103 K~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 103 KIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 4433 332 11 222345699999999999999996
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00032 Score=71.22 Aligned_cols=119 Identities=13% Similarity=0.150 Sum_probs=79.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC--------cceEEeCCCCCC--------------
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG--------LDCFLAGDDVKQ-------------- 236 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~--------fd~v~~~~~~~~-------------- 236 (320)
++.|++.+.++.|++.|+++.++|+........+.+++ |+..-.. -..++.+.+...
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~-Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV-GIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 68899999999999999999999999999898888887 8742100 013444433211
Q ss_pred --CCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 237 --KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 237 --~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
..=.|+--..+.+.+.-.-+.+.|+||+.||..+.+.|.+...+-..+. .-....++.++.+
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt--~vak~aADivl~d 788 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGS--DVAKDASDIVLSD 788 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCcc--HHHHHhcCEEEec
Confidence 1223334444555554444668899999999999999998866522222 1223355655544
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0038 Score=61.94 Aligned_cols=39 Identities=8% Similarity=-0.077 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHH---HcCCCCCCEEEEecCHhhHHHHHHcC
Q 020871 237 KKPDPSIYVTAAK---RLGISEKDCLVVEDSVIGLQAATRAG 275 (320)
Q Consensus 237 ~KP~~~~~~~~~~---~l~~~~~~~v~VGD~~~Dv~~a~~aG 275 (320)
+-.+......+++ .+|..++++++|||+.||..|.+.++
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 3445667777764 46899999999999999999999886
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00072 Score=56.80 Aligned_cols=50 Identities=24% Similarity=0.399 Sum_probs=44.9
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD 232 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~ 232 (320)
..|.+.+.|.+|++.|--+++=|-|+++++...++.+ ++..+ ||.++++.
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~-~L~~~--Fd~ii~~G 192 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL-KLEGY--FDIIICGG 192 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh-CCccc--cEEEEeCC
Confidence 4577888899999999999999999999999999997 99999 99999863
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.001 Score=64.24 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=67.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
++.||+...+..||+.|++++++|+.+........+++ |+ +.|++. -+|. --....+++.-....+
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V-Gi------~~V~ae-----v~P~--~K~~~Ik~lq~~~~~V 788 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV-GI------DNVYAE-----VLPE--QKAEKIKEIQKNGGPV 788 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh-Cc------ceEEec-----cCch--hhHHHHHHHHhcCCcE
Confidence 68899999999999999999999999999888888887 63 445432 2332 2233444444444679
Q ss_pred EEEecCHhhHHHHHHcCCeEEE
Q 020871 259 LVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
.||||+.||-.+...|.+...+
T Consensus 789 aMVGDGINDaPALA~AdVGIai 810 (951)
T KOG0207|consen 789 AMVGDGINDAPALAQADVGIAI 810 (951)
T ss_pred EEEeCCCCccHHHHhhccceee
Confidence 9999999999999998877544
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00071 Score=67.91 Aligned_cols=101 Identities=19% Similarity=0.214 Sum_probs=73.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc--ceEEeCCCCCC----------------CCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGDDVKQ----------------KKPD 240 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f--d~v~~~~~~~~----------------~KP~ 240 (320)
++.+++.++++.|+++|+++.++|+........+.+++ |+..- - +.++.+.+... .+=.
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~-Gi~~~--~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvs 623 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC-GIEAE--AESALVIDGAELDALSDEELAELVEELSVFARVS 623 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc-CCCCC--CCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcC
Confidence 68899999999999999999999999999898888887 86643 2 23555544221 1122
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEe
Q 020871 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 282 (320)
Q Consensus 241 ~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~ 282 (320)
|+--..+.+.+.-.-.-+.|.||+.||+.|.+.|.++..+..
T Consensus 624 P~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 624 PEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 333333444444334568899999999999999999876654
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0011 Score=63.32 Aligned_cols=117 Identities=15% Similarity=0.233 Sum_probs=80.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc----eEEeCCCCCC----------------CC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD----CFLAGDDVKQ----------------KK 238 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd----~v~~~~~~~~----------------~K 238 (320)
+++|++.+.++.+++.|+++..+|+.+......+.+++ |+-.. -+ ..+++.++.. .+
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i-Gi~~~--~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR 660 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI-GIFSE--DEDVSSMALTGSEFDDLSDEELDDAVRRVLVFAR 660 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh-CCCcC--CccccccccchhhhhcCCHHHHHHHhhcceEEEe
Confidence 68999999999999999999999999999888888887 76544 22 2344433211 01
Q ss_pred CCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 239 P~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
-.|+--..+.+.|+-.-+=+-|-||+.||..+.+.|.+..+|--.|.. -..+.++.+..|
T Consensus 661 ~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTd--VaKeAsDMVL~D 720 (972)
T KOG0202|consen 661 AEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTD--VAKEASDMVLAD 720 (972)
T ss_pred cCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccH--hhHhhhhcEEec
Confidence 123334455555554446688999999999999999998877533322 233455655544
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0013 Score=58.52 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=80.2
Q ss_pred ChhHHHHHHHHHHCCCcEEEEeCCc--hhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 181 RPGVLRLMDEAKAAGKKVAVCSAAT--KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 181 ~~g~~~~l~~L~~~g~~i~i~Tn~~--~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.....++.+.+.++|.++.++|.-. ...++..|... |.+.. --.++.|.+....|.....|..+++.-+++|.+.
T Consensus 101 n~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~-g~d~~--nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w 177 (635)
T COG5610 101 NKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSF-GPDFN--NIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKW 177 (635)
T ss_pred cccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhc-CCCcc--CceeeecceeehhcccchHHHHHHhhcCCChhhe
Confidence 3456899999999999999999875 34455555554 65543 2347888888889999999999999999999999
Q ss_pred EEEecCHh-hHHHHHHcCCeEEEE
Q 020871 259 LVVEDSVI-GLQAATRAGMACVIT 281 (320)
Q Consensus 259 v~VGD~~~-Dv~~a~~aG~~~v~v 281 (320)
+++||+.+ |..++++.|+.+...
T Consensus 178 ~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 178 IHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred EEecCchhhhhcCccccchhHHHH
Confidence 99999995 999999999988654
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0026 Score=59.85 Aligned_cols=85 Identities=16% Similarity=0.210 Sum_probs=65.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.+.+++.+.++.|++.|+++.++|+..........+.+ |+ + ..-.|+.-..+.+.+.-....+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l-gi--~--------------~~~~p~~K~~~v~~l~~~g~~v 409 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL-GI--F--------------ARVTPEEKAALVEALQKKGRVV 409 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-Cc--e--------------eccCHHHHHHHHHHHHHCCCEE
Confidence 68899999999999999999999999998888887776 65 1 1123334445555543333679
Q ss_pred EEEecCHhhHHHHHHcCCeEEE
Q 020871 259 LVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
.||||+.||..+.+.|+....+
T Consensus 410 ~~vGDg~nD~~al~~Advgia~ 431 (499)
T TIGR01494 410 AMTGDGVNDAPALKKADVGIAM 431 (499)
T ss_pred EEECCChhhHHHHHhCCCcccc
Confidence 9999999999999999877444
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.004 Score=47.13 Aligned_cols=99 Identities=26% Similarity=0.278 Sum_probs=62.3
Q ss_pred CCChhHHHHHHHHHHC-C-CcEEEEeCCch-------hhHHHHHHHhhCCccccCcceEEeCCCCCCCCCC--HHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAA-G-KKVAVCSAATK-------SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD--PSIYVTA 247 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~-g-~~i~i~Tn~~~-------~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~--~~~~~~~ 247 (320)
.+.|.-..-+++++.. | ..++++||+.. ....+.++...|+.-. ...+ .||. .+.+.+.
T Consensus 61 ~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVl--------RHs~--kKP~ct~E~~~y~ 130 (190)
T KOG2961|consen 61 AIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVL--------RHSV--KKPACTAEEVEYH 130 (190)
T ss_pred ccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCceE--------eecc--cCCCccHHHHHHH
Confidence 4566666666666664 3 67889998742 1233344443355432 1222 3443 3444443
Q ss_pred HHHcC-CCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCc
Q 020871 248 AKRLG-ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 248 ~~~l~-~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
...-. .+++|++||||+. .|+.+|...|-.+||...+...
T Consensus 131 ~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~ 172 (190)
T KOG2961|consen 131 FGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRA 172 (190)
T ss_pred hCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccccc
Confidence 32222 5789999999999 7999999999999999887654
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.027 Score=49.21 Aligned_cols=63 Identities=17% Similarity=0.176 Sum_probs=50.4
Q ss_pred hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 217 IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 217 ~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
+||+.++..+.|+++-.+++ -..|+++.+++|- .-.-++|||+...-.+|++..|+++-++..
T Consensus 391 ~gLg~~fpiENIYSa~kiGK----escFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~h 453 (468)
T KOG3107|consen 391 YGLGSSFPIENIYSATKIGK----ESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISSH 453 (468)
T ss_pred HhcCCcccchhhhhhhhccH----HHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeeccC
Confidence 58888877788887766553 4599999999997 455678999999999999999998766543
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0017 Score=65.92 Aligned_cols=119 Identities=18% Similarity=0.214 Sum_probs=77.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC----------------------cceEEeCCCCC-
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG----------------------LDCFLAGDDVK- 235 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~----------------------fd~v~~~~~~~- 235 (320)
++.|++.+.++.+++.|+++.++|+..........+++ |+-.-.. -..++.+.+..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 57899999999999999999999999999888888887 7631100 01244443221
Q ss_pred -----------------CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceec
Q 020871 236 -----------------QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298 (320)
Q Consensus 236 -----------------~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~ 298 (320)
..+-.|+--..+.+.+.-.-.-|.|+||+.||+.+.+.|.+...+-..|.. -....++.++
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~--vak~aADivL 724 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD--VSKQAADMIL 724 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccH--HHHHhhceEE
Confidence 122233333444444443335688999999999999999988765323221 1233456655
Q ss_pred cc
Q 020871 299 PD 300 (320)
Q Consensus 299 ~~ 300 (320)
.|
T Consensus 725 ~d 726 (997)
T TIGR01106 725 LD 726 (997)
T ss_pred ec
Confidence 44
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0016 Score=55.96 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=71.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhC--CccccCcceEEeCCCC-----CCCCCCHH---------
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG--MERFEGLDCFLAGDDV-----KQKKPDPS--------- 242 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~--l~~~~~fd~v~~~~~~-----~~~KP~~~--------- 242 (320)
.-.|....+|+.|+++|.++.++||++...++.-...+-| +.++ ||.|+.-.+- ...+|=..
T Consensus 240 ~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdl--FDVVIvqA~KP~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 240 ERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDL--FDVVIVQANKPEFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred hccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhh--hheeEEecCCCcccccccCcchhhcccccchh
Confidence 4567888999999999999999999999888765554433 3455 8877763221 11112110
Q ss_pred ----------------HHHHHHHHcCCCCCCEEEEecCH-hhHHHHH-HcCCeEEEE
Q 020871 243 ----------------IYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVIT 281 (320)
Q Consensus 243 ----------------~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~-~aG~~~v~v 281 (320)
.+...++.-|..-.+++++||+. +|+.... ..||.+..+
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 13345555678888999999999 7999888 899986544
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.014 Score=51.84 Aligned_cols=70 Identities=11% Similarity=-0.027 Sum_probs=43.8
Q ss_pred CCHHHHHHHHHHcCCCC---CCEEEEecCHhhHHHHHHcC----CeEEEEeCCCCchhhccccceecccccccChhHHHH
Q 020871 239 PDPSIYVTAAKRLGISE---KDCLVVEDSVIGLQAATRAG----MACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 311 (320)
Q Consensus 239 P~~~~~~~~~~~l~~~~---~~~v~VGD~~~Dv~~a~~aG----~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 311 (320)
.+....+.+++.++... .-.+|+||...|-.+.+.+. .-+|.|..... -..|.+.++ ++.++.+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k----~T~A~y~L~-----dp~eV~~ 353 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK----DTDASYSLQ-----DPSEVMD 353 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC----CCcceEeCC-----CHHHHHH
Confidence 45678899999988643 35899999999877777652 22455532111 123444444 4667777
Q ss_pred HHHHhh
Q 020871 312 LLQNVV 317 (320)
Q Consensus 312 ~l~~~~ 317 (320)
+|+.+.
T Consensus 354 fL~~L~ 359 (366)
T PLN03017 354 FLARLV 359 (366)
T ss_pred HHHHHH
Confidence 777664
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.019 Score=50.78 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHcCCCCC---CEEEEecCHhhHHHHHHc-----CCeEEEEeCCCCchhhccccceecccccccChhHHH
Q 020871 239 PDPSIYVTAAKRLGISEK---DCLVVEDSVIGLQAATRA-----GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 310 (320)
Q Consensus 239 P~~~~~~~~~~~l~~~~~---~~v~VGD~~~Dv~~a~~a-----G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 310 (320)
.+......+++.++..-. -.+|+||...|-.+.+.. |+ .|.|..+... ..|.+.++ ++.++.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~----T~A~y~L~-----dp~eV~ 338 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKE----TNASYSLQ-----EPDEVM 338 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCC----CcceEeCC-----CHHHHH
Confidence 456688899998875432 279999999987777654 32 3444321110 13334433 467777
Q ss_pred HHHHHhhh
Q 020871 311 LLLQNVVA 318 (320)
Q Consensus 311 ~~l~~~~~ 318 (320)
++|+.+..
T Consensus 339 ~~L~~L~~ 346 (354)
T PLN02151 339 EFLERLVE 346 (354)
T ss_pred HHHHHHHH
Confidence 77776653
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.02 Score=46.33 Aligned_cols=93 Identities=16% Similarity=0.174 Sum_probs=59.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc--ceEEeCCC--------CC--CCCCCHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGDD--------VK--QKKPDPSIYVT 246 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f--d~v~~~~~--------~~--~~KP~~~~~~~ 246 (320)
...|++.++|+.+.+. +.++|.|.+....++.++..+ ++..-..+ ..+..++. .+ ..|+ +..
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l-~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~ 118 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTEL-GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGV 118 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHh-cccCCccceEEEEeccccceeeEeeccCcEEEee----cHH
Confidence 5789999999999995 999999999999999999886 54221001 11221111 11 1233 223
Q ss_pred HHHHcC--CCCCCEEEEecCHhhHHHHHHcCCe
Q 020871 247 AAKRLG--ISEKDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 247 ~~~~l~--~~~~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
+-++++ .+.+++|+|+|++....+--..|+.
T Consensus 119 lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 119 IWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred hhhhcccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence 333554 3778999999999765554445544
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.027 Score=48.65 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=58.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHH---HHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~---~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
.++||+.++|++|+++|++++++||+....... .++.+ |+..- .+.++++ .......+++.....
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~-G~~~~--~~~i~ts---------~~~~~~~l~~~~~~~ 85 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARL-GFNGL--AEQLFSS---------ALCAARLLRQPPDAP 85 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCC--hhhEecH---------HHHHHHHHHhhCcCC
Confidence 589999999999999999999999976443333 44444 66432 3444443 223344555544445
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEE
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
.+++++|+.. ....++..|+..+
T Consensus 86 ~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 86 KAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred CEEEEEcCHH-HHHHHHHCCCEEe
Confidence 6799999864 3455677888754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0054 Score=49.57 Aligned_cols=38 Identities=13% Similarity=-0.003 Sum_probs=23.7
Q ss_pred CCccEEEEecCCccccc-h-HHHHHHHHHHHHhcccCCCC
Q 020871 65 QSLQALIFDCDGVIIES-E-HLHRQAYNDAFSHFNVRCDP 102 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~-~-~~~~~~~~~~~~~~g~~~~~ 102 (320)
.++.+|+.|+||||++. . .....-|..-+.+.|.+...
T Consensus 5 ~~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~ 44 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVIL 44 (274)
T ss_pred ccceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEE
Confidence 36888999999999982 1 12223333444566766544
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.005 Score=63.14 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=35.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l 219 (320)
++.+|+.+.++.|++.|++++++|+...+.+..+.+.. |+
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~-~i 670 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSC-RL 670 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh-CC
Confidence 68899999999999999999999999888787777665 54
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0031 Score=57.27 Aligned_cols=90 Identities=12% Similarity=0.213 Sum_probs=71.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEE
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL 259 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v 259 (320)
.-||++|-+.+||+.|++.+.||+.++-....+.++. |+++| . ...||. --..++++.+-.-.=+-
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA-GVDdf--i---------AeatPE--dK~~~I~~eQ~~grlVA 513 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDDF--I---------AEATPE--DKLALIRQEQAEGRLVA 513 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh-Cchhh--h---------hcCChH--HHHHHHHHHHhcCcEEE
Confidence 5689999999999999999999999998888888886 98876 2 224554 33455555555556678
Q ss_pred EEecCHhhHHHHHHcCCeEEEEeC
Q 020871 260 VVEDSVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 260 ~VGD~~~Dv~~a~~aG~~~v~v~~ 283 (320)
|.||+.||..+...|....+|..+
T Consensus 514 MtGDGTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 514 MTGDGTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred EcCCCCCcchhhhhcchhhhhccc
Confidence 999999999999999988766543
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0044 Score=63.68 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=31.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~ 215 (320)
++.+|+.+.++.|++.|+++.++|+........+...
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 6899999999999999999999999887666555443
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.016 Score=59.43 Aligned_cols=41 Identities=12% Similarity=0.228 Sum_probs=37.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+-
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~-gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAREC-GIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCC
Confidence 58899999999999999999999999999888888887 773
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.12 Score=42.11 Aligned_cols=40 Identities=15% Similarity=0.113 Sum_probs=30.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l 219 (320)
.++.||+.+.+..|... ..-+++|.+..+++......+ |+
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~i-g~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMI-GV 121 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhc-CC
Confidence 57999999999999887 556677777777776666554 55
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.011 Score=51.86 Aligned_cols=96 Identities=21% Similarity=0.213 Sum_probs=64.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchh------------hHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS------------SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~------------~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~ 246 (320)
.++|.+..=|..|.+.||.+++.||.... -+..+++.+ ++. |....+...-...||..-+++.
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl-~vP----i~~~~A~~~~~yRKP~tGMwe~ 178 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL-GVP----IQLLAAIIKGKYRKPSTGMWEF 178 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc-CCc----eEEeeeccCCcccCcchhHHHH
Confidence 36777778888899999999999987521 122233332 332 3333333344678999999999
Q ss_pred HHHHcC----CCCCCEEEEecC---------------HhhHHHHHHcCCeEE
Q 020871 247 AAKRLG----ISEKDCLVVEDS---------------VIGLQAATRAGMACV 279 (320)
Q Consensus 247 ~~~~l~----~~~~~~v~VGD~---------------~~Dv~~a~~aG~~~v 279 (320)
.++..+ +.-..++||||- ..|...|.++|+...
T Consensus 179 ~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 179 LKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 998765 334456688873 248899999997653
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.1 Score=49.53 Aligned_cols=27 Identities=15% Similarity=0.179 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAAT 205 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~ 205 (320)
++..++...|+.||.+|++++.+|+..
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDK 684 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDK 684 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcc
Confidence 577899999999999999999998764
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.0069 Score=47.55 Aligned_cols=84 Identities=23% Similarity=0.343 Sum_probs=57.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCC-ccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM-ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l-~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
+.++||+.++|+.+.+. +.+++.|.+....+..+++.+ .- ..+ |+.++..++....+.. +..-++.+|-+.+
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~l-dp~~~~--~~~~~~r~~~~~~~~~---~~KdL~~l~~~~~ 107 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDAL-DPNGKL--FSRRLYRDDCTFDKGS---YIKDLSKLGRDLD 107 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHH-TTTTSS--EEEEEEGGGSEEETTE---EE--GGGSSS-GG
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhh-hhhccc--cccccccccccccccc---cccchHHHhhccc
Confidence 57899999999999666 999999999999999999887 43 445 7877776544311110 1134555677789
Q ss_pred CEEEEecCHhhH
Q 020871 257 DCLVVEDSVIGL 268 (320)
Q Consensus 257 ~~v~VGD~~~Dv 268 (320)
++|+|+|++.-.
T Consensus 108 ~vvivDD~~~~~ 119 (159)
T PF03031_consen 108 NVVIVDDSPRKW 119 (159)
T ss_dssp GEEEEES-GGGG
T ss_pred cEEEEeCCHHHe
Confidence 999999999744
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.032 Score=56.47 Aligned_cols=38 Identities=18% Similarity=0.150 Sum_probs=31.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~ 216 (320)
++-.||.+.+..|+++|+|++++|+...+.+..+....
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC 688 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSC 688 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhh
Confidence 68889999999999999999999988766555554443
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.036 Score=46.32 Aligned_cols=102 Identities=20% Similarity=0.207 Sum_probs=57.9
Q ss_pred HHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeC----CCC----CCCCCC
Q 020871 169 YQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG----DDV----KQKKPD 240 (320)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~----~~~----~~~KP~ 240 (320)
..+.+....+.+++|+.++++.|.++++++.|+|.+-...++.++++. +.-.- --.|++- ++- +-..|-
T Consensus 80 i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~-~~~~~--Nv~VvSN~M~Fd~~g~l~gF~~~l 156 (246)
T PF05822_consen 80 IEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQA-GVFHP--NVKVVSNFMDFDEDGVLVGFKGPL 156 (246)
T ss_dssp HHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHT-T--BT--TEEEEEE-EEE-TTSBEEEE-SS-
T ss_pred HHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHc-CCCCC--CeEEEeeeEEECCcceEeecCCCc
Confidence 444455667889999999999999999999999999999999999886 43211 1122221 110 111121
Q ss_pred HHHHHH---HH------HHcCCCCCCEEEEecCHhhHHHHHHc
Q 020871 241 PSIYVT---AA------KRLGISEKDCLVVEDSVIGLQAATRA 274 (320)
Q Consensus 241 ~~~~~~---~~------~~l~~~~~~~v~VGD~~~Dv~~a~~a 274 (320)
-..|.. ++ +.+. ...+++..||+..|+.|+..+
T Consensus 157 IH~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 157 IHTFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp --TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-
T ss_pred eEEeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCC
Confidence 111111 11 1222 346799999999999999877
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.023 Score=42.48 Aligned_cols=85 Identities=19% Similarity=0.192 Sum_probs=50.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCC--chhhHHHHHHHhhCCccccC-cceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAA--TKSSVILCLENLIGMERFEG-LDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~--~~~~~~~~l~~~~~l~~~~~-fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
+...|++.+.+++|.+. +.++|+|.. -........+.+...-.|.. -..|+|+. | |+-
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn-----K-------------niv 127 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN-----K-------------NIV 127 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC-----C-------------CeE
Confidence 47899999999999998 899999977 34444444444321111111 23455542 1 111
Q ss_pred CCCEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 255 EKDCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
.-=++|+|++..++... |++ +++....
T Consensus 128 -kaDilIDDnp~nLE~F~--G~k-IlFdA~H 154 (180)
T COG4502 128 -KADILIDDNPLNLENFK--GNK-ILFDAHH 154 (180)
T ss_pred -EeeEEecCCchhhhhcc--Cce-EEEeccc
Confidence 11267999999888775 444 4444433
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.06 Score=44.48 Aligned_cols=66 Identities=12% Similarity=0.069 Sum_probs=55.5
Q ss_pred hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 217 IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 217 ~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
++++.++..+.|+++-.++ | ...|+.+.+++|-+...-++|||+..--.+|+..+|+++-+.....
T Consensus 196 y~L~~~f~ieNIYSa~kvG--K--~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~D 261 (274)
T TIGR01658 196 FRLDTIFRIENVYSSIKVG--K--LQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPD 261 (274)
T ss_pred hccCCccccccccchhhcc--h--HHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCC
Confidence 5889988888888886654 3 4599999999998778889999999999999999999988866543
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.054 Score=46.45 Aligned_cols=90 Identities=18% Similarity=0.170 Sum_probs=51.5
Q ss_pred CCChhHHHHHHHHHHC----CCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 179 EPRPGVLRLMDEAKAA----GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~----g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
.+.||+.+.|+.|.++ .++...+||+..-.-....+++ ... .+.-+..+++-.... .|+.+. ++ .
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l---S~~--Lgv~Vs~dqviqSHs---P~r~l~-~~--~ 119 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL---SAL--LGVEVSADQVIQSHS---PFRLLV-EY--H 119 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH---HHh--hCCccCHHHHHhhcC---hHHHHh-hh--h
Confidence 4667777777778777 7899999998754333222222 221 122222222211111 344444 22 3
Q ss_pred CCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 255 EKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
-++++++|++. -.+.|+..|.+-|.
T Consensus 120 ~k~vLv~G~~~-vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 120 YKRVLVVGQGS-VREVAEGYGFKNVV 144 (389)
T ss_pred hceEEEecCCc-HHHHhhccCcccee
Confidence 47899999665 36778889987654
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.11 Score=44.11 Aligned_cols=103 Identities=12% Similarity=0.155 Sum_probs=61.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEEeCCCC--------CCCC---CCHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDV--------KQKK---PDPSIYV 245 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~--------~~~K---P~~~~~~ 245 (320)
.++||+.++++.|++.|++++++||+.........+++ .|++-- .+.++++... ...+ .-...+.
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~--~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~ 94 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP--DSVFYTSAMATADFLRRQEGKKAYVIGEGALI 94 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC--HhhEecHHHHHHHHHHhCCCCEEEEEcCHHHH
Confidence 68999999999999999999999999876555555554 255322 3555555210 0000 0012344
Q ss_pred HHHHHcCCC----CCCEEEEecCHh-hHHHHH------HcCCeEEEEeC
Q 020871 246 TAAKRLGIS----EKDCLVVEDSVI-GLQAAT------RAGMACVITYT 283 (320)
Q Consensus 246 ~~~~~l~~~----~~~~v~VGD~~~-Dv~~a~------~aG~~~v~v~~ 283 (320)
..++..|+. ..++|+||...+ +..... ..|...+..|.
T Consensus 95 ~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~ 143 (248)
T PRK10444 95 HELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNP 143 (248)
T ss_pred HHHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECC
Confidence 444554543 236788887764 433322 34777666553
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.058 Score=44.71 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=62.3
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeC----CCCC----CCCCCHHH----
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG----DDVK----QKKPDPSI---- 243 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~----~~~~----~~KP~~~~---- 243 (320)
..+.+..|+.+++..|+.+++++.++|.+--..++..+.+..++-.. ..+++- ++.+ -.+|--..
T Consensus 135 s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn---~k~vSN~~~F~edg~l~gF~~~Lihtfnkn 211 (298)
T KOG3128|consen 135 SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPN---VKFVSNYMDFDEDGNLCGFSQPLIHTFNKN 211 (298)
T ss_pred hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCcc---HHhhhhhhhhcccchhhhhhHHHHHHHccc
Confidence 44567889999999999999999999999988888888775344322 222221 1111 11221111
Q ss_pred ---HHHHHHHcC--CCCCCEEEEecCHhhHHHHHHc
Q 020871 244 ---YVTAAKRLG--ISEKDCLVVEDSVIGLQAATRA 274 (320)
Q Consensus 244 ---~~~~~~~l~--~~~~~~v~VGD~~~Dv~~a~~a 274 (320)
.+...+.+. -....+++.||+..|+.|+..+
T Consensus 212 ~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 212 SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred hHHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 122222222 3457899999999999999876
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.2 Score=42.61 Aligned_cols=45 Identities=9% Similarity=-0.035 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcC---CeEEEEeCC
Q 020871 240 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG---MACVITYTS 284 (320)
Q Consensus 240 ~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG---~~~v~v~~~ 284 (320)
+...+..+++++.....-+++.||...|=.+...+. -.+|.+..+
T Consensus 183 KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~ 230 (266)
T COG1877 183 KGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG 230 (266)
T ss_pred hHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC
Confidence 566778888887766667999999998777777665 445555444
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.22 Score=45.97 Aligned_cols=91 Identities=11% Similarity=-0.050 Sum_probs=51.8
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc------eEEeCCCCCCCCCCHHH-HHHHHHHcCCCCCCEE
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD------CFLAGDDVKQKKPDPSI-YVTAAKRLGISEKDCL 259 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd------~v~~~~~~~~~KP~~~~-~~~~~~~l~~~~~~~v 259 (320)
.++..+..| +++++|...+.+++..+++..|.+..-+-+ ..+++-- .++...+. ...+.+.+|- ....+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~--~G~n~~ek~~~rl~~~~g~-~~~~v 176 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFI--RGTDVDQSVANRVANLFVD-ERPQL 176 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEE--ecCccHHHHHHHHHHHhCc-cCcee
Confidence 445567778 999999999999999998844654331111 1111110 12222333 3344444663 24578
Q ss_pred EEecCHhhHHHHHHcCCeEEEEeC
Q 020871 260 VVEDSVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 260 ~VGD~~~Dv~~a~~aG~~~v~v~~ 283 (320)
-+||+..|-....- |+.+.+..
T Consensus 177 g~~~~~~~~~f~~~--ck~~~~~~ 198 (498)
T PLN02499 177 GLGRISASSSFLSL--CKEQIHPP 198 (498)
T ss_pred cccCCcccchhhhh--CceEEecC
Confidence 88888866665554 44555533
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.68 Score=38.91 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=48.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHH
Q 020871 195 GKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT 272 (320)
Q Consensus 195 g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~ 272 (320)
-++++++|..+....++.++.+ +|+. +|..+.- .+-|+.. +++.++ |. |||+|....++.|.
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~----vDEafFL----gG~~K~~----vL~~~~--ph--IFFDDQ~~H~~~a~ 249 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR----VDEAFFL----GGLPKGP----VLKAFR--PH--IFFDDQDGHLESAS 249 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc----HhHHHHh----CCCchhH----HHHhhC--CC--EeecCchhhhhHhh
Confidence 4789999988765556665554 2543 3422221 1333333 445544 22 89999999999998
Q ss_pred HcCCeEEEEeCCCC
Q 020871 273 RAGMACVITYTSST 286 (320)
Q Consensus 273 ~aG~~~v~v~~~~~ 286 (320)
.+++++.|+.+..
T Consensus 250 -~~vps~hVP~gv~ 262 (264)
T PF06189_consen 250 -KVVPSGHVPYGVA 262 (264)
T ss_pred -cCCCEEeccCCcC
Confidence 8888888877653
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.42 Score=42.26 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=34.9
Q ss_pred CccEEEEecCCccccch------HHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHH
Q 020871 66 SLQALIFDCDGVIIESE------HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 121 (320)
.+++|.||=|+|||+.. ..+...+..+++ .|+.....++..|.....+++.+...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~~RL~GL 206 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYEERLHGL 206 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHHHHHHHH
Confidence 89999999999999753 334444444443 35555555555666666666665433
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >CHL00162 thiG thiamin biosynthesis protein G; Validated | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.81 Score=38.29 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=73.0
Q ss_pred CCCChhHHHHHH---HHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~---~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
..++|+..++++ .|-+.|+.+..+++.+.... +.|++. |.......-.-+++ +.+-.++..++.+++...++
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a-~rLed~-Gc~aVMPlgsPIGS---g~Gl~n~~~l~~i~e~~~vp 191 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLA-KHLEDI-GCATVMPLGSPIGS---GQGLQNLLNLQIIIENAKIP 191 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHH-HHHHHc-CCeEEeeccCcccC---CCCCCCHHHHHHHHHcCCCc
Confidence 357888877776 57788999999999887744 455565 65433222222222 45667888999998877653
Q ss_pred CCCEEEEecCH---hhHHHHHHcCCeEEEEeCCCCc
Q 020871 255 EKDCLVVEDSV---IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 255 ~~~~v~VGD~~---~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
|++|-+. +|+..|-+.|+..|+++++...
T Consensus 192 ----VivdAGIgt~sDa~~AmElGaDgVL~nSaIak 223 (267)
T CHL00162 192 ----VIIDAGIGTPSEASQAMELGASGVLLNTAVAQ 223 (267)
T ss_pred ----EEEeCCcCCHHHHHHHHHcCCCEEeecceeec
Confidence 6788776 6999999999999999988653
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.73 Score=43.58 Aligned_cols=92 Identities=21% Similarity=0.281 Sum_probs=52.9
Q ss_pred ChhHHHHHHHHHHCCCcEEEEeCCchh---hHHHHHHHhh--CCccccCcc-eEEeC---------CCCCCCCCCHHHHH
Q 020871 181 RPGVLRLMDEAKAAGKKVAVCSAATKS---SVILCLENLI--GMERFEGLD-CFLAG---------DDVKQKKPDPSIYV 245 (320)
Q Consensus 181 ~~g~~~~l~~L~~~g~~i~i~Tn~~~~---~~~~~l~~~~--~l~~~~~fd-~v~~~---------~~~~~~KP~~~~~~ 245 (320)
.-||..+....+++||++..+|...-. ..+..|+.+. |- .+ .| -|+.+ .++-..||+ -|+
T Consensus 560 h~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~-~L--PdGPViLSPd~lf~Al~REVI~RkPe--~FK 634 (738)
T KOG2116|consen 560 HTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGK-KL--PDGPVILSPDSLFAALHREVIERKPE--VFK 634 (738)
T ss_pred hhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCc-cC--CCCCEEeCCCcchHHHHHHHHHcCch--hhh
Confidence 347888888899999999999976532 2223333321 11 11 22 22222 223456665 333
Q ss_pred HHH-----HHcCCCC-CCEEEEecCHhhHHHHHHcCCe
Q 020871 246 TAA-----KRLGISE-KDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 246 ~~~-----~~l~~~~-~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
-+| +.+.-.. .=..-||++.+|+..-+.+|++
T Consensus 635 IAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP 672 (738)
T KOG2116|consen 635 IACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVP 672 (738)
T ss_pred HHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCC
Confidence 333 2333111 2355799999999999999986
|
|
| >PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.59 Score=38.60 Aligned_cols=100 Identities=14% Similarity=0.126 Sum_probs=62.6
Q ss_pred CCCChhHHHHHH---HHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~---~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
..++|+..++++ .|-+.|+.+.-+++.+.... +.|++. |..-....-.-++ .+.+--++..++.++++.+++
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a-krL~d~-GcaavMPlgsPIG---Sg~Gi~n~~~l~~i~~~~~vP 177 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLA-KRLEDA-GCAAVMPLGSPIG---SGRGIQNPYNLRIIIERADVP 177 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHH-HHHHHT-T-SEBEEBSSSTT---T---SSTHHHHHHHHHHGSSS
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHH-HHHHHC-CCCEEEecccccc---cCcCCCCHHHHHHHHHhcCCc
Confidence 357788877776 57889999999999887744 455665 6554311111111 245667788999999999875
Q ss_pred CCCEEEEecCH---hhHHHHHHcCCeEEEEeCCCC
Q 020871 255 EKDCLVVEDSV---IGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 255 ~~~~v~VGD~~---~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
|+|+-+. +|...|-+.|+..|++|+...
T Consensus 178 ----vIvDAGiG~pSdaa~AMElG~daVLvNTAiA 208 (247)
T PF05690_consen 178 ----VIVDAGIGTPSDAAQAMELGADAVLVNTAIA 208 (247)
T ss_dssp ----BEEES---SHHHHHHHHHTT-SEEEESHHHH
T ss_pred ----EEEeCCCCCHHHHHHHHHcCCceeehhhHHh
Confidence 5677665 699999999999999987643
|
ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=93.77 E-value=1.3 Score=45.15 Aligned_cols=50 Identities=14% Similarity=0.003 Sum_probs=38.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCE-EEEecCHh-hHHHHHHcCCeEEEEeC
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDC-LVVEDSVI-GLQAATRAGMACVITYT 283 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~-v~VGD~~~-Dv~~a~~aG~~~v~v~~ 283 (320)
++..-.+...+.++..++|++.+++ |++||+.| |++....--..+|.+.+
T Consensus 951 lP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 951 IPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred eeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 3455566789999999999999999 55999999 98877444345665544
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.48 E-value=1.1 Score=38.36 Aligned_cols=96 Identities=17% Similarity=0.213 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
.+.||+.++++.|++.|..+.++||++....+...++. .|+..+ ..+++ .-|.-....++-+.. -..+
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v-------~e~~i--~ssa~~~a~ylk~~~-~~~k 107 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSV-------KEENI--FSSAYAIADYLKKRK-PFGK 107 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcccc-------Ccccc--cChHHHHHHHHHHhC-cCCC
Confidence 69999999999999999999999999977666655543 244432 11111 123333333333333 3346
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
.+.++|-..- -+.++++|..+.......
T Consensus 108 ~Vyvig~~gi-~~eL~~aG~~~~g~~~~~ 135 (306)
T KOG2882|consen 108 KVYVIGEEGI-REELDEAGFEYFGGGPDG 135 (306)
T ss_pred eEEEecchhh-hHHHHHcCceeecCCCCc
Confidence 7777776664 366778898776554433
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.17 Score=44.94 Aligned_cols=101 Identities=15% Similarity=0.183 Sum_probs=73.3
Q ss_pred ChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhC--CccccCcceEEeCC---------------CCCC-------
Q 020871 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG--MERFEGLDCFLAGD---------------DVKQ------- 236 (320)
Q Consensus 181 ~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~--l~~~~~fd~v~~~~---------------~~~~------- 236 (320)
.+....+|..+++.|.+..+.||++-.........+.+ +..+ ||.++... +...
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~y--fd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~ 277 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETY--FDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGD 277 (424)
T ss_pred cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCccee--EEEEEEeccCCccccccceeeeeccccccccccc
Confidence 44556699999999999999999998888888877644 5666 66665542 0111
Q ss_pred --------CCCCHHHHHHHHHHcCCCCCCEEEEecCHh-hHHHH-HHcCCeEEEEeC
Q 020871 237 --------KKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAA-TRAGMACVITYT 283 (320)
Q Consensus 237 --------~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~-Dv~~a-~~aG~~~v~v~~ 283 (320)
+++.+...+.++..+++.-.+++++||+.. |+.-- +.-||.+++|-.
T Consensus 278 ~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 278 NTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred cCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 233445677888888888899999999995 76544 456888777644
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.81 Score=38.43 Aligned_cols=86 Identities=16% Similarity=0.209 Sum_probs=51.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHH---HHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC---LENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~---l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
.++|++.+.|..++++|+++.++||+........ +....|+.-- .+.++.+.. .....+++.+ +.
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~--~~~iits~~---------~~~~~l~~~~-~~ 81 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVS--PDQIITSGS---------VTKDLLRQRF-EG 81 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCC--HHHeeeHHH---------HHHHHHHHhC-CC
Confidence 5789999999999999999999998874444433 3332254422 555655422 2222222222 22
Q ss_pred CCEEEEecCHhhHHHHHHcCCe
Q 020871 256 KDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
..++++|.. ...+.++..|+.
T Consensus 82 ~~v~v~G~~-~~~~~l~~~g~~ 102 (236)
T TIGR01460 82 EKVYVIGVG-ELRESLEGLGFR 102 (236)
T ss_pred CEEEEECCH-HHHHHHHHcCCc
Confidence 457777753 345556666754
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.18 Score=42.72 Aligned_cols=102 Identities=18% Similarity=0.142 Sum_probs=60.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCc---hhhHHHHHHHhhCCccccCcceEEeCCCC-----CCCCCC-------HHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGMERFEGLDCFLAGDDV-----KQKKPD-------PSI 243 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~---~~~~~~~l~~~~~l~~~~~fd~v~~~~~~-----~~~KP~-------~~~ 243 (320)
.+.|++.++|+.|+++|++++++||+. .......++.+ |++.- .+.++++... ...++. .+.
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~-g~~~~--~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~ 93 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF-DIPAT--LETVFTASMATADYMNDLKLEKTVYVIGEEG 93 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCCC--hhhEeeHHHHHHHHHHhcCCCCEEEEEcChh
Confidence 467899999999999999999999855 45555566665 77643 5667665221 111111 123
Q ss_pred HHHHHHHcCCC----CCCEEEEecCH----hhHHHH---HHcCCeEEEEeC
Q 020871 244 YVTAAKRLGIS----EKDCLVVEDSV----IGLQAA---TRAGMACVITYT 283 (320)
Q Consensus 244 ~~~~~~~l~~~----~~~~v~VGD~~----~Dv~~a---~~aG~~~v~v~~ 283 (320)
+...++..|+. ..+.|++|... .++..+ ...|+..+..|.
T Consensus 94 l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~ 144 (249)
T TIGR01457 94 LKEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNG 144 (249)
T ss_pred HHHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECC
Confidence 55666666643 23567776643 133222 145777555443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.14 Score=43.64 Aligned_cols=50 Identities=24% Similarity=0.296 Sum_probs=37.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhh---HHHHHHHhhCCccccCcceEEeC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLAG 231 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~---~~~~l~~~~~l~~~~~fd~v~~~ 231 (320)
.++|++.+.|+.|+++|++++++||+.... ....++.+ |++-- .+.++++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~-g~~~~--~~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRL-GFDIS--EDEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHc-CCCCC--HHHeEcH
Confidence 489999999999999999999999987664 44455554 66522 4555554
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.064 Score=42.51 Aligned_cols=17 Identities=29% Similarity=0.739 Sum_probs=15.3
Q ss_pred CCccEEEEecCCccccc
Q 020871 65 QSLQALIFDCDGVIIES 81 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~ 81 (320)
..+|+++||+||||.|.
T Consensus 5 ~~i~~~v~d~dGv~tdg 21 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDG 21 (169)
T ss_pred ccCeEEEEeCceeeECC
Confidence 36999999999999986
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.083 Score=40.54 Aligned_cols=18 Identities=33% Similarity=0.767 Sum_probs=15.9
Q ss_pred CCccEEEEecCCccccch
Q 020871 65 QSLQALIFDCDGVIIESE 82 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~ 82 (320)
.++|++|||+||||+|..
T Consensus 6 ~~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 6 KNIKLLILDVDGVLTDGK 23 (170)
T ss_pred hhceEEEEeccceeecCe
Confidence 479999999999999863
|
|
| >COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.63 E-value=2.2 Score=35.20 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=72.2
Q ss_pred CCChhHHHHHH---HHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 179 EPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 179 ~~~~g~~~~l~---~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
.+.|+..++++ .|-+.|+.+..+++.+.-.. +.|+.. |.......-.-+++ +.+--++..++.++++..++
T Consensus 111 tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~a-rrLee~-GcaavMPl~aPIGS---g~G~~n~~~l~iiie~a~VP- 184 (262)
T COG2022 111 TLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLA-RRLEEA-GCAAVMPLGAPIGS---GLGLQNPYNLEIIIEEADVP- 184 (262)
T ss_pred ccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHH-HHHHhc-CceEeccccccccC---CcCcCCHHHHHHHHHhCCCC-
Confidence 57888888876 57778999999999887644 455554 65443222333333 44556788999999999875
Q ss_pred CCEEEEecCH---hhHHHHHHcCCeEEEEeCCCCc
Q 020871 256 KDCLVVEDSV---IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 256 ~~~v~VGD~~---~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
+.|+-+. +|...+-+.|+..|++|+....
T Consensus 185 ---viVDAGiG~pSdAa~aMElG~DaVL~NTAiA~ 216 (262)
T COG2022 185 ---VIVDAGIGTPSDAAQAMELGADAVLLNTAIAR 216 (262)
T ss_pred ---EEEeCCCCChhHHHHHHhcccceeehhhHhhc
Confidence 6677665 7999999999999999886543
|
|
| >PRK13762 tRNA-modifying enzyme; Provisional | Back alignment and domain information |
|---|
Probab=90.96 E-value=3 Score=36.84 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=28.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchh
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~ 207 (320)
+...++|.+.++++.+++.|+.+.+.||+...
T Consensus 139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 139 GEPTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred ccccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 45567899999999999999999999999763
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.86 E-value=1 Score=44.11 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=66.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCC----------------CCCHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK----------------KPDPS 242 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~----------------KP~~~ 242 (320)
+.+||+.+.++..+..|+.+-.+|+.+-...+.+..++ |+-.-.+=...+.+.+...- ...|.
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eC-GILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIAREC-GILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHc-ccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 67899999999999999999999999988888887776 76443110123333332210 01111
Q ss_pred HHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 243 ~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
--..+.+.+.-..+-+.+-||+.||..+.+.|.+...|--.|
T Consensus 726 DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaG 767 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAG 767 (1034)
T ss_pred hHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccc
Confidence 111222222212233456799999999999999887764333
|
|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
Probab=90.81 E-value=4.1 Score=35.63 Aligned_cols=101 Identities=15% Similarity=0.135 Sum_probs=68.8
Q ss_pred CCCChhHHHHHHHHHHC---CCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 178 VEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~---g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
..++|+..++++..+.. |+.+.++.+.+..... .+..+ |-..+...-..++ .+.+-.+|+.+..+++...+
T Consensus 177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~-~l~~~-g~~avmPl~~pIG---sg~gv~~p~~i~~~~e~~~v- 250 (326)
T PRK11840 177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAK-RLEDA-GAVAVMPLGAPIG---SGLGIQNPYTIRLIVEGATV- 250 (326)
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHhc-CCEEEeecccccc---CCCCCCCHHHHHHHHHcCCC-
Confidence 45789999999887777 9999555555555443 44454 4321111122222 23344588899999988554
Q ss_pred CCCEEEEecCH---hhHHHHHHcCCeEEEEeCCCCc
Q 020871 255 EKDCLVVEDSV---IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 255 ~~~~v~VGD~~---~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
-+++|-+. .|+..|-+.|...|+++++...
T Consensus 251 ---pVivdAGIg~~sda~~AmelGadgVL~nSaIa~ 283 (326)
T PRK11840 251 ---PVLVDAGVGTASDAAVAMELGCDGVLMNTAIAE 283 (326)
T ss_pred ---cEEEeCCCCCHHHHHHHHHcCCCEEEEcceecc
Confidence 37788876 6999999999999999998653
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.01 E-value=1.3 Score=35.83 Aligned_cols=38 Identities=24% Similarity=0.254 Sum_probs=33.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~ 216 (320)
...||+.+.|+.|+..+.++=.+||...+.-..+.+++
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 38899999999999999999999999887777666665
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=89.77 E-value=0.78 Score=39.44 Aligned_cols=43 Identities=21% Similarity=0.236 Sum_probs=37.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
...+++.++|+.|++.|++++++|+.....+...++.+ ++..+
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l-~l~~~ 63 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKEL-GLEDP 63 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCCC
Confidence 46678999999999999999999999998888888886 77644
|
|
| >PRK00208 thiG thiazole synthase; Reviewed | Back alignment and domain information |
|---|
Probab=89.04 E-value=7.5 Score=32.65 Aligned_cols=101 Identities=14% Similarity=0.112 Sum_probs=66.2
Q ss_pred CCCChhHHHHHHHHHHC---CCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 178 VEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~---g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
..++|+..++++..+.. |+.+.-+.+.+.... +.++.+ |.......-..+++. .+..+++.++.+.+..++
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~a-k~l~~~-G~~~vmPlg~pIGsg---~gi~~~~~i~~i~e~~~v- 176 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLA-KRLEEA-GCAAVMPLGAPIGSG---LGLLNPYNLRIIIEQADV- 176 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHc-CCCEeCCCCcCCCCC---CCCCCHHHHHHHHHhcCC-
Confidence 35788998888887777 999983444444434 455554 544331111223322 334457788888776544
Q ss_pred CCCEEEEecCH---hhHHHHHHcCCeEEEEeCCCCc
Q 020871 255 EKDCLVVEDSV---IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 255 ~~~~v~VGD~~---~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
.|++|-+. .|+..+-+.|...|+++++...
T Consensus 177 ---pVIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 177 ---PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred ---eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 47777766 5999999999999999888654
|
|
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=88.90 E-value=9.2 Score=32.08 Aligned_cols=101 Identities=16% Similarity=0.140 Sum_probs=67.1
Q ss_pred CCCChhHHHHHHHHHHC---CCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 178 VEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~---g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
..++|+..++++..+.. |+.+..+.+.+.... +.+..+ |.......-..+++ +.+..+++.+..+.+..++
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~a-r~l~~~-G~~~vmPlg~pIGs---g~Gi~~~~~I~~I~e~~~v- 176 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLA-KRLEDA-GCAAVMPLGSPIGS---GQGLLNPYNLRIIIERADV- 176 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHc-CCCEeCCCCcCCCC---CCCCCCHHHHHHHHHhCCC-
Confidence 35889999999887777 999984555555544 345554 54433111122222 2344458888888776543
Q ss_pred CCCEEEEecCH---hhHHHHHHcCCeEEEEeCCCCc
Q 020871 255 EKDCLVVEDSV---IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 255 ~~~~v~VGD~~---~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
.|++|-+. .|+..+-+.|...|++++....
T Consensus 177 ---pVI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 177 ---PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred ---cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 36677665 6999999999999999887654
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=88.34 E-value=2.2 Score=37.63 Aligned_cols=85 Identities=14% Similarity=0.081 Sum_probs=56.0
Q ss_pred CCChhHHHHHHHHHHC----CCcEEEEeCCch---hhHHHHH-HHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAA----GKKVAVCSAATK---SSVILCL-ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR 250 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~----g~~i~i~Tn~~~---~~~~~~l-~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~ 250 (320)
.+.||+.++++.|+.. |+++.++||+.. ......+ +.+ |+.-- .+.++.+. ......+++
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l-G~~~~--~~~i~~s~---------~~~~~ll~~ 83 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL-GVDVS--PLQVIQSH---------SPYKSLVNK 83 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc-CCCCC--HHHHHhhh---------HHHHHHHHH
Confidence 5799999999999998 999999999973 3222333 444 66422 34444331 133444455
Q ss_pred cCCCCCCEEEEecCHhhHHHHHHcCCeEE
Q 020871 251 LGISEKDCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 251 l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
++ ..+++||.+. -.+.++.+|+..+
T Consensus 84 ~~---~~v~viG~~~-~~~~l~~~G~~~v 108 (321)
T TIGR01456 84 YE---KRILAVGTGS-VRGVAEGYGFQNV 108 (321)
T ss_pred cC---CceEEEeChH-HHHHHHHcCCccc
Confidence 43 3688899765 4677778998765
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.06 E-value=2 Score=38.75 Aligned_cols=28 Identities=11% Similarity=0.094 Sum_probs=20.5
Q ss_pred HcCCCCCC-EEEEecCHhhHHHHHHcCCe
Q 020871 250 RLGISEKD-CLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 250 ~l~~~~~~-~v~VGD~~~Dv~~a~~aG~~ 277 (320)
.+...+.- ..-||+...|+..-++.|++
T Consensus 488 slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 488 SLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HhhCcCChhhccccccchhheeeccccCC
Confidence 34444442 33689999999999999986
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.82 E-value=0.55 Score=40.52 Aligned_cols=53 Identities=23% Similarity=0.243 Sum_probs=38.9
Q ss_pred CCCCCCHHHHHHHHHHc--------CC-CCCCEEEEecCH-hhHHHHH---------------HcCCeEEEEeCCCCc
Q 020871 235 KQKKPDPSIYVTAAKRL--------GI-SEKDCLVVEDSV-IGLQAAT---------------RAGMACVITYTSSTA 287 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l--------~~-~~~~~v~VGD~~-~Dv~~a~---------------~aG~~~v~v~~~~~~ 287 (320)
..+||.+-.|+++...+ +. ++....||||++ .|+.+|. +-||..|+|..|...
T Consensus 268 t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~ 345 (389)
T KOG1618|consen 268 TLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN 345 (389)
T ss_pred ccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence 46889887777654322 23 457889999999 6999996 678888888766544
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=87.54 E-value=0.28 Score=38.29 Aligned_cols=15 Identities=33% Similarity=0.764 Sum_probs=12.1
Q ss_pred cEEEEecCCccccch
Q 020871 68 QALIFDCDGVIIESE 82 (320)
Q Consensus 68 k~viFD~DGTL~d~~ 82 (320)
|++|||+||||+.+.
T Consensus 1 k~LVlDLD~TLv~~~ 15 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSS 15 (159)
T ss_dssp EEEEEE-CTTTEEEE
T ss_pred CEEEEeCCCcEEEEe
Confidence 689999999999764
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.70 E-value=2.2 Score=36.46 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=36.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
.+.+...+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~ 60 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKEL-HME 60 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHh-CCC
Confidence 46778899999999999999999999998888888886 765
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.43 E-value=2.6 Score=41.39 Aligned_cols=39 Identities=8% Similarity=0.185 Sum_probs=33.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~ 216 (320)
.++-|++++.++.|...+++++.+|+.+.-..-++.+++
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v 712 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEV 712 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehhee
Confidence 468899999999999999999999999877666666654
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=85.96 E-value=1.9 Score=35.50 Aligned_cols=41 Identities=12% Similarity=0.085 Sum_probs=36.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
.+.|...+.|++|++.|++++++|+.....+...++.+ ++.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l-~~~ 58 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLI-GTS 58 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHh-CCC
Confidence 57789999999999999999999999998888887776 665
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=85.58 E-value=1.5 Score=44.30 Aligned_cols=39 Identities=10% Similarity=0.120 Sum_probs=32.4
Q ss_pred CCCChhHHHHHHHHHHC-CCcEEEEeCCchhhHHHHHHHh
Q 020871 178 VEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENL 216 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~-g~~i~i~Tn~~~~~~~~~l~~~ 216 (320)
..+.|++.++|+.|.+. +..++|+|+.+...++..+...
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 35788999999999876 6789999999998888777553
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=85.48 E-value=2.1 Score=35.72 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=35.4
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
..++..+.|++|+++|++++++|+.....+...++.+ |+..
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~l-g~~~ 56 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREEL-GVEP 56 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCCC
Confidence 5567899999999999999999999988888888886 7643
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=85.17 E-value=3.3 Score=39.68 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=53.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
++++|++.++|+.+.+. +.++|+|-+.+.++..+++-+=.-..||+ |.|++.++-+..| ........|..
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~-dRIisrde~~~~k--------t~dL~~~~p~g 269 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFG-DRIISRDESPFFK--------TLDLVLLFPCG 269 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCcccc-ceEEEecCCCccc--------ccccccCCCCC
Confidence 68999999999999988 99999999999998888776612234422 6677776643333 22222233333
Q ss_pred ---EEEEecCHh
Q 020871 258 ---CLVVEDSVI 266 (320)
Q Consensus 258 ---~v~VGD~~~ 266 (320)
++.|+|+.+
T Consensus 270 ~smvvIIDDr~d 281 (635)
T KOG0323|consen 270 DSMVVIIDDRSD 281 (635)
T ss_pred CccEEEEeCccc
Confidence 777777764
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.25 E-value=2.8 Score=34.77 Aligned_cols=42 Identities=10% Similarity=0.071 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.+.|...+.|.+|+++|++++++|+.....+...++.+ ++..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~ 61 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLI-GTSG 61 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh-CCCC
Confidence 46788999999999999999999999998888777776 7654
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=84.20 E-value=2.4 Score=35.01 Aligned_cols=40 Identities=20% Similarity=0.304 Sum_probs=34.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
..+...+.|+.|+++|++++++||.....+...++.+ ++.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l-~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKAL-GLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCC
Confidence 3444789999999999999999999999999899887 765
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=84.06 E-value=23 Score=29.45 Aligned_cols=81 Identities=21% Similarity=0.332 Sum_probs=51.8
Q ss_pred CCcEEEEeCCch---hhHHHHHHHhhCCccccCcceE-EeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH--hhH
Q 020871 195 GKKVAVCSAATK---SSVILCLENLIGMERFEGLDCF-LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV--IGL 268 (320)
Q Consensus 195 g~~i~i~Tn~~~---~~~~~~l~~~~~l~~~~~fd~v-~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~--~Dv 268 (320)
++.+-+++.+.. +.++...... +..| ..|.+ +.|-.- .-|-|..-+.+++.-|++ |++|||.+ .+.
T Consensus 31 dI~vrv~gsGaKm~pe~~~~~~~~~--~~~~-~pDf~i~isPN~--a~PGP~~ARE~l~~~~iP---~IvI~D~p~~K~~ 102 (277)
T PRK00994 31 DIDVRVVGSGAKMGPEEVEEVVKKM--LEEW-KPDFVIVISPNP--AAPGPKKAREILKAAGIP---CIVIGDAPGKKVK 102 (277)
T ss_pred CceEEEeccCCCCCHHHHHHHHHHH--HHhh-CCCEEEEECCCC--CCCCchHHHHHHHhcCCC---EEEEcCCCccchH
Confidence 678888887753 3233222221 1222 13433 334322 345566788899888884 89999999 377
Q ss_pred HHHHHcCCeEEEEeC
Q 020871 269 QAATRAGMACVITYT 283 (320)
Q Consensus 269 ~~a~~aG~~~v~v~~ 283 (320)
...+..|+..+.+..
T Consensus 103 d~l~~~g~GYIivk~ 117 (277)
T PRK00994 103 DAMEEQGLGYIIVKA 117 (277)
T ss_pred HHHHhcCCcEEEEec
Confidence 889999999888754
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=83.63 E-value=2.7 Score=35.62 Aligned_cols=41 Identities=20% Similarity=0.323 Sum_probs=35.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
.+.+...+.|++|+++|++++++|+.....+...++.+ ++.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~-~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKEL-GLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCC
Confidence 46788899999999999999999999988888888776 665
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=83.10 E-value=3.4 Score=35.78 Aligned_cols=42 Identities=10% Similarity=0.090 Sum_probs=36.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
..++.+.+.|++|+++|++++++|+.....+....+.+ ++..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~L-gl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQL-RLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh-CCCC
Confidence 46677899999999999999999999999888888887 7764
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.44 E-value=3 Score=35.75 Aligned_cols=42 Identities=7% Similarity=0.076 Sum_probs=36.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.+.+...+.|++|+++|++++++|+.....+...++.+ ++..
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~ 60 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGAL-SLDA 60 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCCC
Confidence 57788899999999999999999999998888888886 7653
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.33 E-value=4.8 Score=32.49 Aligned_cols=28 Identities=14% Similarity=0.267 Sum_probs=20.9
Q ss_pred cEEEEecCCccccchHHHHHHHHHHHHh
Q 020871 68 QALIFDCDGVIIESEHLHRQAYNDAFSH 95 (320)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~~~~~~~~~ 95 (320)
-++.||+||||........+.+.+.+.+
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHH
Confidence 3789999999998876666666665554
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=82.16 E-value=3.3 Score=34.18 Aligned_cols=41 Identities=12% Similarity=0.144 Sum_probs=34.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
.+.+...+.|++|++.|++++++|+.....+...++.+ ++.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l-~~~ 55 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLI-GTP 55 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHh-CCC
Confidence 46678889999999999999999999998888887776 643
|
catalyze the same reaction as SPP. |
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.98 E-value=13 Score=27.68 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=52.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch-hhHHHHHHHhhCCcccc-------CcceEEeCCCCCCCCCCHHHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK-SSVILCLENLIGMERFE-------GLDCFLAGDDVKQKKPDPSIYVTAAK 249 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~-~~~~~~l~~~~~l~~~~-------~fd~v~~~~~~~~~KP~~~~~~~~~~ 249 (320)
...|+++...|..|++.|+.++++|++.. +.+...|+.+ .+.... .|+.+..++.. +-..|..+-+
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f-kvk~~Gvlkps~e~ft~~~~g~gs-----klghfke~~n 116 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF-KVKQTGVLKPSLEEFTFEAVGDGS-----KLGHFKEFTN 116 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh-ccCcccccchhhhcCceeeecCcc-----cchhHHHHhh
Confidence 57899999999999999999999998874 4444455543 443220 12222222221 1224455656
Q ss_pred HcCCCCCCEEEEecCHhh
Q 020871 250 RLGISEKDCLVVEDSVIG 267 (320)
Q Consensus 250 ~l~~~~~~~v~VGD~~~D 267 (320)
..|..-.+..++.|-..+
T Consensus 117 ~s~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 117 NSNSIEKNKQVFDDESRN 134 (144)
T ss_pred ccCcchhceeeecccccC
Confidence 666666677777776643
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.41 E-value=3.3 Score=35.28 Aligned_cols=42 Identities=14% Similarity=0.110 Sum_probs=36.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.+.+...+.|++++++|++++++|+.....+...++.+ ++..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~ 60 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNL-EIKS 60 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc-CCCC
Confidence 46778899999999999999999999998888888776 7653
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=81.25 E-value=2.8 Score=41.96 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=24.8
Q ss_pred CCChhHHHHHHHHHHC-CCcEEEEeCCchhhHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLEN 215 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~-g~~i~i~Tn~~~~~~~~~l~~ 215 (320)
.+.|++.++|+.|.+. +..++|+|+.+...++..+..
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 4566777777777664 566777777777666665543
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.73 E-value=3.7 Score=34.99 Aligned_cols=42 Identities=19% Similarity=0.309 Sum_probs=36.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.+.|...+.|++++++|++++++|+.....+...++.+ ++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l-~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQAL-ALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc-CCCC
Confidence 57788899999999999999999999988888888876 6653
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.62 E-value=1.7 Score=42.68 Aligned_cols=103 Identities=15% Similarity=0.207 Sum_probs=61.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc-------------------cc--Ccc-eEEeCCCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-------------------FE--GLD-CFLAGDDVKQ 236 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~-------------------~~--~fd-~v~~~~~~~~ 236 (320)
++...+.+.+...|+.|++++.+|+.-........+.. |+-. .. .-+ .|+.+.+..
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~v-gIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~- 667 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSV-GIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP- 667 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhhe-eeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-
Confidence 56778889999999999999999987665555554443 4210 00 001 112222211
Q ss_pred CCCCHHHHHHHHHHcC------CCCCC--------------EEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 237 KKPDPSIYVTAAKRLG------ISEKD--------------CLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 237 ~KP~~~~~~~~~~~l~------~~~~~--------------~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
--.++-++++++... .+|++ +-+.||+.||-.+.+.|.+..++--.|
T Consensus 668 -~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaG 734 (1019)
T KOG0203|consen 668 -DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAG 734 (1019)
T ss_pred -ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeecccc
Confidence 112234555554432 12222 447799999999999999998874444
|
|
| >TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH | Back alignment and domain information |
|---|
Probab=80.34 E-value=39 Score=29.77 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=28.0
Q ss_pred hCCCCCChhHHHHHHHHHHCCCcEEEEeCCch
Q 020871 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATK 206 (320)
Q Consensus 175 ~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~ 206 (320)
.+...++|++.++++.+++.|..+.++||+..
T Consensus 80 GGEPLL~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 80 GGEPLLHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred CccccccccHHHHHHHHHHcCCeEEEecCcee
Confidence 35567889999999999999999999999975
|
The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 320 | ||||
| 3e58_A | 214 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 5e-13 | ||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 3e-10 | ||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 6e-10 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 2e-09 | ||
| 3dv9_A | 247 | Putative Beta-Phosphoglucomutase From Bacteroides V | 4e-09 | ||
| 3quq_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 1e-08 | ||
| 3r9k_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 2e-08 | ||
| 3fm9_A | 221 | Analysis Of The Structural Determinants Underlying | 2e-08 | ||
| 3qyp_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 2e-08 | ||
| 1o03_A | 221 | Structure Of Pentavalent Phosphorous Intermediate O | 2e-08 | ||
| 1lvh_A | 221 | The Structure Of Phosphorylated Beta-phosphoglucomu | 2e-08 | ||
| 3qub_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 3e-08 | ||
| 3qu5_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-08 | ||
| 3qut_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-08 | ||
| 3qu4_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 1e-07 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 1e-07 | ||
| 3l5k_A | 250 | The Crystal Structure Of Human Haloacid Dehalogenas | 7e-07 | ||
| 2hi0_A | 240 | Crystal Structure Of Putative Phosphoglycolate Phos | 1e-05 | ||
| 2nyv_A | 222 | X-Ray Crystal Structure Of A Phosphoglycolate Phosp | 2e-05 | ||
| 4ex6_A | 237 | Crystal Structure Of The Alnumycin P Phosphatase Al | 2e-05 | ||
| 4eek_A | 259 | Crystal Structure Of Had Family Hydrolase Dr_1622 F | 3e-05 | ||
| 3d6j_A | 225 | Crystal Structure Of Putative Haloacid Dehalogenase | 7e-05 | ||
| 1te2_A | 226 | Putative Phosphatase Ynic From Escherichia Coli K12 | 7e-05 | ||
| 2yy6_A | 213 | Crystal Structure Of The Phosphoglycolate Phosphata | 8e-05 | ||
| 3s6j_A | 233 | The Crystal Structure Of A Hydrolase From Pseudomon | 2e-04 | ||
| 2no5_A | 240 | Crystal Structure Analysis Of A Dehalogenase With I | 3e-04 | ||
| 2no4_A | 240 | Crystal Structure Analysis Of A Dehalogenase Length | 3e-04 |
| >pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214 | Back alignment and structure |
|
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247 | Back alignment and structure |
|
| >pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221 | Back alignment and structure |
|
| >pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243 | Back alignment and structure |
|
| >pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221 | Back alignment and structure |
|
| >pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221 | Back alignment and structure |
|
| >pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243 | Back alignment and structure |
|
| >pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
| >pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250 | Back alignment and structure |
|
| >pdb|2HI0|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Yp_619066.1) From Lactobacillus Delbrueckii Subsp. Bulgaricus Atcc Baa-365 At 1.51 A Resolution Length = 240 | Back alignment and structure |
|
| >pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222 | Back alignment and structure |
|
| >pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237 | Back alignment and structure |
|
| >pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259 | Back alignment and structure |
|
| >pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225 | Back alignment and structure |
|
| >pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226 | Back alignment and structure |
|
| >pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213 | Back alignment and structure |
|
| >pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233 | Back alignment and structure |
|
| >pdb|2NO5|A Chain A, Crystal Structure Analysis Of A Dehalogenase With Intermediate Complex Length = 240 | Back alignment and structure |
|
| >pdb|2NO4|A Chain A, Crystal Structure Analysis Of A Dehalogenase Length = 240 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 1e-56
Identities = 50/249 (20%), Positives = 95/249 (38%), Gaps = 31/249 (12%)
Query: 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
++ + + A IFD DG++I+SE L +A D + V + + L +
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGV----------DISRR--NELPDT 51
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
+G + + P + ++++ R +++
Sbjct: 52 LGLRIDMVVDLWYAR----------QPWNGPSRQEVVE----RVIARAISLVEET-RPLL 96
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
PGV + K G V + SA+ + L + F D + + + KP P
Sbjct: 97 PGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF---DALASAEKLPYSKPHP 153
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPD 300
+Y+ A +LG+ C+ +EDSV G+ A+ A M + + + + F A
Sbjct: 154 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 213
Query: 301 LSNVRLKDL 309
L+ + KDL
Sbjct: 214 LTELTAKDL 222
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 2e-52
Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 40/248 (16%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+A++FD DGVI ++ H +A+ + D +F + L G
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGV---------DRQFNEQL-----KGV 47
Query: 127 PKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT-VEPRPG 183
+ + + V+ ++ +L K + Y ++I+ + + PG
Sbjct: 48 SREDSLQKILDLA--------DKKVSAEEFKELAK----RKNDNYVKMIQDVSPADVYPG 95
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
+L+L+ + ++ K+A+ SA+ +L NL F D +V KP P I
Sbjct: 96 ILQLLKDLRSNKIKIALASASKNGPFLLERMNL--TGYF---DAIADPAEVAASKPAPDI 150
Query: 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLS 302
++ AA +G++ + + +EDS G+QA +G + + +D D I I PD S
Sbjct: 151 FIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-----GRPEDLGDDIVIVPDTS 205
Query: 303 NVRLKDLE 310
+ L+ L+
Sbjct: 206 HYTLEFLK 213
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 3e-52
Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 36/250 (14%)
Query: 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
S+ ++A+IFD DGV+ ++E + + + D I
Sbjct: 1 SNAMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGI----------SIDHLPPSFF---I 47
Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
GG ++ + + +Q+ Q P
Sbjct: 48 GGNTKQVWENILRDEYDKWDV---------------STLQEEYNTYKQNNPLPYKELIFP 92
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
VL++++E K+ G ++ + S++ K+ + LE F D L+G++ K+ KP+P
Sbjct: 93 DVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF---DIVLSGEEFKESKPNPE 149
Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302
IY+TA K+L + L++EDS G+ A A + + D A + L+
Sbjct: 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWA-IRDNEFGMDQSAAKGLLDSLT 208
Query: 303 NVRLKDLELL 312
+V L+L+
Sbjct: 209 DV----LDLI 214
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 1e-51
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 36/251 (14%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG-GG 125
L+A++FD DGV+ S H +A++ L+ E + G G
Sbjct: 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHG----------LDLSREEAYMH---EGRTG 70
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+ F+ +T + I+ I K+ + + E PG
Sbjct: 71 ASTINIVFQRELGKEAT------------QEEIESIYHEKSILFNSYPE---AERMPGAW 115
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCL-ENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
L+ + K+ G V + + + S++ L N GM + + DVK KP+P Y
Sbjct: 116 ELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMFHK---ELMVTAFDVKYGKPNPEPY 172
Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLS 302
+ A K+ G+ + +V+E++ +G++A +AG+ + T Q DA A ++P +
Sbjct: 173 LMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQ 232
Query: 303 NVRLKDLELLL 313
+ + ++
Sbjct: 233 TL-CDSWDTIM 242
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 169 bits (429), Expect = 3e-51
Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 36/265 (13%)
Query: 52 SLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD 111
++ S L+A++FD DGV+ +S H ++++ F
Sbjct: 8 AINNYLHTHGYESIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGF----------GLS 57
Query: 112 PEFYDVLQNQIG-GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQ 170
E + G G + + +T + I+ + +
Sbjct: 58 REEAYMH---EGRTGASTINIVSRRERGHDATE---------------EEIKAIYQAKTE 99
Query: 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL-ENLIGMERFEGLDCFL 229
+ K E PG L ++ + K+ G V + + ++S++ L N G+ + + +
Sbjct: 100 EFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHNFPGIFQA---NLMV 156
Query: 230 AGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289
DVK KP+P Y+ A K+ G + LV+E++ +G+QA AG+ + T +
Sbjct: 157 TAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDN 216
Query: 290 DFKDAIA--IYPDLSNVRLKDLELL 312
+ A ++ + + K+ E L
Sbjct: 217 VLLNEGANLLFHSMPDFN-KNWETL 240
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 8e-51
Identities = 59/255 (23%), Positives = 96/255 (37%), Gaps = 37/255 (14%)
Query: 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG 123
LQ +IFD DGVI ++ HLH QA+ + + + D +F + L G
Sbjct: 2 VMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGI----------SIDAQFNESL---KG 48
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRP 182
+ + +HG ++A+L K Y ++ P
Sbjct: 49 ISRDESLRRILQHGGKE------GDFNSQERAQLAY----RKNLLYVHSLRELTVNAVLP 98
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
G+ L+ + +A V + S + + IL L E F +K KPDP
Sbjct: 99 GIRSLLADLRAQQISVGLASVSLNAPTILAALEL--REFF---TFCADASQLKNSKPDPE 153
Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDL 301
I++ A LG+ + C+ +ED+ G+ A +GM V I A + P
Sbjct: 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIG-------AGLTGAQLLLPST 206
Query: 302 SNVRLKDLELLLQNV 316
++ L QNV
Sbjct: 207 ESLTWPRLSAFWQNV 221
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 5e-50
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 37/252 (14%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
SL+A+IFD DGVI ++ H A+ ++ +D + + L G
Sbjct: 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDI----------PFDRDMNERL-----KG 45
Query: 126 KPKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII-KSGTVEPRP 182
+ G T+ ++ +L+ K YQ +I K + P
Sbjct: 46 ISREESLESILIFGGA------ETKYTNAEKQELMHR----KNRDYQMLISKLTPEDLLP 95
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
G+ RL+ + K K+ + S++ + IL + + + + + KPDP
Sbjct: 96 GIGRLLCQLKNENIKIGLASSSRNAPKIL---RRLAIIDD--FHAIVDPTTLAKGKPDPD 150
Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302
I++TAA L +S DC +ED+ G+ A AGM V Q A + S
Sbjct: 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV----GQGQPMLGADLVVRQTS 206
Query: 303 NVRLKDLELLLQ 314
++ L+ L +
Sbjct: 207 DLTLELLHEEWE 218
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 9e-50
Identities = 48/263 (18%), Positives = 103/263 (39%), Gaps = 40/263 (15%)
Query: 55 RKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF 114
++A Q + LIFD DG+++++E L+ + + + ++ + +
Sbjct: 18 LYFQSMAAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDK----------KYSWDV 67
Query: 115 YDVLQNQIGGGKPKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQI 172
++ GK + + P++ ++ + + + +++
Sbjct: 68 KSLVM-----GKKALEAAQIIIDVL--------QLPMSKEE-------LVEESQTKLKEV 107
Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD 232
T PG +L+ + G A+ +++ +S + F + GD
Sbjct: 108 FP--TAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEF--FSLFSHIVLGD 163
Query: 233 D--VKQKKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 288
D V+ KPDP I++ AKR + + CLV ED+ G++AA AGM V+ + +
Sbjct: 164 DPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSR 223
Query: 289 QDFKDAIAIYPDLSNVRLKDLEL 311
A + L + + + L
Sbjct: 224 DLTTKATLVLNSLQDFQPELFGL 246
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 5e-49
Identities = 47/258 (18%), Positives = 95/258 (36%), Gaps = 37/258 (14%)
Query: 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
S + + IFD DG + +S + + A+ +A N + +I
Sbjct: 2 SLRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAEN----------IPLAMWRI---HRKI 48
Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
G M +TD+ + + + + Y+++ + P
Sbjct: 49 GMSGGLMLKSLSRET--------GMSITDEQ----AERLSEKHAQAYERLQHQ--IIALP 94
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
G + L++ K + ++ + + L+ L + DDV KPDP
Sbjct: 95 GAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK---INIVTRDDVSYGKPDPD 151
Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC--VITYTSSTAEQDFKDAIAIYPD 300
+++ AAK++G +CLV+ D++ + AA R +++ E + A+ +Y D
Sbjct: 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED 211
Query: 301 LSNVRLKDLELLLQNVVA 318
DL L + +
Sbjct: 212 PL-----DLLNHLDEIAS 224
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 8e-45
Identities = 57/278 (20%), Positives = 98/278 (35%), Gaps = 55/278 (19%)
Query: 43 KSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDP 102
K+N + +++ LT K L S + A +FD DG II S+ + D
Sbjct: 16 KANIQTIAMPLTTKPL-----SLKINAALFDVDGTIIISQPAIAAFWRDFGKDKP----- 65
Query: 103 SSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD--NPPVTDDDQAKLIDL 160
+ HGW + P D++ ++
Sbjct: 66 -----YFDAEHVIHIS-----------------HGWRTYDAIAKFAPDFADEE---YVNK 100
Query: 161 IQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGM 219
++ E+Y + PG ++L + A +K AV ++ T+ + L +
Sbjct: 101 LEGEIPEKYGE-----HSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDIL-KI 154
Query: 220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK-------DCLVVEDSVIGLQAAT 272
+R + F+ +DVKQ KP P Y+ LG +V ED+ G+ A
Sbjct: 155 KRP---EYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGK 211
Query: 273 RAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 309
AG V I T K I + ++R+ +
Sbjct: 212 AAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEY 249
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 1e-41
Identities = 49/251 (19%), Positives = 85/251 (33%), Gaps = 37/251 (14%)
Query: 61 SASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN 120
S A++FD DGV++ESE + Q + + + D ++
Sbjct: 22 SMPDAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLH----------LDLT--EIAMY 69
Query: 121 QIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP 180
G + Y + + D +D+++ V
Sbjct: 70 FTGQRFDGVLAYLAQQH--------DFVPPPD----FLDVLETRFNAAMTG------VTA 111
Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPD 240
G + +AAG A+ S + + + L L + G+ G + + KP
Sbjct: 112 IEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR-VAGLTELAGEHIYDPSWVGGRGKPH 170
Query: 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD------A 294
P +Y AA++LGI + C+V+EDSV G A AG D A
Sbjct: 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGA 230
Query: 295 IAIYPDLSNVR 305
+ + +R
Sbjct: 231 ARVLTSHAELR 241
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 1e-38
Identities = 52/254 (20%), Positives = 88/254 (34%), Gaps = 43/254 (16%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+IFDCDGV+++SE + Q + + E + G
Sbjct: 4 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGY----------PISVEEM---GERFAGMT 50
Query: 127 PK--MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
K + E P A L+D + R ++ V+ GV
Sbjct: 51 WKNILLQVESEASIP-------------LSASLLDKSEKLLDMRLER-----DVKIIDGV 92
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM-ERFEGLDCFLAGDDVKQK--KPDP 241
+ +CS ++ + + L + G+ F + D+ KP P
Sbjct: 93 KFALSRLTT---PRCICSNSSSHRLDMMLTKV-GLKPYFAPH--IYSAKDLGADRVKPKP 146
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPD 300
I++ A + G+S +VVEDSV G+ A AGM + T S T +
Sbjct: 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAE 206
Query: 301 LSNVRLKDLELLLQ 314
R++DL ++
Sbjct: 207 TVISRMQDLPAVIA 220
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 8e-35
Identities = 48/255 (18%), Positives = 91/255 (35%), Gaps = 21/255 (8%)
Query: 67 LQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
++ALI D G I+ L A+ + F + + + + + ++ +G
Sbjct: 14 VEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEK-SEHIRRMLGNS 72
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+ W ++D +L DL +T Q + PG
Sbjct: 73 RIANAWLSI----------KGQASNEEDIKRLYDLFAPIQTRIVAQ-----RSQLIPGWK 117
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
+ D+ A G KV + + L + DV + +P P + +
Sbjct: 118 EVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT--PASTVFATDVVRGRPFPDMAL 175
Query: 246 TAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSN 303
A L + + C+ V+D++ G++ RAGM V ++ + + D +D A+ D
Sbjct: 176 KVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQ 235
Query: 304 VRLKDLELLLQNVVA 318
+ E L N A
Sbjct: 236 SYRQHAEQRLFNAGA 250
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 8e-29
Identities = 37/255 (14%), Positives = 81/255 (31%), Gaps = 21/255 (8%)
Query: 63 SSQSLQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
++A+IF G ++ + + + F V +++++
Sbjct: 2 DRMKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGV--AITAEEARKP----------- 48
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
+G K E +S + I + + E I+ P
Sbjct: 49 MGLLKIDHVRALTEMPRIASEWNRVFRQLPTEA--DIQEMYEEFEEILFAILPRYA-SPI 105
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
GV ++ + G K+ + T+ + + + D + DDV +P P
Sbjct: 106 NGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP--DFLVTPDDVPAGRPYP 163
Query: 242 SIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYP 299
+ A LG+ + V D+V ++ AGM V + SS ++ +
Sbjct: 164 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDS 223
Query: 300 DLSNVRLKDLELLLQ 314
+++ +
Sbjct: 224 VELREKIEVVRNRFV 238
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 4e-24
Identities = 35/234 (14%), Positives = 70/234 (29%), Gaps = 42/234 (17%)
Query: 68 QALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
A+IFD +I++ + R + + + + + + I
Sbjct: 26 TAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYK-----------NIDLDSIPNSTIPKYL 74
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
+ + L + ++ KS G +
Sbjct: 75 ITL-----------------LGKRWKEATILYE-------NSLEKSQKSDNFMLNDGAIE 110
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
L+D K +A+ S + + + F D + D KP P +
Sbjct: 111 LLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF---DSIIGSGDTGTIKPSPEPVLA 167
Query: 247 AAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAE-QDFKDAIAI 297
A + I K+ + DS+ +Q+A AG + T+ + FK+ I
Sbjct: 168 ALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNIIKDILSFKNFYDI 221
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 3e-22
Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 9/142 (6%)
Query: 160 LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219
LI D+ + GT E + L+ AK G + S + L
Sbjct: 5 LIVDYAG------VLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58
Query: 220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
D L ++ +KP+ + + AA + + +DC++V+DS++ ++ A AG+ V
Sbjct: 59 GVV---DKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115
Query: 280 ITYTSSTAEQDFKDAIAIYPDL 301
A + + +
Sbjct: 116 YYQQFDRAVVEIVGLFGLEGEF 137
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 8e-22
Identities = 30/214 (14%), Positives = 70/214 (32%), Gaps = 46/214 (21%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
I+D G ++++ A+ + + + + + +D + + P
Sbjct: 7 HDYIWDLGGTLLDNYETSTAAFVETLALYGI-------------TQDHDSVYQALKVSTP 53
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR--PGVL 185
E P+ F E+Y++ P GV
Sbjct: 54 FA----IETFAPNLENF---------------------LEKYKENEARELEHPILFEGVS 88
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
L+++ G + + S ++ +L + + + + ++KP+P +
Sbjct: 89 DLLEDISNQGGRHFLVS--HRNDQVLEILEKTSIAAY--FTEVVTSSSGFKRKPNPESML 144
Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
++ IS LV+ D I ++A AG+
Sbjct: 145 YLREKYQISS--GLVIGDRPIDIEAGQAAGLDTH 176
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 89.2 bits (221), Expect = 2e-21
Identities = 21/158 (13%), Positives = 39/158 (24%), Gaps = 10/158 (6%)
Query: 159 DLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218
L+ + PG + + G A ++ +
Sbjct: 16 CLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPVN- 74
Query: 219 MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMA 277
D +A P P A L +S + C+++ LQ+ AG+
Sbjct: 75 -------DWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLW 127
Query: 278 CV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314
+ + A+ R L L
Sbjct: 128 TIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLY 165
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 8e-21
Identities = 32/258 (12%), Positives = 86/258 (33%), Gaps = 37/258 (14%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
++FD DG +++ E ++R+ DA +D G +
Sbjct: 6 LVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS---------TGSHDFSGKMDGAIIYE 56
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ G + A D ++ +++ + + GV L+
Sbjct: 57 V---LSNVGLE-----------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELL 102
Query: 189 DEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
D + + + + ++S L+ G++ + DD + P I +
Sbjct: 103 DALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDHY--FPFGAFADDALDRNELPHIALER 159
Query: 248 AKRL---GISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQ-DFKDAIAIYPDLS 302
A+R+ S +++ D+ ++ A + + + T E+ ++ + +
Sbjct: 160 ARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFA 219
Query: 303 NVRLKDLELLLQNVVAAS 320
+ + +L +++
Sbjct: 220 -----ETDEVLASILTPK 232
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 1e-20
Identities = 35/214 (16%), Positives = 76/214 (35%), Gaps = 37/214 (17%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
+ QAL+FD DG + S+ + + + +
Sbjct: 3 TYQALMFDIDGTLTNSQPAYTTVMREVLAT------------YGKPFSPAQAQKTFPMAA 50
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+ M E G + + +D Y Q +E PG+
Sbjct: 51 EQAMT----ELG-----------IAASEFDHFQAQYEDVMASHYDQ------IELYPGIT 89
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
L ++ + ++ + ++ ++ + + + M R ++ DD ++KPDP +
Sbjct: 90 SLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM---AVTISADDTPKRKPDPLPLL 145
Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
TA +++ ++ ++ L + DSV Q A A +
Sbjct: 146 TALEKVNVAPQNALFIGDSVSDEQTAQAANVDFG 179
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 2e-20
Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 40/222 (18%)
Query: 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF-YDVLQN 120
+++ +FD D + +S + D+++
Sbjct: 1 SNAMKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGY-------------TGITDDMIKR 47
Query: 121 QIGGGKPK-MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVE 179
IG + D +L Q++ + + + T+
Sbjct: 48 TIGKTLEESFSILTGI----------------TDADQLESFRQEYS-KEADIYMNANTI- 89
Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLAGDDVKQK 237
P L + K G ++ + S TK ++ L N + + F D + G+DV
Sbjct: 90 LFPDTLPTLTHLKKQGIRIGIIS--TKYRFRILSFLRNHMPDDWF---DIIIGGEDVTHH 144
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
KPDP + A RL ++ L + DS + A AG++
Sbjct: 145 KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFT 186
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-18
Identities = 46/258 (17%), Positives = 80/258 (31%), Gaps = 54/258 (20%)
Query: 27 SSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIES-EHLH 85
S H+ H L F+ + + + FD DG ++ S L
Sbjct: 3 SDKIHH-HHHHENLYFQGMTQF-------------------KLIGFDLDGTLVNSLPDLA 42
Query: 86 RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145
+ N A N +++ IG G + + +
Sbjct: 43 L-SINSALKDVN------------LPQASENLVMTWIGNGADVL----SQRAVDWACKQA 85
Query: 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS--- 202
+T+D+ + Y + + + + P V ++ KA G +AV +
Sbjct: 86 EKELTEDEFKYFKRQFGFY----YGENLCNISR-LYPNVKETLEALKAQGYILAVVTNKP 140
Query: 203 -AATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVV 261
+ L F L G + + KP P+ + + G+ K L V
Sbjct: 141 TKHVQ----PILTAFGIDHLF---SEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFV 193
Query: 262 EDSVIGLQAATRAGMACV 279
DS + AA AG A V
Sbjct: 194 GDSQNDIFAAHSAGCAVV 211
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 2e-18
Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 36/225 (16%)
Query: 68 QALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF-YDVLQNQIGGG 125
+A IFD DG I+++ L A N AF R +F + ++N G G
Sbjct: 5 KAAIFDMDGTILDTSADLTS-ALNYAFEQTGHR------------HDFTVEDIKNFFGSG 51
Query: 126 KPKM-------RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
+ D Q ++ +++ +K Y + T
Sbjct: 52 VVVAVTRALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFK-PYYADHCQIKTG 110
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCS----AATKSSVILCLENLIGMERFEGLDCFLAGDDV 234
P PG+L LM + G K+AV S A + + +E L F D L
Sbjct: 111 -PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQ----VLVEELFP-GSF---DFALGEKSG 161
Query: 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
++KP P + K LG+ C+ + DS I +Q A + M +
Sbjct: 162 IRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEI 206
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 8e-18
Identities = 27/212 (12%), Positives = 70/212 (33%), Gaps = 35/212 (16%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
A I+D DG +++S + F+ F+ + +D E V +
Sbjct: 5 TAFIWDLDGTLLDSYEAILSGIEETFAQFS----------IPYDKE--KVREFIFKYSVQ 52
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ +D+ ++++ + + + V PG +
Sbjct: 53 DL---LVRVA--------------EDRNLDVEVLNQVR-AQSLAEKNAQVV-LMPGAREV 93
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
+ A +G + + + ++ + L++L F L +KP P
Sbjct: 94 LAWADESGIQQFIYTHKGNNAFTI-LKDLGVESYF---TEILTSQSGFVRKPSPEAATYL 149
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
+ ++ + + D + ++ A +G+ +
Sbjct: 150 LDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI 181
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 4e-17
Identities = 27/212 (12%), Positives = 65/212 (30%), Gaps = 33/212 (15%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
++FD DG + +S ++ + + F+++ + L +G
Sbjct: 5 NYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVED------------LSSLNKFVGPPLK 52
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
F E+ ++ ID + + ++ + G+ L
Sbjct: 53 TS---FMEY----------YNFDEETATVAIDYYR----DYFKAKGMFEN-KVYDGIEAL 94
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
+ K G + V ++ LE+ F D + + + A
Sbjct: 95 LSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF---DAIVGSSLDGKLSTKEDVIRYA 151
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
+ L I D +++ D + A + + +
Sbjct: 152 MESLNIKSDDAIMIGDREYDVIGALKNNLPSI 183
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 1e-16
Identities = 46/217 (21%), Positives = 80/217 (36%), Gaps = 41/217 (18%)
Query: 66 SLQALIFDCDGVIIES-EHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
SL+ ++FD DG +I+S + + A + + D + IGG
Sbjct: 2 SLRVILFDLDGTLIDSAKDIAL-ALEKTLKELG------------LEEYYPDNVTKYIGG 48
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
G + E D + + +++ + Y + T P P +
Sbjct: 49 GVRAL----LEKVLK-----------DKFREEYVEVFRKH----YLENPVVYTK-PYPEI 88
Query: 185 LRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
++ K+ G K+AV S K L+ L F D + GD +KKP P+
Sbjct: 89 PYTLEALKSKGFKLAVVS--NKLEELSKKILDILNLSGYF---DLIVGGDTFGEKKPSPT 143
Query: 243 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
+ + LG + L+V D+ ++A RAG
Sbjct: 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTA 180
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 1e-16
Identities = 34/213 (15%), Positives = 70/213 (32%), Gaps = 28/213 (13%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+A++ D ++ + + + D + + +
Sbjct: 4 KAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLR---------KVFRAYAKAM----- 49
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
M Y E G ++ D I + E + I+ G L
Sbjct: 50 GMINYPDEDGL------EHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEF 103
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
++ K+ G K+A+ S A+ V LE ++++ D ++K KP+P I+ A
Sbjct: 104 LEGLKSNGYKLALVSNAS-PRVKTLLEKF-DLKKY--FDALALSYEIKAVKPNPKIFGFA 159
Query: 248 AKRLGISEKDCLVVEDSVIG-LQAATRAGMACV 279
++G + V D A R+ + +
Sbjct: 160 LAKVGY---PAVHVGDIYELDYIGAKRSYVDPI 189
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-16
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226
+++ + G+ P PG + L+ E G ++ + + + + LE + + F D
Sbjct: 59 LEHERDLAQGSR-PAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD 117
Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
G D KP P + A+ +S ++V D L AG V
Sbjct: 118 V--LGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTV 168
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 6e-16
Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 35/232 (15%)
Query: 49 LSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSL 108
+ L + +A ++ + ++FD DG + + + ++ + + F +
Sbjct: 11 VDLGTENLYFQSNAMKKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGI---------- 60
Query: 109 NWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTER 168
E + L IG FKE+ D + ++ + E
Sbjct: 61 ---KEDLENLDQFIGPPLHDT---FKEYY----------KFEDKKAKEAVEKYR----EY 100
Query: 169 YQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228
+ + + +++ GK + V ++ L F
Sbjct: 101 FADKGIFEN-KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF---KYI 156
Query: 229 LAGDDVKQKKPDPSIYVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACV 279
+ + + + +KD ++V D + A + G+ +
Sbjct: 157 AGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSI 208
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-15
Identities = 35/225 (15%), Positives = 73/225 (32%), Gaps = 34/225 (15%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
AL +D GV++ + R+ D F + D +++ PE G+
Sbjct: 6 ALFWDIGGVLLTN-GWDREQRADVAQRFGLDTDDFTERHRLAAPELEL--------GRMT 56
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ Y ++ + P + D +PRP VL L
Sbjct: 57 LAEYLEQ-------VVFYQPRDFTPE----DFRAVM----------EEQSQPRPEVLALA 95
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
+ ++ + + + E F + KP+P++Y
Sbjct: 96 RDLGQ-RYRMYSLNNEGRDLNEYRIRTFGLGEFLLA---FFTSSALGVMKPNPAMYRLGL 151
Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 293
+ ++ ++V+D + +QAA GM V ++ ++
Sbjct: 152 TLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDAAQLREELAA 196
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 2e-15
Identities = 31/252 (12%), Positives = 73/252 (28%), Gaps = 25/252 (9%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
+ ++ + FD +++ + + + + + ++N+I
Sbjct: 2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVA--------NAVIEVRNEI-- 51
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
+ + + + KL ++ K + I+ G
Sbjct: 52 -----KKMRAQASEDPRKVLTG--SQEALAGKLKVDVELVKRATARAILNVDESLVLEGT 104
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
+ K G K AV L E +D D+V KP ++
Sbjct: 105 KEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMF 164
Query: 245 VTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLS 302
+ ++ L + D+ Q A + GM V I + + I
Sbjct: 165 EKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP---- 220
Query: 303 NVRLKDLELLLQ 314
+ +L+ +++
Sbjct: 221 --SIANLKDVIE 230
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 4e-15
Identities = 45/263 (17%), Positives = 82/263 (31%), Gaps = 30/263 (11%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++ L +D ++ H +AY + +PS+ + F +
Sbjct: 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQ-----GFRQAYR-AQSHSF 54
Query: 127 PKMRWYFKEHGWPS--------STIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
P Y HG S F V D + + + Y+ T
Sbjct: 55 PN---YGLSHGLTSRQWWLDVVLQTFHLAGVQDAQ--AVAPIAEQL----YKDFSHPCTW 105
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKK 238
+ G + E + G ++AV S + L L G+ D L + K
Sbjct: 106 QVLDGAEDTLRECRTRGLRLAVISNFD-RRLEGILGGL-GLREH--FDFVLTSEAAGWPK 161
Query: 239 PDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACVITYTSSTAEQDFKDAIAI 297
PDP I+ A + + V D+ + Q GM + + +D++
Sbjct: 162 PDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPK 221
Query: 298 YPDLSNVRLKDLELLLQNVVAAS 320
L + L L L + ++
Sbjct: 222 EHILPS--LAHLLPALDCLEGSA 242
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 72.1 bits (176), Expect = 9e-15
Identities = 31/233 (13%), Positives = 69/233 (29%), Gaps = 18/233 (7%)
Query: 60 VSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-----CDPSSQQSLNWDPEF 114
V + + ++ D +G + + + + QQ ++ +
Sbjct: 3 VLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQ 62
Query: 115 YDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD-----NPPVTDDDQAKLIDLIQD--WKTE 167
+ + G P I ++ D + + +Q W+
Sbjct: 63 AEE-DAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWR-A 120
Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227
+ V+ + + + AG KV + S+ + + L + + E +D
Sbjct: 121 AFTAGRMKAEF--FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG 178
Query: 228 FLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280
D K + Y A +G S + L + D AA A + +
Sbjct: 179 HF--DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAV 229
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 70.6 bits (174), Expect = 1e-14
Identities = 29/215 (13%), Positives = 69/215 (32%), Gaps = 38/215 (17%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
S+ A+ FD DG +++S A+ F V P ++ + +G
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVP-SPDAKTIRGF-----------MGP 49
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
F ++ D ++ + + + Y+ + P +
Sbjct: 50 PLESS---FATC------------LSKDQISEAVQIYR----SYYKAKGIYEA-QLFPQI 89
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIY 244
+ L++E + + + + S+ +NL F D K D
Sbjct: 90 IDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF---DGIYGSSPEAPHKADVIHQ 145
Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
A + ++ + +++ D+ + A G+ +
Sbjct: 146 --ALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 72.9 bits (178), Expect = 1e-14
Identities = 51/311 (16%), Positives = 102/311 (32%), Gaps = 56/311 (18%)
Query: 34 IFHTNALRFKSNKKPLSLSLTRKALRVSASSQ-SLQALIFDCDGVIIESEHLHRQAYNDA 92
+ H F +P+ L L + ++ + Q + D V + +++ A
Sbjct: 96 LSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFA 155
Query: 93 FSHFNV-RCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
+ +V S + W +V Q WY
Sbjct: 156 TTELHVSDATLFSLKGALWTLA-QEVYQE----------WYL-----------------G 187
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
+ ++ T + I + + P V L+++ K AG ++ + + + ++
Sbjct: 188 SKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247
Query: 212 CLENLIGMERFEGLDCFLAGDDVK-----------QKKPDPSIYVTAAKR---------- 250
ENL G+ + D DV KP+P Y+ A
Sbjct: 248 PFENL-GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYI 306
Query: 251 ----LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL 306
+++ D +V DS+ L +A + G + T T + + A + D L
Sbjct: 307 NKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
Query: 307 KDLELLLQNVV 317
+L +L N++
Sbjct: 367 GELRGVLDNLL 377
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-13
Identities = 42/255 (16%), Positives = 84/255 (32%), Gaps = 38/255 (14%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+ + FD D ++++ L A +A + P + Y L
Sbjct: 3 KVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFE------TAYSELIE------- 49
Query: 128 KMRWYFKEHGWPSSTIFD------NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
KE+G FD + P + + + + ++ +
Sbjct: 50 ----LIKEYGSNFPYHFDYLLRRLDLPY---NPKWISAGVIAYHNTKFAYL------REV 96
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
PG +++ K G ++ + + + L ++ F + + D KKP P
Sbjct: 97 PGARKVLIRLKELGYELGIITDGNPVKQWEKILRL-ELDDF--FEHVIISDFEGVKKPHP 153
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300
I+ A K + ++ L+V D + + A R GM V + + + Y D
Sbjct: 154 KIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTV--WFRYGKHSERELEYRKYAD 211
Query: 301 LSNVRLKDLELLLQN 315
L+ L +L
Sbjct: 212 YEIDNLESLLEVLAR 226
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 68.7 bits (167), Expect = 2e-13
Identities = 44/247 (17%), Positives = 80/247 (32%), Gaps = 29/247 (11%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
FD D + +S + F Q L PE VL
Sbjct: 59 VFFFDIDNCLYKSSTRIHDLMQQSILRF-------FQTHLKLSPEDAHVLN--------- 102
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
Y+KE+G + L + Q I+K P +L +
Sbjct: 103 -NSYYKEYGLAIRGLVMF-----HKVNALEYNRLVDDSLPLQDILKP--DIPLRNMLLRL 154
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-LDCFLAGDDVKQKKPDPSIYVTA 247
++ K + + A K+ I CL L + F+G C + D KP + A
Sbjct: 155 RQSGKIDKLW-LFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKA 213
Query: 248 AKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL 306
K G++ ++ ++DS ++ + GM I + + +S+ +
Sbjct: 214 MKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--I 271
Query: 307 KDLELLL 313
+L ++
Sbjct: 272 LELPHVV 278
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-13
Identities = 33/249 (13%), Positives = 77/249 (30%), Gaps = 60/249 (24%)
Query: 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
A ++ IFD VI+ + D
Sbjct: 2 ARKEAKMLYIFDLGNVIV-----------------------------DIDFNRV------ 26
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDD---------DQAKLIDLIQ-----DWKTE 167
+ + P +++ + + + + + E
Sbjct: 27 -------LGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYE 79
Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG-MERFEGLD 226
++ ++ V RP V+ +M + + G +V V S + E + + +
Sbjct: 80 QFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHI- 138
Query: 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286
+L+ D + +KP+ IY + G S D + +D+ ++ A + G+ ++ +T
Sbjct: 139 -YLSQD-LGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT 196
Query: 287 AEQDFKDAI 295
F +
Sbjct: 197 IPDYFAKVL 205
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 4e-13
Identities = 41/245 (16%), Positives = 76/245 (31%), Gaps = 38/245 (15%)
Query: 54 TRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPE 113
T S S+ ++ L+ D GV+I N D E
Sbjct: 15 TENLYFQSMKSKGIKNLLIDLGGVLI-----------------------------NLDRE 45
Query: 114 FYDVLQNQIGGGKPKMRWYFKEHGWPSSTI-FDNPPVTDDDQAKLI--DLIQDWKTERYQ 170
++N G + F H + + +T + I + + ++
Sbjct: 46 --RCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQID 103
Query: 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF-- 228
S V+ L L+ + + V + S +N F+ D F
Sbjct: 104 AAWNSFLVDIPTYKLDLLLKLREKYV-VYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK 162
Query: 229 -LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287
++K KP+P I+ + GI K+ ++DS I + A G++
Sbjct: 163 TYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDW 222
Query: 288 EQDFK 292
F+
Sbjct: 223 SHLFR 227
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 2e-11
Identities = 24/247 (9%), Positives = 63/247 (25%), Gaps = 54/247 (21%)
Query: 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
S+ ++ ++FD GV+I + + E + ++
Sbjct: 1 SNAMIRNIVFDLGGVLI-----------------------------HLNRE--ESIRRFK 29
Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDD-----QAKLIDLIQ-----DWKTERYQQI 172
G + D + + + + + ++
Sbjct: 30 AIGVADIEEMLDP-------YLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDA 82
Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF---L 229
+ E +D ++ + S + L + F
Sbjct: 83 LLGFLEEISAEKFDYIDS-LRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVY 141
Query: 230 AGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS-TAE 288
A + + KP+ I++ G+ ++ L ++D + A R G +
Sbjct: 142 ASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFH-TYCPDNGENWI 200
Query: 289 QDFKDAI 295
+
Sbjct: 201 PAITRLL 207
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 2e-10
Identities = 39/257 (15%), Positives = 89/257 (34%), Gaps = 31/257 (12%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQ---NQIGG 124
+A+ FD D +I++ R+ + + + + D + + +
Sbjct: 19 RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYST 78
Query: 125 GKPKMRWY-FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
+R ++E D++ + WK+ R Q +
Sbjct: 79 CITDVRTSHWEE-------AIQETKGGADNRKLAEECYFLWKSTRLQHM------ILADD 125
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
V ++ E + ++ + + + + +E + + D + G + K++KP PSI
Sbjct: 126 VKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC-ACQSY--FDAIVIGGEQKEEKPAPSI 181
Query: 244 YVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP 299
+ LG+ DC++V D+ + G AG+ + + P
Sbjct: 182 FYHCCDLLGVQPGDCVMVGDTLETDIQG---GLNAGLKATVWINK---SGRVPLTSSPMP 235
Query: 300 DLSNVRLKDLELLLQNV 316
+ +L LLQ++
Sbjct: 236 HYMVSSVLELPALLQSI 252
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 3e-10
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ 236
+ P V + E K G K+A+ S + S+ + + G+ D L+ D V+
Sbjct: 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-GLRDG--FDHLLSVDPVQV 149
Query: 237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279
KPD +Y A + LG+ L V + A G
Sbjct: 150 YKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 192
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 9e-10
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ 236
+ P +++ K+AG VA+ S + L+ ++R LD L+ DD+K
Sbjct: 103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKAS-KLDRV--LDSCLSADDLKI 159
Query: 237 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAI 295
KPDP IY A RLG++ + V + L A + G V I + E +F
Sbjct: 160 YKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLK 219
Query: 296 AIYPDLSNVRLKDLELLLQNVVAAS 320
LS + LL +NV A+
Sbjct: 220 HQVNSLSEL----WPLLAKNVTKAA 240
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 2e-09
Identities = 29/222 (13%), Positives = 68/222 (30%), Gaps = 33/222 (14%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSS-QQSLNW-----DPEFYDVLQNQ 121
+ L FD D I R + + + ++ S + + + +
Sbjct: 6 KNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGK 65
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
+ K ++ + V D+ A+ +D+ +
Sbjct: 66 VT--KEELNRQRFFY------PLQAVGVEDEALAE--RFSEDFFAIIPTK------SGLM 109
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
P +++ + + S + + + G++R+ + +D+ KP P
Sbjct: 110 PHAKEVLEYLAP-QYNLYILSNGFRELQSRKMRSA-GVDRY--FKKIILSEDLGVLKPRP 165
Query: 242 SIYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACV 279
I+ A ++ L++ DS + G A GM
Sbjct: 166 EIFHFALSATQSELRESLMIGDSWEADITG---AHGVGMHQA 204
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 2e-08
Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 27/172 (15%)
Query: 159 DLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218
+ Y +++ R +++ K G K A+ S S + L
Sbjct: 20 TRYDHHPLDTYPEVV------LRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-- 71
Query: 219 MERFEGLDCF-------LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS----VIG 267
F +D F K +KPD +I+ L I + + ++V ++ +IG
Sbjct: 72 -TNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIG 130
Query: 268 LQAATRAGMACV----ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315
A RAG+ + + P + + LLL+
Sbjct: 131 ---ANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKK 179
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 7e-08
Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 39/222 (17%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
A+ FD G + E + LN D +
Sbjct: 4 AVFFDSLGTLNSVEGAAKSHLKIMEEVLG-------DYPLNPK-TLLD-----------E 44
Query: 129 MRWYFKEHG--WPSSTIFDNPPVTDDDQAKL-----IDLIQDWKTERYQQIIKSGTVEPR 181
+E + + ++ KL +++ E ++ + E
Sbjct: 45 YEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEKYGFKYPENFW-EISLRMSQR-YGELY 102
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDP 241
P V+ ++ K V + + + + L+ L G++ D ++ KP P
Sbjct: 103 PEVVEVLKSLKG-KYHVGMITDSDTEQAMAFLDAL-GIKDL--FDSITTSEEAGFFKPHP 158
Query: 242 SIYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACV 279
I+ A K+ G+ ++ + V D+ G + GM +
Sbjct: 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGG---SKNLGMTSI 197
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 1e-07
Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 7/133 (5%)
Query: 149 VTDDDQAKLIDLIQDWKTERYQQIIKSG--TVEPRPGVLRLMDEAKAAGKKVAVCSAATK 206
VT + A + + E + + + P P + + E K A+ S
Sbjct: 61 VTREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAP 118
Query: 207 SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266
+ + N G+ D ++ D + KP P Y + LG++ + L V +
Sbjct: 119 DMLQALVANA-GLTDS--FDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGF 175
Query: 267 GLQAATRAGMACV 279
+ A G +
Sbjct: 176 DVGGAKNFGFSVA 188
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 2e-07
Identities = 37/259 (14%), Positives = 69/259 (26%), Gaps = 51/259 (19%)
Query: 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
+FDCD +++++H+ F + E ++ L+ ++G
Sbjct: 14 FLFDCDNTLLDNDHVLADLRAHMMREFGAQNSAR-------YWEIFETLRTELGYADYLG 66
Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
P T D + PG L +
Sbjct: 67 ALQRYRLEQPRDTRLLLMSSFLIDYPFASRVY--------------------PGALNALR 106
Query: 190 EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-----LDCFLAGDDVKQKKPDPSIY 244
A G + S + + EG + L D V + P
Sbjct: 107 HLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLIYIHKELMLDQVMECYPA---- 161
Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY---PDL 301
+ ++V+D + L A +A A + T F D+
Sbjct: 162 -----------RHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADV 210
Query: 302 SNVRLKDLELLLQNVVAAS 320
+ R+ DL + + A
Sbjct: 211 TVERIGDLVEMDAEWLLAE 229
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 4e-07
Identities = 39/227 (17%), Positives = 65/227 (28%), Gaps = 51/227 (22%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPS---------SQQSLNWDPE--FYD 116
+AL FDC G +I+ E A P + D
Sbjct: 7 KALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQD 66
Query: 117 VLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSG 176
+L+ KE G ++ + +++W
Sbjct: 67 ILRA-------VYDRIAKEWGLE---------PDAAEREEFGTSVKNWP----------- 99
Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ 236
P + + K K+ + S ++ L L F D + DV
Sbjct: 100 ---AFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKL--GVEF---DHIITAQDVGS 150
Query: 237 KKPDPSIYVTAAKRL---GISEKDCLVVEDSVIG-LQAATRAGMACV 279
KP+P+ + L GI +KD L +S+ A AG+
Sbjct: 151 YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 1e-06
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 29/257 (11%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
Q++Q + FD D + +SE +R A D + + D + + ++ +
Sbjct: 11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQ----QHLLAVERR--- 63
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVT--DDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
K G+ + + + T + +A++ E + ++ VE
Sbjct: 64 -------NLKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHP-VEVIA 115
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
GV + A AA V + + +E + F ++ + DP
Sbjct: 116 GVREAV-AAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV--------SEKDPQ 166
Query: 243 IYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPD 300
Y + + +++ +S+ ++ G + Y + A + A P
Sbjct: 167 TYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPR 226
Query: 301 LSNVR-LKDLELLLQNV 316
L V ++ +
Sbjct: 227 LREVPDPSGWPAAVRAL 243
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 46.6 bits (110), Expect = 2e-06
Identities = 17/121 (14%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK 237
V P V ++ ++ G A S ++ + L E F+ F+ +
Sbjct: 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEG--ANQLL---ELFDLFRYFVHREIYPGS 121
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 297
K + ++ GI + +D + ++ G+ C+ Q +
Sbjct: 122 KIT--HFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMN-LQTLSQGLET 178
Query: 298 Y 298
+
Sbjct: 179 F 179
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 46.7 bits (110), Expect = 3e-06
Identities = 31/256 (12%), Positives = 75/256 (29%), Gaps = 41/256 (16%)
Query: 38 NALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFN 97
+ + + + + R+ + + D +G + + + +
Sbjct: 2 GSDKIHHHHHHMVIGQKVLLARIPKMGDNYSTYLLDIEGTVCPISFVKETLFPYFTNKVP 61
Query: 98 VRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKL 157
++ D ++L K +++ + E V D + +
Sbjct: 62 QLVQQDTR-----DSPVSNILSQFHIDNKEQLQAHILE------------LVAKDVKDPI 104
Query: 158 IDLIQD--WKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215
+ +Q W Y+ V + + K+V + S S + +
Sbjct: 105 LKQLQGYVWA-HGYESGQIKAPV--YADAIDFI----KRKKRVFIYS----SGSVKAQKL 153
Query: 216 LIGMERFEGLDCFLAGD-----------DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS 264
L G + + D + KK + Y + +G + L + D+
Sbjct: 154 LFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAKASEVLFLSDN 213
Query: 265 VIGLQAATRAGMACVI 280
+ L AA G+A +
Sbjct: 214 PLELDAAAGVGIATGL 229
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 32/225 (14%), Positives = 72/225 (32%), Gaps = 44/225 (19%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQ---QSLNWDPEFYDVLQNQIGG 124
+ L+FD D I++ + A F N+ + +++N + + ++
Sbjct: 8 RTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTIN-QGLWRAFEEGKMT- 65
Query: 125 GKPKMRWY-----FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVE 179
+ ++ KE+G+ + D A L + + E +Q
Sbjct: 66 -RDEVVNTRFSALLKEYGY------------EADGALLEQKYRRFLEEGHQ--------- 103
Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKP 239
G L+ + + + + + L + F +D +KP
Sbjct: 104 LIDGAFDLISNLQQ-QFDLYIVTNGVSHTQYKRLRDSGLFPFF---KDIFVSEDTGFQKP 159
Query: 240 DPSIYVTAAKRLG-ISEKDCLVVEDS----VIGLQAATRAGMACV 279
+ +R+ S + L++ DS + G AG+
Sbjct: 160 MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKG---GQLAGLDTC 201
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 2e-05
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 297
KP+P IY L S + + ++D L+ A GM ++ + TA ++ + I
Sbjct: 160 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGI 219
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 6e-05
Identities = 49/376 (13%), Positives = 102/376 (27%), Gaps = 143/376 (38%)
Query: 6 ILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALRFKSN--KKPLSLSLTRKALRVSAS 63
++S T S T + + +++ N + K N + L L R+AL
Sbjct: 94 LMSPIKTEQRQPSMMTR--MYIE-QRDRLYNDNQVFAKYNVSRLQPYLKL-RQAL----- 144
Query: 64 SQSLQALIFDCDGVIIESEH---------LHRQAYND-----AFSHFNV------RCD-P 102
L+ V+I + F + C+ P
Sbjct: 145 -LELR----PAKNVLI---DGVLGSGKTWVALDVCLSYKVQCKMD-FKIFWLNLKNCNSP 195
Query: 103 SS----QQSL------NWD--PEFYDVLQNQIGGGKPKMRWYFKEHGWPSS-TIFDNPPV 149
+ Q L NW + ++ +I + ++R K + + + N V
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--V 253
Query: 150 TDDDQAKLID-----LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAA 204
+ + L+ T R++Q+ SAA
Sbjct: 254 QNAKAWNAFNLSCKILL----TTRFKQVT-------------------------DFLSAA 284
Query: 205 TKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD-----C- 258
T + + L + + + E K L +D
Sbjct: 285 TTTHISL-DHHSMTLTPDEVKSLL-------------------LKYLDCRPQDLPREVLT 324
Query: 259 ---LVVEDSVIGLQAATRAGMA-------------------CVITYTSSTAEQDFKDAIA 296
+ S+I + R G+A + + + F ++
Sbjct: 325 TNPRRL--SIIA--ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR-LS 379
Query: 297 IYPDLSNVRLKDLELL 312
++P +++ L L+
Sbjct: 380 VFPPSAHIPTILLSLI 395
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 7e-05
Identities = 13/84 (15%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 294
KP+ + ++ A + + ++ +++ D + A GM ++ T D +
Sbjct: 179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDVD--GAQNIGMLGILVKTGKYKAADEEKI 236
Query: 295 IAIYPDLSNVRLKDL-ELLLQNVV 317
P L+ + +LQ+++
Sbjct: 237 -NPPPYLTCESFPHAVDHILQHLL 259
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 8e-05
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT----SSTAEQDFKD 293
KP P +Y A+R + V DS+ LQAA +AG A + T + A+ +
Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPE 160
Query: 294 AIAIYPDLS 302
+ DL+
Sbjct: 161 GTRVCEDLA 169
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 1e-04
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 197 KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256
+V S + + V LE + F + + VK+ KP P +Y +G E
Sbjct: 90 EVYALSNGSINEVKQHLERNGLLRYF---KGIFSAESVKEYKPSPKVYKYFLDSIGAKE- 145
Query: 257 DCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDL-ELLLQ 314
+V + + A AGM + + ++ D I PD+ K+L E +L+
Sbjct: 146 -AFLVSSNAFDVIGAKNAGMRSIFVNRKNTIV-----DPIGGKPDVIVNDFKELYEWILR 199
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 1e-04
Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 294
KP P I A ++ ++ ++V D++ I A +AG+ ++ + ++ D
Sbjct: 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDI--LAGFQAGLETILVLSGVSSLDDIDSM 233
Query: 295 IAIYPDLSNVRLKDLELL 312
P + +++++
Sbjct: 234 -PFRPSWIYPSVAEIDVI 250
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 4e-04
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 294
KP P + +A + +G+ +++ D + +G A R GM + T D
Sbjct: 190 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVG--GAQRCGMRALQVRTGKFRPSDEHHP 247
Query: 295 IAIYPDLSNVRLKDL-ELLLQN 315
+ D L + +LLLQ+
Sbjct: 248 -EVKADGYVDNLAEAVDLLLQH 268
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 4e-04
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 294
KP+ I A + L I ++V D+ I A + ++ T T ++ D
Sbjct: 182 KPNAIIMNKALEILNIPRNQAVMVGDNYLTDI--MAGINNDIDTLLVTTGFTTVEEVPDL 239
Query: 295 IAIYPDLSNVRLKDLEL 311
I P L +
Sbjct: 240 -PIQPSYVLASLDEWTF 255
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 5e-04
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 297
KP+P + V A KRL + + L+V D + +QA RAG+A A Q AI
Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQ---PGFAI 193
Query: 298 YPDLSNVRLKDL----ELLLQN 315
P + L DL E L ++
Sbjct: 194 RPLRDSSELGDLLAAIETLGRD 215
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* Length = 271 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 5e-04
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 294
KP+P + +++ G+ ++ +V D + + + AG+ ++ T T +D + A
Sbjct: 195 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDV--KLGKNAGIVSILVLTGETTPEDLERA 252
Query: 295 IAIYPDLSNVRLKDLELLLQ 314
PD L +L +Q
Sbjct: 253 -ETKPDFVFKNLGELAKAVQ 271
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} Length = 268 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 6e-04
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 294
KP I A LG+ KD VV D + + A G V+ T T ++
Sbjct: 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDV--AAGKAIGAETVLVLTGVTTRENLDQM 244
Query: 295 IA---IYPDLSNVRLKDLELLLQ 314
I + PD LKD+ L+
Sbjct: 245 IERHGLKPDYVFNSLKDMVEALE 267
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 8e-04
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 294
KP+ I A + LG + L+V D+ I A AGM ++ +T T + D
Sbjct: 183 KPESIIMEQAMRVLGTDVSETLMVGDNYATDI--MAGINAGMDTLLVHTGVTKREHMTDD 240
Query: 295 IAIYPDLSNVRLKDLELLLQ 314
P + L + ++
Sbjct: 241 -MEKPTHAIDSLTEWIPYIE 259
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 39.5 bits (92), Expect = 8e-04
Identities = 38/255 (14%), Positives = 75/255 (29%), Gaps = 37/255 (14%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++ + FD D + +E ++ ++ L ++
Sbjct: 8 IKVIAFDADDTLWSNEPFFQEVE-KQYTDL-----------LKPYGTSKEISAALFQTEM 55
Query: 127 PKMRWY-FKEHGWPSSTIFDNPPVTDD--DQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
++ + + S + +++ + ++ K+ I E PG
Sbjct: 56 NNLQILGYGAKAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPI------ELLPG 109
Query: 184 VLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPS 242
V + K GK K+ V + LE GL + +V K
Sbjct: 110 VKETLKTLKETGKYKLVVATKGDLLDQENKLERS-------GLSPYFDHIEVMSDKT-EK 161
Query: 243 IYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298
Y+ L I+ + L+V +S + G V + + + A
Sbjct: 162 EYLRLLSILQIAPSELLMVGNSFKSDIQP---VLSLGGYGVHIPFEVMWKHEVTETFAHE 218
Query: 299 PDLSNVRLKDLELLL 313
RL DL LL
Sbjct: 219 RLKQVKRLDDLLSLL 233
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 9e-04
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 294
KP I A LG+ ++ ++V D+ I Q+ + G+ ++ + T +
Sbjct: 183 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPTL 240
Query: 295 IAIYPDLSNVRLKDLEL 311
P L +
Sbjct: 241 -PTPPTYVVDSLDEWTF 256
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 100.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 100.0 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 100.0 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 100.0 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 100.0 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 100.0 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.98 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.97 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.97 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.97 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.97 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.97 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.97 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.97 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.97 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.97 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.97 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.97 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.97 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.97 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.97 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.97 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.97 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.96 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.96 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.96 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.96 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.96 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.96 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.96 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.96 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.95 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.95 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.95 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.95 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.95 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.95 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.95 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.95 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.95 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.95 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.95 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.95 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.95 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.95 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.94 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.94 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.94 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.94 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.94 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.94 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.94 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.94 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.93 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.93 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.93 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.92 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.92 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.91 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.91 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.91 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.9 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.9 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.9 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.9 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.89 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.89 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.88 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.88 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.88 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.87 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.87 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.87 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.86 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.86 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.86 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.86 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.86 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.85 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.85 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.85 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.84 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.84 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.83 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.83 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.83 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.82 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.81 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.81 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.8 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.8 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.8 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.8 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.8 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.8 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.79 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.79 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.78 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.78 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.78 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.78 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.76 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.76 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.76 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.74 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.74 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.58 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.73 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.73 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.72 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.72 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.72 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.69 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.69 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.68 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.68 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.66 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.66 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.65 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.65 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.62 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.55 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.52 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.51 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.51 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.45 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.4 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.39 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.39 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.36 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.32 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.28 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.18 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.17 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.13 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.11 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.1 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.08 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.96 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.92 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.9 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.62 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.44 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.41 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.38 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.38 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.31 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.25 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.2 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.07 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.02 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.93 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.91 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.76 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.72 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.67 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.65 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.42 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.72 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.55 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 95.43 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.31 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 95.09 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 94.81 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 93.07 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 91.2 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 90.58 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 89.87 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 89.77 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 87.34 | |
| 2pju_A | 225 | Propionate catabolism operon regulatory protein; s | 85.39 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 84.02 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 83.45 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 80.29 |
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=241.78 Aligned_cols=220 Identities=24% Similarity=0.379 Sum_probs=168.7
Q ss_pred CCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHhcCCCCc
Q 020871 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSS 141 (320)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 141 (320)
|.|++|+|+||+||||+|+...+..+|++++.++|++.+.. ......|.+... +..++...+...
T Consensus 1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~-------------~~~~~~g~~~~~~~~~~~~~~~~~~- 66 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQ-------------FNESLKGISRDESLRRILQHGGKEG- 66 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTT-------------GGGGGTTCCHHHHHHHHHHHTTCGG-
T ss_pred CCccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHH-------------HHHHHcCCCHHHHHHHHHHHhhccc-
Confidence 46789999999999999999999999999999999875441 122333444433 333444443321
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
..... ....+.......+...+.. ....++||+.++++.|+++|++++++||+.. ....++.+ |+.
T Consensus 67 ------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~-gl~ 133 (243)
T 4g9b_A 67 ------DFNSQ----ERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAAL-ELR 133 (243)
T ss_dssp ------GCCHH----HHHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHT-TCG
T ss_pred ------chhHH----HHHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhh-hhc
Confidence 01111 1122222333333333322 2346899999999999999999999999765 45678886 999
Q ss_pred cccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 221 RFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 221 ~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
.+ ||.++++++++.+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|+|+++.. .++..+++
T Consensus 134 ~~--fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~------~ad~~~~~ 205 (243)
T 4g9b_A 134 EF--FTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT------GAQLLLPS 205 (243)
T ss_dssp GG--CSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC------SCSEEESS
T ss_pred cc--cccccccccccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC------cHHHhcCC
Confidence 99 99999999999999999999999999999999999999999999999999999999988754 45678899
Q ss_pred ccccChhHHHHHHHHhh
Q 020871 301 LSNVRLKDLELLLQNVV 317 (320)
Q Consensus 301 ~~~~~~~~l~~~l~~~~ 317 (320)
..++++.+|.++++++.
T Consensus 206 ~~~l~~~~l~~~~~~l~ 222 (243)
T 4g9b_A 206 TESLTWPRLSAFWQNVA 222 (243)
T ss_dssp GGGCCHHHHHHHHHHHS
T ss_pred hhhcCHHHHHHHHHHHH
Confidence 99999999999998764
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-34 Score=235.74 Aligned_cols=214 Identities=24% Similarity=0.411 Sum_probs=164.6
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHH-HHHhcCCCCccccC
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTIFD 145 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 145 (320)
+|+|+||+||||+|+...+..+++++++++|.+.+. +.++...|........ .+...+..
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~------ 61 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTE-------------DLHRRIMGVPEREGLPILMEALEIK------ 61 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCH-------------HHHHHHTTSCHHHHHHHHHHHTTCC------
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhccchhhhhhhhhhcccch------
Confidence 689999999999999999999999999999986543 3344555655544333 33333322
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc
Q 020871 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL 225 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f 225 (320)
...+.+.+.+.+.+...+.+. ..++||+.++++.|++.|++++++||+........++.+ |+..+ |
T Consensus 62 ------~~~~~~~~~~~~~~~~~~~~~-----~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~-~l~~~--f 127 (216)
T 3kbb_A 62 ------DSLENFKKRVHEEKKRVFSEL-----LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRL-DLEKY--F 127 (216)
T ss_dssp ------SCHHHHHHHHHHHHHHHHHHH-----CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG--C
T ss_pred ------hhHHHHHHHHHHHHHHHHHHh-----cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhc-CCCcc--c
Confidence 122233333333333333333 578999999999999999999999999999999999987 99999 9
Q ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE-EeCCCCchhhccccceeccccccc
Q 020871 226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI-TYTSSTAEQDFKDAIAIYPDLSNV 304 (320)
Q Consensus 226 d~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~-v~~~~~~~~~l~~~~~~~~~~~~~ 304 (320)
|.++++++++.+||+|++|..+++++|++|++|+||||+.+|+++|+++||.+|+ +.++....+.+..+.. ....
T Consensus 128 d~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~----~~i~ 203 (216)
T 3kbb_A 128 DVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGA----VALV 203 (216)
T ss_dssp SEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTC----SEEE
T ss_pred cccccccccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCC----cEEC
Confidence 9999999999999999999999999999999999999999999999999999985 7777666665543321 1122
Q ss_pred ChhHHHHHHHHhh
Q 020871 305 RLKDLELLLQNVV 317 (320)
Q Consensus 305 ~~~~l~~~l~~~~ 317 (320)
++.++.++|++++
T Consensus 204 ~~~eli~~l~eLL 216 (216)
T 3kbb_A 204 KPEEILNVLKEVL 216 (216)
T ss_dssp CGGGHHHHHHHHC
T ss_pred CHHHHHHHHHHHC
Confidence 4667777777764
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=239.63 Aligned_cols=222 Identities=21% Similarity=0.350 Sum_probs=166.3
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccc
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (320)
..|+|+|+||+||||+|+...+..+|+++++++|++.+.. ......|.........+.+....
T Consensus 23 ~~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~-------------~~~~~~g~~~~~~~~~~~~~~~~---- 85 (250)
T 4gib_A 23 NAMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTK-------------FNESLKGISRMESLDRILEFGNK---- 85 (250)
T ss_dssp -CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTT-------------GGGGTTTCCHHHHHHHHHHHTTC----
T ss_pred cchhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHH-------------HHHHHhCcchHHHHHHhhhhhcC----
Confidence 3479999999999999999999999999999999875441 11222333333322222222111
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
......... ..+.+.....|...... ....++||+.++++.|++.|+++++.|+... ....++.+ |+..+
T Consensus 86 --~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~-gl~~~ 156 (250)
T 4gib_A 86 --KYSFSEEEK----VRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHL-GISDK 156 (250)
T ss_dssp --TTTSCHHHH----HHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHH-TCGGG
T ss_pred --CCCCCHHHH----HHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHhhhc-ccccc
Confidence 011112222 22333344444444322 2346899999999999999999998776543 56678887 99999
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccc
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~ 302 (320)
||.++++++++.+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|+|++. +.+..+++++.++.
T Consensus 157 --Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~----~~~~~ad~vi~~l~ 230 (250)
T 4gib_A 157 --FDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNY----ENLKKANLVVDSTN 230 (250)
T ss_dssp --CSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCT----TTTTTSSEEESSGG
T ss_pred --cceeecccccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECCh----hHhccCCEEECChH
Confidence 999999999999999999999999999999999999999999999999999999999654 34567899999999
Q ss_pred ccChhHHHHHHHHhh
Q 020871 303 NVRLKDLELLLQNVV 317 (320)
Q Consensus 303 ~~~~~~l~~~l~~~~ 317 (320)
+++++.|.+.+.+.+
T Consensus 231 eL~~~~i~~~~n~~~ 245 (250)
T 4gib_A 231 QLKFEYIQEKYNEYI 245 (250)
T ss_dssp GCCHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHH
Confidence 999999988777654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-31 Score=223.54 Aligned_cols=223 Identities=23% Similarity=0.284 Sum_probs=159.9
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccC-CCCccccCCCCChhHHHHHHHHhcCChhhHHHHHH-hc-CCCCc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-CDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFK-EH-GWPSS 141 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~ 141 (320)
|++|+|+||+||||+|+...+..++.++++++|++ ... .+.+....|.+.......+. .. ++...
T Consensus 2 M~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 69 (240)
T 2hi0_A 2 MKYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFT------------VEDIKNFFGSGVVVAVTRALAYEAGSSRE 69 (240)
T ss_dssp CSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHTTCCHH
T ss_pred CcccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCC------------HHHHHHhcCccHHHHHHHHHHhccccccc
Confidence 35899999999999999999999999999999875 222 13445555655443332221 00 11100
Q ss_pred cc------cC--CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHH
Q 020871 142 TI------FD--NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL 213 (320)
Q Consensus 142 ~~------~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l 213 (320)
.+ +. ....+... .+.+.+.+.+.|.... .....++||+.++|+.|+++|++++++||+........+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l 144 (240)
T 2hi0_A 70 SLVAFGTKDEQIPEAVTQTE----VNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV 144 (240)
T ss_dssp HHTTTTSTTCCCCTTCCHHH----HHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred ccccccccccccCCCCCHHH----HHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 00 00 00111111 2333334444444331 234578999999999999999999999999988888889
Q ss_pred HHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc-
Q 020871 214 ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK- 292 (320)
Q Consensus 214 ~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~- 292 (320)
+.+ |+. + |+.+++++++..+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|++.++....+.+.
T Consensus 145 ~~~-~l~-~--f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~ 220 (240)
T 2hi0_A 145 EEL-FPG-S--FDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQK 220 (240)
T ss_dssp HHH-STT-T--CSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHH
T ss_pred HHc-CCc-c--eeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHh
Confidence 887 888 7 89999999999999999999999999999999999999999999999999999999988765434332
Q ss_pred -ccceecccccccChhHHHHHH
Q 020871 293 -DAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 293 -~~~~~~~~~~~~~~~~l~~~l 313 (320)
.+++++. ++.+|.+++
T Consensus 221 ~~a~~~~~-----~~~el~~~l 237 (240)
T 2hi0_A 221 HGATVIVD-----TAEKLEEAI 237 (240)
T ss_dssp TTCCCEEC-----SHHHHHHHH
T ss_pred cCCCEEEC-----CHHHHHHHh
Confidence 3444444 455665554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-32 Score=222.70 Aligned_cols=206 Identities=14% Similarity=0.199 Sum_probs=153.3
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
|++|+|+||+||||+|+...+..++.++++++|.+... .+.+...+|.+.. ..+... +
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~---~~~~~~-~------ 59 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPD------------AKTIRGFMGPPLE---SSFATC-L------ 59 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCC------------HHHHHHTSSSCHH---HHHHTT-S------
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHcCccHH---HHHHHH-c------
Confidence 45899999999999999999999999999999875432 1234444454322 222221 1
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
+.....+ +.+.+.+.+.... .....++||+.++|+.|++ |++++++||+........++++ |+..+
T Consensus 60 -----~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~-gl~~~-- 125 (210)
T 2ah5_A 60 -----SKDQISE----AVQIYRSYYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNL-EIHHF-- 125 (210)
T ss_dssp -----CGGGHHH----HHHHHHHHHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHT-TCGGG--
T ss_pred -----CHHHHHH----HHHHHHHHHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhc-Cchhh--
Confidence 1112222 2222333333221 1235789999999999999 9999999999998888889886 99999
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc--ccceeccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK--DAIAIYPDLS 302 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~--~~~~~~~~~~ 302 (320)
|+.+++++ +.+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.++++.++....+.+. .+++++.+
T Consensus 126 f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~-- 201 (210)
T 2ah5_A 126 FDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK-- 201 (210)
T ss_dssp CSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--
T ss_pred eeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--
Confidence 99999887 7899999999999999999999999999999999999999999999998876544443 35555554
Q ss_pred ccChhHHHHHH
Q 020871 303 NVRLKDLELLL 313 (320)
Q Consensus 303 ~~~~~~l~~~l 313 (320)
+.+|.+++
T Consensus 202 ---~~el~~~l 209 (210)
T 2ah5_A 202 ---PLEVLAYF 209 (210)
T ss_dssp ---TTHHHHHT
T ss_pred ---HHHHHHHh
Confidence 44555443
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-31 Score=220.73 Aligned_cols=217 Identities=18% Similarity=0.269 Sum_probs=166.8
Q ss_pred CCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcc
Q 020871 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (320)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (320)
..+++|+|+||+||||+|+...+..++.+++.++|.... .+.+....|.+.......+.....
T Consensus 15 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~---- 77 (237)
T 4ex6_A 15 PAAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVS-------------RGAILSTVGRPLPASLAGLLGVPV---- 77 (237)
T ss_dssp --CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCC-------------HHHHHHHTTSCHHHHHHHHHTSCT----
T ss_pred CcccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCC-------------HHHHHHhcCccHHHHHHHHhCCCC----
Confidence 345899999999999999999999999999999983222 234555666665554443322211
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
....... +...+.+.+...+.. ....++||+.++|+.|++.|++++++||+........++.+ |+..
T Consensus 78 -------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~ 145 (237)
T 4ex6_A 78 -------EDPRVAE----ATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELT-GLDT 145 (237)
T ss_dssp -------TSHHHHH----HHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHH-TGGG
T ss_pred -------CHHHHHH----HHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-Cchh
Confidence 1222232 233333444443320 33579999999999999999999999999999899899887 9998
Q ss_pred ccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc--ccceecc
Q 020871 222 FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK--DAIAIYP 299 (320)
Q Consensus 222 ~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~--~~~~~~~ 299 (320)
+ |+.++++++++.+||++++|..+++++|++|++|++|||+.+|+++|+.+|+.+++|.++....+.+. .++++++
T Consensus 146 ~--f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~ 223 (237)
T 4ex6_A 146 R--LTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD 223 (237)
T ss_dssp T--CSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES
T ss_pred h--eeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC
Confidence 8 99999999999999999999999999999999999999999999999999999999998876655543 3555544
Q ss_pred cccccChhHHHHHHHH
Q 020871 300 DLSNVRLKDLELLLQN 315 (320)
Q Consensus 300 ~~~~~~~~~l~~~l~~ 315 (320)
++.+|.++|++
T Consensus 224 -----~~~el~~~l~~ 234 (237)
T 4ex6_A 224 -----SFPAAVTAVLD 234 (237)
T ss_dssp -----SHHHHHHHHHH
T ss_pred -----CHHHHHHHHHc
Confidence 57777777765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-31 Score=223.45 Aligned_cols=221 Identities=25% Similarity=0.336 Sum_probs=161.0
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 144 (320)
++|+|+||+||||+|+...+..++..+++++|..... +.+....|.+.... ..++...|...
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~---- 63 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDR-------------DMNERLKGISREESLESILIFGGAET---- 63 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTCCHHHHHHHHHHHTTCTT----
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHcCCCHHHHHHHHHHHhCCCC----
Confidence 3789999999999999999999999999999887433 34555566665543 34444444310
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
..+.... ..+...+.+.+...+.. ....++||+.++|+.|++.|++++++||+.. ....++.+ |+..+
T Consensus 64 ---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~-gl~~~- 132 (233)
T 3nas_A 64 ---KYTNAEK----QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRL-AIIDD- 132 (233)
T ss_dssp ---TSCHHHH----HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT-TCTTT-
T ss_pred ---CCCHHHH----HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHc-CcHhh-
Confidence 1122222 23333344445544322 1224899999999999999999999999865 67788886 99988
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.++++++++.+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+++++++ +.+..++++++++.+
T Consensus 133 -f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~----~~~~~ad~v~~s~~e 207 (233)
T 3nas_A 133 -FHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG----QPMLGADLVVRQTSD 207 (233)
T ss_dssp -CSEECCC---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGG
T ss_pred -cCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc----cccccCCEEeCChHh
Confidence 999999999999999999999999999999999999999999999999999999999765 334588999999999
Q ss_pred cChhHHHHHHHHhhhc
Q 020871 304 VRLKDLELLLQNVVAA 319 (320)
Q Consensus 304 ~~~~~l~~~l~~~~~~ 319 (320)
+.+..+.+++.++...
T Consensus 208 l~~~~~~~~~~~~~~~ 223 (233)
T 3nas_A 208 LTLELLHEEWEQYRIR 223 (233)
T ss_dssp CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999987764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=218.72 Aligned_cols=218 Identities=21% Similarity=0.350 Sum_probs=163.3
Q ss_pred CCCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHh-cCCC
Q 020871 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKE-HGWP 139 (320)
Q Consensus 62 ~~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~ 139 (320)
.+++++|+|+||+||||+|+...+..++.++++++|+.... +.+....|..... +...+.. ++..
T Consensus 19 ~~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~ 85 (243)
T 3qxg_A 19 HMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSR-------------EEAYMHEGRTGASTINIVFQRELGKE 85 (243)
T ss_dssp ---CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTSCHHHHHHHHHHHHHSSC
T ss_pred cccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHhCCCHHHHHHHHHHHHhCCC
Confidence 34567999999999999999999999999999999886543 2233344444332 2333332 3332
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCC
Q 020871 140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (320)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l 219 (320)
.+.... ..+...+.+.+... ....++||+.++|+.|++.|++++++||+........++. ++
T Consensus 86 ---------~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l 147 (243)
T 3qxg_A 86 ---------ATQEEI----ESIYHEKSILFNSY---PEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH--NF 147 (243)
T ss_dssp ---------CCHHHH----HHHHHHHHHHHHTS---SCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH--HS
T ss_pred ---------CCHHHH----HHHHHHHHHHHHhc---ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH--hH
Confidence 111221 22222222333221 3467999999999999999999999999998877777766 78
Q ss_pred ccccCc--ceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc--ccc
Q 020871 220 ERFEGL--DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK--DAI 295 (320)
Q Consensus 220 ~~~~~f--d~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~--~~~ 295 (320)
..+ | +.+++++++..+||+|++|..+++++|++|++|++|||+.+|+++|+.+|+.++++.++....+.+. .++
T Consensus 148 ~~~--f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad 225 (243)
T 3qxg_A 148 PGM--FHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGAD 225 (243)
T ss_dssp TTT--CCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCS
T ss_pred HHh--cCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCC
Confidence 888 8 8899999999999999999999999999999999999999999999999999999998877655542 344
Q ss_pred eecccccccChhHHHHHHHHhh
Q 020871 296 AIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 296 ~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
+++ -++.+|.++|++++
T Consensus 226 ~v~-----~s~~el~~~l~~li 242 (243)
T 3qxg_A 226 LLF-----PSMQTLCDSWDTIM 242 (243)
T ss_dssp EEE-----SCHHHHHHHHHHHT
T ss_pred EEE-----CCHHHHHHHHHhhh
Confidence 444 45778888888775
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=216.17 Aligned_cols=214 Identities=12% Similarity=0.164 Sum_probs=161.8
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccccC
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (320)
++|+|+||+||||+|+...+..++..+++++|...... +.+....|.+....... .++++
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~------------~~~~~~~g~~~~~~~~~--~~~~~------ 62 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDL------------SSLNKFVGPPLKTSFME--YYNFD------ 62 (226)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCG------------GGGGGGSSSCHHHHHHH--HHCCC------
T ss_pred CCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCH------------HHHHHHhCcCHHHHHHH--HhCCC------
Confidence 58999999999999999999999999999998764321 12233344433322111 11322
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc
Q 020871 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL 225 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f 225 (320)
... ...+...+.+.+.... .....++||+.++|+.|++.|++++++||+........++.+ |+..+ |
T Consensus 63 -----~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~--f 129 (226)
T 3mc1_A 63 -----EET----ATVAIDYYRDYFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHF-KLAFY--F 129 (226)
T ss_dssp -----HHH----HHHHHHHHHHHHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHT-TCGGG--C
T ss_pred -----HHH----HHHHHHHHHHHHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-CCHhh--e
Confidence 111 1222222333332211 123579999999999999999999999999999899899887 99988 9
Q ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc--cccceecccccc
Q 020871 226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSN 303 (320)
Q Consensus 226 d~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l--~~~~~~~~~~~~ 303 (320)
+.++++++++.+||+|++|..+++++|++|++|++|||+.+|+++|+.+|+.++++.++....+.+ ..++++++
T Consensus 130 ~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~---- 205 (226)
T 3mc1_A 130 DAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN---- 205 (226)
T ss_dssp SEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES----
T ss_pred eeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC----
Confidence 999999999999999999999999999999999999999999999999999999999887766655 34555544
Q ss_pred cChhHHHHHHHHhh
Q 020871 304 VRLKDLELLLQNVV 317 (320)
Q Consensus 304 ~~~~~l~~~l~~~~ 317 (320)
++.+|.+++.+.-
T Consensus 206 -s~~el~~~~~~~~ 218 (226)
T 3mc1_A 206 -SVDELHKKILELR 218 (226)
T ss_dssp -SHHHHHHHHHTC-
T ss_pred -CHHHHHHHHHHHh
Confidence 5778888887543
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=218.40 Aligned_cols=210 Identities=21% Similarity=0.370 Sum_probs=164.5
Q ss_pred CCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCc
Q 020871 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSS 141 (320)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 141 (320)
+.+++|+|+||+||||+|+...+..++.++++++|..... +.+....|...... ..++..+|+..
T Consensus 26 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~- 91 (250)
T 3l5k_A 26 PPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSW-------------DVKSLVMGKKALEAAQIIIDVLQLPM- 91 (250)
T ss_dssp CCCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHTTCCHHHHHHHHHHHHTCSS-
T ss_pred cccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCCC-
Confidence 3467999999999999999999999999999999876433 34455556555443 34455555431
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.. +.+...+.+.+...+ ....++||+.++|+.|++.|++++++||+........+....++..
T Consensus 92 -----------~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~ 154 (250)
T 3l5k_A 92 -----------SK----EELVEESQTKLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFS 154 (250)
T ss_dssp -----------CH----HHHHHHHHHHHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHT
T ss_pred -----------CH----HHHHHHHHHHHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHh
Confidence 11 222233333444433 2367999999999999999999999999998777766654337777
Q ss_pred ccCcceEEeCC--CCCCCCCCHHHHHHHHHHcCCCC--CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcccccee
Q 020871 222 FEGLDCFLAGD--DVKQKKPDPSIYVTAAKRLGISE--KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 297 (320)
Q Consensus 222 ~~~fd~v~~~~--~~~~~KP~~~~~~~~~~~l~~~~--~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~ 297 (320)
+ |+.+++++ +++.+||+|++|..+++++|++| ++|++|||+.+|+++|+++|+.++++.++....+....++++
T Consensus 155 ~--f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v 232 (250)
T 3l5k_A 155 L--FSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLV 232 (250)
T ss_dssp T--SSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEE
T ss_pred h--eeeEEecchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEe
Confidence 7 89999999 89999999999999999999998 999999999999999999999999999988766655678888
Q ss_pred cccccccC
Q 020871 298 YPDLSNVR 305 (320)
Q Consensus 298 ~~~~~~~~ 305 (320)
++++.++.
T Consensus 233 ~~sl~el~ 240 (250)
T 3l5k_A 233 LNSLQDFQ 240 (250)
T ss_dssp CSCGGGCC
T ss_pred ecCHHHhh
Confidence 88877654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=215.11 Aligned_cols=207 Identities=24% Similarity=0.340 Sum_probs=156.6
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHH-HhcCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~ 143 (320)
+++|+|+||+||||+|+...+..++.+++.++|..... +.+....|.........+ ...+..
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~---- 65 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDH-------------LPPSFFIGGNTKQVWENILRDEYDK---- 65 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTT-------------SCHHHHTTSCGGGCHHHHHGGGGGG----
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHcCCCHHHHHHHHHHhhcCC----
Confidence 46999999999999999999999999999999875433 123444555554443333 332211
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
... ..+...+.+.+..........++||+.++|+.|++.|++++++||+........++.+ |+..+
T Consensus 66 --------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~- 131 (214)
T 3e58_A 66 --------WDV----STLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEEN-RLQGF- 131 (214)
T ss_dssp --------SCH----HHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG-
T ss_pred --------CCH----HHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHc-CcHhh-
Confidence 111 1222223333332211111368999999999999999999999999999899999987 99988
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.++++++++.+||++++|..+++++|++|++|++|||+.+|+.+|+.+|+.+++++++...... ..+++++.++.+
T Consensus 132 -f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~a~~~~~~~~e 209 (214)
T 3e58_A 132 -FDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ-SAAKGLLDSLTD 209 (214)
T ss_dssp -CSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCC-TTSSEEESSGGG
T ss_pred -eeeEeecccccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchh-ccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999886544322 456667666554
Q ss_pred c
Q 020871 304 V 304 (320)
Q Consensus 304 ~ 304 (320)
+
T Consensus 210 l 210 (214)
T 3e58_A 210 V 210 (214)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-30 Score=214.39 Aligned_cols=216 Identities=22% Similarity=0.375 Sum_probs=160.4
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHh-cCCCCcc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKE-HGWPSST 142 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~~~~ 142 (320)
+++|+|+||+||||+|+...+..++.++++++|..... +......|..... ...++.. ++..
T Consensus 21 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~--- 84 (247)
T 3dv9_A 21 IDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSR-------------EEAYMHEGRTGASTINIVSRRERGHD--- 84 (247)
T ss_dssp CCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTSCHHHHHHHHHHHHHSSC---
T ss_pred CCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCChHHHHHHHHHHhcCCC---
Confidence 57999999999999999999999999999999886543 2233344444333 2333332 3332
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
.+.... ..+...+.+.+.. .....++||+.++|+.|++.|++++++||+........++. ++..+
T Consensus 85 ------~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~~ 149 (247)
T 3dv9_A 85 ------ATEEEI----KAIYQAKTEEFNK---CPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH--NFPGI 149 (247)
T ss_dssp ------CCHHHH----HHHHHHHHHHHTT---SCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH--HSTTT
T ss_pred ------CCHHHH----HHHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh--hHHHh
Confidence 111111 2222222222222 13467899999999999999999999999998877777776 78888
Q ss_pred cCc--ceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc--ccceec
Q 020871 223 EGL--DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK--DAIAIY 298 (320)
Q Consensus 223 ~~f--d~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~--~~~~~~ 298 (320)
| +.++++++++.+||+|++|..+++++|++|++|++|||+.+|+++|+.+|+.++++.++....+.+. .+++++
T Consensus 150 --f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~ 227 (247)
T 3dv9_A 150 --FQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF 227 (247)
T ss_dssp --CCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE
T ss_pred --cCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE
Confidence 8 8899999999999999999999999999999999999999999999999999999999877665543 345554
Q ss_pred ccccccChhHHHHHHHHhhh
Q 020871 299 PDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 299 ~~~~~~~~~~l~~~l~~~~~ 318 (320)
+ ++.+|.++|+.++.
T Consensus 228 ~-----~~~el~~~l~~~~~ 242 (247)
T 3dv9_A 228 H-----SMPDFNKNWETLQS 242 (247)
T ss_dssp S-----SHHHHHHHHHHHHH
T ss_pred C-----CHHHHHHHHHHHHH
Confidence 4 56777888877764
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-30 Score=213.56 Aligned_cols=216 Identities=22% Similarity=0.365 Sum_probs=165.5
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 143 (320)
+++|+|+||+||||+|+...+..++..++.++|+.... +.+....|...... ..++...+..
T Consensus 4 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~---- 66 (233)
T 3s6j_A 4 RPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAM-------------WRIHRKIGMSGGLMLKSLSRETGMS---- 66 (233)
T ss_dssp -CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHTTSCHHHHHHHHHHC--------
T ss_pred CcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCH-------------HHHHHHcCCcHHHHHHHHHHhcCCC----
Confidence 36899999999999999999999999999999886533 23444566655444 3344444332
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
.+... ...+...+.+.+.... ....++||+.++|+.|++.|++++++||+........++.+ |+..+
T Consensus 67 -----~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~- 133 (233)
T 3s6j_A 67 -----ITDEQ----AERLSEKHAQAYERLQ--HQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKAL-KLDIN- 133 (233)
T ss_dssp -----CCHHH----HHHHHHHHHHHHHHTG--GGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTT-TCCTT-
T ss_pred -----CCHHH----HHHHHHHHHHHHHHhh--ccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhc-chhhh-
Confidence 11222 2233333444444332 33578999999999999999999999999998888889886 99988
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccc--cceecccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD--AIAIYPDL 301 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~--~~~~~~~~ 301 (320)
|+.++++++++.+||++++|..+++++|++|++|++|||+.+|+.+|+.+|+.+++|.++....+.+.. ++++++
T Consensus 134 -f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~-- 210 (233)
T 3s6j_A 134 -KINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE-- 210 (233)
T ss_dssp -SSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--
T ss_pred -hheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--
Confidence 999999999999999999999999999999999999999999999999999999999887665555533 444444
Q ss_pred cccChhHHHHHHHHh
Q 020871 302 SNVRLKDLELLLQNV 316 (320)
Q Consensus 302 ~~~~~~~l~~~l~~~ 316 (320)
++.+|.++|++.
T Consensus 211 ---~~~el~~~l~~~ 222 (233)
T 3s6j_A 211 ---DPLDLLNHLDEI 222 (233)
T ss_dssp ---SHHHHHHTGGGT
T ss_pred ---CHHHHHHHHHHH
Confidence 577777777754
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-30 Score=213.42 Aligned_cols=211 Identities=22% Similarity=0.294 Sum_probs=156.4
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCC-CCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRC-DPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (320)
|++|+|+||+||||+|+...+..++.+++.++|.+. ... .+...+|.+.......+- +
T Consensus 1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-------------~~~~~~g~~~~~~~~~~~--~------ 59 (222)
T 2nyv_A 1 MSLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPD-------------NVTKYIGGGVRALLEKVL--K------ 59 (222)
T ss_dssp CEECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCS-------------CGGGGCSSCHHHHHHHHH--G------
T ss_pred CCCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHH-------------HHHHHhCcCHHHHHHHHh--C------
Confidence 358999999999999999999999999999998752 221 122233433322222111 0
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
..... .+...+.+.|.... .....++||+.++|+.|++.|++++++||+....+...++.+ |+..+
T Consensus 60 -------~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-gl~~~- 125 (222)
T 2nyv_A 60 -------DKFRE----EYVEVFRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDIL-NLSGY- 125 (222)
T ss_dssp -------GGCCT----HHHHHHHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG-
T ss_pred -------hHHHH----HHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCHHH-
Confidence 00001 11122233333221 234678999999999999999999999999998888888887 99888
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.++++++++.+||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++....+. ..++.++
T Consensus 126 -f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~----- 198 (222)
T 2nyv_A 126 -FDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL----- 198 (222)
T ss_dssp -CSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE-----
T ss_pred -heEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE-----
Confidence 999999999999999999999999999999999999999999999999999999999887654332 3334444
Q ss_pred cChhHHHHHHHHhh
Q 020871 304 VRLKDLELLLQNVV 317 (320)
Q Consensus 304 ~~~~~l~~~l~~~~ 317 (320)
-++.+|.+++++..
T Consensus 199 ~~~~el~~~l~~~~ 212 (222)
T 2nyv_A 199 SRPSDLVKLMDNHI 212 (222)
T ss_dssp SSTTHHHHHHHTTS
T ss_pred CCHHHHHHHHHHhh
Confidence 45677777777554
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-29 Score=211.38 Aligned_cols=216 Identities=20% Similarity=0.246 Sum_probs=157.6
Q ss_pred CCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHH-HHHHhcCCCCc
Q 020871 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSS 141 (320)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 141 (320)
...++|+|+||+||||+|+...+..++.+++.++|..... .+.+....|.+..... ..+....
T Consensus 19 ~~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~---- 82 (243)
T 2hsz_A 19 GMTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS------------ENLVMTWIGNGADVLSQRAVDWAC---- 82 (243)
T ss_dssp CCSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHH----
T ss_pred CCccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhCchHHHHHHHHhhhhh----
Confidence 3457899999999999999999999999999999876432 1234445555433322 2221100
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
..+ ........ .+.+.+.+.+.|...+ .....++||+.++|+.|++.|++++++||+....+...++.+ |+..
T Consensus 83 ~~~-~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-gl~~ 155 (243)
T 2hsz_A 83 KQA-EKELTEDE----FKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF-GIDH 155 (243)
T ss_dssp HHH-TCCCCHHH----HHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGG
T ss_pred ccc-cccCCHHH----HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHc-Cchh
Confidence 000 00011111 2222333344444432 234578999999999999999999999999998888889887 9998
Q ss_pred ccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhh--ccccceecc
Q 020871 222 FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD--FKDAIAIYP 299 (320)
Q Consensus 222 ~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~--l~~~~~~~~ 299 (320)
+ |+.++++++++..||+|++|..+++++|++|++|++|||+.+|+.+|+.+|+.++++.++...... ...+++++.
T Consensus 156 ~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~ 233 (243)
T 2hsz_A 156 L--FSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD 233 (243)
T ss_dssp G--CSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES
T ss_pred e--EEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC
Confidence 8 999999999999999999999999999999999999999999999999999999999887543222 234566665
Q ss_pred cccc
Q 020871 300 DLSN 303 (320)
Q Consensus 300 ~~~~ 303 (320)
++.+
T Consensus 234 ~~~e 237 (243)
T 2hsz_A 234 DFAD 237 (243)
T ss_dssp SGGG
T ss_pred CHHH
Confidence 5444
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=209.55 Aligned_cols=219 Identities=16% Similarity=0.233 Sum_probs=157.4
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChh--------hHHHHHHh
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP--------KMRWYFKE 135 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 135 (320)
+|++|+|+||+||||+|+...+..++.++++++|+.......+.+. .....+...+..+.. .+...+..
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYK---TINQGLWRAFEEGKMTRDEVVNTRFSALLKE 80 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHH---HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHH---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 4579999999999999999999999999999998865431100000 000000000001100 11223333
Q ss_pred cCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHH
Q 020871 136 HGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (320)
Q Consensus 136 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~ 215 (320)
+|++. .. ..+.+.|...+. ....++||+.++|+.|++. ++++++||+........++.
T Consensus 81 ~~~~~------------~~--------~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~ 138 (238)
T 3ed5_A 81 YGYEA------------DG--------ALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRD 138 (238)
T ss_dssp TTCCC------------CH--------HHHHHHHHHHHT-TCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHH
T ss_pred cCCCC------------cH--------HHHHHHHHHHHH-hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHH
Confidence 33221 00 122333444432 3367999999999999999 99999999999888888888
Q ss_pred hhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcC-CCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccc
Q 020871 216 LIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG-ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKD 293 (320)
Q Consensus 216 ~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~-~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~ 293 (320)
+ |+..+ |+.++++++++.+||+|++|..+++++| ++|++|++|||+. +|+++|+.+|+.+++++++.........
T Consensus 139 ~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ 215 (238)
T 3ed5_A 139 S-GLFPF--FKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEII 215 (238)
T ss_dssp T-TCGGG--CSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCC
T ss_pred c-ChHhh--hheEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCC
Confidence 7 99998 9999999999999999999999999999 9999999999998 9999999999999999887554333334
Q ss_pred cceecccccccChhHHHHHHHH
Q 020871 294 AIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 294 ~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
+++++. ++.+|.++|++
T Consensus 216 ad~v~~-----~~~el~~~l~~ 232 (238)
T 3ed5_A 216 PTYEIR-----KLEELYHILNI 232 (238)
T ss_dssp CSEEES-----SGGGHHHHHTC
T ss_pred CCeEEC-----CHHHHHHHHHh
Confidence 444444 56777787764
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=214.73 Aligned_cols=215 Identities=22% Similarity=0.310 Sum_probs=163.9
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHH-HHHhcCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 143 (320)
+++|+|+||+||||+|+...+..++.+++.++|..... .+.+....|........ ++..+|+..
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 90 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDL------------TEIAMYFTGQRFDGVLAYLAQQHDFVP--- 90 (259)
T ss_dssp CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCH------------HHHHHHTTTCCHHHHHHHHHHHHCCCC---
T ss_pred cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCH------------HHHHHHHhCCCHHHHHHHHHHHcCCCC---
Confidence 47999999999999999999999999999999876433 12344455665555443 333445431
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
.... ...+.+. +.+.+ ....++||+.++|+.|++.|++++++||+........++.+ |+..+
T Consensus 91 ------~~~~----~~~~~~~----~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~- 152 (259)
T 4eek_A 91 ------PPDF----LDVLETR----FNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVA-GLTEL- 152 (259)
T ss_dssp ------CTTH----HHHHHHH----HHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHT-TCHHH-
T ss_pred ------CHHH----HHHHHHH----HHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhc-ChHhh-
Confidence 1111 1222222 22222 44689999999999999999999999999998899899887 99988
Q ss_pred Ccce-EEeCCCCC-CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc----hhhcccccee
Q 020871 224 GLDC-FLAGDDVK-QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA----EQDFKDAIAI 297 (320)
Q Consensus 224 ~fd~-v~~~~~~~-~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~----~~~l~~~~~~ 297 (320)
|+. ++++++++ .+||++++|..+++++|++|++|++|||+.+|+++|+.+|+.+++++++... .+.+.. .
T Consensus 153 -f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~---~ 228 (259)
T 4eek_A 153 -AGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSR---L 228 (259)
T ss_dssp -HCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHH---H
T ss_pred -ccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHh---c
Confidence 898 99999999 9999999999999999999999999999999999999999999999887544 333321 1
Q ss_pred cccccccChhHHHHHHHHh
Q 020871 298 YPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 298 ~~~~~~~~~~~l~~~l~~~ 316 (320)
.+++..-++.+|.++|++.
T Consensus 229 ~ad~vi~~l~el~~~l~~~ 247 (259)
T 4eek_A 229 GAARVLTSHAELRAALAEA 247 (259)
T ss_dssp TCSEEECSHHHHHHHHHHT
T ss_pred CcchhhCCHHHHHHHHHhc
Confidence 1344444577888888754
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=215.78 Aligned_cols=220 Identities=16% Similarity=0.212 Sum_probs=157.5
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHH--------------hcCChhh----
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ--------------IGGGKPK---- 128 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~---- 128 (320)
+|+|+||+||||+|+...+..++..++.++|+.... ..+...+... .|.....
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 71 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEP---------SALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLD 71 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCH---------HHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCH---------HHHHHHHHHHHHHhhhhccccccccCCCHHHHHHH
Confidence 589999999999999888889999999999986433 1111111110 1111111
Q ss_pred -HHHHHHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchh
Q 020871 129 -MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (320)
Q Consensus 129 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~ 207 (320)
+...+...|+.. .+.+.......+........+.++||+.++|+.|++.|++++++||+...
T Consensus 72 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~ 134 (263)
T 3k1z_A 72 VVLQTFHLAGVQD-----------------AQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR 134 (263)
T ss_dssp HHHHHHHHTTCCC-----------------HHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred HHHHHHHHcCCCC-----------------HHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH
Confidence 122333333210 11122223334444332233579999999999999999999999998775
Q ss_pred hHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCC
Q 020871 208 SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 208 ~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
+...++.+ |+..+ |+.++++++++..||+|++|..+++++|++|++|+||||+. +|+++|+++|+.+++++++..
T Consensus 135 -~~~~l~~~-gl~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~ 210 (263)
T 3k1z_A 135 -LEGILGGL-GLREH--FDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQA 210 (263)
T ss_dssp -HHHHHHHT-TCGGG--CSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSC
T ss_pred -HHHHHHhC-CcHHh--hhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCC
Confidence 67788886 99988 99999999999999999999999999999999999999997 999999999999999998864
Q ss_pred chh-hccccceecccccccChhHHHHHHHHhhhc
Q 020871 287 AEQ-DFKDAIAIYPDLSNVRLKDLELLLQNVVAA 319 (320)
Q Consensus 287 ~~~-~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 319 (320)
... .+. ...+++..-++.+|.++|+++..+
T Consensus 211 ~~~~~~~---~~~ad~v~~~l~el~~~l~~~~~~ 241 (263)
T 3k1z_A 211 LDPVVRD---SVPKEHILPSLAHLLPALDCLEGS 241 (263)
T ss_dssp CCHHHHH---HSCGGGEESSGGGHHHHHHHHHHC
T ss_pred Cchhhcc---cCCCceEeCCHHHHHHHHHHHHhc
Confidence 432 111 112344444677888888877654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-28 Score=206.75 Aligned_cols=217 Identities=18% Similarity=0.223 Sum_probs=154.0
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCC-hhHHHHHHHHh---cC-ChhhHHHHHHhc-CCC
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD-PEFYDVLQNQI---GG-GKPKMRWYFKEH-GWP 139 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~---~~-~~~~~~~~~~~~-g~~ 139 (320)
++|+|+||+||||+|+...+..++.+++.+++..... .. .+.+..+.... .. ....+..++..+ |..
T Consensus 1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (241)
T 2hoq_A 1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLP-------VDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPY 73 (241)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCC-------SCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCC
T ss_pred CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHcccc-------ccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCc
Confidence 3789999999999999999989999998887432100 01 12222221110 00 011233344443 332
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCC
Q 020871 140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (320)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l 219 (320)
. .. ..+.+...+.+.+.. ...++||+.++|+.|++.|++++++||+........++.+ |+
T Consensus 74 ~----------~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l 133 (241)
T 2hoq_A 74 N----------PK----WISAGVIAYHNTKFA-----YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRL-EL 133 (241)
T ss_dssp C----------HH----HHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHT-TC
T ss_pred c----------ch----HHHHHHHHHHHHHHh-----hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHc-Cc
Confidence 1 01 112222222222221 2468999999999999999999999999988888888886 99
Q ss_pred ccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc---ccc
Q 020871 220 ERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK---DAI 295 (320)
Q Consensus 220 ~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~---~~~ 295 (320)
..+ |+.++++++++..||+|++|..+++++|++|++|++|||+. +|+++|+.+|+.++++.++......+. .++
T Consensus 134 ~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~ 211 (241)
T 2hoq_A 134 DDF--FEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYAD 211 (241)
T ss_dssp GGG--CSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCS
T ss_pred Hhh--ccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCC
Confidence 988 99999999999999999999999999999999999999998 999999999999999977765544442 344
Q ss_pred eecccccccChhHHHHHHHHh
Q 020871 296 AIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 296 ~~~~~~~~~~~~~l~~~l~~~ 316 (320)
+++. ++.+|.++++++
T Consensus 212 ~~i~-----~~~el~~~l~~~ 227 (241)
T 2hoq_A 212 YEID-----NLESLLEVLARE 227 (241)
T ss_dssp EEES-----STTHHHHHHHHC
T ss_pred EEEC-----CHHHHHHHHHHH
Confidence 4443 566777777654
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-30 Score=209.48 Aligned_cols=202 Identities=16% Similarity=0.273 Sum_probs=153.6
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
|++|+|+||+||||+|+...+..++.++++++|..... +.++...|.+.. ..+..+|++
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~---~~~~~~~~~----- 60 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP-------------AQAQKTFPMAAE---QAMTELGIA----- 60 (209)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH-------------HHHHHHTTSCHH---HHHHHTTCC-----
T ss_pred CcccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHcCCcHH---HHHHHcCCC-----
Confidence 46899999999999999999999999999998874332 344555555433 333444432
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
...... .+..+. +.+... .....++||+.++|+.|++. ++++++||+........++.+ |+..+
T Consensus 61 ------~~~~~~---~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~-~l~~~-- 124 (209)
T 2hdo_A 61 ------ASEFDH---FQAQYE-DVMASH--YDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSY-PFMMR-- 124 (209)
T ss_dssp ------GGGHHH---HHHHHH-HHHTTC--GGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTS-GGGGG--
T ss_pred ------HHHHHH---HHHHHH-HHHhhh--cccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHc-ChHhh--
Confidence 111111 111111 111110 13357899999999999999 999999999988888888886 88888
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.++++++.+..||+|++|..+++++|++|++|++|||+.+|+++|+.+|+.+++++++....+.+..+++++.++.+
T Consensus 125 f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~e 203 (209)
T 2hdo_A 125 MAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLD 203 (209)
T ss_dssp EEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGG
T ss_pred ccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHH
Confidence 8999999999999999999999999999999999999999999999999999999999776544555446666665544
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-28 Score=203.77 Aligned_cols=213 Identities=23% Similarity=0.418 Sum_probs=161.5
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccC-CCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHhcCCCCcccc
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-CDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIF 144 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~ 144 (320)
+|+|+||+||||+|+...+.+++.++++++|.. ... ..+....|.+... ...++...+..
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~----- 63 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDR-------------QFNEQLKGVSREDSLQKILDLADKK----- 63 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSH-------------HHHTTTTTCCHHHHHHHHHHHTTCC-----
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCH-------------HHHHHhCCCCHHHHHHHHHHHhCCC-----
Confidence 789999999999999999999999999998875 321 2233344544433 23444444431
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
.+.... ..+...+.+.+...+.. ....++||+.++|+.|++.|++++++||. ......++.+ ++..+
T Consensus 64 ----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~-~l~~~- 131 (221)
T 2wf7_A 64 ----VSAEEF----KELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERM-NLTGY- 131 (221)
T ss_dssp ----CCHHHH----HHHHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHT-TCGGG-
T ss_pred ----CChHHH----HHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHc-ChHHH-
Confidence 112222 22233333444443221 13568999999999999999999999998 4466677776 89888
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.++++++++..||+|++|..+++++|++|++|++|||+.||++||+.+|+.+++++.. +.+..++++++++.+
T Consensus 132 -f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~----~~~~~a~~v~~~~~e 206 (221)
T 2wf7_A 132 -FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP----EDLGDDIVIVPDTSH 206 (221)
T ss_dssp -CSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH----HHHCSSSEEESSGGG
T ss_pred -cceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCH----HHhccccchhcCHHh
Confidence 999999999999999999999999999999999999999999999999999999999642 344578899999999
Q ss_pred cChhHHHHHHH
Q 020871 304 VRLKDLELLLQ 314 (320)
Q Consensus 304 ~~~~~l~~~l~ 314 (320)
+.+..+.+.+.
T Consensus 207 l~~~~~~~~~~ 217 (221)
T 2wf7_A 207 YTLEFLKEVWL 217 (221)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHh
Confidence 98888776543
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=210.94 Aligned_cols=221 Identities=13% Similarity=0.198 Sum_probs=161.2
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHh-cccCCCCccccCCCCChhHHHHHHHHhcCChhh-HHHHHHhcCCCCcc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSH-FNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSST 142 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 142 (320)
|++|+|+||+||||+|+...+..++.+++.+ +|..... .+....|..... +..++..+|+..
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~~-- 65 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGST--------------GSHDFSGKMDGAIIYEVLSNVGLER-- 65 (234)
T ss_dssp -CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC-----------------CCTTCCHHHHHHHHHHTTTCCH--
T ss_pred CcceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCcc--------------chhhhcCCChHHHHHHHHHHcCCCc--
Confidence 3689999999999999999999999999888 6765431 122344555444 445555555421
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHC-CCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.........+...+...+.+.+......++||+.++|+.|++. |++++++||+........++.+ |+..
T Consensus 66 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~ 135 (234)
T 2hcf_A 66 ---------AEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDH 135 (234)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT-TCST
T ss_pred ---------ccchhHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHC-Cchh
Confidence 1001112233333444444332113356899999999999999 9999999999998888888886 9998
Q ss_pred ccCcceEEeCCCCC-CCCCCHHHHHHHHHHcC--CCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccc--cce
Q 020871 222 FEGLDCFLAGDDVK-QKKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD--AIA 296 (320)
Q Consensus 222 ~~~fd~v~~~~~~~-~~KP~~~~~~~~~~~l~--~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~--~~~ 296 (320)
+ |+.++++++.. .+||.+.+|..+++++| ++|++|++|||+.+|+++|+++|+.++++.++....+.+.. +++
T Consensus 136 ~--f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~ 213 (234)
T 2hcf_A 136 Y--FPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGT 213 (234)
T ss_dssp T--CSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSE
T ss_pred h--cCcceecCCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCE
Confidence 8 88777777764 46788999999999999 99999999999999999999999999999988766555432 555
Q ss_pred ecccccccChhHHHHHHHHhhh
Q 020871 297 IYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 297 ~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
++++ +.+|.++|+++..
T Consensus 214 v~~~-----~~el~~~l~~~~~ 230 (234)
T 2hcf_A 214 LFKN-----FAETDEVLASILT 230 (234)
T ss_dssp EESC-----SCCHHHHHHHHHC
T ss_pred EeCC-----HHhHHHHHHHHhc
Confidence 5554 5667777776653
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-29 Score=209.89 Aligned_cols=209 Identities=11% Similarity=0.160 Sum_probs=158.5
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccccC
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (320)
++|+|+||+||||+|+...+..++..++.++|..... +.+....|...... +...++++
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~--~~~~~~~~------ 86 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDL-------------ENLDQFIGPPLHDT--FKEYYKFE------ 86 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCG-------------GGGGGGSSSCHHHH--HHHTSCCC------
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCccHHHH--HHHHhCCC------
Confidence 5899999999999999999999999999999877322 12222333332221 11112222
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc
Q 020871 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL 225 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f 225 (320)
.... ..+...+.+.+.... .....++||+.++|+.|++.|++++++||+........++.+ |+..+ |
T Consensus 87 -----~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f 153 (240)
T 3sd7_A 87 -----DKKA----KEAVEKYREYFADKG-IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYF-DIDRY--F 153 (240)
T ss_dssp -----HHHH----HHHHHHHHHHHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCGGG--C
T ss_pred -----HHHH----HHHHHHHHHHHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHc-CcHhh--E
Confidence 2222 222233333333321 233579999999999999999999999999999899899887 99988 9
Q ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc--cccceeccccc
Q 020871 226 DCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLS 302 (320)
Q Consensus 226 d~v~~~~~~~~~KP~~~~~~~~~~~l~~~-~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l--~~~~~~~~~~~ 302 (320)
+.++++++.+.+||++++|..+++++|++ |++|++|||+.+|+++|+.+|+.++++.++....+.+ ..++.++++
T Consensus 154 ~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~-- 231 (240)
T 3sd7_A 154 KYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN-- 231 (240)
T ss_dssp SEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--
Confidence 99999999999999999999999999999 9999999999999999999999999999887776665 456666665
Q ss_pred ccChhHHHHHH
Q 020871 303 NVRLKDLELLL 313 (320)
Q Consensus 303 ~~~~~~l~~~l 313 (320)
+.+|.++|
T Consensus 232 ---~~el~~~l 239 (240)
T 3sd7_A 232 ---VESIKDIL 239 (240)
T ss_dssp ---STTHHHHH
T ss_pred ---HHHHHHHh
Confidence 44555543
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=210.26 Aligned_cols=206 Identities=16% Similarity=0.192 Sum_probs=151.6
Q ss_pred CCCccEEEEecCCccccchHHHHHHH-HHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcc
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAY-NDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (320)
++++|+|+||+||||+|+...+..++ .+++.++|..... +....+... ...+....
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~---------------~~~~~g~~~---~~~~~~~~----- 78 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNID---------------LDSIPNSTI---PKYLITLL----- 78 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCC---------------CTTSCTTTH---HHHHHHHH-----
T ss_pred cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHH---------------HHHHhCccH---HHHHHHHh-----
Confidence 45799999999999999998888888 9999988876422 011112111 11111110
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
... .......+.+.+..........++||+.++|+.|++.|++++++||+........++.+ |+..+
T Consensus 79 --------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~ 145 (231)
T 3kzx_A 79 --------GKR----WKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHK-NLTHY 145 (231)
T ss_dssp --------GGG----HHHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCGGG
T ss_pred --------Cch----HHHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHC-Cchhh
Confidence 000 11112222222221111245678999999999999999999999999999899999887 99998
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC-CEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccc
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK-DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL 301 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~-~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~ 301 (320)
|+.++++++++.+||++++|..+++++|++|+ +|++|||+.+|+++|+++|+.+|++.++.. ..+++
T Consensus 146 --f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----------~~~~~ 213 (231)
T 3kzx_A 146 --FDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI----------IKDIL 213 (231)
T ss_dssp --CSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC---------------CCE
T ss_pred --eeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC----------CCCce
Confidence 99999999999999999999999999999999 999999999999999999999999965533 12334
Q ss_pred cccChhHHHHHHHHhh
Q 020871 302 SNVRLKDLELLLQNVV 317 (320)
Q Consensus 302 ~~~~~~~l~~~l~~~~ 317 (320)
..-++.+|.++|.+++
T Consensus 214 ~~~~~~el~~~l~~~l 229 (231)
T 3kzx_A 214 SFKNFYDIRNFICQLI 229 (231)
T ss_dssp EESSHHHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHHh
Confidence 4456788888888775
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=211.15 Aligned_cols=194 Identities=21% Similarity=0.297 Sum_probs=144.4
Q ss_pred CCCccEEEEecCCccccchHHH-HHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh-----------HHH
Q 020871 64 SQSLQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-----------MRW 131 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 131 (320)
++++|+|+||+||||+|+.... ..++..++.++|+..... .++...+..... ...
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQA-------------EAREPMGTEKSEHIRRMLGNSRIANA 77 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHH-------------HHHTTTTSCHHHHHHHHTTSHHHHHH
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHH-------------HHHHHhcCchHHHHHHhccchHHHHH
Confidence 3469999999999999987655 789999999998875432 223333332211 111
Q ss_pred HHHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHH
Q 020871 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (320)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~ 211 (320)
+...++.. .+......+. ..+.+.+...+.. ...++||+.++|+.|++.|++++++||+.......
T Consensus 78 ~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~ 143 (277)
T 3iru_A 78 WLSIKGQA---------SNEEDIKRLY----DLFAPIQTRIVAQ-RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAP 143 (277)
T ss_dssp HHHHHSSC---------CCHHHHHHHH----HHHHHHHHHHHHH-TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred HHHHhccC---------CCHHHHHHHH----HHHHHHHHHHhhc-cCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHH
Confidence 22222321 1222223222 3333333333322 35799999999999999999999999999988888
Q ss_pred HHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 212 ~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~-~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
.++.+ ++..++ |+.+++++++..+||++.+|..+++++|++| ++|++|||+.+|+++|+.+|+.+++|.++..
T Consensus 144 ~l~~~-~~~~~~-~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~ 217 (277)
T 3iru_A 144 ALIAA-KEQGYT-PASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGN 217 (277)
T ss_dssp HHHHH-HHTTCC-CSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred HHHhc-CcccCC-CceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence 88886 655431 6899999999999999999999999999999 9999999999999999999999999999864
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=206.86 Aligned_cols=215 Identities=18% Similarity=0.245 Sum_probs=154.0
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHH-------hcCCh---h-----hH
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ-------IGGGK---P-----KM 129 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~-----~~ 129 (320)
|++|+|+||+||||+|+...+..++.++++++|....... ...+...+... ...+. . .+
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDS------FDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRF 76 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSS------HHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCC------HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 5799999999999999999999999999999987642100 01111111110 00000 0 12
Q ss_pred HHHHHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhH
Q 020871 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV 209 (320)
Q Consensus 130 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~ 209 (320)
...+...|++. .... ..+.+.|...+. ....++||+.++|+.|+ .|++++++||+.....
T Consensus 77 ~~~~~~~~~~~--------------~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~ 136 (240)
T 3qnm_A 77 FYPLQAVGVED--------------EALA----ERFSEDFFAIIP-TKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQ 136 (240)
T ss_dssp HHHHHHTTCCC--------------HHHH----HHHHHHHHHHGG-GCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHH
T ss_pred HHHHHHcCCCc--------------HHHH----HHHHHHHHHHhh-hcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHH
Confidence 23333333320 1111 222223333321 33578999999999999 9999999999999888
Q ss_pred HHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCch
Q 020871 210 ILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAE 288 (320)
Q Consensus 210 ~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~ 288 (320)
...++.+ |+..+ |+.++++++++.+||++++|..+++++|++|++|++|||++ +|+++|+.+|+.+++++++...
T Consensus 137 ~~~l~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~- 212 (240)
T 3qnm_A 137 SRKMRSA-GVDRY--FKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERT- 212 (240)
T ss_dssp HHHHHHH-TCGGG--CSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCC-
T ss_pred HHHHHHc-ChHhh--ceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCC-
Confidence 8888887 99988 99999999999999999999999999999999999999996 9999999999999999988751
Q ss_pred hhccccceecccccccChhHHHHHHH
Q 020871 289 QDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 289 ~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
.....+++++ -++.|+..+.+
T Consensus 213 ~~~~~~d~vi-----~sl~e~~~~~~ 233 (240)
T 3qnm_A 213 VFPFQPTYHI-----HSLKELMNLLE 233 (240)
T ss_dssp CCSSCCSEEE-----SSTHHHHHHTC
T ss_pred CcCCCCceEE-----CCHHHHHHHHh
Confidence 1122344444 45666666554
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=203.70 Aligned_cols=214 Identities=14% Similarity=0.128 Sum_probs=152.6
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHH--------Hh--cCChhh----HHH
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN--------QI--GGGKPK----MRW 131 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~~----~~~ 131 (320)
++|+|+||+||||+|+...+.+.+.++++++|..... .....+.. .. |.+... ...
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 72 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKD----------VANAVIEVRNEIKKMRAQASEDPRKVLTGSQEA 72 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHH----------HHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHH
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcH----------HHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHH
Confidence 4899999999999999998999999999988765321 00011111 11 333321 112
Q ss_pred HHHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCc---hhh
Q 020871 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAAT---KSS 208 (320)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~---~~~ 208 (320)
+...+|++ ... ...+ . +.+...+ ....++||+.++|+.|++.|++++++||+. ...
T Consensus 73 ~~~~~~~~-----------~~~----~~~~---~-~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~ 131 (235)
T 2om6_A 73 LAGKLKVD-----------VEL----VKRA---T-ARAILNV--DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSY 131 (235)
T ss_dssp HHHHHTCC-----------HHH----HHHH---H-HHHHHHC--CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHH
T ss_pred HHHHhCCC-----------HHH----HHHH---H-HHHHHhc--cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhH
Confidence 22222322 011 1111 1 1122221 112469999999999999999999999998 887
Q ss_pred HHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCc
Q 020871 209 VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 209 ~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
....++.+ ++..+ |+.++++++++..||+|++|..+++++|++|++|++|||+. ||+++|+.+|+.+++++++...
T Consensus 132 ~~~~l~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~ 208 (235)
T 2om6_A 132 TRLLLERF-GLMEF--IDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDK 208 (235)
T ss_dssp HHHHHHHT-TCGGG--CSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCS
T ss_pred HHHHHHhC-CcHHH--hhhheeccccCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCC
Confidence 88888886 99988 99999999999999999999999999999999999999999 9999999999999999987533
Q ss_pred hhhccccceecccccccChhHHHHHHHHhhh
Q 020871 288 EQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 288 ~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
.+....+++++ -++.+|.++|+++.+
T Consensus 209 ~~~~~~~~~~~-----~~~~el~~~l~~~~~ 234 (235)
T 2om6_A 209 VRKLEERGFEI-----PSIANLKDVIELISK 234 (235)
T ss_dssp CEEEETTEEEE-----SSGGGHHHHHHHTC-
T ss_pred cccCCCCcchH-----hhHHHHHHHHHHHhc
Confidence 22222344444 356778888877653
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-28 Score=200.01 Aligned_cols=210 Identities=22% Similarity=0.368 Sum_probs=157.1
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 144 (320)
++|+|+||+||||+++...+..++..++.++|...... +.+....|...... ..++...++.
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~------------~~~~~~~g~~~~~~~~~~~~~~~~~----- 70 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRR------------NELPDTLGLRIDMVVDLWYARQPWN----- 70 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGG------------GGSCCCTTCCHHHHHHHHHHHSCCS-----
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChH------------HHHHHHhCCCHHHHHHHHHHHcCCC-----
Confidence 58999999999999999999999999999988754310 01111233333222 2233333332
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
..........+...+.+.+.. ...++|++.++|+.|++.|++++++||.........++.+ ++..+
T Consensus 71 ------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~~~~~-- 136 (226)
T 1te2_A 71 ------GPSRQEVVERVIARAISLVEE-----TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF-DLRDS-- 136 (226)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred ------ccCHHHHHHHHHHHHHHHHhc-----cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-CcHhh--
Confidence 111222222222222222222 2478999999999999999999999999988888888886 99888
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhh-ccccceecccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD-FKDAIAIYPDLSN 303 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~-l~~~~~~~~~~~~ 303 (320)
|+.++++++.+..||++..+..+++++|+++++|++|||+.||+++++.+|+.+++++++....+. ...++++++++.+
T Consensus 137 ~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~e 216 (226)
T 1te2_A 137 FDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTE 216 (226)
T ss_dssp CSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGG
T ss_pred CcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHH
Confidence 899999999999999999999999999999999999999999999999999999999887654433 3567888888777
Q ss_pred cCh
Q 020871 304 VRL 306 (320)
Q Consensus 304 ~~~ 306 (320)
+..
T Consensus 217 l~~ 219 (226)
T 1te2_A 217 LTA 219 (226)
T ss_dssp CCH
T ss_pred HhH
Confidence 654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-28 Score=200.68 Aligned_cols=215 Identities=18% Similarity=0.244 Sum_probs=156.7
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
|++|+|+||+||||+|+...+.+++.++++++|..... .+.+...+|.........+... .
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~--~----- 64 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGIT------------DDMIKRTIGKTLEESFSILTGI--T----- 64 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHTTTTSCHHHHHHHHHCC--C-----
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCC------------HHHHHHHhCCcHHHHHHHHcCC--C-----
Confidence 45899999999999999999999999999998875322 1234445555544333322111 0
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
... ....+...+...+...+. ....++|++.++++.|++.|++++++||.........++.+ ++..+
T Consensus 65 -----~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~-~~~~~-- 131 (225)
T 3d6j_A 65 -----DAD----QLESFRQEYSKEADIYMN-ANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH-MPDDW-- 131 (225)
T ss_dssp -----CHH----HHHHHHHHHHHHHHHHTG-GGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTS-SCTTC--
T ss_pred -----CHH----HHHHHHHHHHHHHHHhcc-ccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHc-Cchhh--
Confidence 111 122233333344444322 23568999999999999999999999999988888888886 88888
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccc--cceeccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD--AIAIYPDLS 302 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~--~~~~~~~~~ 302 (320)
|+.++++++++..||++.+|..+++++|+++++|++|||+.+|++|++.+|+.++++.++....+.+.. +++++++
T Consensus 132 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~-- 209 (225)
T 3d6j_A 132 FDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIST-- 209 (225)
T ss_dssp CSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESS--
T ss_pred eeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECC--
Confidence 899999999999999999999999999999999999999999999999999999999887665555532 5666655
Q ss_pred ccChhHHHHHHHHh
Q 020871 303 NVRLKDLELLLQNV 316 (320)
Q Consensus 303 ~~~~~~l~~~l~~~ 316 (320)
+.+|.++++++
T Consensus 210 ---~~el~~~l~~~ 220 (225)
T 3d6j_A 210 ---LGQLISVPEDK 220 (225)
T ss_dssp ---GGGGC------
T ss_pred ---HHHHHHhhhhh
Confidence 44555666554
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-27 Score=201.35 Aligned_cols=132 Identities=20% Similarity=0.324 Sum_probs=110.6
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
...++||+.++|+.|++ +++++++||+........++.+ |+..+ |+.++++++++.+||+|++|..+++++|++|+
T Consensus 119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~-gl~~~--f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 194 (260)
T 2gfh_A 119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC-ACQSY--FDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPG 194 (260)
T ss_dssp TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHH-TCGGG--CSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGG
T ss_pred cCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhc-CHHhh--hheEEecCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 35799999999999998 5999999999999888899887 99999 99999999999999999999999999999999
Q ss_pred CEEEEecC-HhhHHHHHHcCC-eEEEEeCCCCchhhc-cccceecccccccChhHHHHHHHHhh
Q 020871 257 DCLVVEDS-VIGLQAATRAGM-ACVITYTSSTAEQDF-KDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 257 ~~v~VGD~-~~Dv~~a~~aG~-~~v~v~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
+|+||||+ .+|+++|+++|+ .++++.++....... ..++++ ..++.+|.++++++.
T Consensus 195 ~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~-----i~~~~el~~~l~~~~ 253 (260)
T 2gfh_A 195 DCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYM-----VSSVLELPALLQSID 253 (260)
T ss_dssp GEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEE-----ESSGGGHHHHHHHHT
T ss_pred hEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEE-----ECCHHHHHHHHHHHh
Confidence 99999996 899999999999 799997654321111 233344 445677777777654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-28 Score=197.88 Aligned_cols=202 Identities=14% Similarity=0.234 Sum_probs=150.1
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhc-CChhhHHHHHH-hcCCCCcc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG-GGKPKMRWYFK-EHGWPSST 142 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~g~~~~~ 142 (320)
|++|+|+||+||||+|+...+.+++.++++++|+.... ..++...| .+.......+. ..+++
T Consensus 2 M~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~--- 65 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDK-------------EKVREFIFKYSVQDLLVRVAEDRNLD--- 65 (207)
T ss_dssp --CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCH-------------HHHHHHHHHSCHHHHHHHHHHHHTCC---
T ss_pred CcccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHHccccHHHHHHHhhchhhcc---
Confidence 46899999999999999999999999999988774322 33444455 44443333322 11110
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccc
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~ 222 (320)
. .+...+...+.+.+ .....++|++.++|+.|++.|++++++||+...... .++.+ ++..+
T Consensus 66 ------------~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~-~~~~~ 126 (207)
T 2go7_A 66 ------------V----EVLNQVRAQSLAEK-NAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDL-GVESY 126 (207)
T ss_dssp ------------H----HHHHHHHHHHHTTC-GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHH-TCGGG
T ss_pred ------------H----HHHHHHHHHHHHhc-cccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHc-Cchhh
Confidence 1 11112222222221 123568999999999999999999999999988888 88876 99888
Q ss_pred cCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccc
Q 020871 223 EGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302 (320)
Q Consensus 223 ~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~ 302 (320)
|+.++++++.+..||++++|..+++++|++|++|++|||+.+|+++++.+|+.++++.++. . .+++++.
T Consensus 127 --f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~--- 195 (207)
T 2go7_A 127 --FTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQ--- 195 (207)
T ss_dssp --EEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECS---
T ss_pred --eeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeC---
Confidence 8999999999999999999999999999999999999999999999999999999988765 2 3455554
Q ss_pred ccChhHHHHHHH
Q 020871 303 NVRLKDLELLLQ 314 (320)
Q Consensus 303 ~~~~~~l~~~l~ 314 (320)
++.+|.++++
T Consensus 196 --~~~el~~~l~ 205 (207)
T 2go7_A 196 --ALADISRIFE 205 (207)
T ss_dssp --STTHHHHHTS
T ss_pred --CHHHHHHHHh
Confidence 4556666654
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=203.22 Aligned_cols=213 Identities=18% Similarity=0.217 Sum_probs=150.2
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhc--------CCh-----hhHHH
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG--------GGK-----PKMRW 131 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-----~~~~~ 131 (320)
+++|+|+||+||||+|+...+..++.+++.++|..... ..+...+..... ... .....
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTS---------DELLEVFGRNESPQQTETPGALYQDILRAVYDR 74 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCH---------HHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHH
T ss_pred ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCH---------HHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHH
Confidence 46899999999999999999999999999998876533 112221211100 000 11223
Q ss_pred HHHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHH
Q 020871 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (320)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~ 211 (320)
++..++++. . .. ....+...+ ....++||+.++|+.|++ |++++++||+.......
T Consensus 75 ~~~~~~~~~---------~----~~--------~~~~~~~~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~ 130 (240)
T 3smv_A 75 IAKEWGLEP---------D----AA--------EREEFGTSV--KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKL 130 (240)
T ss_dssp HHHHTTCCC---------C----HH--------HHHHHHTGG--GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHH
T ss_pred HHHHhCCCC---------C----HH--------HHHHHHHHH--hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHH
Confidence 334444321 0 00 111122221 235799999999999999 79999999999887777
Q ss_pred HHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHH---HHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCC--
Q 020871 212 CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA---AKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSS-- 285 (320)
Q Consensus 212 ~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~---~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~-- 285 (320)
.++. +..+ |+.++++++++..||+|++|..+ ++++|++|++|++|||+. +|+++|+.+|+.+++++++.
T Consensus 131 ~l~~---l~~~--fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~ 205 (240)
T 3smv_A 131 SNAK---LGVE--FDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGK 205 (240)
T ss_dssp HHTT---TCSC--CSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-
T ss_pred HHHh---cCCc--cCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcc
Confidence 7655 4566 89999999999999999999999 899999999999999997 99999999999999998762
Q ss_pred ----CchhhccccceecccccccChhHHHHHHHHhhh
Q 020871 286 ----TAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 286 ----~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
...+.. ....+++..-++.+|.++|++++.
T Consensus 206 ~g~g~~~~~~---~~~~ad~v~~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 206 EGYGATHVPS---RMPNVDFRFNSMGEMAEAHKQALK 239 (240)
T ss_dssp ------CCCS---SCCCCSEEESSHHHHHHHHHHHHH
T ss_pred cCCCCCCCCc---CCCCCCEEeCCHHHHHHHHHHHhc
Confidence 111111 112344444467788888887653
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-28 Score=200.67 Aligned_cols=132 Identities=17% Similarity=0.310 Sum_probs=116.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++. ++++++||+........++.+ |+..+ |+.++++++++..||++++|..+++++|++|++
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~-~~~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 174 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDAL-GIKDL--FDSITTSEEAGFFKPHPRIFELALKKAGVKGEE 174 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHc-CcHHH--cceeEeccccCCCCcCHHHHHHHHHHcCCCchh
Confidence 47899999999999999 999999999998888888886 99988 999999999999999999999999999999999
Q ss_pred EEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhhh
Q 020871 258 CLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 258 ~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
|++|||+. ||+++|+.+|+.+++++++....+.+..+++++ -++.+|.++|+++..
T Consensus 175 ~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~-----~~~~el~~~l~~~~~ 231 (234)
T 3u26_A 175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV-----SDLREVIKIVDELNG 231 (234)
T ss_dssp EEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE-----SSTHHHHHHHHHHC-
T ss_pred EEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee-----CCHHHHHHHHHHHhh
Confidence 99999998 999999999999999999876655544455554 457788888887654
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-28 Score=205.59 Aligned_cols=127 Identities=19% Similarity=0.209 Sum_probs=108.3
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
...++||+.++|+.|+++|++++|+||++.......++.+ .|+..+ |+.++++ +++ +||+|++|..+++++|++
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~--fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~ 203 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--VDGHFDT-KIG-HKVESESYRKIADSIGCS 203 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG--CSEEECG-GGC-CTTCHHHHHHHHHHHTSC
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh--ccEEEec-CCC-CCCCHHHHHHHHHHhCcC
Confidence 4679999999999999999999999999998888888753 268888 9999998 888 999999999999999999
Q ss_pred CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchh-hc-cccceecccccccChh
Q 020871 255 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-DF-KDAIAIYPDLSNVRLK 307 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~-~l-~~~~~~~~~~~~~~~~ 307 (320)
|++|+||||+.+|+.+|+++|+.+|++.++..... .. ..++.++.++.++.+.
T Consensus 204 p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~~~ 258 (261)
T 1yns_A 204 TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELYLP 258 (261)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCBC-
T ss_pred cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhCcC
Confidence 99999999999999999999999999977544322 11 3467788888776543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=202.85 Aligned_cols=192 Identities=18% Similarity=0.241 Sum_probs=141.5
Q ss_pred CCccEEEEecCCccccchH-HHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHH----------
Q 020871 65 QSLQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF---------- 133 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 133 (320)
|++|+|+||+||||+|+.. .+..++..+++++|+.... +.+....|.........+
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 70 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITA-------------EEARKPMGLLKIDHVRALTEMPRIASEW 70 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCH-------------HHHHTTTTSCHHHHHHHHHHSHHHHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCH-------------HHHHHHhccchHHHHHHhcccHHHHHHH
Confidence 4689999999999999987 6788999999998876432 223333343322211111
Q ss_pred -HhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHH
Q 020871 134 -KEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (320)
Q Consensus 134 -~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~ 212 (320)
..++.. .+.... ..+...+.+.+...+ .....++||+.++|..|++.|++++++||+........
T Consensus 71 ~~~~~~~---------~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~ 136 (267)
T 1swv_A 71 NRVFRQL---------PTEADI----QEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIV 136 (267)
T ss_dssp HHHHSSC---------CCHHHH----HHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHH
T ss_pred HHHhCCC---------CCHHHH----HHHHHHHHHHHHHhh-ccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHH
Confidence 111211 111111 222222333333322 22357899999999999999999999999998888888
Q ss_pred HHHhhCCccccCc-ceEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 213 LENLIGMERFEGL-DCFLAGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 213 l~~~~~l~~~~~f-d~v~~~~~~~~~KP~~~~~~~~~~~l~~~~-~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
++.+ ++..+ | +.+++++++..+||+|++|..+++++|+++ ++|++|||+.||+++++.+|+.++++.++..
T Consensus 137 l~~~-~~~~~--~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 137 AKEA-ALQGY--KPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp HHHH-HHTTC--CCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCT
T ss_pred HHHc-CCccc--ChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCC
Confidence 8886 77666 5 888888889999999999999999999999 9999999999999999999999999998865
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=196.48 Aligned_cols=136 Identities=21% Similarity=0.271 Sum_probs=115.7
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
....++||+.++|+.|++.|++++++||+........++.+ |+..+ |+.++++++++.+||++++|..+++++|++|
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 169 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNS-GLTNS--FDHLISVDEVRLFKPHQKVYELAMDTLHLGE 169 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH-TCGGG--CSEEEEGGGTTCCTTCHHHHHHHHHHHTCCG
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHC-CChhh--cceeEehhhcccCCCChHHHHHHHHHhCCCc
Confidence 34679999999999999999999999999999888889887 99988 9999999999999999999999999999999
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhhh
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
++|++|||+.+|+++|+.+|+.+++++++....+.+. ..+++..-++.+|.++|+++-+
T Consensus 170 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~el~~~l~~~~~ 228 (230)
T 3um9_A 170 SEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLG----VVPDIVVSDVGVLASRFSPVDE 228 (230)
T ss_dssp GGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSS----CCCSEEESSHHHHHHTCCC---
T ss_pred ccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCcccccc----CCCcEEeCCHHHHHHHHHHhhh
Confidence 9999999999999999999999999998865544332 2234444457777777776543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-28 Score=202.23 Aligned_cols=131 Identities=18% Similarity=0.300 Sum_probs=115.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.|++++++||+........++.+ |+..+ |+.++++++++.+||+|++|..+++++|++|++
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 174 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSA-GMSGL--FDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQ 174 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTT-TCTTT--CSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHC-CcHhh--cCEEEEecccCCCCcCHHHHHHHHHHhCCCccc
Confidence 578999999999999999999999999998888888886 99988 999999999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
|++|||+.+|+.+|+.+|+.+++++++....+.+. ..+++..-++.+|.++|++
T Consensus 175 ~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~----~~~~~v~~~~~el~~~l~~ 228 (233)
T 3umb_A 175 ILFVSSNGWDACGATWHGFTTFWINRLGHPPEALD----VAPAAAGHDMRDLLQFVQA 228 (233)
T ss_dssp EEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSS----CCCSEEESSHHHHHHHHHC
T ss_pred EEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhcc----CCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999999998776655442 2234444467788888775
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-27 Score=196.10 Aligned_cols=131 Identities=27% Similarity=0.374 Sum_probs=112.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.|++++++||+........++.+ |+..+ |+.++++++++..||+|++|..+++++|++|++
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 180 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKAS-KLDRV--LDSCLSADDLKIYKPDPRIYQFACDRLGVNPNE 180 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhc-CcHHH--cCEEEEccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 579999999999999999999999999998888889886 99988 999999999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc-ccc-ceecccccccChhHHHHHHHHhh
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDA-IAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l-~~~-~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
|++|||+.+|+++|+.+|+.++++.++.. .+.+ ..+ ++++ -++.+|.++|++++
T Consensus 181 ~~~iGD~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~~~~~~~-----~~~~el~~~l~~~~ 236 (240)
T 2no4_A 181 VCFVSSNAWDLGGAGKFGFNTVRINRQGN-PPEYEFAPLKHQV-----NSLSELWPLLAKNV 236 (240)
T ss_dssp EEEEESCHHHHHHHHHHTCEEEEECTTCC-CCCCTTSCCSEEE-----SSGGGHHHHHCC--
T ss_pred EEEEeCCHHHHHHHHHCCCEEEEECCCCC-CCcccCCCCceee-----CCHHHHHHHHHHhh
Confidence 99999999999999999999999988765 2222 223 4444 45677778877654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=200.01 Aligned_cols=209 Identities=21% Similarity=0.234 Sum_probs=148.1
Q ss_pred CCCCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-------------
Q 020871 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM------------- 129 (320)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 129 (320)
..|++|+|+||+||||+|+...+..++.+++.++|..... ..+...+ .+......
T Consensus 18 ~~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 85 (254)
T 3umc_A 18 YFQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPC---------VELTDRW---RQQYKPAMDRVRNGQAPWQHL 85 (254)
T ss_dssp CSSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCH---------HHHHHHH---HHHTHHHHHHHHTTSSCCCCH
T ss_pred cccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCH---------HHHHHHH---HHHHHHHHHHHhcccCCcccH
Confidence 4567999999999999999999999999999999876433 1111111 11111111
Q ss_pred --------HHHHHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEE
Q 020871 130 --------RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVC 201 (320)
Q Consensus 130 --------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~ 201 (320)
..++..+++.. .. ...+.+... .....++||+.++|+.|++. ++++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~---------~~------------~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~ 141 (254)
T 3umc_A 86 DQLHRQSLEALAGEFGLAL---------DE------------ALLQRITGF--WHRLRPWPDTLAGMHALKAD-YWLAAL 141 (254)
T ss_dssp HHHHHHHHHHHHHHTTCCC---------CH------------HHHHHHHGG--GGSCEECTTHHHHHHHHTTT-SEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCC---------CH------------HHHHHHHHH--HhcCCCCccHHHHHHHHHhc-CeEEEE
Confidence 11222222110 00 000111111 12357899999999999986 999999
Q ss_pred eCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEE
Q 020871 202 SAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 202 Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
||+........++.+ |+. |+.++++++++.+||++++|..+++++|++|++|++|||+.+|+++|+.+|+.++++
T Consensus 142 s~~~~~~~~~~l~~~-g~~----f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 216 (254)
T 3umc_A 142 SNGNTALMLDVARHA-GLP----WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFI 216 (254)
T ss_dssp CSSCHHHHHHHHHHH-TCC----CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred eCCCHHHHHHHHHHc-CCC----cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEE
Confidence 999998888888886 774 699999999999999999999999999999999999999999999999999999999
Q ss_pred e----CCCCchhhccccceecccccccChhHHHHHHH
Q 020871 282 Y----TSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 282 ~----~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
+ ++....+.+. ....+++..-++.+|.++|.
T Consensus 217 ~~~~~~g~~~~~~l~--~~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 217 ARPLEYGPGQSQDLA--AEQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp CCTTTTCTTCCSSSS--CSSCCSEEESSHHHHHHHHH
T ss_pred ecCCccCCCCCcccc--cCCCCcEEECCHHHHHHHhc
Confidence 8 4443333330 01224444445677777765
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=196.47 Aligned_cols=215 Identities=17% Similarity=0.197 Sum_probs=147.8
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcC----Ch--------hhHHHHH
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG----GK--------PKMRWYF 133 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--------~~~~~~~ 133 (320)
|+|+|+||+||||+++...+..++..+++.++...... .......+..+...+.. .. ......+
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKL----GPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHAL 76 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTT----CSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcc----hhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHH
Confidence 48999999999999999888777766665543221110 00112222222222110 00 0122233
Q ss_pred HhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHH
Q 020871 134 KEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL 213 (320)
Q Consensus 134 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l 213 (320)
...|++ .....++. ....+.+.... ....++||+.++|+.|++. ++++++||+... +
T Consensus 77 ~~~~~~-----------~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l 133 (230)
T 3vay_A 77 EDAGYD-----------SDEAQQLA----DESFEVFLHGR--HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----V 133 (230)
T ss_dssp HTTTCC-----------HHHHHHHH----HHHHHHHHHHH--TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----G
T ss_pred HHhCCC-----------hhhhHHHH----HHHHHHHHHhh--ccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----h
Confidence 344433 22222222 22233333332 4568999999999999998 999999998875 4
Q ss_pred HHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc
Q 020871 214 ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK 292 (320)
Q Consensus 214 ~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~ 292 (320)
+.+ |+..+ |+.++++++++.+||+|++|..+++++|++|++|++|||+. +|+++|+++|+.+++++++....+...
T Consensus 134 ~~~-~l~~~--f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~ 210 (230)
T 3vay_A 134 RRL-GLADY--FAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADR 210 (230)
T ss_dssp GGS-TTGGG--CSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSS
T ss_pred hhc-CcHHH--eeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccC
Confidence 554 89888 99999999999999999999999999999999999999998 999999999999999998876543322
Q ss_pred ccceecccccccChhHHHHHHHH
Q 020871 293 DAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 293 ~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
. +++..-++.+|.++|++
T Consensus 211 ~-----~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 211 L-----PDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp C-----CSEEESSGGGHHHHHHT
T ss_pred C-----CCeeECCHHHHHHHHHh
Confidence 3 44444567777787764
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=203.98 Aligned_cols=209 Identities=16% Similarity=0.218 Sum_probs=140.2
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCCh---------hhHHHHHHh
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK---------PKMRWYFKE 135 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 135 (320)
|++|+|+||+||||+|+...+..++.+++.++|++... .++...+...+|... ..+...+..
T Consensus 1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~ 71 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDL---------RKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYI 71 (220)
T ss_dssp CCCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCH---------HHHHHHHHHHGGGCCC-----CCCCCHHHHHHH
T ss_pred CCceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCH---------HHHHHHHHHHhhhccCCCccccccccHHHHHHH
Confidence 35899999999999999988888999999998876432 223333333333221 113444444
Q ss_pred cCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHH
Q 020871 136 HGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (320)
Q Consensus 136 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~ 215 (320)
+|... . .+..+.+ .+.+ .......++||+.++|+.|+++|++++++||+... +...++.
T Consensus 72 ~~~~~----------~---~~~~~~~----~~~~---~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~ 130 (220)
T 2zg6_A 72 LGIYP----------S---ERLVKEL----KEAD---IRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEK 130 (220)
T ss_dssp HTCCC----------C---HHHHHHH----HHTT---TTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHH
T ss_pred cCCCC----------c---HHHHHHH----HHHh---hcccCceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHh
Confidence 44321 0 1111111 1111 11123578999999999999999999999999774 7788888
Q ss_pred hhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh-hHHHHHHcCCeEEEEeCCCCchhhcccc
Q 020871 216 LIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKDA 294 (320)
Q Consensus 216 ~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~-Dv~~a~~aG~~~v~v~~~~~~~~~l~~~ 294 (320)
+ |+..+ |+.++++++++..||+|++|..+++++|++| +||||+.+ |+.+|+++|+.++++.++... ..+
T Consensus 131 ~-gl~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~-~~~--- 200 (220)
T 2zg6_A 131 F-DLKKY--FDALALSYEIKAVKPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFY-PDV--- 200 (220)
T ss_dssp H-TCGGG--CSEEC-----------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCC-TTC---
T ss_pred c-CcHhH--eeEEEeccccCCCCCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCC-CCc---
Confidence 6 99998 9999999999999999999999999999988 99999998 999999999999999765322 111
Q ss_pred ceecccccccChhHHHHHHHHhhh
Q 020871 295 IAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
++..-++.+|.++|++++.
T Consensus 201 -----~~~i~~l~el~~~l~~~~~ 219 (220)
T 2zg6_A 201 -----RDRVKNLREALQKIEEMNK 219 (220)
T ss_dssp -----CSCBSSHHHHHHHHHHHC-
T ss_pred -----ceEECCHHHHHHHHHHhcc
Confidence 2233467788888877653
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-27 Score=191.09 Aligned_cols=128 Identities=20% Similarity=0.304 Sum_probs=110.0
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc--ceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--DCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f--d~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
...++||+.++|+.|++.|++++++||+........++.+ |+..+ | +.+++++. +.+||++++|..+++++|++
T Consensus 68 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~ 143 (205)
T 3m9l_A 68 GSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAI-GLADC--FAEADVLGRDE-APPKPHPGGLLKLAEAWDVS 143 (205)
T ss_dssp EEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG--SCGGGEECTTT-SCCTTSSHHHHHHHHHTTCC
T ss_pred cCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHc-Cchhh--cCcceEEeCCC-CCCCCCHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999899899887 99988 7 77776665 88999999999999999999
Q ss_pred CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 255 EKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
|++|++|||+.+|+++|+.+|+.+|++.++..... .. +++...++.||..++++
T Consensus 144 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~--~~-----ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 144 PSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWP--EL-----TDWHARDCAQLRDLLSA 197 (205)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCG--GG-----CSEECSSHHHHHHHHHH
T ss_pred HHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCccc--cc-----CCEEeCCHHHHHHHHHh
Confidence 99999999999999999999999999988764322 22 44444567788888775
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.9e-27 Score=201.73 Aligned_cols=207 Identities=23% Similarity=0.273 Sum_probs=153.9
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
|++|+|+||+||||+|+...+..++.+++.++|. ... .+.+....|.........+.....
T Consensus 33 m~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~------------~~~~~~~~G~~~~~~~~~~~~~~~------ 93 (275)
T 2qlt_A 33 LKINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDA------------EHVIHISHGWRTYDAIAKFAPDFA------ 93 (275)
T ss_dssp EEESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCH------------HHHHHHCTTCCHHHHHHHHCGGGC------
T ss_pred ccCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCH------------HHHHHHhcCCCHHHHHHHHhccCC------
Confidence 3589999999999999999999999999988873 111 112233345544333222211100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHC-CCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
. ......+ .+.+.+.+ .....++||+.++|+.|++. |++++++||+........++.+ ++..
T Consensus 94 ------~---~~~~~~~----~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~-~l~~-- 156 (275)
T 2qlt_A 94 ------D---EEYVNKL----EGEIPEKY-GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDIL-KIKR-- 156 (275)
T ss_dssp ------C---HHHHHHH----HHTHHHHH-CTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHH-TCCC--
T ss_pred ------c---HHHHHHH----HHHHHHHH-hcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHc-CCCc--
Confidence 0 1112222 22222222 23457899999999999999 9999999999998888888886 8763
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCC-------CCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc-ccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGI-------SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK-DAI 295 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~-------~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~-~~~ 295 (320)
|+.+++++++..+||+|++|..+++++|+ +|++|++|||+.+|+++|+.+|+.+++|.++....+... .++
T Consensus 157 -f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad 235 (275)
T 2qlt_A 157 -PEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCD 235 (275)
T ss_dssp -CSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCS
T ss_pred -cCEEEEcccCCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCC
Confidence 68899999999999999999999999999 999999999999999999999999999998766443333 478
Q ss_pred eecccccccChhH
Q 020871 296 AIYPDLSNVRLKD 308 (320)
Q Consensus 296 ~~~~~~~~~~~~~ 308 (320)
++++++.++.+..
T Consensus 236 ~v~~~~~el~~~~ 248 (275)
T 2qlt_A 236 IIVKNHESIRVGE 248 (275)
T ss_dssp EEESSGGGEEECC
T ss_pred EEECChHHcChhh
Confidence 8888888876543
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-27 Score=195.85 Aligned_cols=131 Identities=21% Similarity=0.265 Sum_probs=110.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.|++++++||+........++.+ |+..+ |+.++++++++.+||+|++|..+++++|++|++
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 170 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-GLRDG--FDHLLSVDPVQVYKPDNRVYELAEQALGLDRSA 170 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhc-ChHhh--hheEEEecccCCCCCCHHHHHHHHHHcCCCccc
Confidence 578999999999999999999999999998888888886 99988 999999999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc-cccceecccccccChhHHHHHHHHh
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
|++|||+.+|+.+|+.+|+.+++++++....+.+ ..+++++ .++.+|.++|++.
T Consensus 171 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~el~~~l~~~ 225 (232)
T 1zrn_A 171 ILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV-----TSLRAVVELFETA 225 (232)
T ss_dssp EEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE-----SSHHHHHTTC---
T ss_pred EEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE-----CCHHHHHHHHHhh
Confidence 9999999999999999999999998875543332 2344444 3466666666544
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=192.29 Aligned_cols=210 Identities=22% Similarity=0.377 Sum_probs=153.6
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 144 (320)
++|+|+||+||||+|+...+...+.++++++|..... .+.+....|...... ..++..++...
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~---- 66 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISV------------EEMGERFAGMTWKNILLQVESEASIPL---- 66 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH------------HHHHHHHTTCCHHHHHHHHHHHHCCCC----
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCH------------HHHHHHHhCCCHHHHHHHHHHHcCCCC----
Confidence 5899999999999999999999999999998875431 123344455554443 33334444321
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
... ....+.+.+.+.+.. ...++||+.++|+.|+. +++++||+........++.+ ++..+
T Consensus 67 -----~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~-~l~~~-- 126 (229)
T 2fdr_A 67 -----SAS----LLDKSEKLLDMRLER-----DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV-GLKPY-- 126 (229)
T ss_dssp -----CTH----HHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred -----CHH----HHHHHHHHHHHHhhc-----CCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhC-ChHHh--
Confidence 111 112222222222222 24789999999988874 89999999998888888886 99888
Q ss_pred c-ceEEeCCCCCCC--CCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc----hhhcc--ccc
Q 020871 225 L-DCFLAGDDVKQK--KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA----EQDFK--DAI 295 (320)
Q Consensus 225 f-d~v~~~~~~~~~--KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~----~~~l~--~~~ 295 (320)
| +.++++++++.+ ||++++|..+++++|++|++|++|||+.+|+++|+.+|+.+++++++... .+.+. .++
T Consensus 127 ~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad 206 (229)
T 2fdr_A 127 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAE 206 (229)
T ss_dssp TTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCS
T ss_pred ccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCc
Confidence 8 889998888889 99999999999999999999999999999999999999999999887652 12232 255
Q ss_pred eecccccccChhHHHHHHHHh
Q 020871 296 AIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 296 ~~~~~~~~~~~~~l~~~l~~~ 316 (320)
+++. ++.+|.++|+++
T Consensus 207 ~v~~-----~~~el~~~l~~~ 222 (229)
T 2fdr_A 207 TVIS-----RMQDLPAVIAAM 222 (229)
T ss_dssp EEES-----CGGGHHHHHHHH
T ss_pred eeec-----CHHHHHHHHHHh
Confidence 5554 456677777654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=195.06 Aligned_cols=211 Identities=19% Similarity=0.278 Sum_probs=148.8
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhh----------------
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK---------------- 128 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 128 (320)
+++|+|+||+||||+|+...+..++.+++.++|.+... ..+ +....+.....
T Consensus 13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDA---------VAF---ADRWRARYQPSMDAILSGAREFVTLDI 80 (254)
T ss_dssp SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCH---------HHH---HHHHHTTHHHHHHHHHTTSSCCCCHHH
T ss_pred CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCH---------HHH---HHHHHHhHHHHHHHHHhcCCCCCCHHH
Confidence 46999999999999999999999999999999876533 111 11111211111
Q ss_pred -----HHHHHHhcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeC
Q 020871 129 -----MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSA 203 (320)
Q Consensus 129 -----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn 203 (320)
+..++..++++.. .... ...+.+... .....++||+.++|+.|++. ++++++||
T Consensus 81 ~~~~~~~~~~~~~~~~~~------~~~~------------~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~t~ 139 (254)
T 3umg_A 81 LHRENLDFVLRESGIDPT------NHDS------------GELDELARA--WHVLTPWPDSVPGLTAIKAE-YIIGPLSN 139 (254)
T ss_dssp HHHHHHHHHHHHTTCCGG------GSCH------------HHHHHHHGG--GGSCCBCTTHHHHHHHHHHH-SEEEECSS
T ss_pred HHHHHHHHHHHHhCCCcC------cCCH------------HHHHHHHHH--HhhCcCCcCHHHHHHHHHhC-CeEEEEeC
Confidence 1122222222100 0000 000111111 13457899999999999997 99999999
Q ss_pred CchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEe-
Q 020871 204 ATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY- 282 (320)
Q Consensus 204 ~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~- 282 (320)
+........++.+ |+. |+.++++++++..||++.+|..+++++|++|++|++|||+.+|+++|+.+|+.+++++
T Consensus 140 ~~~~~~~~~l~~~-~~~----f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 214 (254)
T 3umg_A 140 GNTSLLLDMAKNA-GIP----WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILR 214 (254)
T ss_dssp SCHHHHHHHHHHH-TCC----CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred CCHHHHHHHHHhC-CCC----eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEec
Confidence 9999888888887 774 6888888899999999999999999999999999999999999999999999999998
Q ss_pred ---CCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 283 ---TSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 283 ---~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
++....+.+. ....+++..-++.+|.++|..
T Consensus 215 ~~~~g~~~~~~~~--~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 215 PVEHGPHQTDDLA--PTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp TTTTCTTCCSCSS--CSSCCSEEESSHHHHHHHHHH
T ss_pred CCcCCCCcccccc--ccCCCceEECCHHHHHHHhcC
Confidence 4433333320 122344555567778887764
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-25 Score=190.65 Aligned_cols=217 Identities=16% Similarity=0.118 Sum_probs=147.0
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHH---hcccCCCCccccCCCCChhHH-HHHH--HHhcCChhhHHHHHH----
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFS---HFNVRCDPSSQQSLNWDPEFY-DVLQ--NQIGGGKPKMRWYFK---- 134 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~---- 134 (320)
|++|+|+||+||||+|+...+..++.++++ ++|+.... .....+. ..+. ...|.+...+...+.
T Consensus 11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 84 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDS------RMQQHLLAVERRNLKIFGYGAKGMTLSMIETAI 84 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----------CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred CceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhH------HHHHHHHHHHhhhhhhccCcchHHHHHHHHHHH
Confidence 468999999999999999999999998874 55654310 0001111 1111 245666554443322
Q ss_pred -hcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHH
Q 020871 135 -EHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL 213 (320)
Q Consensus 135 -~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l 213 (320)
..+.. .. ...... +.+.|.+.+ .....++||+.++|+.|+ .|++++++||+........+
T Consensus 85 ~~~~~~---------~~----~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l 145 (251)
T 2pke_A 85 ELTEAR---------IE----ARDIQR----IVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKI 145 (251)
T ss_dssp HHTTTC---------CC----HHHHHH----HHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHH
T ss_pred HhcCCC---------CC----hHHHHH----HHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHH
Confidence 12211 11 111122 222333332 244678999999999999 99999999999988888888
Q ss_pred HHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchh---
Q 020871 214 ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQ--- 289 (320)
Q Consensus 214 ~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~--- 289 (320)
+.+ ++..+ |+.++++ .||+|++|..+++++|++|++|++|||+. +|+.+|+.+|+.++++.++.....
T Consensus 146 ~~~-~l~~~--f~~i~~~-----~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~ 217 (251)
T 2pke_A 146 EQS-GLSDL--FPRIEVV-----SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQD 217 (251)
T ss_dssp HHH-SGGGT--CCCEEEE-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC--------
T ss_pred HHc-CcHHh--Cceeeee-----CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccc
Confidence 886 99888 8888763 68999999999999999999999999999 999999999999999977653211
Q ss_pred h-ccccceecccc-cccChhHHHHHHHHhh
Q 020871 290 D-FKDAIAIYPDL-SNVRLKDLELLLQNVV 317 (320)
Q Consensus 290 ~-l~~~~~~~~~~-~~~~~~~l~~~l~~~~ 317 (320)
. +. ...+++ ..-++.+|.++|+++.
T Consensus 218 ~~~~---~~~~~~~~i~~~~el~~~l~~~~ 244 (251)
T 2pke_A 218 HGVA---ADEPRLREVPDPSGWPAAVRALD 244 (251)
T ss_dssp --------CCTTEEECSSGGGHHHHHHHHH
T ss_pred cccc---cCCCCeeeeCCHHHHHHHHHHhC
Confidence 1 11 112343 3445677777777654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=186.93 Aligned_cols=180 Identities=15% Similarity=0.220 Sum_probs=135.1
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHh-cCChhhHHHHHHhcCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI-GGGKPKMRWYFKEHGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 143 (320)
|++|+|+||+||||+|+...+..++.++++++|..... +.+...+ +... .......+-.
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~~~~~---~~~~~~~~~~---- 63 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDH-------------DSVYQALKVSTP---FAIETFAPNL---- 63 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHHHHCHH---HHHHHHCTTC----
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHHccccH---HHHHHHhhhH----
Confidence 35899999999999999999999999999998875432 1222222 2221 2222222100
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
.. .. ..+.+.+...+ ... .++||+.++|+.|++.|++++++||... .....++.+ ++..+
T Consensus 64 -------~~----~~----~~~~~~~~~~~-~~~-~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~-~~~~~- 123 (190)
T 2fi1_A 64 -------EN----FL----EKYKENEAREL-EHP-ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKT-SIAAY- 123 (190)
T ss_dssp -------TT----HH----HHHHHHHHHHT-TSC-CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHT-TCGGG-
T ss_pred -------HH----HH----HHHHHHHHHhc-CcC-ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHc-CCHhh-
Confidence 00 11 11222233332 122 3899999999999999999999999864 577778876 99888
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
|+.++++++++.+||+++.|..+++++|++ +|++|||+.+|+++|+.+|+.+++++++...
T Consensus 124 -f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~ 184 (190)
T 2fi1_A 124 -FTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNL 184 (190)
T ss_dssp -EEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHH
T ss_pred -eeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCCh
Confidence 899999999999999999999999999998 9999999999999999999999999876443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=197.27 Aligned_cols=212 Identities=18% Similarity=0.273 Sum_probs=141.5
Q ss_pred CCCccEEEEecCCccccchHHHHHHHHHHHHhc-----ccCCCCccccCCCCChhHHHHHHHH-hcCChhhHHHHHHhcC
Q 020871 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHF-----NVRCDPSSQQSLNWDPEFYDVLQNQ-IGGGKPKMRWYFKEHG 137 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 137 (320)
..++|+|+||+||||+|+...+..++..++.++ ++.. .....+... .......+...+..++
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSP------------EDAHVLNNSYYKEYGLAIRGLVMFHK 121 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCH------------HHHHHHHHHHHHHTHHHHHHHHHTTS
T ss_pred CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCH------------HHHHHHHHHHHHHHhhhHHHHHHHcC
Confidence 347899999999999999887777777777654 3321 111111110 0000111223333333
Q ss_pred CCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCC--cEEEEeCCchhhHHHHHHH
Q 020871 138 WPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGK--KVAVCSAATKSSVILCLEN 215 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~--~i~i~Tn~~~~~~~~~l~~ 215 (320)
+. . . .+......... . .....++||+.++|+.|++.|+ +++++||+........++.
T Consensus 122 ~~-----------~---~----~~~~~~~~~~~-~--~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~ 180 (282)
T 3nuq_A 122 VN-----------A---L----EYNRLVDDSLP-L--QDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRL 180 (282)
T ss_dssp SC-----------H---H----HHHHHHTTTSC-G--GGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHH
T ss_pred CC-----------H---H----HHHHHHhhhhh-h--hhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHh
Confidence 32 1 1 11111111000 0 1235789999999999999999 9999999999989989988
Q ss_pred hhCCccccCcceEEeCCCC----CCCCCCHHHHHHHHHHcCCCC-CCEEEEecCHhhHHHHHHcCCe-EEEEeCCCCchh
Q 020871 216 LIGMERFEGLDCFLAGDDV----KQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMA-CVITYTSSTAEQ 289 (320)
Q Consensus 216 ~~~l~~~~~fd~v~~~~~~----~~~KP~~~~~~~~~~~l~~~~-~~~v~VGD~~~Dv~~a~~aG~~-~v~v~~~~~~~~ 289 (320)
+ |+..+ |+.++++++. ..+||++++|..+++++|++| ++|++|||+.+|+.+|+++|+. ++++..+.....
T Consensus 181 ~-gl~~~--fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~ 257 (282)
T 3nuq_A 181 L-GIADL--FDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEI 257 (282)
T ss_dssp H-TCTTS--CSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC---
T ss_pred C-Ccccc--cceEEEeccCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccc
Confidence 7 99988 9999987664 567999999999999999999 9999999999999999999995 555555443221
Q ss_pred --hccccceecccccccChhHHHHHHHHh
Q 020871 290 --DFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 290 --~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
....+++++.+ +.+|.++|.++
T Consensus 258 ~~~~~~ad~vi~s-----l~el~~~l~~l 281 (282)
T 3nuq_A 258 LGQTPEGAIVISD-----ILELPHVVSDL 281 (282)
T ss_dssp -CCCCTTCEEESS-----GGGGGGTSGGG
T ss_pred cccCCCCCEEeCC-----HHHHHHHhhhh
Confidence 11244555555 55555665554
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.8e-26 Score=188.77 Aligned_cols=183 Identities=17% Similarity=0.180 Sum_probs=130.8
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHH-------HHHhcCChhhHHH-----HHH
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVL-------QNQIGGGKPKMRW-----YFK 134 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----~~~ 134 (320)
+|+|+||+||||+|+...+..++..+++.+...... ......+ ....+.+...... .+.
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTS---------KEISAALFQTEMNNLQILGYGAKAFTISMVETALQ 78 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCH---------HHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHH
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCH---------HHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHH
Confidence 899999999999999988888877776655432211 1111111 1233443332211 111
Q ss_pred hcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCC-CcEEEEeCCchhhHHHHH
Q 020871 135 EHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCL 213 (320)
Q Consensus 135 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g-~~i~i~Tn~~~~~~~~~l 213 (320)
..+. ..+.+.. ..+. +.+.+.+ .....++||+.++|+.|++.| ++++++||+........+
T Consensus 79 ~~~~---------~~~~~~~----~~~~----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l 140 (234)
T 3ddh_A 79 ISNG---------KIAADII----RQIV----DLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKL 140 (234)
T ss_dssp HTTT---------CCCHHHH----HHHH----HHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHH
T ss_pred HhcC---------CCCHHHH----HHHH----HHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHH
Confidence 1111 1112221 2222 2222222 244679999999999999999 999999999998888888
Q ss_pred HHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCC
Q 020871 214 ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTS 284 (320)
Q Consensus 214 ~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~ 284 (320)
+.+ ++..+ |+.++++ +||+|++|..+++++|++|++|++|||+. +|+++|+.+|+.++++..+
T Consensus 141 ~~~-~~~~~--f~~~~~~-----~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~ 204 (234)
T 3ddh_A 141 ERS-GLSPY--FDHIEVM-----SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFE 204 (234)
T ss_dssp HHH-TCGGG--CSEEEEE-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCC
T ss_pred HHh-CcHhh--hheeeec-----CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCC
Confidence 887 99888 8988764 68999999999999999999999999997 9999999999999999554
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-26 Score=191.16 Aligned_cols=120 Identities=15% Similarity=0.285 Sum_probs=93.0
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--h--------CCccccCcceEEeCCCCCCCCCCHHHHHH
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--I--------GMERFEGLDCFLAGDDVKQKKPDPSIYVT 246 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~--------~l~~~~~fd~v~~~~~~~~~KP~~~~~~~ 246 (320)
...++||+.++|+. |++++|+||++...+...++.. . ++..+ |+.++.+ .+...||+|++|..
T Consensus 123 ~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~--~~~~f~~-~~~g~KP~p~~~~~ 195 (253)
T 2g80_A 123 KAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY--IDGYFDI-NTSGKKTETQSYAN 195 (253)
T ss_dssp CBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG--CCEEECH-HHHCCTTCHHHHHH
T ss_pred cCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh--cceEEee-eccCCCCCHHHHHH
Confidence 35789999999988 8999999999999888888764 1 46666 6666544 23126999999999
Q ss_pred HHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 247 ~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
+++++|++|++|+||||+.+|+++|+++|+.++++.++.........+..++.++.+
T Consensus 196 a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 252 (253)
T 2g80_A 196 ILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFET 252 (253)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTT
T ss_pred HHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhh
Confidence 999999999999999999999999999999999997744321111124455555544
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.7e-27 Score=191.28 Aligned_cols=128 Identities=20% Similarity=0.303 Sum_probs=108.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.+ |+.|+++ ++++++||+........++.+ |+..+ |+.++++++++..||+|++|..+++++| |++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~ 145 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERN-GLLRY--FKGIFSAESVKEYKPSPKVYKYFLDSIG--AKE 145 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSC
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHC-CcHHh--CcEEEehhhcCCCCCCHHHHHHHHHhcC--CCc
Confidence 579999999 9999999 999999999988888888886 99988 9999999999999999999999999999 999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHh
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
|++|||+.+|+++|+++|+.+++++++....+.+. ..+++..-++.+|.+++.++
T Consensus 146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 146 AFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIG----GKPDVIVNDFKELYEWILRY 200 (201)
T ss_dssp CEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTS----CCCSEEESSHHHHHHHHHHH
T ss_pred EEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccC----CCCCEEECCHHHHHHHHHhc
Confidence 99999999999999999999999988655433222 12333334567777777653
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=189.70 Aligned_cols=110 Identities=20% Similarity=0.366 Sum_probs=101.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.| +++++||+........++.+ |+..+ |+.++++++++..||+|++|..+++++|++|++
T Consensus 85 ~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~-~~~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 160 (200)
T 3cnh_A 85 SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTF-GLGEF--LLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEE 160 (200)
T ss_dssp CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHH-TGGGT--CSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhC-CHHHh--cceEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 459999999999999999 99999999999888888887 99988 999999999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
|++|||+.+|+++|+.+|+.+++++++....+.+
T Consensus 161 ~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l 194 (200)
T 3cnh_A 161 AVMVDDRLQNVQAARAVGMHAVQCVDAAQLREEL 194 (200)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEECSCHHHHHHHH
T ss_pred eEEeCCCHHHHHHHHHCCCEEEEECCchhhHHHH
Confidence 9999999999999999999999998875544443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=190.78 Aligned_cols=101 Identities=20% Similarity=0.304 Sum_probs=96.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|+ |++++++||+........++.+ |+..+ |+.++++++++.+||+|++|..+++++|++|++
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~-gl~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 166 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA-GLTDS--FDAVISVDAKRVFKPHPDSYALVEEVLGVTPAE 166 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGG
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHC-Cchhh--ccEEEEccccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 578999999999999 8999999999999888888886 99988 999999999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeC
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~ 283 (320)
|++|||+.+|+++|+++|+.++++++
T Consensus 167 ~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 167 VLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp EEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred EEEEeCChhhHHHHHHCCCEEEEECC
Confidence 99999999999999999999999987
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.5e-26 Score=188.27 Aligned_cols=109 Identities=17% Similarity=0.251 Sum_probs=98.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHH------HHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL------ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG 252 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l------~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~ 252 (320)
.++||+.++|+.|++. ++++++||+........+ +.. |+..+ |+.++++++++..||+|++|..+++++|
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~-~l~~~--fd~i~~~~~~~~~KP~~~~~~~~~~~~g 187 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTF-KVEDY--FEKTYLSYEMKMAKPEPEIFKAVTEDAG 187 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTB-CHHHH--CSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccC-CHHHh--CCEEEeecccCCCCCCHHHHHHHHHHcC
Confidence 5789999999999999 999999999998877555 444 88888 9999999999999999999999999999
Q ss_pred CCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 253 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 253 ~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
++|++|++|||+.+|+++|+++|+.+++++++....+.|
T Consensus 188 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~L 226 (229)
T 4dcc_A 188 IDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHLF 226 (229)
T ss_dssp CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGGG
T ss_pred CCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHHh
Confidence 999999999999999999999999999999886655444
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-25 Score=181.08 Aligned_cols=135 Identities=21% Similarity=0.325 Sum_probs=111.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch---hhHHHHHHHhhCCccccCcceEEeCCCC----CCCCCCHHHHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---SSVILCLENLIGMERFEGLDCFLAGDDV----KQKKPDPSIYVTAAKR 250 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---~~~~~~l~~~~~l~~~~~fd~v~~~~~~----~~~KP~~~~~~~~~~~ 250 (320)
..++||+.++|+.|++.|++++++||+.. ..+...++.+ |+..+ |+.++++++. +..||+|++|..++++
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~-gl~~~--fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~ 109 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF-GIIDY--FDFIYASNSELQPGKMEKPDKTIFDFTLNA 109 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT-TCGGG--EEEEEECCTTSSTTCCCTTSHHHHHHHHHH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc-Cchhh--eEEEEEccccccccCCCCcCHHHHHHHHHH
Confidence 57999999999999999999999999987 7788888887 99998 9999999886 7889999999999999
Q ss_pred cCCCCCCEEEEecC-HhhHHHHHHcCCeEEEEeCCCCc--hhhcc--ccceecccccccChhHHHHHHHH
Q 020871 251 LGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTA--EQDFK--DAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 251 l~~~~~~~v~VGD~-~~Dv~~a~~aG~~~v~v~~~~~~--~~~l~--~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
+|++|++|+||||+ .+|+.+|+++|+.++++.++... .+.+. .++.+++++.--.+.++.+++++
T Consensus 110 ~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~ 179 (189)
T 3ib6_A 110 LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKK 179 (189)
T ss_dssp HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHH
T ss_pred cCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHHH
Confidence 99999999999999 69999999999999999887653 23332 45666663222233444444443
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-26 Score=189.06 Aligned_cols=107 Identities=15% Similarity=0.237 Sum_probs=97.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh-----hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL-----IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLG 252 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~-----~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~ 252 (320)
..++||+.++|+.|++ |++++++||+........++.+ .|+..+ |+.++++++++..||+|++|..+++++|
T Consensus 88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 164 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF--FDKVYASCQMGKYKPNEDIFLEMIADSG 164 (211)
T ss_dssp EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG--SSEEEEHHHHTCCTTSHHHHHHHHHHHC
T ss_pred cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH--cCeEEeecccCCCCCCHHHHHHHHHHhC
Confidence 4689999999999999 9999999999988887777761 288888 9999999999999999999999999999
Q ss_pred CCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 253 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 253 ~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
++|++|++|||+.+|+.+|+.+|+.+++++++...
T Consensus 165 ~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~ 199 (211)
T 2i6x_A 165 MKPEETLFIDDGPANVATAERLGFHTYCPDNGENW 199 (211)
T ss_dssp CCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCC
T ss_pred CChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHH
Confidence 99999999999999999999999999999876543
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-25 Score=179.09 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=90.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC-C
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE-K 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~-~ 256 (320)
..++||+.++|+.|+++|++++|+||....... +.. + .+ |+.+++++++..+||+|++|..+++++|+.+ +
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~---~~~-~--~~--~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 106 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALST---PLA-A--PV--NDWMIAAPRPTAGWPQPDACWMALMALNVSQLE 106 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHH---HHH-T--TT--TTTCEECCCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHH---Hhc-C--cc--CCEEEECCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 478999999999999999999999998876552 222 4 45 7999999999999999999999999999976 8
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
+|+||||+.+|+++|+++|+.+|+|.++..
T Consensus 107 ~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~ 136 (196)
T 2oda_A 107 GCVLISGDPRLLQSGLNAGLWTIGLASCGP 136 (196)
T ss_dssp TCEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred cEEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence 999999999999999999999999998764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=178.71 Aligned_cols=131 Identities=21% Similarity=0.219 Sum_probs=103.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch---------------hhHHHHHHHhhCCccccCcceEE-----eCCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFL-----AGDDVKQK 237 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---------------~~~~~~l~~~~~l~~~~~fd~v~-----~~~~~~~~ 237 (320)
++++||+.++|+.|+++|++++++||+.. ..+...++.+ | .+ |+.++ .+++.+..
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g--~~--~~~~~~~~~~~~~~~~~~ 100 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQM-G--GV--VDAIFMCPHGPDDGCACR 100 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHT-T--CC--CCEEEEECCCTTSCCSSS
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhC-C--Cc--eeEEEEcCCCCCCCCCCC
Confidence 47999999999999999999999999986 4556667765 6 22 45544 25778899
Q ss_pred CCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 238 KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
||+|++|..+++++|++|++|+||||+.+|+++|+++|+.++++.++....+.+.. ....+++..-++.+|.+++.
T Consensus 101 KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~-~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQG-GLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp TTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHC-CCCTTEEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhc-ccCCCcEEecCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998776554421 01123333334666666654
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-26 Score=186.08 Aligned_cols=110 Identities=21% Similarity=0.376 Sum_probs=97.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.|++++++||+........++...|+..+ |+.++++++.+..||+|++|..+++++|++|++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 167 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD 167 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh--eeeEEEecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 578999999999999999999999999877666555551277777 899999999999999999999999999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchh
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~ 289 (320)
|++|||+.+|+.+|+.+|+.+++++++....+
T Consensus 168 ~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~ 199 (206)
T 2b0c_A 168 TVFFDDNADNIEGANQLGITSILVKDKTTIPD 199 (206)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred eEEeCCCHHHHHHHHHcCCeEEEecCCchHHH
Confidence 99999999999999999999999988755433
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-24 Score=178.72 Aligned_cols=116 Identities=17% Similarity=0.135 Sum_probs=99.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEe----------CCCCCCCCCCHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA----------GDDVKQKKPDPSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~----------~~~~~~~KP~~~~~~~~ 247 (320)
..++||+.++|+.|++.|++++++||+....+...++.+ |+..+ |+.++. ++++..+||+|++|..+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-gl~~~--f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~ 150 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLL-HLDAA--FSNTLIVENDALNGLVTGHMMFSHSKGEMLLVL 150 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEEEETTEEEEEEEESCCSTTHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHc-Ccchh--ccceeEEeCCEEEeeeccCCCCCCChHHHHHHH
Confidence 579999999999999999999999999999999999987 99988 888763 34466789999999999
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
++++|++|++|++|||+.+|+.+|+.+|+.+++ +. .......+++++++
T Consensus 151 ~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~---~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 151 QRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NA---KEVLKQHATHCINE 199 (217)
T ss_dssp HHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SC---CHHHHTTCSEEECS
T ss_pred HHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-Cc---cHHHHHhcceeecc
Confidence 999999999999999999999999999999877 32 22333467777654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-24 Score=178.06 Aligned_cols=123 Identities=16% Similarity=0.149 Sum_probs=95.0
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc--ccCcceEE--------eCCCCCC----CCCCH
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER--FEGLDCFL--------AGDDVKQ----KKPDP 241 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~--~~~fd~v~--------~~~~~~~----~KP~~ 241 (320)
....++||+.++|+.|+++|++++++||+....+...++.+ |+.. + |+.++ .+.+... .||+|
T Consensus 83 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp 159 (225)
T 1nnl_A 83 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKL-NIPATNV--FANRLKFYFNGEYAGFDETQPTAESGGKG 159 (225)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCCGGGE--EEECEEECTTSCEEEECTTSGGGSTTHHH
T ss_pred ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHc-CCCcccE--EeeeEEEcCCCcEecCCCCCcccCCCchH
Confidence 34679999999999999999999999999999899999987 8873 5 56543 3434332 46788
Q ss_pred HHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc
Q 020871 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 304 (320)
Q Consensus 242 ~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 304 (320)
+.|..+++++|+ ++|+||||+.+|+.+|+++|+ ++++............+++++.++.++
T Consensus 160 ~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el 219 (225)
T 1nnl_A 160 KVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL 219 (225)
T ss_dssp HHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred HHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHH
Confidence 899999999998 789999999999999999999 777754432222223456666665443
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-24 Score=179.10 Aligned_cols=210 Identities=13% Similarity=0.133 Sum_probs=136.8
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
.++|+|+||+||||+|+...+..++.+++.++|.+.... .....+.+....|... ....+..++...
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~g~~~--~~~~~~~~~~~~---- 75 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSAR-------YWEIFETLRTELGYAD--YLGALQRYRLEQ---- 75 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHH-------HHHHHHHHHHHC-CCC--HHHHHHHHHHHC----
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchH-------HHHHHHHHHHhcCchH--HHHHHHHHHhcc----
Confidence 368899999999999999999999999999988643110 0001223333333321 111111111000
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
.. .. +.+.+.+.+.... ....++||+.++|+.|+++| +++|+||+....+...++.+ |+..+
T Consensus 76 ---~~-~~--------~~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~-gl~~~-- 137 (231)
T 2p11_A 76 ---PR-DT--------RLLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARS-GLWDE-- 137 (231)
T ss_dssp ---TT-CT--------GGGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHT-THHHH--
T ss_pred ---cc-ch--------HHHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHc-CcHHh--
Confidence 00 00 0011122222221 23579999999999999999 99999999999999999987 99888
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh---hHHHHHHcCCeEEEEeCCCC--chhhcc---ccce
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI---GLQAATRAGMACVITYTSST--AEQDFK---DAIA 296 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~---Dv~~a~~aG~~~v~v~~~~~--~~~~l~---~~~~ 296 (320)
|+.++.. +..| +.++..+++ +++|++|+||||+.+ |+.+|+++|+.++++.++.. ..+.+. .++.
T Consensus 138 f~~~~~~---~~~K--~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~ 210 (231)
T 2p11_A 138 VEGRVLI---YIHK--ELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADV 210 (231)
T ss_dssp TTTCEEE---ESSG--GGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSE
T ss_pred cCeeEEe---cCCh--HHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCce
Confidence 7765442 2344 567777776 789999999999999 99999999999999988742 223332 2455
Q ss_pred ecccccccChhHHHHHHHHhh
Q 020871 297 IYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 297 ~~~~~~~~~~~~l~~~l~~~~ 317 (320)
++.+ +.+|.+++++++
T Consensus 211 ~i~~-----~~el~~~l~~~~ 226 (231)
T 2p11_A 211 TVER-----IGDLVEMDAEWL 226 (231)
T ss_dssp EESS-----GGGGGGCGGGGC
T ss_pred eecC-----HHHHHHHHHHHH
Confidence 5554 445555555544
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=196.44 Aligned_cols=109 Identities=17% Similarity=0.268 Sum_probs=94.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCC------chhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHc
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAA------TKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL 251 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~------~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l 251 (320)
..++||+.++|+.|+++|++++|+||+ ........+ .++..+ ||.++++++++..||+|++|..+++++
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~--fd~i~~~~~~~~~KP~p~~~~~~~~~l 173 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM---CELKMH--FDFLIESCQVGMVKPEPQIYKFLLDTL 173 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH---HHHHTT--SSEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh---hhhhhh--eeEEEeccccCCCCCCHHHHHHHHHHc
Confidence 579999999999999999999999998 332222222 366777 999999999999999999999999999
Q ss_pred CCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 252 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 252 ~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
|++|++|+||||+.+|+++|+++|+.+++++++....+.+
T Consensus 174 g~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~~~~~l 213 (555)
T 3i28_A 174 KASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKEL 213 (555)
T ss_dssp TCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHHHHHHHH
T ss_pred CCChhHEEEECCcHHHHHHHHHcCCEEEEECCCccHHHHH
Confidence 9999999999999999999999999999998776544433
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-24 Score=185.15 Aligned_cols=125 Identities=14% Similarity=0.155 Sum_probs=99.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhh--HHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~--~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
..++||+.++|+.|+ .|+++ ++||.+... ....+....++..+ |+.++++++.+.+||+|++|..+++++|++|
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~ 200 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTF--VETATQTKPVYIGKPKAIIMERAIAHLGVEK 200 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHH--HHHHHTCCCEECSTTSHHHHHHHHHHHCSCG
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHH--HHHHhCCCccccCCCCHHHHHHHHHHcCCCH
Confidence 457899999999997 88987 899987642 11111111245566 7888888888899999999999999999999
Q ss_pred CCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc----ccceecccccccCh
Q 020871 256 KDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVRL 306 (320)
Q Consensus 256 ~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~~~ 306 (320)
++|+||||++ +|+.+|+++|+.+++|.++....+.+. .++++++++.++..
T Consensus 201 ~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 201 EQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred HHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 9999999995 999999999999999999877655553 46778777776543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-25 Score=188.10 Aligned_cols=206 Identities=16% Similarity=0.193 Sum_probs=138.9
Q ss_pred CCccEEEEecCCccccchHHHHHH--HHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (320)
|++|+|+||+||||+|+...+..+ +.+.+.+.|++....+ ...|.+...+...+...|+...
T Consensus 1 M~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t---------------~~~g~~~~~~~~~~~~~g~~~~- 64 (250)
T 2c4n_A 1 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLT---------------NYPSQTGQDLANRFATAGVDVP- 64 (250)
T ss_dssp CCCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEE---------------SCCSCCHHHHHHHHHHTTCCCC-
T ss_pred CCccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEE---------------CCCCCCHHHHHHHHHHcCCCCC-
Confidence 358999999999999997665555 5555667777643211 1124444455555555554310
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEE-----------------------
Q 020871 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVA----------------------- 199 (320)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~----------------------- 199 (320)
...... .... ...+.+.+ .....+++|+.++++.|++.|++++
T Consensus 65 --------~~~~~~-~~~~----~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 2c4n_A 65 --------DSVFYT-SAMA----TADFLRRQ-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKA 130 (250)
T ss_dssp --------GGGEEE-HHHH----HHHHHHTS-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHH
T ss_pred --------HHHeEc-HHHH----HHHHHHhc-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHH
Confidence 000000 0000 01111111 2335678999999999999999998
Q ss_pred ----------EEeCCchhhHHHHHHHhhC-CccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecC-Hhh
Q 020871 200 ----------VCSAATKSSVILCLENLIG-MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIG 267 (320)
Q Consensus 200 ----------i~Tn~~~~~~~~~l~~~~~-l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~-~~D 267 (320)
++||.. ......++.. + +..+ |+.+.+.+.+..+||++.+|..+++++|++|++|++|||+ .||
T Consensus 131 ~~~~~~~~~~i~t~~~-~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nD 206 (250)
T 2c4n_A 131 AYFVANGARFIATNPD-THGRGFYPAC-GALCAG--IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTD 206 (250)
T ss_dssp HHHHHTTCEEEESCCC-SBSSTTCBCH-HHHHHH--HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTH
T ss_pred HHHHHCCCEEEEECCC-CCCCCeeecc-hHHHHH--HHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhH
Confidence 888876 3333223322 3 4444 5666667778889999999999999999999999999999 699
Q ss_pred HHHHHHcCCeEEEEeCCCCchhhcc----ccceeccccccc
Q 020871 268 LQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNV 304 (320)
Q Consensus 268 v~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~ 304 (320)
++|++.+|+.+++|.++....+.+. .++++++++.++
T Consensus 207 i~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 207 ILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp HHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred HHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 9999999999999999877655552 567777776654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=180.33 Aligned_cols=100 Identities=18% Similarity=0.190 Sum_probs=90.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEe----------CCCCCCCCCCHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA----------GDDVKQKKPDPSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~----------~~~~~~~KP~~~~~~~~ 247 (320)
+.++||+.++|+.|+++|++++++||+....+...++.+ |+..+ |+.++. +.++..+||+|++|..+
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~l-gl~~~--f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~ 254 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARY-QLDYA--FSNTVEIRDNVLTDNITLPIMNAANKKQTLVDL 254 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHc-CCCeE--EEEEEEeeCCeeeeeEecccCCCCCCHHHHHHH
Confidence 579999999999999999999999999999999999997 99988 777654 33455679999999999
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
++++|++|++|+||||+.+|+.+|+.+|+.+++
T Consensus 255 ~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 255 AARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 999999999999999999999999999998776
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=165.22 Aligned_cols=128 Identities=23% Similarity=0.272 Sum_probs=103.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCc---------------hhhHHHHHHHhhCCccccCcceEEe------------
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLA------------ 230 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~---------------~~~~~~~l~~~~~l~~~~~fd~v~~------------ 230 (320)
..++||+.++|+.|+++|++++++||+. ...+...++.+ |+. |+.++.
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----f~~~~~~~~~~~~~~~~~ 123 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR-DVD----LDGIYYCPHHPQGSVEEF 123 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT-TCC----CSEEEEECCBTTCSSGGG
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHc-CCc----eEEEEECCcCCCCccccc
Confidence 4789999999999999999999999998 36677788876 776 355543
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeE-EEEeCCCCchhhc-cccceecccccccChhH
Q 020871 231 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAIAIYPDLSNVRLKD 308 (320)
Q Consensus 231 ~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~-v~v~~~~~~~~~l-~~~~~~~~~~~~~~~~~ 308 (320)
++++..+||+|++|..+++++|++|++|+||||+.+|+.+|+++|+.+ +++.++....+.. ..+++++. ++.+
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~-----~l~e 198 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN-----SLAD 198 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES-----CGGG
T ss_pred CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC-----CHHH
Confidence 345778999999999999999999999999999999999999999999 9998876543222 12444444 5667
Q ss_pred HHHHHHH
Q 020871 309 LELLLQN 315 (320)
Q Consensus 309 l~~~l~~ 315 (320)
|.+++.+
T Consensus 199 l~~~l~~ 205 (211)
T 2gmw_A 199 LPQAIKK 205 (211)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 7777664
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-23 Score=160.55 Aligned_cols=104 Identities=20% Similarity=0.322 Sum_probs=96.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEE
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL 259 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v 259 (320)
++||+.++|+.|++.|++++++||+........++.+ |+..+ |+.++++++.+..||+|++|..+++++|++|++|+
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 95 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL-ETNGV--VDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCV 95 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH-HHTTS--SSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC-ChHhh--ccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 5678899999999999999999999988888888886 88888 99999999999999999999999999999999999
Q ss_pred EEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 260 VVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 260 ~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
||||+.+|+++|+++|+.+++++++..
T Consensus 96 ~vgD~~~di~~a~~~G~~~i~~~~~~~ 122 (137)
T 2pr7_A 96 LVDDSILNVRGAVEAGLVGVYYQQFDR 122 (137)
T ss_dssp EEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred EEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence 999999999999999999999877543
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.88 E-value=7.1e-24 Score=180.02 Aligned_cols=130 Identities=12% Similarity=0.102 Sum_probs=99.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc---eEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD---CFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd---~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
+++++.++++.|+ .|+++ ++||.+.......+... ++..+ |+ .+++++++..+||+|++|..+++++|++|+
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 197 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLAL-GPGPF--VTALEYATDTKAMVVGKPEKTFFLEALRDADCAPE 197 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEE-CSHHH--HHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGG
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCccc-CCcHH--HHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChH
Confidence 7899999999999 89999 99998765544444443 77776 65 556778888999999999999999999999
Q ss_pred CEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 257 DCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 257 ~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
+|++|||+. +|+.+|+++|+.++++.++.....+... ....|++..-++.+|.+++.+
T Consensus 198 ~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~-~~~~~~~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 198 EAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEK-INPPPYLTCESFPHAVDHILQ 256 (259)
T ss_dssp GEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGG-SSSCCSEEESCHHHHHHHHHH
T ss_pred HEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccc-cCCCCCEEECCHHHHHHHHHH
Confidence 999999999 9999999999999999887432222110 012244444456666666653
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=163.62 Aligned_cols=130 Identities=12% Similarity=0.115 Sum_probs=101.5
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCc-ceEEeCCCCC--C-CCCCHHHHHHHHHHcC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLAGDDVK--Q-KKPDPSIYVTAAKRLG 252 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~f-d~v~~~~~~~--~-~KP~~~~~~~~~~~l~ 252 (320)
...++||+.++|+.|++. ++++++||+........++.+ |+..+ | +.++++++.. . .||+|+.+..++++++
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~-gl~~~--f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~ 142 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQL-GFPTL--LCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK 142 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHT-TCCCE--EEEEEEECTTSCEEEEECCSSSHHHHHHHHHH
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHc-CCcce--ecceeEEcCCceEEeeecCCCchHHHHHHHHH
Confidence 467999999999999999 999999999999888899887 99988 8 5666665553 1 1488889999999999
Q ss_pred CCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccc-ccChhHHHHHHHHhhh
Q 020871 253 ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS-NVRLKDLELLLQNVVA 318 (320)
Q Consensus 253 ~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~~l~~~~~ 318 (320)
+.|++|+||||+.+|+.+|+.+|+.+++ +. . ..+.. ..+++. ..++.+|.++|++++.
T Consensus 143 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~---~-~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 201 (206)
T 1rku_A 143 SLYYRVIAAGDSYNDTTMLSEAHAGILF-HA---P-ENVIR---EFPQFPAVHTYEDLKREFLKASS 201 (206)
T ss_dssp HTTCEEEEEECSSTTHHHHHHSSEEEEE-SC---C-HHHHH---HCTTSCEECSHHHHHHHHHHHCS
T ss_pred hcCCEEEEEeCChhhHHHHHhcCccEEE-CC---c-HHHHH---HHhhhccccchHHHHHHHHHHhc
Confidence 9999999999999999999999998664 22 1 22211 112332 3467788888877653
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-21 Score=170.34 Aligned_cols=133 Identities=23% Similarity=0.394 Sum_probs=112.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc--eEEeCCCCC-----------CCCCCHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--CFLAGDDVK-----------QKKPDPSIY 244 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd--~v~~~~~~~-----------~~KP~~~~~ 244 (320)
..++||+.++|+.|+++|++++|+||+....+...++.+ |+..+ |+ .+++++++. .+||+|++|
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~l-gL~~~--Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~ 290 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL-GLLPY--FEADFIATASDVLEAENMYPQARPLGKPNPFSY 290 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCGGG--SCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-CChHh--cCCCEEEecccccccccccccccCCCCCCHHHH
Confidence 467899999999999999999999999999899999987 99988 88 888887764 489999999
Q ss_pred HHHHHHcC--------------CCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc---hhhcc--ccceecccccccC
Q 020871 245 VTAAKRLG--------------ISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA---EQDFK--DAIAIYPDLSNVR 305 (320)
Q Consensus 245 ~~~~~~l~--------------~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~---~~~l~--~~~~~~~~~~~~~ 305 (320)
..+++++| ++|++|+||||+.+|+.+|++|||.+|++.++... .+.+. .++.++. +
T Consensus 291 ~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~-----s 365 (384)
T 1qyi_A 291 IAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN-----H 365 (384)
T ss_dssp HHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES-----S
T ss_pred HHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEEC-----C
Confidence 99999999 89999999999999999999999999999887642 22332 3444544 4
Q ss_pred hhHHHHHHHHhhh
Q 020871 306 LKDLELLLQNVVA 318 (320)
Q Consensus 306 ~~~l~~~l~~~~~ 318 (320)
+.+|..+++..+.
T Consensus 366 l~eL~~~l~~~~~ 378 (384)
T 1qyi_A 366 LGELRGVLDNLLE 378 (384)
T ss_dssp GGGHHHHHSCTTT
T ss_pred HHHHHHHHHHHHh
Confidence 6677777776543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-22 Score=164.95 Aligned_cols=127 Identities=14% Similarity=0.173 Sum_probs=92.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc--cccCcc--eEEeCCC----CCCCCCCHHHHHHHH-
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME--RFEGLD--CFLAGDD----VKQKKPDPSIYVTAA- 248 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~--~~~~fd--~v~~~~~----~~~~KP~~~~~~~~~- 248 (320)
..++||+.++|+.|++.|++++++||+....+...++.+ |+. .+ |. .++..+. +...||++..+...+
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYL-NIPRENI--FAVETIWNSDGSFKELDNSNGACDSKLSAFD 157 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCCGGGE--EEEEEEECTTSBEEEEECTTSTTTCHHHHHH
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHc-CCCcccE--EEeeeeecCCCceeccCCCCCCcccHHHHHH
Confidence 458999999999999999999999999999899899887 884 34 33 2332333 245777776555554
Q ss_pred HHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCch--hhccccceecccccccChhHHHHHH
Q 020871 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE--QDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 249 ~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~--~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+.+|++|++|++|||+.+|++++ ++|+.++++..+.... .....+++++++ +.+|.++|
T Consensus 158 ~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~-----~~el~~~l 218 (219)
T 3kd3_A 158 KAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARN-----VAELASLI 218 (219)
T ss_dssp HHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESS-----HHHHHHHH
T ss_pred HHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCC-----HHHHHHhh
Confidence 55699999999999999999998 6899877776554332 222345555544 55555543
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=178.21 Aligned_cols=100 Identities=16% Similarity=0.195 Sum_probs=89.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEE-------e---CCCCCCCCCCHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFL-------A---GDDVKQKKPDPSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~-------~---~~~~~~~KP~~~~~~~~ 247 (320)
+.++||+.++|+.|++.|++++++||+........++.+ |+..+ |+..+ + .+++..+||+++.|..+
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~l-gl~~~--~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~ 331 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEEL-MLDYV--AANELEIVDGTLTGRVVGPIIDRAGKATALREF 331 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCSEE--EEECEEEETTEEEEEECSSCCCHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc-Cccce--eeeeEEEeCCEEEeeEccCCCCCcchHHHHHHH
Confidence 479999999999999999999999999999999999987 99877 54332 2 23556689999999999
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
++++|++|++|+||||+.+|+.+++.+|+.+++
T Consensus 332 ~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 332 AQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 999999999999999999999999999998876
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=161.54 Aligned_cols=132 Identities=29% Similarity=0.413 Sum_probs=106.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch---------------hhHHHHHHHhhCCccccCcceEE-eC----------
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFL-AG---------- 231 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---------------~~~~~~l~~~~~l~~~~~fd~v~-~~---------- 231 (320)
..++||+.++|+.|+++|++++++||+.. ..+...++.+ |+. |+.++ +.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----~~~~~~~~~~~~g~~~~~ 129 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE-GVF----VDMVLACAYHEAGVGPLA 129 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT-TCC----CSEEEEECCCTTCCSTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc-CCc----eeeEEEeecCCCCceeec
Confidence 46899999999999999999999999987 6677788886 764 34433 33
Q ss_pred -CCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeE-EEEeCCCCchhhccccceecccccccChhHH
Q 020871 232 -DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 309 (320)
Q Consensus 232 -~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~-v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l 309 (320)
+++..+||+|.+|..+++++|++|++|+||||+.+|+++|+++|+.+ +++.++....+.. ...+++..-++.+|
T Consensus 130 ~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~----~~~~~~~i~~l~el 205 (218)
T 2o2x_A 130 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGF----AIRPLRDSSELGDL 205 (218)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTE----EEEEESSHHHHHHH
T ss_pred ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccc----cCCCCEecccHHHH
Confidence 56778999999999999999999999999999999999999999999 9998876554322 22344444456777
Q ss_pred HHHHHHhhh
Q 020871 310 ELLLQNVVA 318 (320)
Q Consensus 310 ~~~l~~~~~ 318 (320)
.++++++.+
T Consensus 206 ~~~l~~~~~ 214 (218)
T 2o2x_A 206 LAAIETLGR 214 (218)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhc
Confidence 777776654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-21 Score=170.16 Aligned_cols=131 Identities=18% Similarity=0.148 Sum_probs=106.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEE----------eCCCCCCCCCCHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFL----------AGDDVKQKKPDPSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~----------~~~~~~~~KP~~~~~~~~ 247 (320)
..++||+.++|+.|++.|++++++||+.....+..++.+ |+..+ |+..+ .++++..+||+|+.|..+
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~l-gl~~~--~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~ 253 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQL-SLDYA--QSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL 253 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCCeE--EeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence 579999999999999999999999999999888888887 99877 55432 124666789999999999
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhhh
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
++++|+++++|++|||+.||+.|++.+|+.+++ + + .......++.++ ...++.++..+|++.+.
T Consensus 254 ~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~-~--~~~~~~~a~~v~---~~~~l~~v~~~L~~~l~ 317 (335)
T 3n28_A 254 AQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-H-A--KPKVEAKAQTAV---RFAGLGGVVCILSAALV 317 (335)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S-C--CHHHHTTSSEEE---SSSCTHHHHHHHHHHHH
T ss_pred HHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-C-C--CHHHHhhCCEEE---ecCCHHHHHHHHHhHHH
Confidence 999999999999999999999999999998877 2 2 222234455544 33466788888876654
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.2e-21 Score=158.44 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=84.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeC-C---------CCCCCCCCHHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG-D---------DVKQKKPDPSIYVTAA 248 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~-~---------~~~~~KP~~~~~~~~~ 248 (320)
.++||+.++|+.|+++|++++|+||+....++..++.+ |+..+ |...+.. + ....++++++.+..++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~-g~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~ 168 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAF-GVQHL--IATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWL 168 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCCEE--EECEEEEETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCCEE--EEcceEEECCEEeeeecCCCCcchHHHHHHHHHH
Confidence 57999999999999999999999999999999999987 98866 4433221 1 2234567788899999
Q ss_pred HHcC---CCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 249 KRLG---ISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 249 ~~l~---~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
+++| ++|++|++|||+.+|+.+++.+|+.+++
T Consensus 169 ~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 169 AGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAA 203 (232)
T ss_dssp HHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred HHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence 9999 9999999999999999999999998765
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-22 Score=174.15 Aligned_cols=129 Identities=14% Similarity=0.204 Sum_probs=96.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHH---HHHHhhCCccccCcceEEeCCC-CCCCCCCHHHHHHHHHHcCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLAGDD-VKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~---~l~~~~~l~~~~~fd~v~~~~~-~~~~KP~~~~~~~~~~~l~~~ 254 (320)
.+++++.+++..| ..|+++ ++||........ .++.. ++..+ |+.++++++ +..+||++.+|..+++++|++
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~-~l~~~--~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~ 211 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAG-SIMAA--IEASTGRKPDLIAGKPNPLVVDVISEKFGVP 211 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHH-HHHHH--HHHHHSCCCSEECSTTSTHHHHHHHHHHTCC
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCcccccc-HHHHH--HHHHhCCCCcccCCCCCHHHHHHHHHHhCCC
Confidence 4678999999999 788988 899986542211 11221 44555 677777777 889999999999999999999
Q ss_pred CCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 255 EKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 255 ~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
|++|++|||++ ||++||+.+|+.+++|.++....+.+... ...|++..-++.+|.+++
T Consensus 212 ~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~-~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 212 KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA-ETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHC-SSCCSEEESSHHHHHHHH
T ss_pred CceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhc-CCCCCEEECCHHHHHHHh
Confidence 99999999995 99999999999999999987665444311 112444444566666554
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.86 E-value=4.7e-22 Score=166.73 Aligned_cols=127 Identities=14% Similarity=0.117 Sum_probs=95.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCC--------CCCCHHH-HH---
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ--------KKPDPSI-YV--- 245 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~--------~KP~~~~-~~--- 245 (320)
..++||+.++|+.|+++|++++|+||+....+...++ |+..+ +.++++++... +||+|.. +.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~~---~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~ 149 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVEK---DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG 149 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSCG---GGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCCC---CeEEeeeeEEcCCceEEecCCCCccccccccC
Confidence 5799999999999999999999999999887776665 55443 77887766543 7899884 54
Q ss_pred ----HHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHh
Q 020871 246 ----TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 246 ----~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
.++++++++|++|+||||+.+|+.+|+++|+.++. ++ ..+.+.... .+++...++.+|.++|.++
T Consensus 150 ~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~--~~~~~~~~~--~~~~~~~~~~el~~~l~~~ 218 (236)
T 2fea_A 150 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DY--LLNECREQN--LNHLPYQDFYEIRKEIENV 218 (236)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HH--HHHHHHHTT--CCEECCSSHHHHHHHHHTS
T ss_pred CcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hH--HHHHHHHCC--CCeeecCCHHHHHHHHHHh
Confidence 88999999999999999999999999999998863 21 112221110 1344444677777777664
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=156.83 Aligned_cols=116 Identities=23% Similarity=0.212 Sum_probs=89.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCC----------CCCCCCCHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD----------VKQKKPDPSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~----------~~~~KP~~~~~~~~ 247 (320)
..++|++.++|+.|++.|++++++|++........++.+ ++..+ |+..+...+ ...++++++.+..+
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~ 151 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL-GLDYA--FANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 151 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc-CCCeE--EEeeeEEECCEEcCCcccCccCCccHHHHHHHH
Confidence 467899999999999999999999998887777777776 88766 554332211 12356778999999
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
++++|+++++|++|||+.||+++++.||+.++ +. + .......+++++.+
T Consensus 152 ~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~-~~-~--~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 152 AKIEGINLEDTVAVGDGANDISMFKKAGLKIA-FC-A--KPILKEKADICIEK 200 (211)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-ES-C--CHHHHTTCSEEECS
T ss_pred HHHcCCCHHHEEEEecChhHHHHHHHCCCEEE-EC-C--CHHHHhhcceeecc
Confidence 99999999999999999999999999999754 33 2 22222456666655
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.9e-23 Score=166.67 Aligned_cols=185 Identities=12% Similarity=0.122 Sum_probs=125.6
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccccC
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (320)
++++|+||+||||+|+...+..+|++++.+++ ...... + .+.+ ....+... .
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~-~~~~~~---~-------------~~~~---~~~~~~~~--~------ 54 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQP-FIALED---R-------------RGFW---VSEQYGRL--R------ 54 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC-CCCGGG---C-------------CSSC---HHHHHHHH--S------
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcCC-CCCHHH---h-------------cCCc---HHHHHHhc--C------
Confidence 57899999999999999999999999988762 111100 0 0111 11111110 0
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHC-CCcEEEEeCCchhhHHHHHHHhhCCcc-cc
Q 020871 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMER-FE 223 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~i~i~Tn~~~~~~~~~l~~~~~l~~-~~ 223 (320)
....+ .+. +.|..........++||+.++|+.|++. |++++|+||+........++.+ |+.. +
T Consensus 55 -----~~~~~----~~~----~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~-~l~~~~- 119 (197)
T 1q92_A 55 -----PGLSE----KAI----SIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKY-AWVEKY- 119 (197)
T ss_dssp -----TTHHH----HHH----HHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHH-HHHHHH-
T ss_pred -----HHHHH----HHH----HHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHh-chHHHh-
Confidence 01111 111 1222110112467999999999999999 9999999999988788888886 7777 7
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhh----HHHHH-HcCCeEEEEeCCCCchhhccccceec
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG----LQAAT-RAGMACVITYTSSTAEQDFKDAIAIY 298 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~D----v~~a~-~aG~~~v~v~~~~~~~~~l~~~~~~~ 298 (320)
|+ ..+++++|++|++|++|||+..| +.+|+ ++|+.+|++.++......+......+
T Consensus 120 -f~------------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v 180 (197)
T 1q92_A 120 -FG------------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRL 180 (197)
T ss_dssp -HC------------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEE
T ss_pred -ch------------------HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhh
Confidence 64 45778899999999999999998 99999 99999999988765432222111122
Q ss_pred ccccccCh-hHHHHHHHHhh
Q 020871 299 PDLSNVRL-KDLELLLQNVV 317 (320)
Q Consensus 299 ~~~~~~~~-~~l~~~l~~~~ 317 (320)
. ++ +++..+|+.+.
T Consensus 181 ~-----~~~~~l~~~l~~~~ 195 (197)
T 1q92_A 181 H-----SWADDWKAILDSKR 195 (197)
T ss_dssp C-----CTTSCHHHHHHTTC
T ss_pred h-----hHHHHHHHHhcccc
Confidence 2 45 47778877543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-22 Score=172.02 Aligned_cols=126 Identities=13% Similarity=0.130 Sum_probs=97.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhH--HHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV--ILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~--~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
...+|++.++++.|+ .|+++ ++||.+.... ...+....++..+ |+.+++++++..+||+|++|..++++ ++|
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~ 202 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAA--LKVATNVEPIIIGKPNEPMYEVVREM--FPG 202 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHH--HHHHHCCCCEECSTTSHHHHHHHHHH--STT
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHH--HHHHhCCCccEecCCCHHHHHHHHHh--CCc
Confidence 457899999999999 89998 9999987543 2222221245566 78888888888999999999999999 999
Q ss_pred CCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc----ccceecccccccChhHHHHHHH
Q 020871 256 KDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 256 ~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
++|+||||++ +|+.+|+++|+.+++|.++....+.+. .+++++++ +.+|.++|+
T Consensus 203 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~-----l~el~~~l~ 261 (263)
T 1zjj_A 203 EELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPS-----VYELIDYLK 261 (263)
T ss_dssp CEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESS-----GGGGGGGGC
T ss_pred ccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECC-----HHHHHHHHh
Confidence 9999999996 999999999999999998877655543 34444444 445544443
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=155.65 Aligned_cols=103 Identities=17% Similarity=0.273 Sum_probs=88.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCC---------------chhhHHHHHHHhhCCccccCcceEEeC-----CCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAA---------------TKSSVILCLENLIGMERFEGLDCFLAG-----DDVKQK 237 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~---------------~~~~~~~~l~~~~~l~~~~~fd~v~~~-----~~~~~~ 237 (320)
..++||+.++|+.|++.|++++|+||+ ....+...++.+ |+. |+.++.+ ++++..
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----fd~v~~s~~~~~~~~~~~ 115 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQ-GVQ----FDEVLICPHLPADECDCR 115 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHT-TCC----EEEEEEECCCGGGCCSSS
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHc-CCC----eeEEEEcCCCCccccccc
Confidence 479999999999999999999999998 566677788876 775 5777644 788899
Q ss_pred CCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 238 KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
||+|++|..+++++|++|++|+||||+.+|+++|+++|+.++++.++.
T Consensus 116 KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp TTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 999999999999999999999999999999999999999999998764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.3e-21 Score=153.07 Aligned_cols=102 Identities=14% Similarity=0.174 Sum_probs=91.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCc-hhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT-KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~-~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
..++||+.++|+.|+++|++++++||+. .......++.+ |+..+ |+.++.. .+|+++.|..+++++|++|+
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~-gl~~~--f~~~~~~-----~~~k~~~~~~~~~~~~~~~~ 138 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELF-DLFRY--FVHREIY-----PGSKITHFERLQQKTGIPFS 138 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHT-TCTTT--EEEEEES-----SSCHHHHHHHHHHHHCCCGG
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHc-CcHhh--cceeEEE-----eCchHHHHHHHHHHcCCChH
Confidence 5789999999999999999999999998 68888889886 99988 8877543 35788999999999999999
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
+|+||||+.+|+++|+++|+.++++.++...
T Consensus 139 ~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~ 169 (187)
T 2wm8_A 139 QMIFFDDERRNIVDVSKLGVTCIHIQNGMNL 169 (187)
T ss_dssp GEEEEESCHHHHHHHHTTTCEEEECSSSCCH
T ss_pred HEEEEeCCccChHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999999999999887653
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-22 Score=163.34 Aligned_cols=160 Identities=15% Similarity=0.198 Sum_probs=112.9
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccC-CCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccccC
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-CDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (320)
.++|+||+||||+|+...+..+|.+++. |.+ .+....+.+. ....+... +
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~~-------------------~~~~~~~~-~------- 52 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGFL-------------------AREQYRAL-R------- 52 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSSC-------------------HHHHHHHH-C-------
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHhh-------------------HHHHHHHH-h-------
Confidence 5799999999999999999999998876 554 2211111110 00111110 0
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHC-CCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
.. +.+.+.+.|.+........++||+.++|+.|++. |++++++||+........++.+ |+
T Consensus 53 -----~~--------~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~-gl----- 113 (193)
T 2i7d_A 53 -----PD--------LADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKY-RW----- 113 (193)
T ss_dssp -----TT--------HHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHH-HH-----
T ss_pred -----HH--------HHHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHh-Cc-----
Confidence 00 1111222332221113467899999999999999 9999999999988888888886 66
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhh----HHHHH-HcCCeEEEEeCCCCch
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG----LQAAT-RAGMACVITYTSSTAE 288 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~D----v~~a~-~aG~~~v~v~~~~~~~ 288 (320)
|+.++++ .+++++|++|++|+||||+.+| +.+|+ ++|+.+|++.++....
T Consensus 114 f~~i~~~--------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~ 168 (193)
T 2i7d_A 114 VEQHLGP--------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRH 168 (193)
T ss_dssp HHHHHCH--------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTT
T ss_pred hhhhcCH--------------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcc
Confidence 4666654 2788999999999999999998 99999 9999999998765543
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-21 Score=157.41 Aligned_cols=122 Identities=19% Similarity=0.141 Sum_probs=93.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCC-CCCCCCHHHHHHHHHHcCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV-KQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~-~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
..++||+.++|+.|++.|++++++||+........ +.+ |+..+ ++.+...++. ...+|.+.....+++++ +|+
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~ 151 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KEL-GDEFM--ANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDG 151 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTT-SSEEE--EEEEEEETTEEEEEECCSSCHHHHHGGG--TTS
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHc-Cchhh--eeeEEeeCCceECCcCCccCHHHHHHhc--CcC
Confidence 57999999999999999999999999988877777 665 88877 6666654432 22456655566777777 899
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhh
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
+|++|||+.+|+++++.+|+.++ +.++.. .++++++ ++.+|.++|++++
T Consensus 152 ~~i~iGD~~~Di~~~~~ag~~v~-~~~~~~------~ad~v~~-----~~~el~~~l~~l~ 200 (201)
T 4ap9_A 152 FILAMGDGYADAKMFERADMGIA-VGREIP------GADLLVK-----DLKELVDFIKNLK 200 (201)
T ss_dssp CEEEEECTTCCHHHHHHCSEEEE-ESSCCT------TCSEEES-----SHHHHHHHHHTCC
T ss_pred cEEEEeCCHHHHHHHHhCCceEE-ECCCCc------cccEEEc-----cHHHHHHHHHHhh
Confidence 99999999999999999999854 433322 3444444 5777888888764
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.83 E-value=7.5e-21 Score=156.35 Aligned_cols=100 Identities=14% Similarity=0.096 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC---CCCCCCCCHHHHHHHHHHcCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD---DVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~---~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
.++|++.++|+.|+++|++++++||+........++.+ ..+ |+.++.+. +....||+|+.|..+++++|+
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l---~~~--f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~-- 160 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTL---ADN--FHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI-- 160 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHH---HHH--TTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE--
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---HHh--cCccccccchhhhcCCCCCHHHHHHHHHHCCC--
Confidence 36789999999999999999999999866555555542 445 55553222 345689999999999999998
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
|+||||+.+|+++|+++|+.++++.++...
T Consensus 161 --~l~VGDs~~Di~aA~~aG~~~i~v~~g~~~ 190 (211)
T 2b82_A 161 --RIFYGDSDNDITAARDVGARGIRILRASNS 190 (211)
T ss_dssp --EEEEESSHHHHHHHHHTTCEEEECCCCTTC
T ss_pred --EEEEECCHHHHHHHHHCCCeEEEEecCCCC
Confidence 999999999999999999999999887654
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-21 Score=163.66 Aligned_cols=131 Identities=12% Similarity=0.133 Sum_probs=85.3
Q ss_pred ChhHHHHHHHHHHC-CCcEEEEeCCchhhHHHHHHHhhCCcccc-CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 181 RPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERFE-GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 181 ~~g~~~~l~~L~~~-g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~-~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
++++.+.+..|++. |+++ +++|.........+.. .++..++ .++..+..+.+..+||++.+|..+++++|+++++|
T Consensus 133 ~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~ 210 (271)
T 2x4d_A 133 YQNMNNAFQVLMELEKPVL-ISLGKGRYYAATSGLM-LDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQA 210 (271)
T ss_dssp HHHHHHHHHHHHHCSSCCE-EEECCCSEEEETTEEE-ECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHhcCCCeE-EEEcCCcccccCCCcc-cChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceE
Confidence 56777778888777 7877 6666543222111111 1222220 01123344567789999999999999999999999
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEeCCCCch-hhccccceecccccccChhHHHHHHHH
Q 020871 259 LVVEDSV-IGLQAATRAGMACVITYTSSTAE-QDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 259 v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
++|||+. ||+.|++.+|+.+++|.++.... +.+.. ...+++..-++.+|.++|.+
T Consensus 211 i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~--~~~~~~~~~~~~el~~~l~~ 267 (271)
T 2x4d_A 211 VMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHP--EVKADGYVDNLAEAVDLLLQ 267 (271)
T ss_dssp EEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCS--SCCCSEEESSHHHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhccc--CCCCCEEeCCHHHHHHHHHh
Confidence 9999999 99999999999999998874432 22210 11233333456666666654
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.5e-22 Score=169.77 Aligned_cols=117 Identities=15% Similarity=0.246 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHCCCcEEEEeCCchhhH--H--HHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHc----CCC
Q 020871 183 GVLRLMDEAKAAGKKVAVCSAATKSSV--I--LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL----GIS 254 (320)
Q Consensus 183 g~~~~l~~L~~~g~~i~i~Tn~~~~~~--~--~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l----~~~ 254 (320)
...++++.|+++|++ +++||.+.... . ..++.. ++..+ |+.+++++++..+||+|++|..+++++ |++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~-~l~~~--f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 224 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIG-GVATM--IESILGRRFIRFGKPDSQMFMFAYDMLRQKMEIS 224 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHH-HHHHH--HHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCC
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCC-hHHHH--HHHHhCCceeEecCCCHHHHHHHHHHHhhccCCC
Confidence 566667789999999 99999987654 2 112333 66777 899999999999999999999999999 999
Q ss_pred CCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc--------ccceecccccc
Q 020871 255 EKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK--------DAIAIYPDLSN 303 (320)
Q Consensus 255 ~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~--------~~~~~~~~~~~ 303 (320)
|++|+||||++ +|+.+|+++|+.+++|.++....+.+. .++++++++.+
T Consensus 225 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~e 282 (284)
T 2hx1_A 225 KREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVI 282 (284)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCC
T ss_pred cceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhh
Confidence 99999999996 999999999999999999877655443 45666666654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-22 Score=173.52 Aligned_cols=110 Identities=14% Similarity=0.145 Sum_probs=91.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhH--H-HHHHHhhC-CccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV--I-LCLENLIG-MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI 253 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~--~-~~l~~~~~-l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~ 253 (320)
..++|++.+++..|++.|+ ++++||.+.... . ..+... | +..+ |+.+++++++..+||+|.+|..+++++|+
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~-g~l~~~--~~~~~~~~~~~~~KP~~~~~~~~~~~lgi 230 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGT-GSLAAA--VETASGRQALVVGKPSPYMFECITENFSI 230 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECH-HHHHHH--HHHHHTCCCEECSTTSTHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCC-cHHHHH--HHHHhCCCceeeCCCCHHHHHHHHHHcCC
Confidence 3568999999999999999 999999986543 1 122222 3 4556 78888888888999999999999999999
Q ss_pred CCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 254 SEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 254 ~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
+|++|+||||+. +|+++|+++|+.+++|.++....+.+
T Consensus 231 ~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~ 269 (306)
T 2oyc_A 231 DPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEA 269 (306)
T ss_dssp CGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHH
T ss_pred ChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHH
Confidence 999999999997 99999999999999999987665443
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-20 Score=146.53 Aligned_cols=111 Identities=16% Similarity=0.178 Sum_probs=90.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEE
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL 259 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v 259 (320)
..|+..++|+.|++.|++++++||+....+...++.+ |+..+ |+. +||+++.|..++++++++|++|+
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~--~~~---------~kp~~~~~~~~~~~~~~~~~~~~ 104 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKEL-GVEEI--YTG---------SYKKLEIYEKIKEKYSLKDEEIG 104 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHT-TCCEE--EEC---------C--CHHHHHHHHHHTTCCGGGEE
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc-CCHhh--ccC---------CCCCHHHHHHHHHHcCCCHHHEE
Confidence 4567789999999999999999999999899999887 88776 542 69999999999999999999999
Q ss_pred EEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC
Q 020871 260 VVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 305 (320)
Q Consensus 260 ~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~ 305 (320)
||||+.+|+.+|+.+|+.+++.+ + .......+++++.+..+..
T Consensus 105 ~vGD~~~Di~~a~~ag~~~~~~~-~--~~~~~~~a~~v~~~~~~~g 147 (162)
T 2p9j_A 105 FIGDDVVDIEVMKKVGFPVAVRN-A--VEEVRKVAVYITQRNGGEG 147 (162)
T ss_dssp EEECSGGGHHHHHHSSEEEECTT-S--CHHHHHHCSEECSSCSSSS
T ss_pred EECCCHHHHHHHHHCCCeEEecC-c--cHHHHhhCCEEecCCCCCc
Confidence 99999999999999999976532 2 2222345777777766644
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4.4e-20 Score=157.34 Aligned_cols=122 Identities=12% Similarity=0.112 Sum_probs=86.4
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHH---HHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~---~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
.++++.+.+..++ .|. ..++||.+...... .... .++..+ |+.+++.+....+||++.+|..+++++|++|+
T Consensus 126 ~~~~~~~~~~~l~-~~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 200 (264)
T 3epr_A 126 TYDKLATATLAIQ-NGA-LFIGTNPDLNIPTERGLLPGA-GSLNAL--LEAATRIKPVFIGKPNAIIMNKALEILNIPRN 200 (264)
T ss_dssp CHHHHHHHHHHHH-TTC-EEEESCCCSEEEETTEEEECH-HHHHHH--HHHHHSCCCEECSTTSHHHHHHHHHHHTSCGG
T ss_pred CHHHHHHHHHHHH-CCC-eEEEEcCCccccCCCceecCc-cHHHHH--HHHHhCCCcccCCCCCHHHHHHHHHHhCcCcc
Confidence 3456666666663 344 33566654321100 0000 012233 56666677788999999999999999999999
Q ss_pred CEEEEecC-HhhHHHHHHcCCeEEEEeCCCCchhhcc----ccceecccccccCh
Q 020871 257 DCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVRL 306 (320)
Q Consensus 257 ~~v~VGD~-~~Dv~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~~~ 306 (320)
+|++|||+ .+|+.+|+++|+.+++|.++....+.+. .+++++.++.++..
T Consensus 201 ~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~~ 255 (264)
T 3epr_A 201 QAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTF 255 (264)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCCS
T ss_pred cEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHhc
Confidence 99999999 5999999999999999999887776665 46777777776543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-19 Score=147.67 Aligned_cols=112 Identities=10% Similarity=0.072 Sum_probs=91.1
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
+|+.|++.|++++|+||.....+...++.+ |+..+ |+.+ ||+++.+..+++++|++|++|++|||+.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~l-gi~~~--f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~n 151 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTL-GITHL--YQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLI 151 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHH-TCCEE--ECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCchh--hccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHH
Confidence 889999999999999999999999999997 98877 5533 88899999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC-hhHHHHHH
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL 313 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~l 313 (320)
|+.+++++|+.+++.+ ........+++++.+..+.- +.++.+++
T Consensus 152 Di~~~~~ag~~~a~~~---~~~~~~~~Ad~v~~~~~~~G~v~e~~~~l 196 (211)
T 3ij5_A 152 DWPVMAQVGLSVAVAD---AHPLLLPKAHYVTRIKGGRGAVREVCDLI 196 (211)
T ss_dssp GHHHHTTSSEEEECTT---SCTTTGGGSSEECSSCTTTTHHHHHHHHH
T ss_pred HHHHHHHCCCEEEeCC---ccHHHHhhCCEEEeCCCCCcHHHHHHHHH
Confidence 9999999999876532 23334456777777654443 45555444
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.80 E-value=7.8e-20 Score=157.69 Aligned_cols=117 Identities=15% Similarity=0.138 Sum_probs=89.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.|++++++||+....+...++.+ |+..+ |+.++ |. ....+++++++. ++
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~--f~~i~---------~~--~K~~~~~~l~~~-~~ 226 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV--IAEVL---------PH--QKSEEVKKLQAK-EV 226 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSCC---------TT--CHHHHHHHHTTT-CC
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-CCcee--eeecC---------hH--HHHHHHHHHhcC-Ce
Confidence 478999999999999999999999999999899999987 99887 66553 22 226788999999 99
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 258 CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
|+||||+.+|+.+|+++|+.++ +..+ .......++.++.+ .++.+|.++++.
T Consensus 227 ~~~vGDs~~Di~~a~~ag~~v~-~~~~--~~~~~~~ad~v~~~---~~~~~l~~~l~~ 278 (287)
T 3a1c_A 227 VAFVGDGINDAPALAQADLGIA-VGSG--SDVAVESGDIVLIR---DDLRDVVAAIQL 278 (287)
T ss_dssp EEEEECTTTCHHHHHHSSEEEE-ECCC--SCCSSCCSSEEESS---SCTHHHHHHHHT
T ss_pred EEEEECCHHHHHHHHHCCeeEE-eCCC--CHHHHhhCCEEEeC---CCHHHHHHHHHH
Confidence 9999999999999999999844 3322 22222344555411 346667666653
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=141.89 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=84.5
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
+|+.|++.|++++++||.........++++ |+..+ |+. .||+|+.+..+++++|++|++|+||||+.+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-gl~~~--~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~ 106 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKL-KVDYL--FQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLN 106 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHT-TCSEE--ECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGG
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHc-CCCEe--ecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 789999999999999999999999999987 88876 543 399999999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.+++.+|+.+++.+ ........+++++.+-..
T Consensus 107 Di~~~~~ag~~~~~~~---~~~~~~~~ad~v~~~~~~ 140 (164)
T 3e8m_A 107 DAKLLKRVGIAGVPAS---APFYIRRLSTIFLEKRGG 140 (164)
T ss_dssp GHHHHTTSSEEECCTT---SCHHHHTTCSSCCCCCTT
T ss_pred HHHHHHHCCCeEEcCC---hHHHHHHhCcEEeccCCC
Confidence 9999999999876532 233333456666665443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-20 Score=147.98 Aligned_cols=111 Identities=14% Similarity=0.133 Sum_probs=87.3
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
+|+.|++.|++++++||+....+...++.+ |+. + |. + .||+++.+..+++++|+++++|++|||+.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l-gi~-~--~~----~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~n 113 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKL-KIP-V--LH----G-----IDRKDLALKQWCEEQGIAPERVLYVGNDVN 113 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHH-TCC-E--EE----S-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHc-CCe-e--Ee----C-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHH
Confidence 889999999999999999999999999987 876 4 33 2 289999999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC-hhHHHHHH
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL 313 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~l 313 (320)
|+.+++.+|+.+++.+ ........++.++.+..+.. +.++.+++
T Consensus 114 D~~~~~~ag~~v~~~~---~~~~~~~~ad~v~~~~~~~g~~~~l~~~l 158 (176)
T 3mmz_A 114 DLPCFALVGWPVAVAS---AHDVVRGAARAVTTVPGGDGAIREIASWI 158 (176)
T ss_dssp GHHHHHHSSEEEECTT---CCHHHHHHSSEECSSCTTTTHHHHHHHHH
T ss_pred HHHHHHHCCCeEECCC---hhHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 9999999998865422 23333345666666544332 45555544
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-19 Score=153.87 Aligned_cols=131 Identities=9% Similarity=0.068 Sum_probs=97.5
Q ss_pred CCChhHHHHHHHHHHC-CCcEEEEeCC---------------------chhhHHHHHHHhhCCccccCcceE--------
Q 020871 179 EPRPGVLRLMDEAKAA-GKKVAVCSAA---------------------TKSSVILCLENLIGMERFEGLDCF-------- 228 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~-g~~i~i~Tn~---------------------~~~~~~~~l~~~~~l~~~~~fd~v-------- 228 (320)
..++++.++++.+++. |+++++.|+. ....+...++.. |+..+ |..+
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~~~~~~~~~~~ 198 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEY-GVSVN--INRCNPLAGDPE 198 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHH-TEEEE--EEECCGGGTCCT
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHc-CCCEE--EEEccccccCCC
Confidence 5778999999999998 9999999876 445556666665 77665 4433
Q ss_pred --EeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccCh
Q 020871 229 --LAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL 306 (320)
Q Consensus 229 --~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~ 306 (320)
+..+.+..++|++..+..+++++|+++++|++|||+.||+.+++.+|+.+++ +....+....+++++.+..+
T Consensus 199 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~---~~~~~~~~~~a~~v~~~~~~--- 272 (289)
T 3gyg_A 199 DSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL---KNATQEAKNLHNLITDSEYS--- 272 (289)
T ss_dssp TEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC---TTCCHHHHHHCCCBCSSCHH---
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE---CCccHHHHHhCCEEcCCCCc---
Confidence 4455567889999999999999999999999999999999999999977554 33333333456665554332
Q ss_pred hHHHHHHHHhhh
Q 020871 307 KDLELLLQNVVA 318 (320)
Q Consensus 307 ~~l~~~l~~~~~ 318 (320)
..+.+.+++++.
T Consensus 273 ~gv~~~~~~~~~ 284 (289)
T 3gyg_A 273 KGITNTLKKLIG 284 (289)
T ss_dssp HHHHHHHHHHTC
T ss_pred CHHHHHHHHHHH
Confidence 346677776654
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-20 Score=160.98 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=86.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.++||+.++|+.|++.|++++++||.........++.+ |+..+ |+.+++++.....||.++. + +|
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-gl~~~--f~~~~~~~k~~~~k~~~~~-------~-----~~ 208 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEEL-GLDDY--FAEVLPHEKAEKVKEVQQK-------Y-----VT 208 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSCCGGGHHHHHHHHHTT-------S-----CE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CChhH--hHhcCHHHHHHHHHHHHhc-------C-----CE
Confidence 68899999999999999999999999999999999997 99988 8877766443333333332 2 79
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
++|||+.||+++++.||+.+++ ++.....+..++.++ ...++.++..+++
T Consensus 209 ~~vGD~~nDi~~~~~Ag~~va~---~~~~~~~~~~a~~~~---~~~~~~~l~~~l~ 258 (280)
T 3skx_A 209 AMVGDGVNDAPALAQADVGIAI---GAGTDVAVETADIVL---VRNDPRDVAAIVE 258 (280)
T ss_dssp EEEECTTTTHHHHHHSSEEEEC---SCCSSSCCCSSSEEC---SSCCTHHHHHHHH
T ss_pred EEEeCCchhHHHHHhCCceEEe---cCCcHHHHhhCCEEE---eCCCHHHHHHHHH
Confidence 9999999999999999976554 333434444555444 2235667777665
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.2e-19 Score=143.46 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=89.7
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
+|+.|++.|++++++||.....+...++++ |+..+ |+.+ +++|+.+..+++++|++|++|+||||+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l-gl~~~--f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~n 121 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSL-GIEHL--FQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLP 121 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHH-TCSEE--ECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHc-CCHHH--hcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHH
Confidence 889999999999999999999999999997 99877 6643 66779999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC-hhHHHHHHH
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQ 314 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~l~ 314 (320)
|+.+++.+|+.+++. .........+++++.+..+.. +.++.+++.
T Consensus 122 Di~~~~~ag~~~~~~---~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~ 167 (189)
T 3mn1_A 122 DLPVIRRVGLGMAVA---NAASFVREHAHGITRAQGGEGAAREFCELIL 167 (189)
T ss_dssp GHHHHHHSSEEEECT---TSCHHHHHTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEeC---CccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 999999999986542 233334456677766643332 455555443
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8e-19 Score=140.73 Aligned_cols=118 Identities=13% Similarity=0.070 Sum_probs=93.9
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEE
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCL 259 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v 259 (320)
+.++..++|+.|+++|++++++||.....+...++.+ |+..+ |+. .||+++.+..+++++|++|++|+
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~l-gl~~~--~~~---------~k~k~~~~~~~~~~~~~~~~~~~ 103 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADL-GIKLF--FLG---------KLEKETACFDLMKQAGVTAEQTA 103 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHH-TCCEE--EES---------CSCHHHHHHHHHHHHTCCGGGEE
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHc-CCcee--ecC---------CCCcHHHHHHHHHHcCCCHHHEE
Confidence 4455668999999999999999999999999999987 88776 432 58999999999999999999999
Q ss_pred EEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChh-HHHHH
Q 020871 260 VVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLK-DLELL 312 (320)
Q Consensus 260 ~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~-~l~~~ 312 (320)
+|||+.+|+.+++.+|+.+++.+ ........+++++.+..+..+- ++.+.
T Consensus 104 ~vGD~~~Di~~~~~ag~~~~~~~---~~~~~~~~ad~v~~~~~~~g~~~~~~~~ 154 (180)
T 1k1e_A 104 YIGDDSVDLPAFAACGTSFAVAD---APIYVKNAVDHVLSTHGGKGAFREMSDM 154 (180)
T ss_dssp EEECSGGGHHHHHHSSEEEECTT---SCHHHHTTSSEECSSCTTTTHHHHHHHH
T ss_pred EECCCHHHHHHHHHcCCeEEeCC---ccHHHHhhCCEEecCCCCCcHHHHHHHH
Confidence 99999999999999999977532 2233335677787776555433 44433
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.4e-19 Score=145.25 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=90.4
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
.|+.|++.|++++|+||+....+...++.+ |+..+ |+. .||++..+..+++++|++|++|++|||+.|
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~l-gi~~~--~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~n 127 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKAL-GISLI--YQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLI 127 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHT-TCCEE--ECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGG
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHc-CCcEE--eeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHH
Confidence 478899999999999999999999999987 88776 443 389999999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC-hhHHHHHHH
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQ 314 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~l~ 314 (320)
|+.+++.+|+.+++. .........+++++.+..+.- +.++.+++.
T Consensus 128 Di~~~~~ag~~va~~---na~~~~~~~ad~v~~~~~~~G~~~~~~~~il 173 (195)
T 3n07_A 128 DWPVMEKVALRVCVA---DGHPLLAQRANYVTHIKGGHGAVREVCDLIL 173 (195)
T ss_dssp GHHHHTTSSEEEECT---TSCHHHHHHCSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEC---ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHH
Confidence 999999999886642 233344456777777654443 455555543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.9e-19 Score=142.78 Aligned_cols=113 Identities=19% Similarity=0.232 Sum_probs=90.3
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
.|+.|++.|++++++||+....+...++.+ |+..+ |+.+ ||+++.+..+++++|++|++|+||||+.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~l-gl~~~--~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~ 121 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQL-GITHY--YKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLP 121 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHH-TCCEE--ECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHc-CCccc--eeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 578899999999999999999999999997 88876 5543 89999999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC-hhHHHHHHH
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQ 314 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~l~ 314 (320)
|+.+++.+|+.+++. .........+++++.+..+.. +.++.+++.
T Consensus 122 Di~~~~~ag~~~~~~---~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll 167 (191)
T 3n1u_A 122 DLPLIQQVGLGVAVS---NAVPQVLEFADWRTERTGGRGAVRELCDLIL 167 (191)
T ss_dssp GHHHHHHSSEEEECT---TCCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEeC---CccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 999999999987532 223334456777777654433 455555443
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-19 Score=152.73 Aligned_cols=221 Identities=11% Similarity=0.107 Sum_probs=129.8
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhc---ccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCC--
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHF---NVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWP-- 139 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-- 139 (320)
|++|+|+||+||||+|+...+.+.+.++++++ |+.....++| +...+..++...++.
T Consensus 3 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR------------------~~~~~~~~~~~l~~~~~ 64 (279)
T 4dw8_A 3 LKYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGR------------------PTYGIVPLANELRMNEF 64 (279)
T ss_dssp -CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEECSS------------------CHHHHHHHHHHTTGGGT
T ss_pred CcceEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEcCC------------------ChHHHHHHHHHhCCCCC
Confidence 56999999999999999877777777776654 5554443333 333333344333321
Q ss_pred ----------------CccccCCCCCCchhHHHHHHHHHHH--------------------HHHHHHHHHHhCCCCCChh
Q 020871 140 ----------------SSTIFDNPPVTDDDQAKLIDLIQDW--------------------KTERYQQIIKSGTVEPRPG 183 (320)
Q Consensus 140 ----------------~~~~~~~~~~~~~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~~~~~~g 183 (320)
..+++.....+.+...++.+.+.+. +....... . ...+++
T Consensus 65 ~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~ 140 (279)
T 4dw8_A 65 GGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFL-N---KMAIRE 140 (279)
T ss_dssp TCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHH-H---TCEEEE
T ss_pred CCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhh-c---CCCccc
Confidence 1122222344444444444433221 00000100 0 012234
Q ss_pred HHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhh-CCccccCcceEEeCC----CCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI-GMERFEGLDCFLAGD----DVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 184 ~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~-~l~~~~~fd~v~~~~----~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
+.+++..++...+++.++++ ........+.+. .+... ++.+.++. -...+++++..+..+++++|+++++|
T Consensus 141 ~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ 216 (279)
T 4dw8_A 141 TNDFLTDITLPVAKCLIVGD--AGKLIPVESELCIRLQGK--INVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEV 216 (279)
T ss_dssp CSCHHHHSCSCCSCEEEESC--HHHHHHHHHHHHHHTTTT--CEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHhhcCCceEEEEeCC--HHHHHHHHHHHHHHhcCC--EEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHE
Confidence 44455555566677766643 222333333331 12222 45554442 34567788999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhh
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
++|||+.||++|++.+|+.+++ +++..+....+++++++..+ +.+...|++++
T Consensus 217 i~~GD~~NDi~m~~~ag~~vam---~na~~~~k~~A~~v~~~~~e---~Gv~~~i~~~~ 269 (279)
T 4dw8_A 217 IAIGDGYNDLSMIKFAGMGVAM---GNAQEPVKKAADYITLTNDE---DGVAEAIERIF 269 (279)
T ss_dssp EEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHCSEECCCGGG---THHHHHHHHHC
T ss_pred EEECCChhhHHHHHHcCcEEEc---CCCcHHHHHhCCEEcCCCCC---cHHHHHHHHHH
Confidence 9999999999999999976655 55555555678888766443 56777777655
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=133.13 Aligned_cols=107 Identities=10% Similarity=0.108 Sum_probs=75.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCC---chh--hHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHc
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAA---TKS--SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL 251 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~---~~~--~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l 251 (320)
...++||+.++|+.|++. ++++|+||+ ... .....+...++...+ ++.++++++. .+
T Consensus 67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~--~~~i~~~~~~---------------~l 128 (180)
T 3bwv_A 67 NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP--QHFVFCGRKN---------------II 128 (180)
T ss_dssp SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCG--GGEEECSCGG---------------GB
T ss_pred cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc--ccEEEeCCcC---------------ee
Confidence 467999999999999985 999999998 321 123445554466556 7788887652 11
Q ss_pred CCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHh
Q 020871 252 GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 252 ~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
++|++|||+.+|+. ..+| .+++++++.... .. +++...++.+|..+++++
T Consensus 129 ----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~-----~~~~i~~~~el~~~l~~~ 178 (180)
T 3bwv_A 129 ----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EH-----RFERVSGWRDVKNYFNSI 178 (180)
T ss_dssp ----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CC-----SSEEECSHHHHHHHHHHH
T ss_pred ----cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CC-----CceecCCHHHHHHHHHHh
Confidence 77999999999985 5689 999998664321 22 333444677888888765
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=155.67 Aligned_cols=97 Identities=22% Similarity=0.303 Sum_probs=86.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCc------------hhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAAT------------KSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~------------~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~ 246 (320)
.++||+.++|+.|+++|++++|+||.. ...+...++.+ |+. |+.+++++++..+||+|++|..
T Consensus 87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~l-gl~----fd~i~~~~~~~~~KP~p~~~~~ 161 (416)
T 3zvl_A 87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKL-GVP----FQVLVATHAGLNRKPVSGMWDH 161 (416)
T ss_dssp ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHH-TSC----CEEEEECSSSTTSTTSSHHHHH
T ss_pred hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHc-CCC----EEEEEECCCCCCCCCCHHHHHH
Confidence 389999999999999999999999965 12256677776 773 7999999999999999999999
Q ss_pred HHHHcC----CCCCCEEEEecCH-----------------hhHHHHHHcCCeEEE
Q 020871 247 AAKRLG----ISEKDCLVVEDSV-----------------IGLQAATRAGMACVI 280 (320)
Q Consensus 247 ~~~~l~----~~~~~~v~VGD~~-----------------~Dv~~a~~aG~~~v~ 280 (320)
+++++| ++|++|+||||+. .|+.+|+++|+.++.
T Consensus 162 a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 162 LQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp HHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred HHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence 999998 9999999999997 799999999999764
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-18 Score=148.25 Aligned_cols=119 Identities=18% Similarity=0.151 Sum_probs=80.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHH---HHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~---~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
.++++.+.+..++. +. ..++||.+...... .... .++..+ |+.++..+....+||++.+|..+++++|++++
T Consensus 127 ~~~~~~~~~~~l~~-~~-~~i~~n~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 201 (266)
T 3pdw_A 127 TYEKFAVGCLAIRN-GA-RFISTNGDIAIPTERGLLPGN-GSLTSV--LTVSTGVQPVFIGKPESIIMEQAMRVLGTDVS 201 (266)
T ss_dssp CHHHHHHHHHHHHT-TC-EEEESCCCCEEEETTEEEECH-HHHHHH--HHHHHCCCCEECSTTSSHHHHHHHHHHTCCGG
T ss_pred CHHHHHHHHHHHHC-CC-eEEEEcCCceeECCCceEecc-hHHHHH--HHHHhCCCccccCCCCHHHHHHHHHHcCCChh
Confidence 45667777776665 34 45667665321100 0000 122333 56666677778899999999999999999999
Q ss_pred CEEEEecC-HhhHHHHHHcCCeEEEEeCCCCchhhccc----cceecccccc
Q 020871 257 DCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFKD----AIAIYPDLSN 303 (320)
Q Consensus 257 ~~v~VGD~-~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~----~~~~~~~~~~ 303 (320)
+|++|||+ .||+.|++.+|+.+++++++....+.+.. +++++.++.+
T Consensus 202 ~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~e 253 (266)
T 3pdw_A 202 ETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTE 253 (266)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGG
T ss_pred hEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHH
Confidence 99999999 69999999999999999998877666653 5666655444
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-18 Score=147.95 Aligned_cols=225 Identities=13% Similarity=0.122 Sum_probs=131.0
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhc---ccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCC-
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHF---NVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPS- 140 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 140 (320)
|++|+|+||+||||+|+...+.+.+.+++.++ |+.....+ |++...+..++...|+..
T Consensus 4 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT------------------GR~~~~~~~~~~~~~~~~~ 65 (290)
T 3dnp_A 4 MSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVT------------------NRHFRSAQKIAKSLKLDAK 65 (290)
T ss_dssp --CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEBC------------------SSCHHHHHHHHHHTTCCSC
T ss_pred CcceEEEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEC------------------CCChHHHHHHHHHcCCCCe
Confidence 56999999999999999877777777776654 55544433 444444444555554431
Q ss_pred -------------ccccCCCCCCchhHHHHHHHHHHHHHH---------H---------HHHHHHhC-------CCCCCh
Q 020871 141 -------------STIFDNPPVTDDDQAKLIDLIQDWKTE---------R---------YQQIIKSG-------TVEPRP 182 (320)
Q Consensus 141 -------------~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~---------~~~~~~~~-------~~~~~~ 182 (320)
.+++.....+.+...++.+.+.+.-.. + +....... .....+
T Consensus 66 ~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (290)
T 3dnp_A 66 LITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVE 145 (290)
T ss_dssp EEEGGGTEEESSTTSCSEECCCCHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECS
T ss_pred EEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccC
Confidence 122222333333333333222110000 0 00000000 023456
Q ss_pred hHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC----CCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD----DVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 183 g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
++.+++..+....+++.+ +.. ........+.+...... +..+.++. -...+.+++.++..+++++|+++++|
T Consensus 146 ~~~~~~~~~~~~~~ki~~-~~~-~~~~~~~~~~l~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ 221 (290)
T 3dnp_A 146 SLSDLLMDEPVSAPVIEV-YTE-HDIQHDITETITKAFPA--VDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDV 221 (290)
T ss_dssp CHHHHHHHSCCCCSEEEE-ECC-GGGHHHHHHHHHHHCTT--EEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGE
T ss_pred CHHHHHhcCCCCceEEEE-eCC-HHHHHHHHHHHHhhCCc--EEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHE
Confidence 777777777777778854 333 33344454442111111 34444332 24567788999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhh
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
++|||+.||++|++.||+.+++ +++..+....++++.++..+ +.+...|++++
T Consensus 222 i~~GD~~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~s~~e---dGv~~~i~~~~ 274 (290)
T 3dnp_A 222 VAIGHQYDDLPMIELAGLGVAM---GNAVPEIKRKADWVTRSNDE---QGVAYMMKEYF 274 (290)
T ss_dssp EEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCTTT---THHHHHHHHHH
T ss_pred EEECCchhhHHHHHhcCCEEEe---cCCcHHHHHhcCEECCCCCc---cHHHHHHHHHH
Confidence 9999999999999999987766 44455555678888766444 34556665554
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-18 Score=148.15 Aligned_cols=223 Identities=10% Similarity=0.091 Sum_probs=124.5
Q ss_pred CCCccEEEEecCCccccchH-HHHHHHHHHHHhc---ccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCC
Q 020871 64 SQSLQALIFDCDGVIIESEH-LHRQAYNDAFSHF---NVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWP 139 (320)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 139 (320)
.+++|+|+||+||||+++.. .+.+.+.++++++ |+.....++ ++...+..++...+..
T Consensus 18 ~~~~kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~v~iaTG------------------R~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVCSG------------------RQFSSEFKLFAPIKHK 79 (283)
T ss_dssp -CCCCEEEECCBTTTBSTTCSCCCHHHHHHHHHHHHTTCEEEEECS------------------SCHHHHHHHTGGGGGG
T ss_pred ccCceEEEEeCcCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcC------------------CCHHHHHHHHHHcCCC
Confidence 35799999999999999876 6666666666554 665544333 3333333333333321
Q ss_pred C-------------ccccCCCCCCchhHHHHHHHHHHHH------------------HHHHHHHHHhCCCCCChhHHHHH
Q 020871 140 S-------------STIFDNPPVTDDDQAKLIDLIQDWK------------------TERYQQIIKSGTVEPRPGVLRLM 188 (320)
Q Consensus 140 ~-------------~~~~~~~~~~~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~~~~~~g~~~~l 188 (320)
. .+++.....+.+...++.+.+.+.. ...+...+.. .........+-+
T Consensus 80 ~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 158 (283)
T 3dao_A 80 LLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRD-SYGFEMREVDDI 158 (283)
T ss_dssp CEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHH-TSCCCEEECSCG
T ss_pred cEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHH-hhcCCceEcCCH
Confidence 1 1222223334444333333332210 0001111100 011111111222
Q ss_pred HHHH-HCCCcEEEEe-CCchhh-HHHHHHHhhCCccccCcceEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCCEEEE
Q 020871 189 DEAK-AAGKKVAVCS-AATKSS-VILCLENLIGMERFEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVV 261 (320)
Q Consensus 189 ~~L~-~~g~~i~i~T-n~~~~~-~~~~l~~~~~l~~~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~l~~~~~~~v~V 261 (320)
..++ +..+++.++. ...... ...+.+.+ + .. +..+.++.. ...+.+++.++..+++++|++++++++|
T Consensus 159 ~~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~-~--~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~ 233 (283)
T 3dao_A 159 TRLDRNDIIKFTVFHPDKCEELCTPVFIPAW-N--KK--AHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCF 233 (283)
T ss_dssp GGCCCSCCCEEEEECSSCHHHHHTTTHHHHH-T--TT--EEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHcCccCceEEEEEcChHHHHHHHHHHHHHh-c--CC--EEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEE
Confidence 2244 5678888873 322222 22233333 3 22 455555432 3466778899999999999999999999
Q ss_pred ecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHh
Q 020871 262 EDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 262 GD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
||+.||++|++.+|+.+++ +++..+....++++.++..+ +.+...|+++
T Consensus 234 GD~~NDi~ml~~ag~~vam---~na~~~~k~~A~~v~~s~~e---dGv~~~l~~~ 282 (283)
T 3dao_A 234 GDNLNDIEMLQNAGISYAV---SNARQEVIAAAKHTCAPYWE---NGVLSVLKSF 282 (283)
T ss_dssp ECSGGGHHHHHHSSEEEEE---TTSCHHHHHHSSEEECCGGG---THHHHHHHHT
T ss_pred CCCHHHHHHHHhCCCEEEc---CCCCHHHHHhcCeECCCCCC---ChHHHHHHHh
Confidence 9999999999999988766 44455555678888775443 4566666654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.9e-19 Score=153.21 Aligned_cols=90 Identities=19% Similarity=0.288 Sum_probs=80.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++.|++++++||.+.......++.+ |+..+ |+.++ |+.+..++++++..+++
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-gl~~~--f~~~~-----------p~~k~~~~~~l~~~~~~ 200 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKEL-NIQEY--YSNLS-----------PEDKVRIIEKLKQNGNK 200 (263)
Confidence 469999999999999999999999999999999999987 99888 77665 34567899999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEEE
Q 020871 258 CLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
|+||||+.+|+.+++++|+.+.|.
T Consensus 201 ~~~VGD~~~D~~aa~~Agv~va~g 224 (263)
T 2yj3_A 201 VLMIGDGVNDAAALALADVSVAMG 224 (263)
Confidence 999999999999999999876554
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.2e-17 Score=131.07 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=85.5
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
+|+.|++.|++++++||+....+...++.+ |+..+ |+ ..||+++.+..+++++|++|++|+||||+.+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~l-gl~~~--~~---------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~ 128 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATL-GITHL--YQ---------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLI 128 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHH-TCCEE--EC---------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGG
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHc-CCcee--ec---------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 888999999999999999999899999887 88766 43 2599999999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 305 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~ 305 (320)
|+.+++.+|+.+++.+. .......+++++.+.....
T Consensus 129 Di~~a~~ag~~~~~~~~---~~~~~~~ad~v~~~~~~~g 164 (188)
T 2r8e_A 129 DWPVMEKVGLSVAVADA---HPLLIPRADYVTRIAGGRG 164 (188)
T ss_dssp GHHHHTTSSEEEECTTS---CTTTGGGSSEECSSCTTTT
T ss_pred HHHHHHHCCCEEEecCc---CHHHHhcCCEEEeCCCCCc
Confidence 99999999999765332 2222345677777765544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.73 E-value=5.8e-18 Score=141.26 Aligned_cols=108 Identities=15% Similarity=0.038 Sum_probs=74.3
Q ss_pred EEEEe-CCchhhHHHHHHHhhCCccccCcceEEeCC----CCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHH
Q 020871 198 VAVCS-AATKSSVILCLENLIGMERFEGLDCFLAGD----DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT 272 (320)
Q Consensus 198 i~i~T-n~~~~~~~~~l~~~~~l~~~~~fd~v~~~~----~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~ 272 (320)
+++++ +.........++.+ + .. |+.+ ++. .+..++|++..+..+++++|+++++|++|||+.||+.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~-~--~~--~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~ 186 (231)
T 1wr8_A 113 LVIMRETINVETVREIINEL-N--LN--LVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFK 186 (231)
T ss_dssp EEECTTTSCHHHHHHHHHHT-T--CS--CEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHH
T ss_pred EEEECCCCCHHHHHHHHHhc-C--Cc--EEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 35565 44566666666664 4 33 5655 432 2457899999999999999999999999999999999999
Q ss_pred HcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhh
Q 020871 273 RAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 273 ~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
.+|+.++ +.++ ..+....+++++.+..+ +.+.+.+++++
T Consensus 187 ~ag~~v~-~~~~--~~~~~~~a~~v~~~~~e---~Gv~~~l~~~~ 225 (231)
T 1wr8_A 187 VVGYKVA-VAQA--PKILKENADYVTKKEYG---EGGAEAIYHIL 225 (231)
T ss_dssp HSSEEEE-CTTS--CHHHHTTCSEECSSCHH---HHHHHHHHHHH
T ss_pred HcCCeEE-ecCC--CHHHHhhCCEEecCCCc---chHHHHHHHHH
Confidence 9999844 4332 33333456677665443 34555665544
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-18 Score=146.20 Aligned_cols=84 Identities=27% Similarity=0.378 Sum_probs=64.4
Q ss_pred CCC-CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccc---cceecccccccC
Q 020871 231 GDD-VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKD---AIAIYPDLSNVR 305 (320)
Q Consensus 231 ~~~-~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~---~~~~~~~~~~~~ 305 (320)
.+. +..+||++.+|..+++++|+++++|++|||++ +|+.+|+++|+.+++|.++....+.+.. .....+++..-+
T Consensus 179 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~ 258 (268)
T 3qgm_A 179 REPDVVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNS 258 (268)
T ss_dssp CCCSEECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESS
T ss_pred CCcceecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECC
Confidence 344 67799999999999999999999999999995 9999999999999999998877665540 001124444445
Q ss_pred hhHHHHHHH
Q 020871 306 LKDLELLLQ 314 (320)
Q Consensus 306 ~~~l~~~l~ 314 (320)
+.+|.++|+
T Consensus 259 ~~el~~~l~ 267 (268)
T 3qgm_A 259 LKDMVEALE 267 (268)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHHh
Confidence 666666543
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=8.2e-19 Score=150.54 Aligned_cols=76 Identities=12% Similarity=0.190 Sum_probs=50.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+..++..+..+++++|+++++|++|||+.||++|++.||+.+++-| +..+....++++.++..+ +.+...|++
T Consensus 194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~n---a~~~~k~~A~~v~~~~~e---~Gv~~~i~~ 267 (279)
T 3mpo_A 194 RRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGN---AIDEVKEAAQAVTLTNAE---NGVAAAIRK 267 (279)
T ss_dssp SSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC------CCHHHHHCSCBC---------CHHHHHC-
T ss_pred CCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccC---CCHHHHHhcceeccCCCc---cHHHHHHHH
Confidence 44558899999999999999999999999999999999998766543 344444567777765443 445566655
Q ss_pred hh
Q 020871 316 VV 317 (320)
Q Consensus 316 ~~ 317 (320)
++
T Consensus 268 ~~ 269 (279)
T 3mpo_A 268 YA 269 (279)
T ss_dssp --
T ss_pred Hh
Confidence 43
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-17 Score=142.62 Aligned_cols=110 Identities=10% Similarity=0.046 Sum_probs=76.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC------CCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhH
Q 020871 195 GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD------DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGL 268 (320)
Q Consensus 195 g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~------~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv 268 (320)
++...+++ ..........+.+ + .. |+.+.++. -...+++++..+..+++++|+++++|++|||+.||+
T Consensus 156 ~~~ki~~~-~~~~~~~~~~~~l-~--~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi 229 (274)
T 3fzq_A 156 DIHKICLW-SNEKVFDEVKDIL-Q--DK--MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDI 229 (274)
T ss_dssp CCCEEEEE-CCHHHHHHHHHHH-G--GG--EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGH
T ss_pred CeEEEEEE-cCHHHHHHHHHHh-h--cc--eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHH
Confidence 34333444 4555555555554 3 22 34444443 356788999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHh
Q 020871 269 QAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 269 ~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
+|++.||+.+++ ++...+....+++++++..+ +.+...|+++
T Consensus 230 ~m~~~ag~~vam---~na~~~~k~~A~~v~~~~~e---dGv~~~l~~~ 271 (274)
T 3fzq_A 230 VMFQASDVTIAM---KNSHQQLKDIATSICEDIFD---NGIYKELKRR 271 (274)
T ss_dssp HHHHTCSEEEEE---TTSCHHHHHHCSEEECCGGG---THHHHHHHHT
T ss_pred HHHHhcCceEEe---cCccHHHHHhhhheeCCCch---hHHHHHHHHh
Confidence 999999977665 44555555678888876554 4555666543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-17 Score=143.60 Aligned_cols=113 Identities=9% Similarity=-0.005 Sum_probs=75.6
Q ss_pred CcEEEEeCCchhhHHHHHHHhh-CCcc-ccCcceEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHH
Q 020871 196 KKVAVCSAATKSSVILCLENLI-GMER-FEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQ 269 (320)
Q Consensus 196 ~~i~i~Tn~~~~~~~~~l~~~~-~l~~-~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~ 269 (320)
+++.+.+ . ........+.+. .+.. . ++.+.++.. ...+.+++..+..+++++|+++++|++|||+.||++
T Consensus 183 ~ki~~~~-~-~~~~~~~~~~l~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~ 258 (304)
T 3l7y_A 183 FKLTLQV-K-EEESAQIMKAIADYKTSQR--LVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIE 258 (304)
T ss_dssp EEEEEEC-C-GGGHHHHHHHHHTSTTTTT--EEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred EEEEEEc-C-HHHHHHHHHHHHHhcCCCe--EEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHH
Confidence 3444444 3 333455555542 2332 2 455554432 345677888999999999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhhh
Q 020871 270 AATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 318 (320)
Q Consensus 270 ~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~ 318 (320)
|++.||+.+++ +++..+....+++++++..+ +.+...|++++.
T Consensus 259 m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~e---dGv~~~l~~~~~ 301 (304)
T 3l7y_A 259 MLKLAKYSYAM---ANAPKNVKAAANYQAKSNDE---SGVLDVIDNYLA 301 (304)
T ss_dssp HHHHCTEEEEC---TTSCHHHHHHCSEECCCGGG---THHHHHHHHHHH
T ss_pred HHHhcCCeEEc---CCcCHHHHHhccEEcCCCCc---chHHHHHHHHHH
Confidence 99999977665 45555555677888775443 346666666553
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-16 Score=123.78 Aligned_cols=110 Identities=14% Similarity=0.106 Sum_probs=82.6
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHh-hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENL-IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV 265 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~-~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~ 265 (320)
.|+.|+++|++++++||. ..+...++++ +++. + +.+ .+++++.+..+++++|++|++|+||||+.
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~------~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~ 109 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T------EVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEV 109 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E------ECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E------EEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCH
Confidence 688999999999999998 5577777743 1443 2 222 36788999999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC-hhHHHHHH
Q 020871 266 IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL 313 (320)
Q Consensus 266 ~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~l 313 (320)
||+.+++.+|+.+++ +.........++++.++-.+.- +.++.+.+
T Consensus 110 nDi~~~~~ag~~~a~---~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~i 155 (168)
T 3ewi_A 110 SDEECLKRVGLSAVP---ADACSGAQKAVGYICKCSGGRGAIREFAEHI 155 (168)
T ss_dssp GGHHHHHHSSEEEEC---TTCCHHHHTTCSEECSSCTTTTHHHHHHHHH
T ss_pred hHHHHHHHCCCEEEe---CChhHHHHHhCCEEeCCCCCccHHHHHHHHH
Confidence 999999999999664 2333444457788877655543 45555444
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-17 Score=141.73 Aligned_cols=117 Identities=14% Similarity=0.080 Sum_probs=80.2
Q ss_pred HHHCCCcEEEEeCCchhhHHHHHHHhh-CCccccCcceEEeCC----CCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH
Q 020871 191 AKAAGKKVAVCSAATKSSVILCLENLI-GMERFEGLDCFLAGD----DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV 265 (320)
Q Consensus 191 L~~~g~~i~i~Tn~~~~~~~~~l~~~~-~l~~~~~fd~v~~~~----~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~ 265 (320)
+++.++++.++++... ....++.+. .+... |+.+.++. -+..+++++..+..+++++|+++++|++|||+.
T Consensus 142 ~~~~~~ki~i~~~~~~--~~~~~~~l~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~ 217 (271)
T 1rlm_A 142 IDDVLFKFSLNLPDEQ--IPLVIDKLHVALDGI--MKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSG 217 (271)
T ss_dssp CCSCEEEEEEECCGGG--HHHHHHHHHHHTTTS--SEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred CCCceEEEEEEcCHHH--HHHHHHHHHHHcCCc--EEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcH
Confidence 3445677888876533 444444431 13443 56665552 245788999999999999999999999999999
Q ss_pred hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhh
Q 020871 266 IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 266 ~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
||+.|++.+|+.+++ ++...+....+++++++..+ +.+...|++++
T Consensus 218 nD~~m~~~ag~~va~---~na~~~~k~~a~~v~~~~~~---dGVa~~l~~~~ 263 (271)
T 1rlm_A 218 NDAEMLKMARYSFAM---GNAAENIKQIARYATDDNNH---EGALNVIQAVL 263 (271)
T ss_dssp GGHHHHHHCSEEEEC---TTCCHHHHHHCSEECCCGGG---THHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEe---CCccHHHHHhCCeeCcCCCC---ChHHHHHHHHH
Confidence 999999999997553 23333333467777766544 35566666554
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-16 Score=134.66 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=58.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+-.+...+..+++++|+++++|++|||+.||++|++.+|+.+++ ++...+....++++.++..+ +.+...+++
T Consensus 180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam---~na~~~~k~~A~~v~~~~~~---dGva~~i~~ 253 (258)
T 2pq0_A 180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM---GNAHEEVKRVADFVTKPVDK---EGIWYGLKQ 253 (258)
T ss_dssp SSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE---TTCCHHHHHTCSEEECCGGG---THHHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe---CCCcHHHHHhCCEEeCCCCc---chHHHHHHH
Confidence 445667789999999999999999999999999999999998776 33444444567888776544 456666665
Q ss_pred h
Q 020871 316 V 316 (320)
Q Consensus 316 ~ 316 (320)
+
T Consensus 254 ~ 254 (258)
T 2pq0_A 254 L 254 (258)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-16 Score=134.72 Aligned_cols=77 Identities=12% Similarity=0.069 Sum_probs=60.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
...+.+++..+..+++++|+++++|++|||+.||++|++.+|+.+++ +++.++....++++.++..+ +.+...|
T Consensus 189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~e---dGv~~~l 262 (268)
T 3r4c_A 189 NVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM---GNASEKVQSVADFVTDTVDN---SGLYKAL 262 (268)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHTCSEECCCTTT---THHHHHH
T ss_pred eeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe---CCCcHHHHHhcCEeeCCCCc---CHHHHHH
Confidence 44567788999999999999999999999999999999999987665 44455555678888776443 4566666
Q ss_pred HHh
Q 020871 314 QNV 316 (320)
Q Consensus 314 ~~~ 316 (320)
+++
T Consensus 263 ~~~ 265 (268)
T 3r4c_A 263 KHF 265 (268)
T ss_dssp HHT
T ss_pred HHh
Confidence 553
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.65 E-value=6.6e-17 Score=137.34 Aligned_cols=77 Identities=8% Similarity=0.105 Sum_probs=58.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+..++|++..+..+++++|+++++|++|||+.||+.|++.+|+.+++ ++...+....+++++++..+ +.+..++
T Consensus 182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~~---dGv~~~l 255 (261)
T 2rbk_A 182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADYVTAPIDE---DGISKAM 255 (261)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCGGG---THHHHHH
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe---cCccHHHHhhCCEEeccCch---hhHHHHH
Confidence 46788999999999999999999999999999999999999997655 33333333456666655433 2266666
Q ss_pred HHh
Q 020871 314 QNV 316 (320)
Q Consensus 314 ~~~ 316 (320)
+++
T Consensus 256 ~~~ 258 (261)
T 2rbk_A 256 KHF 258 (261)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.65 E-value=7.1e-16 Score=130.09 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=87.3
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCc---hhhHHHHHHHhhCCc--cccCcceEEeCCCCCCCCCCHHHHHHHHHHc
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGME--RFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL 251 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~---~~~~~~~l~~~~~l~--~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l 251 (320)
...++||+.++|+.|++.|++++++||.. .......++.+ |+. .+ |+.++++++. .||.+ ...++ ..
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~-Gl~~v~~--~~vi~~~~~~--~K~~~--~~~~~-~~ 170 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERV-GAPQATK--EHILLQDPKE--KGKEK--RRELV-SQ 170 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHH-TCSSCST--TTEEEECTTC--CSSHH--HHHHH-HH
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHc-CCCcCCC--ceEEECCCCC--CCcHH--HHHHH-Hh
Confidence 45799999999999999999999999988 44566677776 887 55 7777776643 45554 33333 33
Q ss_pred CCCCCCEEEEecCHhhHHHHH-------H---------cCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 252 GISEKDCLVVEDSVIGLQAAT-------R---------AGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 252 ~~~~~~~v~VGD~~~Dv~~a~-------~---------aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
+. +.|+||||+.+|+.+|. + +|+.++.++++.-..++ . .+..+...++.++=.++-.+
T Consensus 171 ~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~--~--~~~~~~~~~~~~~~~~~~~~ 244 (258)
T 2i33_A 171 TH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWE--G--ALYDYNFKKSDAEKDKIRHD 244 (258)
T ss_dssp HE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHH--H--HHTTTCTTSCHHHHHHHHHH
T ss_pred CC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhh--h--hhcCCCCCCCHHHHHHHHHH
Confidence 43 34999999999999982 4 89999999887554332 1 22344445555554444443
Q ss_pred h
Q 020871 316 V 316 (320)
Q Consensus 316 ~ 316 (320)
.
T Consensus 245 ~ 245 (258)
T 2i33_A 245 N 245 (258)
T ss_dssp T
T ss_pred H
Confidence 3
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.6e-17 Score=139.63 Aligned_cols=117 Identities=10% Similarity=0.124 Sum_probs=74.5
Q ss_pred HCCCcEEEEeCCchhhHHHHHHHhhC-CccccCcceEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhh
Q 020871 193 AAGKKVAVCSAATKSSVILCLENLIG-MERFEGLDCFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 267 (320)
Q Consensus 193 ~~g~~i~i~Tn~~~~~~~~~l~~~~~-l~~~~~fd~v~~~~~----~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~D 267 (320)
..++...++++.+........+.+.. +... +..++++.. ...+.+++..+..+++++|++++++++|||+.||
T Consensus 160 ~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~ND 237 (285)
T 3pgv_A 160 PQGISKVFFTCEDHEHLLPLEQAMNARWGDR--VNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMND 237 (285)
T ss_dssp CSSEEEEEEECSCHHHHHHHHHHHHHHHGGG--EEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred CCCceEEEEeCCCHHHHHHHHHHHHHHhcCC--EEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhh
Confidence 34455556665554444444333210 1121 344443322 3456778899999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEeCCCCchhhccccce--ecccccccChhHHHHHHHHhh
Q 020871 268 LQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 268 v~~a~~aG~~~v~v~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~l~~~~ 317 (320)
++|++.+|+.+++ +++..+....+++ ++++. +-+.+...|++++
T Consensus 238 i~ml~~ag~~vAm---~Na~~~vk~~A~~~~v~~sn---~edGva~~i~~~~ 283 (285)
T 3pgv_A 238 AEMLSMAGKGCIM---ANAHQRLKDLHPELEVIGSN---ADDAVPRYLRKLY 283 (285)
T ss_dssp HHHHHHSSEEEEC---TTSCHHHHHHCTTSEECCCG---GGTHHHHHHHHHH
T ss_pred HHHHHhcCCEEEc---cCCCHHHHHhCCCCEecccC---CcchHHHHHHHHh
Confidence 9999999977665 4455454455553 44443 3456667776654
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-14 Score=124.83 Aligned_cols=101 Identities=15% Similarity=0.094 Sum_probs=86.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhh---HHHHHHH--------hhCCccccCcceEEeCCCCCCCCCCHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLEN--------LIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~---~~~~l~~--------~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~ 246 (320)
..++||+.++|+.|+++|++++++||..... ....++. + |+ . |+.++++++. ..||+|+++..
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~-~~--~--~~~~~~~~~~-~~kp~p~~~~~ 260 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIA-GV--P--LVMQCQREQG-DTRKDDVVKEE 260 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTT-CC--C--CSEEEECCTT-CCSCHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhccccccccc-CC--C--chheeeccCC-CCcHHHHHHHH
Confidence 4679999999999999999999999998543 3455655 5 77 3 6888887665 46999999999
Q ss_pred HHHHcCCCCCC-EEEEecCHhhHHHHHHcCCeEEEEeCC
Q 020871 247 AAKRLGISEKD-CLVVEDSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 247 ~~~~l~~~~~~-~v~VGD~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
++++++.++.+ |+||||+..|+++|+++|+.+++|.+|
T Consensus 261 ~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 261 IFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 99999887644 799999999999999999999999887
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.52 E-value=6.7e-14 Score=116.16 Aligned_cols=76 Identities=5% Similarity=-0.050 Sum_probs=56.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+.+++..+..+++++|++++++++|||+.||++|++.+|+.+++ ++...+....+++++.+.. .+.+.+.+++
T Consensus 150 ~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~---~n~~~~~k~~a~~v~~~~~---~~Gv~~~l~~ 223 (227)
T 1l6r_A 150 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP---ANATDNIKAVSDFVSDYSY---GEEIGQIFKH 223 (227)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC---TTSCHHHHHHCSEECSCCT---THHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEe---cCchHHHHHhCCEEecCCC---CcHHHHHHHH
Confidence 446778899999999999999999999999999999999997543 2333333345666665533 3566777766
Q ss_pred hh
Q 020871 316 VV 317 (320)
Q Consensus 316 ~~ 317 (320)
++
T Consensus 224 ~~ 225 (227)
T 1l6r_A 224 FE 225 (227)
T ss_dssp TT
T ss_pred Hh
Confidence 54
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.51 E-value=3.6e-14 Score=122.20 Aligned_cols=75 Identities=17% Similarity=0.115 Sum_probs=55.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+-.+...+..+++++|+++++|++|||+.||++|++.+|+.+ .+.+ ...+....+++++++..+ +.+...|++
T Consensus 213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~~--~~~~~~~~a~~v~~~~~~---dGVa~~i~~ 286 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGV-AMGN--AREDIKSIADAVTLTNDE---HGVAHMMKH 286 (288)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEE-ECTT--CCHHHHHHCSEECCCGGG---THHHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEE-EEcC--CCHHHHhhCceeecCCCc---ChHHHHHHH
Confidence 4456778899999999999999999999999999999999954 4433 333333456777765443 456666665
Q ss_pred h
Q 020871 316 V 316 (320)
Q Consensus 316 ~ 316 (320)
+
T Consensus 287 ~ 287 (288)
T 1nrw_A 287 L 287 (288)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-13 Score=116.30 Aligned_cols=77 Identities=10% Similarity=0.102 Sum_probs=57.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
..+.+++..+..+++++|+++++|++|||+.||++|++.+|+.+++ ++...+....+++++.+.. .+.+..+|+
T Consensus 186 ~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~---~dGv~~~i~ 259 (268)
T 1nf2_A 186 PKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM---ENAIEKVKEASDIVTLTNN---DSGVSYVLE 259 (268)
T ss_dssp CTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC---TTSCHHHHHHCSEECCCTT---TTHHHHHHT
T ss_pred CCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe---cCCCHHHHhhCCEEEccCC---cchHHHHHH
Confidence 4566778899999999999999999999999999999999996554 3333333345666665433 356777777
Q ss_pred Hhh
Q 020871 315 NVV 317 (320)
Q Consensus 315 ~~~ 317 (320)
+++
T Consensus 260 ~~~ 262 (268)
T 1nf2_A 260 RIS 262 (268)
T ss_dssp TBC
T ss_pred HHH
Confidence 654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.45 E-value=8.2e-14 Score=119.57 Aligned_cols=77 Identities=12% Similarity=0.104 Sum_probs=56.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
..+-+++..+..+++++|+++++|++|||+.||++|++.+|+.++ + ++...+....+++++++.. .+.+..+|+
T Consensus 194 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~--~n~~~~~~~~a~~v~~~~~---~dGV~~~l~ 267 (282)
T 1rkq_A 194 DKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA-V--DNAIPSVKEVANFVTKSNL---EDGVAFAIE 267 (282)
T ss_dssp ETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-C--TTSCHHHHHHCSEECCCTT---TTHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEE-e--cCCcHHHHhhCCEEecCCC---cchHHHHHH
Confidence 455677889999999999999999999999999999999998644 3 2333333345666665433 345666666
Q ss_pred Hhh
Q 020871 315 NVV 317 (320)
Q Consensus 315 ~~~ 317 (320)
+++
T Consensus 268 ~~~ 270 (282)
T 1rkq_A 268 KYV 270 (282)
T ss_dssp HHT
T ss_pred HHH
Confidence 654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=4.5e-14 Score=124.12 Aligned_cols=79 Identities=20% Similarity=0.106 Sum_probs=57.4
Q ss_pred CCCCCCCHHHHHHHHHHc----------------------CC-----CCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCC
Q 020871 234 VKQKKPDPSIYVTAAKRL----------------------GI-----SEKDCLVVEDSV-IGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l----------------------~~-----~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~ 285 (320)
+..+||++.+|+.+.+.+ |+ ++++|+||||+. +|+.+|+++||.+++|.++.
T Consensus 242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~ 321 (352)
T 3kc2_A 242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV 321 (352)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence 346899999999987764 22 679999999999 59999999999999999987
Q ss_pred CchhhccccceecccccccChhHHHHHHH
Q 020871 286 TAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 286 ~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
...+.. .....|++..-++.+|.+++.
T Consensus 322 ~~~~~~--~~~~~pd~vi~~l~el~~~il 348 (352)
T 3kc2_A 322 YNEGDD--LKECKPTLIVNDVFDAVTKTL 348 (352)
T ss_dssp CCTTCC--CTTCCCSEECSSHHHHHHHHH
T ss_pred CCcccc--cccCCCCEEECCHHHHHHHHH
Confidence 654331 112334554445666665554
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-13 Score=120.64 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=77.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC-CC-------------------CCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD-DV-------------------KQKK 238 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~-~~-------------------~~~K 238 (320)
.+.+++.++++.|++ |++++++|+..........+.+ ++. +.+.+.. +. ...+
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 175 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMI-GVR-----GELHGTEVDFDSIAVPEGLREELLSIIDVIASL 175 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT-TCC-----SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhh-hhh-----hhhcccccchhhhccccccceeEEecCHHHHhh
Confidence 578999999999999 9999999988766565555554 542 2221110 00 0001
Q ss_pred CC---------------HHHHH------------HHHHHcCCCCCC----EEEEecCHhhHHHHHHc----CCeEEEEeC
Q 020871 239 PD---------------PSIYV------------TAAKRLGISEKD----CLVVEDSVIGLQAATRA----GMACVITYT 283 (320)
Q Consensus 239 P~---------------~~~~~------------~~~~~l~~~~~~----~v~VGD~~~Dv~~a~~a----G~~~v~v~~ 283 (320)
+. |..+. .+++ |+++++ |++|||+.||++|++.| |+.+++ +.
T Consensus 176 ~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~--gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na 252 (332)
T 1y8a_A 176 SGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR--GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG 252 (332)
T ss_dssp CHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH--HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC
T ss_pred hhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh--ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC
Confidence 11 11222 1222 677888 99999999999999999 998766 42
Q ss_pred CCCchhhccccceecccccccChhHHHHHHHHhh
Q 020871 284 SSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 284 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
.......+++++.+. +.+.+..+|++++
T Consensus 253 ---~~~lk~~Ad~v~~~~---~~dGV~~~l~~~~ 280 (332)
T 1y8a_A 253 ---NEYALKHADVVIISP---TAMSEAKVIELFM 280 (332)
T ss_dssp ---CHHHHTTCSEEEECS---STHHHHHHHHHHH
T ss_pred ---CHHHHhhCcEEecCC---CCCHHHHHHHHHH
Confidence 223334677776543 3455666666544
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=8.2e-14 Score=118.02 Aligned_cols=76 Identities=9% Similarity=0.028 Sum_probs=57.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCC--CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISE--KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 311 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~--~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 311 (320)
... ++++..+..+++++|+++ ++|++|||+.||+.|++.+|+.+++-|... + .+.++.++. ....+.+
T Consensus 172 ~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-----~-~~~~~~~~~---~~~gv~~ 241 (259)
T 3zx4_A 172 AKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-----P-EGVLATPAP---GPEGFRY 241 (259)
T ss_dssp ESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-----C-TTCEECSSC---HHHHHHH
T ss_pred cCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-----c-CCcEEeCCC---CchHHHH
Confidence 344 788999999999999999 999999999999999999999866543322 3 344554443 2355777
Q ss_pred HHHHhhhc
Q 020871 312 LLQNVVAA 319 (320)
Q Consensus 312 ~l~~~~~~ 319 (320)
.+++++.+
T Consensus 242 ~~~~~~~~ 249 (259)
T 3zx4_A 242 AVERYLLP 249 (259)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHh
Confidence 77776654
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.36 E-value=8.3e-13 Score=114.29 Aligned_cols=79 Identities=16% Similarity=0.128 Sum_probs=58.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecc-cccccChhHHHHHH
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP-DLSNVRLKDLELLL 313 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~~l 313 (320)
..+-+++..+..+++++|+++++|++|||+.||+.|++.+|+.++ +.+ ...+....+++++. +.. .+.+...|
T Consensus 220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~n--a~~~~k~~a~~v~~~~~~---~dGVa~~l 293 (301)
T 2b30_A 220 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VAN--ATDSAKSHAKCVLPVSHR---EGAVAYLL 293 (301)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTT--CCHHHHHHSSEECSSCTT---TTHHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-EcC--CcHHHHhhCCEEEccCCC---CcHHHHHH
Confidence 455678889999999999999999999999999999999999754 332 33333345666665 433 34577777
Q ss_pred HHhhhc
Q 020871 314 QNVVAA 319 (320)
Q Consensus 314 ~~~~~~ 319 (320)
++++..
T Consensus 294 ~~~~~~ 299 (301)
T 2b30_A 294 KKVFDL 299 (301)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 776654
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.3e-11 Score=100.45 Aligned_cols=129 Identities=14% Similarity=0.208 Sum_probs=83.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCch----hhHHHHHHHhhCCccccCcc-eEEeCCCCCCCCCCHHHHHHHHHH
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATK----SSVILCLENLIGMERFEGLD-CFLAGDDVKQKKPDPSIYVTAAKR 250 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~----~~~~~~l~~~~~l~~~~~fd-~v~~~~~~~~~KP~~~~~~~~~~~ 250 (320)
+...++||+.++|+.|++.|++++++||... ......|+.+ |+..+ ++ .++...+ ++........+..
T Consensus 98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~l-Gi~~~--~~~~Lilr~~----~~~K~~~r~~L~~ 170 (260)
T 3pct_A 98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRL-GFTGV--NDKTLLLKKD----KSNKSVRFKQVED 170 (260)
T ss_dssp TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHH-TCCCC--STTTEEEESS----CSSSHHHHHHHHT
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHc-CcCcc--ccceeEecCC----CCChHHHHHHHHh
Confidence 4468999999999999999999999999865 4777788887 99876 43 3443322 2333344444444
Q ss_pred cCCCCCCEEEEecCHhhHHH--------HHH---------cCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 251 LGISEKDCLVVEDSVIGLQA--------ATR---------AGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 251 l~~~~~~~v~VGD~~~Dv~~--------a~~---------aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
.|. .-+++|||+.+|+.+ +++ -|-..+++++|.--. ++. .+..+...++.++=.++-
T Consensus 171 ~gy--~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~YG~--we~--~~~~~~~~~~~~~~~~~r 244 (260)
T 3pct_A 171 MGY--DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQYGD--WEG--GLDKNYFKGDSQSKLDVR 244 (260)
T ss_dssp TTC--EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCCSCSH--HHH--TTCTTTTTSCHHHHHHHH
T ss_pred cCC--CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCcch--hhH--HhcCCCCCCCHHHHHHHH
Confidence 454 449999999999998 333 566677765553222 222 233444455655555554
Q ss_pred HHhh
Q 020871 314 QNVV 317 (320)
Q Consensus 314 ~~~~ 317 (320)
.+.+
T Consensus 245 ~~~~ 248 (260)
T 3pct_A 245 AKAI 248 (260)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 4443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.28 E-value=5.7e-11 Score=99.15 Aligned_cols=86 Identities=19% Similarity=0.269 Sum_probs=63.3
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCch----hhHHHHHHHhhCCccccCcc-eEEeCCCCCCCCCCHHHHHHHHHH
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATK----SSVILCLENLIGMERFEGLD-CFLAGDDVKQKKPDPSIYVTAAKR 250 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~----~~~~~~l~~~~~l~~~~~fd-~v~~~~~~~~~KP~~~~~~~~~~~ 250 (320)
....++||+.++|+.|++.|++++++||... ......|+.+ |+..+ ++ .++...+ ...+...+..+.+.
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~l-Gi~~~--~~~~Lilr~~---~~~K~~~r~~l~~~ 171 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRL-GFNGV--EESAFYLKKD---KSAKAARFAEIEKQ 171 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHH-TCSCC--SGGGEEEESS---CSCCHHHHHHHHHT
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHc-CcCcc--cccceeccCC---CCChHHHHHHHHhc
Confidence 4468999999999999999999999998865 4777788887 99876 42 4444322 12334455555544
Q ss_pred cCCCCCCEEEEecCHhhHHH
Q 020871 251 LGISEKDCLVVEDSVIGLQA 270 (320)
Q Consensus 251 l~~~~~~~v~VGD~~~Dv~~ 270 (320)
|. ..+++|||+.+|+.+
T Consensus 172 -Gy--~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 172 -GY--EIVLYVGDNLDDFGN 188 (262)
T ss_dssp -TE--EEEEEEESSGGGGCS
T ss_pred -CC--CEEEEECCChHHhcc
Confidence 44 349999999999998
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.5e-12 Score=104.96 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=86.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
+.++||+.++|+.|++. ++++|+|++.+..++.+++.+ ++..+ |+.+++++++...| ..|...++.+|.++++
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~l-d~~~~--f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~ 139 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLL-DRWGV--FRARLFRESCVFHR---GNYVKDLSRLGRELSK 139 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH-CCSSC--EEEEECGGGCEEET---TEEECCGGGSSSCGGG
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHh-CCccc--EEEEEEcccceecC---CceeeeHhHhCCChhH
Confidence 46899999999999998 999999999999999999997 88888 99999888876655 4678888999999999
Q ss_pred EEEEecCHhhHHHHHHcCCeEEE
Q 020871 258 CLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
||+|||+..++.++.++|+.++.
T Consensus 140 ~vivDDs~~~~~~~~~ngi~i~~ 162 (195)
T 2hhl_A 140 VIIVDNSPASYIFHPENAVPVQS 162 (195)
T ss_dssp EEEEESCGGGGTTCGGGEEECCC
T ss_pred EEEEECCHHHhhhCccCccEEee
Confidence 99999999999999999988643
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.7e-10 Score=94.58 Aligned_cols=76 Identities=8% Similarity=0.003 Sum_probs=54.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccc-------cceecccccccChh
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD-------AIAIYPDLSNVRLK 307 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~-------~~~~~~~~~~~~~~ 307 (320)
..+-+++..+..+++++|++++++++|||+.||+.|++.+|+.+++ ++...+.... ++++.++..+ +
T Consensus 158 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~---~na~~~~k~~a~~~~~~a~~v~~~~~~---d 231 (244)
T 1s2o_A 158 PQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV---RNAQPELLHWYDQWGDSRHYRAQSSHA---G 231 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC---TTCCHHHHHHHHHHCCTTEEECSSCHH---H
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE---cCCcHHHHHHHhcccccceeecCCcch---h
Confidence 4566888899999999999999999999999999999999987544 3333222222 5566655433 4
Q ss_pred HHHHHHHHh
Q 020871 308 DLELLLQNV 316 (320)
Q Consensus 308 ~l~~~l~~~ 316 (320)
.+...++++
T Consensus 232 Gva~~i~~~ 240 (244)
T 1s2o_A 232 AILEAIAHF 240 (244)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 555666543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.13 E-value=2.4e-11 Score=102.14 Aligned_cols=44 Identities=7% Similarity=-0.036 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHcCC-CCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 237 KKPDPSIYVTAAKRLGI-SEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 237 ~KP~~~~~~~~~~~l~~-~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
+-.+...+..+++++|+ +++++++|||+.||++|++.+|+.+++
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~ 221 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe
Confidence 45667899999999998 999999999999999999999998655
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.11 E-value=3.1e-10 Score=96.75 Aligned_cols=79 Identities=11% Similarity=-0.072 Sum_probs=42.6
Q ss_pred CCCCCCHHHHHHHHHHcC-CCCCC--EEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc---ccc-eecccccccChh
Q 020871 235 KQKKPDPSIYVTAAKRLG-ISEKD--CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK---DAI-AIYPDLSNVRLK 307 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~-~~~~~--~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~---~~~-~~~~~~~~~~~~ 307 (320)
..+.+++..+..+++++| +++++ +++|||+.||+.|++.+|+. +.+.++....+.+. .++ ++.++..+ +
T Consensus 185 ~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~---d 260 (275)
T 1xvi_A 185 DASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGP---E 260 (275)
T ss_dssp ETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC--------------------------
T ss_pred cCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCc---h
Confidence 456678889999999999 99999 99999999999999999997 44444432223332 245 55554333 3
Q ss_pred HHHHHHHHhh
Q 020871 308 DLELLLQNVV 317 (320)
Q Consensus 308 ~l~~~l~~~~ 317 (320)
.+...|++++
T Consensus 261 GVa~~l~~~l 270 (275)
T 1xvi_A 261 GWREGLDHFF 270 (275)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 4555555544
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.10 E-value=4.2e-10 Score=97.05 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=66.4
Q ss_pred hCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeC-----CC-----------CCCCC
Q 020871 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG-----DD-----------VKQKK 238 (320)
Q Consensus 175 ~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~-----~~-----------~~~~K 238 (320)
....++.||+.++++.|+++|++++++|++....++.+++++ |+..- ...+++. ++ ....|
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~-g~~~~--~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k 213 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQA-GVYHS--NVKVVSNFMDFDENGVLKGFKGELIHVFNK 213 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHT-TCCCT--TEEEEEECEEECTTSBEEEECSSCCCTTCH
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHc-CCCcc--cceEEeeeEEEcccceeEeccccccchhhc
Confidence 445789999999999999999999999999999999999987 76532 1222221 11 01122
Q ss_pred CCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHc
Q 020871 239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 274 (320)
Q Consensus 239 P~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~a 274 (320)
+.+..-......+.-...+++||||+.||+.|++.+
T Consensus 214 ~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l 249 (297)
T 4fe3_A 214 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGV 249 (297)
T ss_dssp HHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred ccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence 222221122233444557899999999999997743
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.08 E-value=9.6e-12 Score=99.11 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=83.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.+++. ++++|+|++....++.+++.+ +...+ |+.+++.++....| ..|...++.+|.++++
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~l-d~~~~--f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~ 126 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL-DKWGA--FRARLFRESCVFHR---GNYVKDLSRLGRDLRR 126 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH-CTTCC--EEEEECGGGSEEET---TEEECCGGGTCSCGGG
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHH-CCCCc--EEEEEeccCceecC---CcEeccHHHhCCCcce
Confidence 47899999999999998 999999999999999999997 88887 89998887765444 3577788899999999
Q ss_pred EEEEecCHhhHHHHHHcCCeE
Q 020871 258 CLVVEDSVIGLQAATRAGMAC 278 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~ 278 (320)
||+|||+..++.++..+|+.+
T Consensus 127 ~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 127 VLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEEECSCGGGGTTCTTSBCCC
T ss_pred EEEEeCCHHHhccCcCCEeEe
Confidence 999999999999999999984
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.3e-09 Score=100.70 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=81.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
++.|++.+.++.|++.|++++++|+.+........+++ |++.+ +..+ . +..+ ..+++++... +++
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~l-gi~~~--~~~~-----~--P~~K----~~~v~~l~~~-~~v 521 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV--IAEV-----L--PHQK----SEEVKKLQAK-EVV 521 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSC-----C--TTCH----HHHHHHHTTT-CCE
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCCEE--EEeC-----C--HHhH----HHHHHHHhhC-CeE
Confidence 47899999999999999999999999999999888887 88754 3221 1 2233 3455555544 889
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+||||+.||+.+.+.||+...+- .......+.++.++.+ .++..+..++
T Consensus 522 ~~vGDg~ND~~al~~A~vgiamg---~g~~~a~~~AD~vl~~---~~~~~i~~~i 570 (645)
T 3j08_A 522 AFVGDGINDAPALAQADLGIAVG---SGSDVAVESGDIVLIR---DDLRDVVAAI 570 (645)
T ss_dssp EEEECSSSCHHHHHHSSEEEEEC---CCSCCSSCCSSSEESS---CCTTHHHHHH
T ss_pred EEEeCCHhHHHHHHhCCEEEEeC---CCcHHHHHhCCEEEec---CCHHHHHHHH
Confidence 99999999999999999775543 3333444566766633 2344444444
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=7.9e-09 Score=93.87 Aligned_cols=100 Identities=20% Similarity=0.215 Sum_probs=83.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhC-------------CccccCcceEEeCCCCCCCCCCHHH-
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG-------------MERFEGLDCFLAGDDVKQKKPDPSI- 243 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~-------------l~~~~~fd~v~~~~~~~~~KP~~~~- 243 (320)
+...|++..+|..||+.| ++.++||+....+....+.++| +..+ ||.|+... .||....
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdl--FD~vI~~A----~KP~FF~~ 317 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSY--FDLILVDA----RKPLFFGE 317 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGG--CSEEEESC----CTTGGGTT
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhh--CCEEEEeC----CCCCcccC
Confidence 567789999999999999 9999999999999999988756 3456 89866532 3333222
Q ss_pred ---------------------------------HHHHHHHcCCCCCCEEEEecCH-hhHHHHH-HcCCeEEEEeCC
Q 020871 244 ---------------------------------YVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYTS 284 (320)
Q Consensus 244 ---------------------------------~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~-~aG~~~v~v~~~ 284 (320)
+..+++.+|+.+++++||||.. .||..++ .+||.+++|...
T Consensus 318 ~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 318 GTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp CCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred CCcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 5889999999999999999999 7999997 899999998664
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.8e-08 Score=86.78 Aligned_cols=104 Identities=12% Similarity=-0.034 Sum_probs=67.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCC-----C------CC--CCCCCHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGD-----D------VK--QKKPDPSIYV 245 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~-----~------~~--~~KP~~~~~~ 245 (320)
+++||+.++++.|+++|++++|||++....++.+.+++ |+..-...+.|++.. + +. .+-...+.-.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~l-g~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~ 299 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDT-NNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV 299 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCT-TSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh-CcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence 47999999999999999999999999999999988886 653211123444321 1 00 0112223333
Q ss_pred HHHHHc---CCCCCCEEEEecCHhhHHHHHHcC-Ce-EEEEeC
Q 020871 246 TAAKRL---GISEKDCLVVEDSVIGLQAATRAG-MA-CVITYT 283 (320)
Q Consensus 246 ~~~~~l---~~~~~~~v~VGD~~~Dv~~a~~aG-~~-~v~v~~ 283 (320)
..++++ ......++++|||.+|+.|.+..+ .. .+.+|+
T Consensus 300 ~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liinr 342 (385)
T 4gxt_A 300 QTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR 342 (385)
T ss_dssp HHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred HHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence 333332 233456899999999999999843 33 344554
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1e-06 Score=76.37 Aligned_cols=38 Identities=24% Similarity=0.187 Sum_probs=35.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~ 216 (320)
.++|++.++++.|+++|++++|||.+....++.+.+..
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 58999999999999999999999999999888887764
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.44 E-value=8.6e-07 Score=85.10 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=79.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
++.|++.+.++.|++.|++++++|+.+......+.+++ |++.+ +.. -.|+-...+++.+.-..+.+
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~l-gi~~v--~a~-----------~~P~~K~~~v~~l~~~g~~V 619 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTL-GIKKV--VAE-----------IMPEDKSRIVSELKDKGLIV 619 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHH-TCCCE--ECS-----------CCHHHHHHHHHHHHHHSCCE
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCEE--EEe-----------cCHHHHHHHHHHHHhcCCEE
Confidence 57799999999999999999999999999898888887 88654 221 12344455555555456789
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
+||||+.||+.+.+.||+...+- .......+.++.++.+
T Consensus 620 ~~vGDG~ND~paL~~AdvGIAmg---~g~d~a~~~AD~vl~~ 658 (736)
T 3rfu_A 620 AMAGDGVNDAPALAKADIGIAMG---TGTDVAIESAGVTLLH 658 (736)
T ss_dssp EEEECSSTTHHHHHHSSEEEEES---SSCSHHHHHCSEEECS
T ss_pred EEEECChHhHHHHHhCCEEEEeC---CccHHHHHhCCEEEcc
Confidence 99999999999999999886553 3333444567777644
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.41 E-value=6e-09 Score=83.82 Aligned_cols=95 Identities=11% Similarity=0.094 Sum_probs=73.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc-cccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~-~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
+...||+.++|+.+. .+++++|.|++....++.+++.+ +.. .+ |+.++..+..... + ..|...++.+|.+++
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~L-Dp~~~~--f~~rl~R~~c~~~-~--g~y~KdL~~Lgrdl~ 130 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKL-DPIHAF--VSYNLFKEHCVYK-D--GVHIKDLSKLNRDLS 130 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHT-STTCSS--EEEEECGGGSEEE-T--TEEECCGGGSCSCGG
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHh-CCCCCe--EEEEEEecceeEE-C--CeeeecHHHhCCChH
Confidence 468999999999998 67999999999999999999997 765 46 7776665443221 1 124556778899999
Q ss_pred CEEEEecCHhhHHHHHHcCCeEE
Q 020871 257 DCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
+||+|+|++.-+......|+.+.
T Consensus 131 ~vIiIDDsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 131 KVIIIDTDPNSYKLQPENAIPME 153 (204)
T ss_dssp GEEEEESCTTTTTTCGGGEEECC
T ss_pred HEEEEECCHHHHhhCccCceEee
Confidence 99999999987766666665543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.38 E-value=1.8e-07 Score=77.79 Aligned_cols=69 Identities=7% Similarity=0.007 Sum_probs=49.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHc--CCeEEEEeCCCCchhhccccceecccccccChhHHHHH
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA--GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 312 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~a--G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~ 312 (320)
..+-.+...++.+++++| +++|||+.||+.|.+.+ |..+++-|. .+.+++++++. .....+.++
T Consensus 156 ~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~Na-------~~~A~~v~~~~--~~~~gV~~~ 221 (239)
T 1u02_A 156 VPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGEG-------ETHAKFHVADY--IEMRKILKF 221 (239)
T ss_dssp CTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESSS-------CCCCSEEESSH--HHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECCC-------CCcceEEeCCC--CCHHHHHHH
Confidence 344566789999999998 99999999999999999 988776443 13455655541 124566677
Q ss_pred HHHhh
Q 020871 313 LQNVV 317 (320)
Q Consensus 313 l~~~~ 317 (320)
|++++
T Consensus 222 l~~~~ 226 (239)
T 1u02_A 222 IEMLG 226 (239)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.9e-06 Score=82.93 Aligned_cols=114 Identities=14% Similarity=0.150 Sum_probs=81.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
++.|++.+.++.|++.|++++++|+.+........+.+ |++.+ +..+ . +..+ ..+++.+.-. +++
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~l-gi~~~--~~~~-----~--P~~K----~~~v~~l~~~-~~v 599 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV--IAEV-----L--PHQK----SEEVKKLQAK-EVV 599 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSC-----C--TTCH----HHHHHHHTTT-CCE
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCcEE--EccC-----C--HHHH----HHHHHHHhcC-CeE
Confidence 57899999999999999999999999999898888887 87654 2211 1 2222 3445555544 889
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 259 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
+||||+.||+.+.+.||+...+ +.......+.++.++.+- ++..+..++
T Consensus 600 ~~vGDg~ND~~al~~A~vgiam---g~g~~~a~~~AD~vl~~~---~~~~i~~~i 648 (723)
T 3j09_A 600 AFVGDGINDAPALAQADLGIAV---GSGSDVAVESGDIVLIRD---DLRDVVAAI 648 (723)
T ss_dssp EEEECSSTTHHHHHHSSEEEEC---CCCSCCSSCCSSEECSSC---CTTHHHHHH
T ss_pred EEEECChhhHHHHhhCCEEEEe---CCCcHHHHHhCCEEEeCC---CHHHHHHHH
Confidence 9999999999999999976544 333334445677776432 344444443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.31 E-value=9.7e-07 Score=88.06 Aligned_cols=116 Identities=16% Similarity=0.185 Sum_probs=79.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC--cceEEeCCCCCC------------------CC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG--LDCFLAGDDVKQ------------------KK 238 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~--fd~v~~~~~~~~------------------~K 238 (320)
++.|++.+.++.|++.|++++++|+.+......+.+++ |+..... .+.++.+++... -.
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~l-gi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI-GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH-TSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc-CcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 57899999999999999999999999999898888887 8864310 012333322111 11
Q ss_pred CCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 239 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 239 P~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
|+ -...+++.+.-..+.++|+||+.||+.|.+.|++...+ . .........++.++.+
T Consensus 682 P~--~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam-g--~g~~~ak~aAd~vl~~ 738 (995)
T 3ar4_A 682 PS--HKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM-G--SGTAVAKTASEMVLAD 738 (995)
T ss_dssp SS--HHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE-T--TSCHHHHHTCSEEETT
T ss_pred HH--HHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe-C--CCCHHHHHhCCEEECC
Confidence 22 33444455444457899999999999999999998665 2 3333333456666643
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.6e-07 Score=82.63 Aligned_cols=81 Identities=15% Similarity=0.200 Sum_probs=63.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc-ccCcc-eEEeCCCCCCCCCCHHHHHHHHHHc-CCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLD-CFLAGDDVKQKKPDPSIYVTAAKRL-GIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~-~~~fd-~v~~~~~~~~~KP~~~~~~~~~~~l-~~~ 254 (320)
+.+.||+.++|+.+. .++.++|+|++....+..+++.+ +... + |+ .+++.++.+. .|..-++.+ |.+
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~L-Dp~~~~--f~~ri~sr~~~g~------~~~KdL~~L~~~d 143 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII-DPTGKL--FQDRVLSRDDSGS------LAQKSLRRLFPCD 143 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHH-CTTSCS--SSSCEECTTTSSC------SSCCCGGGTCSSC
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHh-ccCCce--eeeEEEEecCCCC------cceecHHHhcCCC
Confidence 578999999999999 66999999999999999999987 7665 6 66 5555555432 222335554 899
Q ss_pred CCCEEEEecCHhhH
Q 020871 255 EKDCLVVEDSVIGL 268 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv 268 (320)
+++||+|+|++.-.
T Consensus 144 l~~viiiDd~~~~~ 157 (372)
T 3ef0_A 144 TSMVVVIDDRGDVW 157 (372)
T ss_dssp CTTEEEEESCSGGG
T ss_pred CceEEEEeCCHHHc
Confidence 99999999999543
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1e-05 Score=72.78 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=80.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhh--------CCccccCcceEEeCCCCCCCCCC---------
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--------GMERFEGLDCFLAGDDVKQKKPD--------- 240 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~--------~l~~~~~fd~v~~~~~~~~~KP~--------- 240 (320)
+...|++..+|..||++|.++.++||+....+...+..+. .+..+ ||.|++... ||.
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdl--FDvVIv~A~----KP~FF~~~~~~~ 258 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGL--FEFVITLAN----KPRFFYDNLRFL 258 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGG--CSEEEESCC----TTHHHHSCCCEE
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhh--cCEEEECCC----CCCcccCCCcce
Confidence 3457899999999999999999999999999888888775 35567 999887532 211
Q ss_pred ----------------------HHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHH-cCCeEEEEeCC
Q 020871 241 ----------------------PSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATR-AGMACVITYTS 284 (320)
Q Consensus 241 ----------------------~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~-aG~~~v~v~~~ 284 (320)
.-....+.+.+|..-.+|+||||+. .|+..++. .||.+++|-..
T Consensus 259 ~v~~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 259 SVNPENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp EECTTTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred EEECCCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 0115667788899989999999999 69888876 69999988654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1.8e-06 Score=72.03 Aligned_cols=43 Identities=7% Similarity=-0.197 Sum_probs=32.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEec----CHhhHHHHHHcCCeEEEE
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVIT 281 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD----~~~Dv~~a~~aG~~~v~v 281 (320)
.+-.+...+..+ +|++++++++||| +.||++|.+.+|...+.+
T Consensus 185 ~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av 231 (246)
T 2amy_A 185 DGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV 231 (246)
T ss_dssp TTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC
T ss_pred CCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe
Confidence 334445566666 8999999999999 999999999999755555
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.02 E-value=1e-05 Score=61.01 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=29.8
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchh---hHHHHHHHhhCCc
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKS---SVILCLENLIGME 220 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~---~~~~~l~~~~~l~ 220 (320)
..|++.++|+.|+++|+.++++|+.... .+...++.+ |+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~-gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR-GLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT-TCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHc-CCC
Confidence 5578999999999999999999998743 333444443 553
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.93 E-value=3.2e-05 Score=77.31 Aligned_cols=119 Identities=17% Similarity=0.203 Sum_probs=77.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC----------------------cceEEeCCCC--
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG----------------------LDCFLAGDDV-- 234 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~----------------------fd~v~~~~~~-- 234 (320)
++.|++.+.++.|++.|++++++|+.+......+.+++ |+..... ...++.+.+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l-gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc-CCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 46799999999999999999999999999888888887 8753100 0112221110
Q ss_pred ----------------CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceec
Q 020871 235 ----------------KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298 (320)
Q Consensus 235 ----------------~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~ 298 (320)
...+-.|+-...+.+.+.-..+.++|+||+.||+.|.+.|++..++-.+ +.....+.++.++
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~--gtd~ak~aAD~Vl 755 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIS--GSDVSKQAADMIL 755 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSS--CCHHHHHHCSEEE
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCc--cCHHHHHhcCEEe
Confidence 1112334443444433322236799999999999999999998766212 2323334566665
Q ss_pred cc
Q 020871 299 PD 300 (320)
Q Consensus 299 ~~ 300 (320)
.+
T Consensus 756 ~~ 757 (1028)
T 2zxe_A 756 LD 757 (1028)
T ss_dssp TT
T ss_pred cC
Confidence 43
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.91 E-value=4.5e-05 Score=76.35 Aligned_cols=122 Identities=16% Similarity=0.154 Sum_probs=78.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC----------------------cceEEeCCCCC-
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG----------------------LDCFLAGDDVK- 235 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~----------------------fd~v~~~~~~~- 235 (320)
++.|++.+.++.|+++|++++++|+.+......+.+.+ |+..-.. ...++.+.+..
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~l-gi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV-GIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 57899999999999999999999999998888888886 7742100 01122221110
Q ss_pred -----------------CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceec
Q 020871 236 -----------------QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298 (320)
Q Consensus 236 -----------------~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~ 298 (320)
...-.|+-...+.+.+.-....++++||+.||+.|.+.||+..++-. ...+...+.++.++
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~--ng~d~aK~aAD~Vl 760 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI--AGSDAAKNAADMIL 760 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCC--ccCHHHHHhcCEEe
Confidence 01112323233333333223568999999999999999999877631 23334445678777
Q ss_pred ccccc
Q 020871 299 PDLSN 303 (320)
Q Consensus 299 ~~~~~ 303 (320)
.+...
T Consensus 761 ~~~~~ 765 (1034)
T 3ixz_A 761 LDDNF 765 (1034)
T ss_pred ccCCc
Confidence 65433
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00012 Score=72.00 Aligned_cols=115 Identities=15% Similarity=0.137 Sum_probs=75.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc-Ccc-eEEeCC---------------C-CCCCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE-GLD-CFLAGD---------------D-VKQKKPD 240 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~-~fd-~v~~~~---------------~-~~~~KP~ 240 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+.... .-+ .++.+. + ...-.|+
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~l-GI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~ 613 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQL-GLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQ 613 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHH-TSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCST
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHc-CCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHH
Confidence 57899999999999999999999999999898888887 885310 000 011100 0 1112232
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecc
Q 020871 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP 299 (320)
Q Consensus 241 ~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~ 299 (320)
--..+++.+.-.-+.+.|+||+.||..+.+.|++...+- .......+.++.++.
T Consensus 614 --~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg---~gtd~ak~aADiVl~ 667 (920)
T 1mhs_A 614 --HKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE---GSSDAARSAADIVFL 667 (920)
T ss_dssp --HHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET---TSCHHHHHSSSEEES
T ss_pred --HHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc---cccHHHHHhcCeEEc
Confidence 223333333222367999999999999999999987662 233333345666653
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=6.4e-05 Score=62.53 Aligned_cols=30 Identities=7% Similarity=-0.138 Sum_probs=24.6
Q ss_pred CCCCEEEEecC----HhhHHHHHHcCCeEEEEeC
Q 020871 254 SEKDCLVVEDS----VIGLQAATRAGMACVITYT 283 (320)
Q Consensus 254 ~~~~~v~VGD~----~~Dv~~a~~aG~~~v~v~~ 283 (320)
+++++++|||+ .||++|.+.+|..++.|.+
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 57899999995 8999999988876666643
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.67 E-value=6.5e-05 Score=55.56 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=25.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchh
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~ 207 (320)
.+.+++.+.++.|++.|++++++|+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 46788999999999999999999998754
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.65 E-value=3.1e-05 Score=75.90 Aligned_cols=117 Identities=15% Similarity=0.059 Sum_probs=74.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCC-----------------CCCCCCH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV-----------------KQKKPDP 241 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~-----------------~~~KP~~ 241 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+..-..-+.++.+.+. ....-.|
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~l-Gi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-GMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTT-TCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHh-CCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 47899999999999999999999999998888888887 87421000111111100 0111223
Q ss_pred HHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecc
Q 020871 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP 299 (320)
Q Consensus 242 ~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~ 299 (320)
+--..+++.+.-.-+.+.|+||+.||..+.+.|++...+- .......+.++.++.
T Consensus 567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg---~gtd~ak~aADivl~ 621 (885)
T 3b8c_A 567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA---DATDAARGASDIVLT 621 (885)
T ss_dssp HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS---SSHHHHGGGCSSCCS
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC---CccHHHHHhcceeec
Confidence 3333333333222367999999999999999999986652 233333345665553
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.42 E-value=3.2e-05 Score=66.60 Aligned_cols=97 Identities=11% Similarity=0.175 Sum_probs=65.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc--eEEeCCC-CC-CCCCCHHHHHHHHHHc---
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--CFLAGDD-VK-QKKPDPSIYVTAAKRL--- 251 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd--~v~~~~~-~~-~~KP~~~~~~~~~~~l--- 251 (320)
..+||+.++|+.+.+. +.++|.|.+....+..+++.+ +......+. .+..++. +. ..+.....|..-++.+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~L-d~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~ 241 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLL-GVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWAL 241 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHT-TCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHH
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHh-CCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcc
Confidence 4899999999999965 999999999999999999987 554331122 1222211 11 0111111233345555
Q ss_pred --CCCCCCEEEEecCHhhHHHHHHcCCe
Q 020871 252 --GISEKDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 252 --~~~~~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
|.+++++|+|+|++.-.......|+.
T Consensus 242 ~p~rdl~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 242 YKQYNSSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp CTTCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred cCCCChhHEEEEeCChHHhccCcCceEE
Confidence 88899999999999877776666654
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0021 Score=53.70 Aligned_cols=48 Identities=6% Similarity=-0.087 Sum_probs=35.5
Q ss_pred cCCCCCCEEEEec----CHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 251 LGISEKDCLVVED----SVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 251 l~~~~~~~v~VGD----~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
+|++++++++||| +.||++|.+.+|...+.+ +++..+....++++.++
T Consensus 206 ~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av--~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 206 DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SSHHHHHHHHHHHHCTT
T ss_pred HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe--cCCCHHHHHhhheeCCC
Confidence 7889999999999 999999999999865666 33443333445555544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0011 Score=55.53 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=28.1
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcc--cCCCCccccCC
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFN--VRCDPSSQQSL 108 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g--~~~~~~~~~~~ 108 (320)
++|+|+||+||||++....+.+...++++++. +.....++|++
T Consensus 12 ~~kli~~DlDGTLl~~~~~is~~~~~al~~l~~~i~v~iaTGR~~ 56 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSRVQIGVVGGSDY 56 (262)
T ss_dssp -CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTTSEEEEECSSCH
T ss_pred CeEEEEEeCccCCCCCCCcCCHHHHHHHHHHHhCCEEEEEcCCCH
Confidence 68999999999999987555445555544331 45555566644
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.24 Score=40.21 Aligned_cols=80 Identities=14% Similarity=0.156 Sum_probs=60.2
Q ss_pred EEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCe
Q 020871 198 VAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 198 i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~ 277 (320)
-+++|++.--.....+- ++|++.++..+.|+++-.++ +...|+.+.+++| +...-++|||+..-=++|+..+|+
T Consensus 179 NVLVTs~qLVPaLaK~L-LygL~~~fpieNIYSa~kiG----KesCFerI~~RFG-~k~~yvvIGDG~eEe~AAk~~n~P 252 (274)
T 3geb_A 179 NVLVTTTQLIPALAKVL-LYGLGSVFPIENIYSATKTG----KESCFERIMQRFG-RKAVYVVIGDGVEEEQGAKKHNMP 252 (274)
T ss_dssp EEEEESSCHHHHHHHHH-HTTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHC-TTSEEEEEESSHHHHHHHHHTTCC
T ss_pred EEEEecCchHHHHHHHH-HhhcccceecccccchhhcC----HHHHHHHHHHHhC-CCceEEEECCCHHHHHHHHHcCCC
Confidence 35677765432222221 26999998888999987664 4669999999998 446778899999999999999999
Q ss_pred EEEEeC
Q 020871 278 CVITYT 283 (320)
Q Consensus 278 ~v~v~~ 283 (320)
++-+..
T Consensus 253 FwrI~~ 258 (274)
T 3geb_A 253 FWRISC 258 (274)
T ss_dssp EEECCS
T ss_pred eEEeec
Confidence 887644
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.01 Score=53.02 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=59.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc-ccCcce-EEeCCCCCCCCCCHHHHHHHHHH-cCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDC-FLAGDDVKQKKPDPSIYVTAAKR-LGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~-~~~fd~-v~~~~~~~~~KP~~~~~~~~~~~-l~~~ 254 (320)
+...||+.++|+.+. .+|.++|+|.+...++..+++.+ +... + |.. +++.++.+.. |..-+++ +|.+
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~L-Dp~~~~--f~~Rl~sRd~cg~~------~~KdL~~ll~rd 151 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII-DPTGKL--FQDRVLSRDDSGSL------AQKSLRRLFPCD 151 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHH-CTTSTT--TTTCEECTTTSSCS------SCCCGGGTCSSC
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHh-ccCCcc--ccceEEEecCCCCc------eeeehHHhcCCC
Confidence 578999999999998 56999999999999999999987 6554 5 565 5545544321 1112333 4888
Q ss_pred CCCEEEEecCHh
Q 020871 255 EKDCLVVEDSVI 266 (320)
Q Consensus 255 ~~~~v~VGD~~~ 266 (320)
.+.+|+|+|++.
T Consensus 152 l~~vvIIDd~p~ 163 (442)
T 3ef1_A 152 TSMVVVIDDRGD 163 (442)
T ss_dssp CTTEEEEESCSG
T ss_pred cceEEEEECCHH
Confidence 999999999985
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=95.09 E-value=0.056 Score=47.12 Aligned_cols=86 Identities=9% Similarity=0.016 Sum_probs=59.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCch---hhHHHHHH-HhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATK---SSVILCLE-NLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---~~~~~~l~-~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
.++||+.+.|+.|++.|+++.++||+.. ......+. .+ |+..- .+.++.+...... .++ .
T Consensus 29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~l-gi~~~--~~~i~ts~~~~~~---------~~~----~ 92 (352)
T 3kc2_A 29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKL-DVDVS--PLQIIQSHTPYKS---------LVN----K 92 (352)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHH-TSCCC--GGGEECTTGGGGG---------GTT----T
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhc-CCCCC--hhhEeehHHHHHH---------HHh----c
Confidence 5789999999999999999999999863 33333444 44 87644 6788877432210 111 2
Q ss_pred CCCEEEEecCHhhHHHHHHcCCeEEEE
Q 020871 255 EKDCLVVEDSVIGLQAATRAGMACVIT 281 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~~~v~v 281 (320)
...+++||-. .-.+.++.+|+..+..
T Consensus 93 ~~~v~viG~~-~l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 93 YSRILAVGTP-SVRGVAEGYGFQDVVH 118 (352)
T ss_dssp CSEEEEESST-THHHHHHHHTCSEEEE
T ss_pred CCEEEEECCH-HHHHHHHhCCCeEecc
Confidence 3567888865 5577888999997753
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.0083 Score=50.55 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=37.4
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCC---chhhHHHHHHHhhCCc-cccCcceEEeC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAA---TKSSVILCLENLIGME-RFEGLDCFLAG 231 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~---~~~~~~~~l~~~~~l~-~~~~fd~v~~~ 231 (320)
++|++.+.|+.|++.|++++++||+ ........++.+ |+. .. ++.++++
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~l-g~~~~~--~~~ii~~ 83 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKL-GLFSIT--ADKIISS 83 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHT-TCTTCC--GGGEEEH
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHC-CcCCCC--HhhEEcH
Confidence 6789999999999999999999983 445556666665 776 54 5566554
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.07 E-value=0.31 Score=40.19 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=56.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHh--hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~--~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..|++.+.|+.|++.|++++++||+.........+.+ .|+... .+.++++. ......+++.. ...+
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~--~~~i~~~~---------~~~~~~l~~~~-~~~~ 85 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVS--SSIIITSG---------LATRLYMSKHL-DPGK 85 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCC--GGGEEEHH---------HHHHHHHHHHS-CCCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC--hhhEEecH---------HHHHHHHHHhC-CCCE
Confidence 4589999999999999999999998865555444443 265433 45555531 12333344432 3367
Q ss_pred EEEEecCHhhHHHHHHcCCeE
Q 020871 258 CLVVEDSVIGLQAATRAGMAC 278 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~~ 278 (320)
+.++|+. .....++..|+..
T Consensus 86 v~viG~~-~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 86 IFVIGGE-GLVKEMQALGWGI 105 (263)
T ss_dssp EEEESCH-HHHHHHHHHTSCB
T ss_pred EEEEcCH-HHHHHHHHcCCee
Confidence 8888875 5667777788753
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=91.20 E-value=0.03 Score=46.19 Aligned_cols=45 Identities=11% Similarity=0.167 Sum_probs=32.5
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHh---cccCCCCccccCCC
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSH---FNVRCDPSSQQSLN 109 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~ 109 (320)
|++|+|+||+||||++....+.+...+++++ .|+.....++|++.
T Consensus 2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~ 49 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSDFA 49 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred CCceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEECCCCHH
Confidence 4689999999999999876555555555543 47777776666553
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=90.58 E-value=0.36 Score=39.78 Aligned_cols=48 Identities=25% Similarity=0.324 Sum_probs=36.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCC---chhhHHHHHHHhhCCccccCcceEEe
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAA---TKSSVILCLENLIGMERFEGLDCFLA 230 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~---~~~~~~~~l~~~~~l~~~~~fd~v~~ 230 (320)
+.|++.+.|++|+++|++++++||+ ........++.+ |+... .+.+++
T Consensus 25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~l-g~~~~--~~~ii~ 75 (268)
T 3qgm_A 25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSF-GLEVG--EDEILV 75 (268)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHT-TCCCC--GGGEEE
T ss_pred eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHC-CCCCC--HHHeeC
Confidence 6689999999999999999999994 455555666665 77543 455554
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=89.87 E-value=1.4 Score=34.68 Aligned_cols=89 Identities=17% Similarity=0.241 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEe
Q 020871 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVE 262 (320)
Q Consensus 183 g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VG 262 (320)
++...|...++.+-++++++-.+.......+..+++++- ....... .-+.+....-++.-|++ ++||
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i----~~~~~~~-----~~e~~~~i~~l~~~G~~----vvVG 148 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKI----KEFLFSS-----EDEITTLISKVKTENIK----IVVS 148 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEE----EEEEECS-----GGGHHHHHHHHHHTTCC----EEEE
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCce----EEEEeCC-----HHHHHHHHHHHHHCCCe----EEEC
Confidence 667777777887889999886654434445555557652 2221111 01112233334445653 5799
Q ss_pred cCHhhHHHHHHcCCeEEEEeCCC
Q 020871 263 DSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 263 D~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
|+.. ...|++.|++++++.++.
T Consensus 149 ~~~~-~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 149 GKTV-TDEAIKQGLYGETINSGE 170 (196)
T ss_dssp CHHH-HHHHHHTTCEEEECCCCH
T ss_pred CHHH-HHHHHHcCCcEEEEecCH
Confidence 8887 789999999999987753
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=89.77 E-value=5 Score=32.86 Aligned_cols=96 Identities=14% Similarity=0.137 Sum_probs=62.7
Q ss_pred CCChhHHHHHHH---HHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEe-CCCCCCC--CCCHHHHHHHHHHcC
Q 020871 179 EPRPGVLRLMDE---AKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA-GDDVKQK--KPDPSIYVTAAKRLG 252 (320)
Q Consensus 179 ~~~~g~~~~l~~---L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~-~~~~~~~--KP~~~~~~~~~~~l~ 252 (320)
.++|+..++++. |.+.|+++..+++.+... -+.++.+ |- +.+.- +..++.+ -.+++.+..+.+..+
T Consensus 116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~-akrl~~~-G~------~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~ 187 (265)
T 1wv2_A 116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPII-ARQLAEI-GC------IAVMPLAGLIGSGLGICNPYNLRIILEEAK 187 (265)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHH-HHHHHHS-CC------SEEEECSSSTTCCCCCSCHHHHHHHHHHCS
T ss_pred ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHh-CC------CEEEeCCccCCCCCCcCCHHHHHHHHhcCC
Confidence 456777666665 555599998655555553 3455554 43 33333 3334433 357888888888666
Q ss_pred CCCCCEEEEe---cCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 253 ISEKDCLVVE---DSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 253 ~~~~~~v~VG---D~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
++ |+++ .++.|+..+-..|+..|+|++...
T Consensus 188 vP----VI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 188 VP----VLVDAGVGTASDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp SC----BEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred CC----EEEeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 54 5566 344799999999999999987543
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.34 E-value=0.88 Score=37.36 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=30.1
Q ss_pred ChhHHHHHHHHHHCCCcEEEEeCC---chhhHHHHHHHhhCCcc
Q 020871 181 RPGVLRLMDEAKAAGKKVAVCSAA---TKSSVILCLENLIGMER 221 (320)
Q Consensus 181 ~~g~~~~l~~L~~~g~~i~i~Tn~---~~~~~~~~l~~~~~l~~ 221 (320)
.|++.+.|++|+++|++++++||+ ........++.+ |+..
T Consensus 24 ~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~l-g~~~ 66 (266)
T 3pdw_A 24 IEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSF-DIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHT-TCCC
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc-CCCC
Confidence 357889999999999999999994 344455566665 6653
|
| >2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1 | Back alignment and structure |
|---|
Probab=85.39 E-value=1.2 Score=35.95 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHH---HHcCCCCCCEE
Q 020871 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA---KRLGISEKDCL 259 (320)
Q Consensus 183 g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~---~~l~~~~~~~v 259 (320)
++...|...++.+-++++++-.+.-.....+..+++++- ...... +++-...++ +.-|++ +
T Consensus 94 Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i----~~~~~~--------~~ee~~~~i~~l~~~G~~----v 157 (225)
T 2pju_A 94 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRL----DQRSYI--------TEEDARGQINELKANGTE----A 157 (225)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCE----EEEEES--------SHHHHHHHHHHHHHTTCC----E
T ss_pred HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCce----EEEEeC--------CHHHHHHHHHHHHHCCCC----E
Confidence 555556666666778999987665444445555556652 222111 122223333 344653 5
Q ss_pred EEecCHhhHHHHHHcCCeEEEEeC
Q 020871 260 VVEDSVIGLQAATRAGMACVITYT 283 (320)
Q Consensus 260 ~VGD~~~Dv~~a~~aG~~~v~v~~ 283 (320)
+|||+.. ...|++.|++++++.+
T Consensus 158 VVG~~~~-~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 158 VVGAGLI-TDLAEEAGMTGIFIYS 180 (225)
T ss_dssp EEESHHH-HHHHHHTTSEEEESSC
T ss_pred EECCHHH-HHHHHHcCCcEEEECC
Confidence 7998887 7899999999999874
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=84.02 E-value=1.2 Score=36.55 Aligned_cols=46 Identities=20% Similarity=0.272 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHHCCCcEEEEeCCc---hhhHHHHHHHhhCCccccCcceEEe
Q 020871 182 PGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGMERFEGLDCFLA 230 (320)
Q Consensus 182 ~g~~~~l~~L~~~g~~i~i~Tn~~---~~~~~~~l~~~~~l~~~~~fd~v~~ 230 (320)
|++.+.|++++++|++++++||+. .......++.+ |+... .+.+++
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~l-g~~~~--~~~ii~ 72 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGF-NVETP--LETIYT 72 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTT-TCCCC--GGGEEE
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHC-CCCCC--hhheec
Confidence 899999999999999999999754 33444555554 66533 344544
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=83.45 E-value=2.1 Score=35.50 Aligned_cols=42 Identities=26% Similarity=0.334 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.+.+...+.|++|+++|++++++|+.....+...++.+ ++..
T Consensus 22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l-~l~~ 63 (282)
T 1rkq_A 22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKEL-HMEQ 63 (282)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHT-TCCS
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh-CCCC
Confidence 57788899999999999999999999988888888876 7653
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=80.29 E-value=2.3 Score=35.70 Aligned_cols=41 Identities=24% Similarity=0.428 Sum_probs=32.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCc---hhhHHHHHHHhhCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGME 220 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~---~~~~~~~l~~~~~l~ 220 (320)
.++|++.+.++.|++.|++++++||+. .......++.+ |+.
T Consensus 37 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~-g~~ 80 (306)
T 2oyc_A 37 RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARL-GFG 80 (306)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHT-TCC
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhc-CCC
Confidence 477899999999999999999999843 44455566665 665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 320 | ||||
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 1e-24 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 2e-22 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 1e-19 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 2e-19 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 2e-19 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 2e-18 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 9e-16 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 2e-14 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 3e-14 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 6e-14 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 3e-13 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 9e-13 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 1e-12 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 2e-12 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 2e-12 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 3e-12 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 3e-12 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-12 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 3e-09 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 1e-08 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 2e-08 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 6e-08 | |
| d2c4na1 | 250 | c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId | 3e-06 | |
| d1vjra_ | 261 | c.108.1.14 (A:) Hypothetical protein TM1742 {Therm | 5e-05 | |
| d1wvia_ | 253 | c.108.1.14 (A:) Putative phosphatase SMU.1415c {St | 7e-05 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 2e-04 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 0.002 |
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 97.5 bits (241), Expect = 1e-24
Identities = 28/230 (12%), Positives = 64/230 (27%), Gaps = 16/230 (6%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
FD DGV+ A+ + + +F P
Sbjct: 2 VAAFDLDGVLALPSIAG--AFRRSEEALAL------------PRDFLLGAYQTEFPEGPT 47
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ + + + +A +L +++ + + +L+
Sbjct: 48 EQLMKGKITFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAAR-SINRPMLQAA 106
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLAGDDVKQKKPDPSIYVTA 247
K G + + M D + V KP+P IY
Sbjct: 107 IALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFL 166
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 297
L + + ++D L+ A GM ++ + +++A ++ +
Sbjct: 167 LDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELEKVTGT 216
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 91.1 bits (224), Expect = 2e-22
Identities = 48/250 (19%), Positives = 80/250 (32%), Gaps = 33/250 (13%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+A++FD DGVI ++ H +A+ + D LQ +
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLAD 61
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
K+ + + D A + I + IK
Sbjct: 62 KKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF 121
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
L++ M D +V KP P I++
Sbjct: 122 LLER----------------------------MNLTGYFDAIADPAEVAASKPAPDIFIA 153
Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL 306
AA +G++ + + +EDS G+QA +G + +D D I I PD S+ L
Sbjct: 154 AAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV----GRPEDLGDDIVIVPDTSHYTL 209
Query: 307 KDL-ELLLQN 315
+ L E+ LQ
Sbjct: 210 EFLKEVWLQK 219
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.1 bits (206), Expect = 1e-19
Identities = 34/233 (14%), Positives = 67/233 (28%), Gaps = 16/233 (6%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
+L+A +FD DGV+ + L + + G
Sbjct: 1 TLRAAVFDLDGVLALPAVFGVLGRTEEA--------------LALPRGLLNDAFQKGGPE 46
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
R E + + L +++ + S + +L
Sbjct: 47 GATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISA-RKINRPML 105
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLAGDDVKQKKPDPSIY 244
+ + G A+ + M + D + V KP+P IY
Sbjct: 106 QAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIY 165
Query: 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 297
L S + + ++D L+ A GM ++ + TA ++ + I
Sbjct: 166 KFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGI 218
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 83.3 bits (204), Expect = 2e-19
Identities = 43/244 (17%), Positives = 90/244 (36%), Gaps = 31/244 (12%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+ A IFD DG++I+SE L +A D + V D + L + +G
Sbjct: 3 ILAAIFDMDGLLIDSEPLWDRAELDVMASLGV------------DISRRNELPDTLGLRI 50
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
+ + + ++++ + ++ + P
Sbjct: 51 DMVVDLWYARQPWNGPSRQ-------------EVVERVIARAISLVEETRPLLPGV---- 93
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246
+ ++ + A+ S + + + L + + D + + + KP P +Y+
Sbjct: 94 -REAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLD 152
Query: 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVR 305
A +LG+ C+ +EDSV G+ A+ A M + + + + F A L+ +
Sbjct: 153 CAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212
Query: 306 LKDL 309
KDL
Sbjct: 213 AKDL 216
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 83.7 bits (205), Expect = 2e-19
Identities = 33/247 (13%), Positives = 67/247 (27%), Gaps = 12/247 (4%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAF--------SHFNVRCDPSSQQSLNWDPEFYDV 117
+ ++ D +G + + +H+ L E
Sbjct: 6 EVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH 65
Query: 118 LQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT 177
L + + + + D+ R
Sbjct: 66 LDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMK 125
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK 237
E V+ + + + AG KV + S+ + + L + + E +D D
Sbjct: 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG--HFDTKIGH 183
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC--VITYTSSTAEQDFKDAI 295
K + Y A +G S + L + D AA A + V+ ++ D K
Sbjct: 184 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYY 243
Query: 296 AIYPDLS 302
++ S
Sbjct: 244 SLITSFS 250
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 81.4 bits (199), Expect = 2e-18
Identities = 37/257 (14%), Positives = 82/257 (31%), Gaps = 25/257 (9%)
Query: 67 LQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
++A+IF G ++ + + + F V + + +G
Sbjct: 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITA-------------EEARKPMGLL 48
Query: 126 KPKMRWYFKEHGWPSSTI--FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
K E +S T+ D ++ + ++ + P G
Sbjct: 49 KIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPR-----YASPING 103
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
V ++ + G K+ + T+ + + + D + DDV +P P +
Sbjct: 104 VKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP--DFLVTPDDVPAGRPYPWM 161
Query: 244 YVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDL 301
A LG+ + + V D+V ++ AGM V + SS ++ +
Sbjct: 162 CYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVE 221
Query: 302 SNVRLKDLELLLQNVVA 318
+++ + A
Sbjct: 222 LREKIEVVRNRFVENGA 238
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 72.5 bits (176), Expect = 9e-16
Identities = 35/223 (15%), Positives = 66/223 (29%), Gaps = 30/223 (13%)
Query: 71 IFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR 130
IFD VI++ + + L+ G+ +
Sbjct: 4 IFDLGNVIVDIDFNRVLGAWSDLTRIP-----------------LASLKKSFHMGEAFHQ 46
Query: 131 WYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDE 190
E G S F + + + V RP V+ +M +
Sbjct: 47 H---ERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVF--------VALRPEVIAIMHK 95
Query: 191 AKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKR 250
+ G +V V S + E + D D+ +KP+ IY +
Sbjct: 96 LREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDLGMRKPEARIYQHVLQA 153
Query: 251 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 293
G S D + +D+ ++ A + G+ ++ +T F
Sbjct: 154 EGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAK 196
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 69.4 bits (168), Expect = 2e-14
Identities = 27/249 (10%), Positives = 70/249 (28%), Gaps = 27/249 (10%)
Query: 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
++FD DG +++ E ++R+ DA +D G +
Sbjct: 5 VLFDIDGTLLKVESMNRRVLADALIEVYGT---------EGSTGSHDFSGKMDGAI---I 52
Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
G + A D ++ +++ + + GV L+D
Sbjct: 53 YEVLSNVGLE-----------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLD 101
Query: 190 EAKAAGKKV-AVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
+ + + + ++S L+ F D +
Sbjct: 102 ALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRM 161
Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 308
S +++ D+ ++ A + T + ++ P +
Sbjct: 162 TGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARH---KPGTLFKNFAE 218
Query: 309 LELLLQNVV 317
+ +L +++
Sbjct: 219 TDEVLASIL 227
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 68.7 bits (166), Expect = 3e-14
Identities = 43/247 (17%), Positives = 78/247 (31%), Gaps = 33/247 (13%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+IFDCDGV+++SE + Q + + E +
Sbjct: 3 DLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISV---------EEMGERFAGMTWKNIL 53
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+S + + + D + + +I K +
Sbjct: 54 LQVESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTT-------------- 99
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
+CS ++ + + L + F + KP P I++
Sbjct: 100 ---------PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHG 150
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRL 306
A + G+S +VVEDSV G+ A AGM + T S T + R+
Sbjct: 151 AAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRM 210
Query: 307 KDLELLL 313
+DL ++
Sbjct: 211 QDLPAVI 217
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 67.0 bits (162), Expect = 6e-14
Identities = 27/226 (11%), Positives = 61/226 (26%), Gaps = 43/226 (19%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
I+D G ++++ A+ + + + +
Sbjct: 4 HDYIWDLGGTLLDNYETSTAAFVETLALYGI--TQDHDSVYQALKVSTPFAIETFAPNLE 61
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+KE+ + + L + + D + Q + V R +
Sbjct: 62 NFLEKYKENEA-----------RELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE 110
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
+ E + ++KP+P +
Sbjct: 111 ILE---------------------------KTSIAAYFTEVVTSSSGFKRKPNPESMLYL 143
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 293
++ IS LV+ D I ++A AG+ + +TS + D
Sbjct: 144 REKYQISS--GLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLD 186
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 66.0 bits (159), Expect = 3e-13
Identities = 31/241 (12%), Positives = 64/241 (26%), Gaps = 21/241 (8%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
+ + D +G + + + + P Q D ++L
Sbjct: 1 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKV-----PQLVQQDTRDSPVSNILSQFHID 55
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
K +++ + E D L L Y+ V
Sbjct: 56 NKEQLQAHILELVA-----------KDVKDPILKQLQGYVWAHGYESGQIKAPVYADA-- 102
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG---DDVKQKKPDP 241
+ + K + A K + L+ ++ G + KK +
Sbjct: 103 IDFIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTET 162
Query: 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL 301
Y + +G + L + D+ + L AA G+A + A +Y +
Sbjct: 163 QSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNF 222
Query: 302 S 302
Sbjct: 223 E 223
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 64.1 bits (154), Expect = 9e-13
Identities = 23/236 (9%), Positives = 63/236 (26%), Gaps = 39/236 (16%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
A I+D DG +++S + F+ F++ D + + D+ +
Sbjct: 3 AFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDL--------LVR 54
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ + + + Q L+ ++ + I+ + +
Sbjct: 55 VAEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTI 114
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAA 248
+ + L +KP P
Sbjct: 115 LK---------------------------DLGVESYFTEILTSQSGFVRKPSPEAATYLL 147
Query: 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAE---QDFKDAIAIYPD 300
+ ++ + + D + ++ A +G+ + ++ Q D I+
Sbjct: 148 DKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTYEGNHRIQALADISRIFET 203
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 63.8 bits (153), Expect = 1e-12
Identities = 30/239 (12%), Positives = 68/239 (28%), Gaps = 37/239 (15%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
+ QAL+FD DG + S+ + + + + + P
Sbjct: 2 TYQALMFDIDGTLTNSQPAYTTVMREVLATYG----------KPFSPAQAQKTFPMAAEQ 51
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+++ + DQ +L I + ++
Sbjct: 52 AMTELGIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELR------------ 99
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
T + + ++ DD ++KPDP +
Sbjct: 100 ---------------LGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLL 144
Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 304
TA +++ ++ ++ L + DSV Q A A + + D + + ++
Sbjct: 145 TALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI 203
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.1 bits (154), Expect = 2e-12
Identities = 32/250 (12%), Positives = 78/250 (31%), Gaps = 17/250 (6%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+A+ FD D +I++ R+ + + + + D + +
Sbjct: 7 RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYST 66
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ H + + L + + + + V +
Sbjct: 67 CITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQH---------MILADDVKAM 117
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
+ E + + + + + ++ + + K++KP PSI+
Sbjct: 118 LTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGG----EQKEEKPAPSIFYHC 173
Query: 248 AKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL 306
LG+ DC++V D++ +Q AG+ + S + P +
Sbjct: 174 CDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKS---GRVPLTSSPMPHYMVSSV 230
Query: 307 KDLELLLQNV 316
+L LLQ++
Sbjct: 231 LELPALLQSI 240
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 63.4 bits (152), Expect = 2e-12
Identities = 39/238 (16%), Positives = 72/238 (30%), Gaps = 25/238 (10%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+ + FD G + + + + ++AF W + + + +
Sbjct: 3 KGIAFDLYGTLFDVHSVVGRC-DEAFPGRGREISAL------WRQKQLEYTWLRSLMNRY 55
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
E + + ++ L D P V
Sbjct: 56 VNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRL--------------APFSEVPDS 101
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
+ E K G K+A+ S + S+ + + + F D L+ D V+ KPD +Y A
Sbjct: 102 LRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF---DHLLSVDPVQVYKPDNRVYELA 158
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNV 304
+ LG+ L V + A G I T + E+ + L V
Sbjct: 159 EQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 63.0 bits (151), Expect = 3e-12
Identities = 41/247 (16%), Positives = 64/247 (25%), Gaps = 27/247 (10%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+ + FD DG ++ S + N A N+
Sbjct: 5 KLIGFDLDGTLVNSLPDLALSINSALKDVNLPQ---------ASENLVMTWIGNGADVLS 55
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ + D + Y P V
Sbjct: 56 QRAVDWACKQAEKELTEDEFK------------YFKRQFGFYYGENLCNISRLYPNVKET 103
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
++ KA G +AV + V L F L G + + KP P+ +
Sbjct: 104 LEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF---SEMLGGQSLPEIKPHPAPFYYL 160
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLK 307
+ G+ K L V DS + AA AG A V + PD
Sbjct: 161 CGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQS---KPDWIFDDFA 217
Query: 308 DLELLLQ 314
D+ + Q
Sbjct: 218 DILKITQ 224
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 62.9 bits (151), Expect = 3e-12
Identities = 42/267 (15%), Positives = 79/267 (29%), Gaps = 45/267 (16%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+A++FD G + + + + A A+ P + + +
Sbjct: 3 KAVVFDAYGTLFDVQSVAD-ATERAY------------------PGRGEYITQVWRQKQL 43
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ W G D VT + A + + E + + P
Sbjct: 44 EYSWLRALMGR----YADFWSVTREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAA 99
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247
A+ A K A+ S + + N + F+ + D + KP P Y
Sbjct: 100 QCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISV---DAKRVFKPHPDSYALV 156
Query: 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACV-------------------ITYTSSTAE 288
+ LG++ + L V + + A G + T A
Sbjct: 157 EEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKAL 216
Query: 289 QDFKDAIAIYPDLSNVRLKDLELLLQN 315
+ ++ A PD L DL L++
Sbjct: 217 RMREETYAEAPDFVVPALGDLPRLVRG 243
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 63.7 bits (154), Expect = 5e-12
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 26/163 (15%)
Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV----- 234
P V L+++ K AG ++ + + + ++ ENL G+ + D DV
Sbjct: 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL-GLLPYFEADFIATASDVLEAEN 274
Query: 235 ------KQKKPDPSIYVTAAKRLGISE--------------KDCLVVEDSVIGLQAATRA 274
KP+P Y+ A + D +V DS+ L +A +
Sbjct: 275 MYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKI 334
Query: 275 GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317
G + T T + + A + D L +L +L N++
Sbjct: 335 GATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLL 377
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.9 bits (126), Expect = 3e-09
Identities = 24/166 (14%), Positives = 41/166 (24%), Gaps = 24/166 (14%)
Query: 143 IFD-----NPPVTDDDQAKLIDLIQDWK-TERYQQIIKSGTVEPRPGVLRLMDEAKAAGK 196
+FD P D D +R Q I+ P V ++ ++ G
Sbjct: 9 VFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQ-----LYPEVPEVLGRLQSLGV 63
Query: 197 KVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256
VA S + + + G+
Sbjct: 64 PVAAASRT-------SEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFS 116
Query: 257 DCLVVEDSVIGLQAATRAGMACVIT---YTSSTAEQ---DFKDAIA 296
+ +D + R G+ C+ + T Q F A A
Sbjct: 117 QMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAKAQA 162
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 52.5 bits (124), Expect = 1e-08
Identities = 27/233 (11%), Positives = 59/233 (25%), Gaps = 38/233 (16%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
S+ A+ FD DG +++S A+ F V D +
Sbjct: 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPS---------PDAKTIRGFMGPPLES 53
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+ +A+L I D E
Sbjct: 54 SFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSY------------- 100
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYV 245
+ + + S+ +NL F+G+ + +
Sbjct: 101 -----------PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGS-----SPEAPHKADVIH 144
Query: 246 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY 298
A + ++ + +++ D+ + A G+ + + D + Y
Sbjct: 145 QALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDY 197
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 51.8 bits (122), Expect = 2e-08
Identities = 33/242 (13%), Positives = 71/242 (29%), Gaps = 25/242 (10%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A+ FD G ++ E + ++ + N G
Sbjct: 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQI---IKSGTVEPRPG 183
+R + ++ KL + E + +I + E P
Sbjct: 62 RPIR-----------------DIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPE 104
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSI 243
V+ ++ K + + T+ + I + KP P I
Sbjct: 105 VVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSE----EAGFFKPHPRI 160
Query: 244 YVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302
+ A K+ G+ ++ + V D+ + + GM ++ + + I DL
Sbjct: 161 FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLR 220
Query: 303 NV 304
V
Sbjct: 221 EV 222
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 50.4 bits (119), Expect = 6e-08
Identities = 30/254 (11%), Positives = 62/254 (24%), Gaps = 60/254 (23%)
Query: 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
+I D DG I ++ + F P + L++ + +
Sbjct: 7 IICDFDGTITMND-----NIINIMKTFA--------------PPEWMALKDGVLSKTLSI 47
Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
+ + L+ E + + R G +
Sbjct: 48 KEGVGR---------------------MFGLLPSSLKEEITSFVLE-DAKIREGFREFVA 85
Query: 190 EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQ----------KKP 239
V S V LE ++ +R D +
Sbjct: 86 FINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQ 145
Query: 240 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE---------QD 290
+ L + +++ DSV ++AA + + Y + QD
Sbjct: 146 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQD 205
Query: 291 FKDAIAIYPDLSNV 304
F + ++ V
Sbjct: 206 FYEIRKEIENVKEV 219
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Score = 45.5 bits (106), Expect = 3e-06
Identities = 24/259 (9%), Positives = 70/259 (27%), Gaps = 22/259 (8%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHF-----------NVRCDPSSQQSLNWDPEF 114
+++ +I D DGV++ A + N + +
Sbjct: 2 TIKNVICDIDGVLMHDNVAVPGAA-EFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAG 60
Query: 115 YDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK 174
DV + + + + + + + + +
Sbjct: 61 VDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETR 120
Query: 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDV 234
S + + + +A L ++
Sbjct: 121 SYNWDMMHKAAYFVANGA---RFIATNPDTHGRGFYPACGALCAG-----IEKISGRKPF 172
Query: 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACVITYTSSTAEQDFKD 293
KP P I A ++ ++ ++V D++ + A +AG+ ++ + ++ D
Sbjct: 173 YVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDS 232
Query: 294 AIAIYPDLSNVRLKDLELL 312
P + +++++
Sbjct: 233 M-PFRPSWIYPSVAEIDVI 250
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Score = 41.6 bits (96), Expect = 5e-05
Identities = 34/258 (13%), Positives = 71/258 (27%), Gaps = 17/258 (6%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHF-----------NVRCDPSSQQSLNWDPEFYDV 117
I D DG + L + + N + DV
Sbjct: 9 LFILDMDGTFYLDDSLLPGS-LEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 67
Query: 118 LQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT 177
+ + + + + IF + + D + + + T
Sbjct: 68 PDDAVVTSGEITAEHMLKR-FGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKT 126
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQK 237
+ + K S + M E D+
Sbjct: 127 LTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIE--ASTGRKPDLIAG 184
Query: 238 KPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIA 296
KP+P + +++ G+ ++ +V D + ++ AG+ ++ T T +D + A
Sbjct: 185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA-E 243
Query: 297 IYPDLSNVRLKDLELLLQ 314
PD L +L +Q
Sbjct: 244 TKPDFVFKNLGELAKAVQ 261
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Score = 41.2 bits (95), Expect = 7e-05
Identities = 32/260 (12%), Positives = 66/260 (25%), Gaps = 23/260 (8%)
Query: 66 SLQALIFDCDGVIIESEH-----------LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF 114
+ + + D DG I + + L + N P Q +
Sbjct: 1 TYKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFN 60
Query: 115 YDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK 174
I Y + + L + + +
Sbjct: 61 IKTPLETIYTATLATIDYMNDMKR-------GKTAYVIGETGLKKAVAEAGYREDSENPA 113
Query: 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME---RFEGLDCFLAG 231
V + + T + + E + L+
Sbjct: 114 YVVVGLDTNLTYEKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRV 173
Query: 232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQD 290
+ KP+ I A RLG+ + ++V D+ + A + +A ++ T T ++
Sbjct: 174 KPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEE 233
Query: 291 FKDAIAIYPDLSNVRLKDLE 310
I PD L + +
Sbjct: 234 VPAL-PIQPDFVLSSLAEWD 252
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 39.7 bits (91), Expect = 2e-04
Identities = 28/247 (11%), Positives = 58/247 (23%), Gaps = 19/247 (7%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHF------------NVRCDPSSQQSLNWDPEFY 115
Q + D DG I + N P + +
Sbjct: 3 QGYLIDLDGTIYLGKEPIPAG-KRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDI 61
Query: 116 DVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS 175
V + + Y KE D + E +
Sbjct: 62 HVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEW----DETNPDYVVV 117
Query: 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVK 235
G ++ + + + K+ ++ V
Sbjct: 118 GLDTELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVY 177
Query: 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACVITYTSSTAEQDFKDA 294
KP I A LG+ ++ ++V D+ +Q+ + G+ ++ + T +
Sbjct: 178 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTL 237
Query: 295 IAIYPDL 301
P
Sbjct: 238 -PTPPTY 243
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (84), Expect = 0.002
Identities = 29/221 (13%), Positives = 55/221 (24%), Gaps = 49/221 (22%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
S A+ FD D +I E + A +++++ F L ++
Sbjct: 8 YSADAVCFDVDSTVIREEGIDELA---KICGVEDAVSEMTRRAMGGAVPFKAALTERLAL 64
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
+P + + PG+
Sbjct: 65 IQPSREQVQRLIAEQPPHL-------------------------------------TPGI 87
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENL-------IGMERFEGLDCFLAGDDVKQK 237
L+ + +V + S +S V L + AG D Q
Sbjct: 88 RELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQP 147
Query: 238 KPDPSIYVTAAKRL--GISEKDCLVVEDSVIGLQAATRAGM 276
+ K L K +++ D ++A A
Sbjct: 148 TAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADA 188
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 100.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 100.0 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.97 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.97 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.97 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.97 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.97 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.97 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.96 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.96 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.95 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.95 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.94 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.92 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.92 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.9 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.9 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.89 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.86 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.85 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.84 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.83 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.81 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.8 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.8 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.8 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.77 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.76 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.7 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.65 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.64 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.51 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.45 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.42 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.39 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.36 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.28 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.22 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.22 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.17 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.17 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.08 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.02 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.01 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.95 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.8 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.68 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.66 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.38 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.37 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.3 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.19 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.17 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.73 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.52 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.76 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 95.76 | |
| d1xm3a_ | 251 | Thiazole biosynthesis protein ThiG {Bacillus subti | 94.66 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 90.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 90.0 | |
| d2pjua1 | 186 | Propionate catabolism operon regulatory protein Pr | 89.3 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 86.55 | |
| d1wv2a_ | 243 | Thiazole biosynthesis protein ThiG {Pseudomonas ae | 85.68 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 84.58 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 83.76 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 82.47 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.4e-34 Score=235.91 Aligned_cols=214 Identities=22% Similarity=0.368 Sum_probs=164.7
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHH-HHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 144 (320)
.+++||||+||||+|+...+.++|+++++++|++.+.. +.+....+....... .......+.
T Consensus 2 ~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~----- 64 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRR------------NELPDTLGLRIDMVVDLWYARQPWN----- 64 (218)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGG------------GGSCCCTTCCHHHHHHHHHHHSCCS-----
T ss_pred cceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHH------------HHHHHHhCCCccchhhhhhhccccc-----
Confidence 68999999999999999999999999999998865431 112222233322222 223333332
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
........+.........+... ..++||+.++|+.|+++|++++++||+.+..+...++.+ |+..+
T Consensus 65 ------~~~~~~~~~~~~~~~~~~~~~~-----~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-~l~~~-- 130 (218)
T d1te2a_ 65 ------GPSRQEVVERVIARAISLVEET-----RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF-DLRDS-- 130 (218)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHHH-----CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred ------chhHHHHHHHHHHHHHHhhhcc-----ccccchHHHHHHHhhhccccccccccccccccccccccc-ccccc--
Confidence 1222223333333333323222 468999999999999999999999999999999999997 99999
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhh-ccccceecccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD-FKDAIAIYPDLSN 303 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~-l~~~~~~~~~~~~ 303 (320)
|+.++++++++.+||+|++|..+++++|++|++|+||||+.+|+.+|+++|+.+|+|+++....+. ...++.+++++.+
T Consensus 131 F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~e 210 (218)
T d1te2a_ 131 FDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTE 210 (218)
T ss_dssp CSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGG
T ss_pred ccccccccccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhh
Confidence 999999999999999999999999999999999999999999999999999999999876554433 3568889999999
Q ss_pred cChhHHH
Q 020871 304 VRLKDLE 310 (320)
Q Consensus 304 ~~~~~l~ 310 (320)
+++.+|.
T Consensus 211 l~~~~l~ 217 (218)
T d1te2a_ 211 LTAKDLL 217 (218)
T ss_dssp CCHHHHH
T ss_pred CCHhhcC
Confidence 9877764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=2.6e-33 Score=228.78 Aligned_cols=201 Identities=17% Similarity=0.267 Sum_probs=160.1
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
|++|+|+||+||||+|+...+.++|+.++.++|.+... +.+...++... ...+.+.+...
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~~~~~---~~~~~~~~~~~---- 60 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP-------------AQAQKTFPMAA---EQAMTELGIAA---- 60 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH-------------HHHHHHTTSCH---HHHHHHTTCCG----
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhcchh---hhhhhccccch----
Confidence 57999999999999999999999999999999887544 33444444433 34445554431
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
... +.+...+.+.+.+.. ....++||+.++|+.|++ +++++++||+....+...++++ |+..+
T Consensus 61 -------~~~----~~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~-~l~~~-- 123 (207)
T d2hdoa1 61 -------SEF----DHFQAQYEDVMASHY--DQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSY-PFMMR-- 123 (207)
T ss_dssp -------GGH----HHHHHHHHHHHTTCG--GGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTS-GGGGG--
T ss_pred -------hhH----HHHHHHhhhhhcccc--cccccccchhhhhhhhcc-cccccccccccccccccccccc-ccccc--
Confidence 222 223333334443332 235789999999999975 6999999999999999999997 99988
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 302 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~ 302 (320)
|+.++++++.+.+||+|++|..+++++|++|++|+||||+.+|+.+|+++|+.+|++.+|.....++..+++++.++.
T Consensus 124 f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~ 201 (207)
T d2hdoa1 124 MAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPL 201 (207)
T ss_dssp EEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGG
T ss_pred ccccccccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHH
Confidence 999999999999999999999999999999999999999999999999999999999988887777766666665543
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=3.8e-32 Score=223.96 Aligned_cols=215 Identities=23% Similarity=0.379 Sum_probs=164.7
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHH-hcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFK-EHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~ 144 (320)
|+|+|+||+||||+|+...+.+++.+++.++|++... .+......+.+.......+. ..+.
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~------ 62 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVD------------RQFNEQLKGVSREDSLQKILDLADK------ 62 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCC------------HHHHTTTTTCCHHHHHHHHHTTSSS------
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCCh------------HHHHHHHhhccchhhhhhccccccc------
Confidence 6899999999999999999999999999999887544 11222233444433332222 2221
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
....+. ...+...+.+.|...+.. ....++||+.++|+.|++.|++++++||+.. ....++.. ++..+
T Consensus 63 ---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~-~l~~~- 131 (221)
T d1o08a_ 63 ---KVSAEE----FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERM-NLTGY- 131 (221)
T ss_dssp ---CCCHHH----HHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT-TCGGG-
T ss_pred ---cchhhh----hhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhh-ccccc-
Confidence 112222 233344444555544322 2357899999999999999999999999755 46677776 99999
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
|+.++++++.+.+||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|+|+++. .......+++++.+
T Consensus 132 -f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~----~~~~~~~~~~~~~~ 206 (221)
T d1o08a_ 132 -FDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE----DLGDDIVIVPDTSH 206 (221)
T ss_dssp -CSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH----HHCSSSEEESSGGG
T ss_pred -cccccccccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh----hcccccEEcCCccc
Confidence 9999999999999999999999999999999999999999999999999999999997653 33456678899999
Q ss_pred cChhHHHHHHH
Q 020871 304 VRLKDLELLLQ 314 (320)
Q Consensus 304 ~~~~~l~~~l~ 314 (320)
.++++|.+++.
T Consensus 207 ~~~~~l~el~~ 217 (221)
T d1o08a_ 207 YTLEFLKEVWL 217 (221)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999999764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=100.00 E-value=1.7e-32 Score=226.26 Aligned_cols=219 Identities=20% Similarity=0.234 Sum_probs=160.9
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHh-cCCCCccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSSTI 143 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 143 (320)
.++|+|+||+||||+|+...+..++.++++++|.+... .+.++...+............ ....
T Consensus 2 ~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~---- 65 (224)
T d2hsza1 2 TQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS------------ENLVMTWIGNGADVLSQRAVDWACKQ---- 65 (224)
T ss_dssp SSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHHHH----
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCc------------HHHHHHHhhhhhhhhhhhhhhhhhhh----
Confidence 46999999999999999999999999999999986544 233444444444332211111 0000
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
. ....... ..+.........+.. .......++||+.++|..|++.|++++++||+....+...++.+ |+..+
T Consensus 66 ~-~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~-gl~~~- 137 (224)
T d2hsza1 66 A-EKELTED----EFKYFKRQFGFYYGE-NLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF-GIDHL- 137 (224)
T ss_dssp H-TCCCCHH----HHHHHHHHHHHHHHH-HTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG-
T ss_pred h-hhhhhHH----HHHHHHHHHHHHHHH-hhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhc-Cchhh-
Confidence 0 0001111 111111222222222 22345689999999999999999999999999999999999997 99999
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc--ccceecccc
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK--DAIAIYPDL 301 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~--~~~~~~~~~ 301 (320)
|+.++++++.+..||+|++|..++++++++|++|+||||+.+|+++|+++|+.+|++.++......+. .+++++.+
T Consensus 138 -f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~- 215 (224)
T d2hsza1 138 -FSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD- 215 (224)
T ss_dssp -CSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS-
T ss_pred -ccccccccccccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC-
Confidence 99999999999999999999999999999999999999999999999999999999998877655553 34455544
Q ss_pred cccChhHHHHHH
Q 020871 302 SNVRLKDLELLL 313 (320)
Q Consensus 302 ~~~~~~~l~~~l 313 (320)
+.||.+++
T Consensus 216 ----l~dL~~ii 223 (224)
T d2hsza1 216 ----FADILKIT 223 (224)
T ss_dssp ----GGGGGGGT
T ss_pred ----HHHHHHhh
Confidence 55555544
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.97 E-value=6.8e-32 Score=227.69 Aligned_cols=230 Identities=18% Similarity=0.272 Sum_probs=158.7
Q ss_pred CccEEEEecCCccccchHH-HHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhc-CCC--Cc
Q 020871 66 SLQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEH-GWP--SS 141 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~--~~ 141 (320)
++|+|+||+||||+|+... ...++.+++.++|+..+. ++++..+|.........+... .+. ..
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITA-------------EEARKPMGLLKIDHVRALTEMPRIASEWN 67 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCH-------------HHHHTTTTSCHHHHHHHHHHSHHHHHHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCcHHHHHHHHhhhhhhhHHHH
Confidence 5899999999999998653 467889999999887544 233333333222111111000 000 00
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.++.. .....+ .+.+...+.+.+...+. ....++||+.++|+.|+++|++++++||++.......++.+ |+..
T Consensus 68 ~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~-~l~~ 140 (257)
T d1swva_ 68 RVFRQ-LPTEAD----IQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA-ALQG 140 (257)
T ss_dssp HHHSS-CCCHHH----HHHHHHHHHHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHH-HHTT
T ss_pred HHhcc-cCCHHH----HHHHHHHHHHHHHHHhh-ccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHH-hhcc
Confidence 00000 011111 23333444444544432 33579999999999999999999999999999999999997 8888
Q ss_pred ccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC-CCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc----hhhcccc--
Q 020871 222 FEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYTSSTA----EQDFKDA-- 294 (320)
Q Consensus 222 ~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~-~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~----~~~l~~~-- 294 (320)
++ +|.++++++++.+||+|++|..+++++|+. +++|+||||+.+|+.+|+++|+.+|+|.+|... .+++...
T Consensus 141 ~f-~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~ 219 (257)
T d1swva_ 141 YK-PDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDS 219 (257)
T ss_dssp CC-CSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCH
T ss_pred cc-cccccccccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCH
Confidence 71 378899999999999999999999999995 589999999999999999999999999888642 1111100
Q ss_pred --------------ceecccccccChhHHHHHHHHh
Q 020871 295 --------------IAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 295 --------------~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
....+|+...++.||..+|+++
T Consensus 220 ~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 220 VELREKIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 0111555555788899999876
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=5.5e-31 Score=214.36 Aligned_cols=182 Identities=14% Similarity=0.281 Sum_probs=139.9
Q ss_pred cEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhH-HHHHHhcCCCCccccCC
Q 020871 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDN 146 (320)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~ 146 (320)
++++||+||||+|+...+..+|++++.++|++... .++ .....+.+.... ..+....++.
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~------- 62 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDK---------EKV---REFIFKYSVQDLLVRVAEDRNLD------- 62 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCH---------HHH---HHHHHHSCHHHHHHHHHHHHTCC-------
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH---------HHH---HHhhcccccccccccccchhhhh-------
Confidence 58999999999999999999999999999886533 111 222223333332 2333333222
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc
Q 020871 147 PPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226 (320)
Q Consensus 147 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd 226 (320)
.+.+.......+... .....++||+.++|+.|+++|++++|+||+... ....++++ |+..+ |+
T Consensus 63 -----------~~~~~~~~~~~~~~~--~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~-gl~~~--f~ 125 (204)
T d2go7a1 63 -----------VEVLNQVRAQSLAEK--NAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDL-GVESY--FT 125 (204)
T ss_dssp -----------HHHHHHHHHHHHTTC--GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHH-TCGGG--EE
T ss_pred -----------HHHHHHHHHHHHHhh--cccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhc-ccccc--cc
Confidence 112222222222222 233578999999999999999999999998764 56678887 99999 99
Q ss_pred eEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 227 CFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 227 ~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
.++++++++.+||+|++|..+++++|++|++|+||||+.+|+.+|+++|+.+|++.++.
T Consensus 126 ~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~ 184 (204)
T d2go7a1 126 EILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST 184 (204)
T ss_dssp EEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS
T ss_pred cccccccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999997764
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.97 E-value=6.8e-31 Score=217.52 Aligned_cols=218 Identities=14% Similarity=0.226 Sum_probs=161.1
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhc-ccCCCCccccCCCCChhHHHHHHHHhcCCh-hhHHHHHHhcCCCCcccc
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHF-NVRCDPSSQQSLNWDPEFYDVLQNQIGGGK-PKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~ 144 (320)
.|+|+||+||||+|+...+..++.+++.+. +....... . ...+... .....++..+++.
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~----- 62 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGS---H-----------DFSGKMDGAIIYEVLSNVGLE----- 62 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC-----------------CCTTCCHHHHHHHHHHTTTCC-----
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHH---H-----------HHhcCchHHHHHHHHHHhCCC-----
Confidence 578999999999999999999999887764 44332211 0 0111111 1233444554443
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCC-CcEEEEeCCchhhHHHHHHHhhCCcccc
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGMERFE 223 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g-~~i~i~Tn~~~~~~~~~l~~~~~l~~~~ 223 (320)
.......++...+.+...+.+........++||+.++|+.|+++| ++++++||+....+...++.+ |+..+
T Consensus 63 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~-gl~~~- 134 (228)
T d2hcfa1 63 ------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDHY- 134 (228)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT-TCSTT-
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhh-ccccc-
Confidence 122222233444444445555443445678999999999999987 899999999999999999986 99999
Q ss_pred CcceEEeCCCCCCCCCCHHHHHHHHHHc---CCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccc--cceec
Q 020871 224 GLDCFLAGDDVKQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD--AIAIY 298 (320)
Q Consensus 224 ~fd~v~~~~~~~~~KP~~~~~~~~~~~l---~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~--~~~~~ 298 (320)
||.++++++....||+|+.+...++.+ +++|++|+||||+.+|+.+|+++|+.+|+|.++....+++.. +++++
T Consensus 135 -fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi 213 (228)
T d2hcfa1 135 -FPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF 213 (228)
T ss_dssp -CSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE
T ss_pred -ccccccccccccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE
Confidence 999999999999999999888777666 789999999999999999999999999999988877776643 44454
Q ss_pred ccccccChhHHHHHHHHhh
Q 020871 299 PDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 299 ~~~~~~~~~~l~~~l~~~~ 317 (320)
+ ++.||.++|+.++
T Consensus 214 ~-----~~~el~~~l~~l~ 227 (228)
T d2hcfa1 214 K-----NFAETDEVLASIL 227 (228)
T ss_dssp S-----CSCCHHHHHHHHH
T ss_pred C-----CHHHHHHHHHHHh
Confidence 4 5667888888765
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=2.7e-30 Score=211.05 Aligned_cols=209 Identities=14% Similarity=0.233 Sum_probs=155.7
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
.++|+|+||+||||+|+...+..+++++++++|++... .+.++...+.+.... +...
T Consensus 2 ~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~---~~~~-------- 58 (210)
T d2ah5a1 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPD------------AKTIRGFMGPPLESS---FATC-------- 58 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCC------------HHHHHHTSSSCHHHH---HHTT--------
T ss_pred CCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHhhhcchhhh---cccc--------
Confidence 46999999999999999999999999999999886543 244555555443322 2211
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
..........+ .+...+.... .....+++|+.++|+.|+.+ ++++++||+........++.+ |+..+
T Consensus 59 ----~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~-gl~~~-- 125 (210)
T d2ah5a1 59 ----LSKDQISEAVQ----IYRSYYKAKG-IYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNL-EIHHF-- 125 (210)
T ss_dssp ----SCGGGHHHHHH----HHHHHHHHTG-GGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHT-TCGGG--
T ss_pred ----ccchhhHHHHH----HHHHHHHhhh-hhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhh-ccccc--
Confidence 11122222222 2222222221 23457899999999999977 589999999999999999997 99999
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 304 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 304 (320)
|+.++++++. +||+|++|..+++++|++|++|+||||+.+|+.+|+++|+++++|.+|....+++... .|++..-
T Consensus 126 fd~v~~~~~~--~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~---~pd~vi~ 200 (210)
T d2ah5a1 126 FDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNY---QPDYIAH 200 (210)
T ss_dssp CSEEEEECSS--CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTT---CCSEEES
T ss_pred cccccccccc--ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhC---CCCEEEC
Confidence 9999988776 5777889999999999999999999999999999999999999999887776666432 1334344
Q ss_pred ChhHHHHHHH
Q 020871 305 RLKDLELLLQ 314 (320)
Q Consensus 305 ~~~~l~~~l~ 314 (320)
++.||.++||
T Consensus 201 ~l~el~~~le 210 (210)
T d2ah5a1 201 KPLEVLAYFQ 210 (210)
T ss_dssp STTHHHHHTC
T ss_pred CHHHHHHHhC
Confidence 4666666654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=3.6e-30 Score=206.66 Aligned_cols=181 Identities=14% Similarity=0.217 Sum_probs=139.1
Q ss_pred CCccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCcccc
Q 020871 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (320)
|++|+|+||+||||+|+...+..+|.+++.++|+.... +.+...++....... +......
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~~~~~~~~---~~~~~~~---- 60 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDH-------------DSVYQALKVSTPFAI---ETFAPNL---- 60 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHHHHCHHHHH---HHHCTTC----
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccH-------------HHHHhhhhccchhhh---hhhhHHH----
Confidence 67999999999999999999999999999999886533 233333443332222 2221110
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
+.+.+.+.+.+...+ ....++||+.++|+.|++.|++++++||+..... ..++++ ++..+
T Consensus 61 --------------~~~~~~~~~~~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~-~l~~~-- 120 (187)
T d2fi1a1 61 --------------ENFLEKYKENEAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKT-SIAAY-- 120 (187)
T ss_dssp --------------TTHHHHHHHHHHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHT-TCGGG--
T ss_pred --------------HHHHHHHHHHHHHHh--hcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhh-ccccc--
Confidence 111122233333332 3467899999999999999999999999877655 578886 99988
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 287 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~ 287 (320)
||.++++++++..||+|++|..+++++++ ++|+||||+..|+++|+++|+.+++++++...
T Consensus 121 fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~ 181 (187)
T d2fi1a1 121 FTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNL 181 (187)
T ss_dssp EEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHH
T ss_pred cccccccccccccCCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCCh
Confidence 99999999999999999999999999986 56999999999999999999999999775443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.97 E-value=6.1e-30 Score=212.06 Aligned_cols=130 Identities=17% Similarity=0.315 Sum_probs=114.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
..++||+.++|+.|++ |++++++||++.......++.+ |+.++ ||.++++++++..||+|++|..+++++|++|++
T Consensus 99 ~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~-gl~~~--fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~ 174 (230)
T d1x42a1 99 GELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDAL-GIKDL--FDSITTSEEAGFFKPHPRIFELALKKAGVKGEE 174 (230)
T ss_dssp CCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHH-TCGGG--CSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGG
T ss_pred CcccccHHHHHHHhhc-cCceeeeeccccccchhhhccc-ccccc--cccccccccccccchhhHHHHHHHhhhcccccc
Confidence 5789999999999974 7999999999999999999987 99999 999999999999999999999999999999999
Q ss_pred EEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHh
Q 020871 258 CLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 258 ~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
|+||||+. +|+.+|+++|+.+|+++++.........+++++ -++.||.++|+++
T Consensus 175 ~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i-----~~l~el~~~l~~l 229 (230)
T d1x42a1 175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV-----SDLREVIKIVDEL 229 (230)
T ss_dssp EEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE-----SSTTHHHHHHHHH
T ss_pred cceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE-----CCHHHHHHHHHHc
Confidence 99999996 799999999999999988766555444444444 4577888888875
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=2.9e-29 Score=210.03 Aligned_cols=134 Identities=19% Similarity=0.338 Sum_probs=112.6
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
...++||+.++|+.|++ |++++++||++.......++.. |+..+ ||.++++++++.+||+|++|..+++++|++|+
T Consensus 107 ~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~-gl~~~--fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~ 182 (247)
T d2gfha1 107 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC-ACQSY--FDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPG 182 (247)
T ss_dssp TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHH-TCGGG--CSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGG
T ss_pred cCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhc-ccccc--ccccccccccccchhhhhhHHHHHHHhhcCHH
Confidence 35799999999999985 7999999999999889889997 99999 99999999999999999999999999999999
Q ss_pred CEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhh
Q 020871 257 DCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 257 ~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
+|+||||+. +|+.+|+++|+.++++..+..... ......|++...++.||.++|+++-
T Consensus 183 ~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~---~~~~~~p~~~i~~l~eL~~ll~~i~ 241 (247)
T d2gfha1 183 DCVMVGDTLETDIQGGLNAGLKATVWINKSGRVP---LTSSPMPHYMVSSVLELPALLQSID 241 (247)
T ss_dssp GEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCC---SSCCCCCSEEESSGGGHHHHHHHHT
T ss_pred hcceeccChHhHHHHHHHcCCeEEEEECCCCCCc---ccccCCCCEEECCHHHHHHHHHHHh
Confidence 999999997 799999999998554433333221 1233446666667889999998763
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.96 E-value=1.9e-28 Score=201.76 Aligned_cols=211 Identities=23% Similarity=0.368 Sum_probs=153.2
Q ss_pred CccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHH-HHHHhcCCCCcccc
Q 020871 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSSTIF 144 (320)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 144 (320)
.+|+||||+||||+|+...+..+|++++.++|++.+. .+......|.....+. .+....+...
T Consensus 1 ~~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~---- 64 (222)
T d2fdra1 1 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISV------------EEMGERFAGMTWKNILLQVESEASIPL---- 64 (222)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH------------HHHHHHHTTCCHHHHHHHHHHHHCCCC----
T ss_pred CceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCH------------HHHHHHHhhhccccccccccccccccc----
Confidence 4899999999999999999999999999999987543 1222334455544433 3344444321
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccC
Q 020871 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (320)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~ 224 (320)
. .+..+.+...+.+.... ...++||+.++|+.|+. +.+++||+....+...++.+ ++..+
T Consensus 65 -----~----~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~-~l~~~-- 124 (222)
T d2fdra1 65 -----S----ASLLDKSEKLLDMRLER-----DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV-GLKPY-- 124 (222)
T ss_dssp -----C----THHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred -----c----ccchhHHHHHHHHHhhh-----ccchhhhHHHHhhhccc---cceeeeecchhhhhhhhccc-ccccc--
Confidence 1 11222222222222222 25799999999988764 56799999999999999997 99999
Q ss_pred cceEEeC-CC--CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCch----hhcc--ccc
Q 020871 225 LDCFLAG-DD--VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE----QDFK--DAI 295 (320)
Q Consensus 225 fd~v~~~-~~--~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~----~~l~--~~~ 295 (320)
|+.++.+ ++ ....||+|++|..+++++|++|++|+||||+..|+.+|+++|+.+|++.++.... +.+. .++
T Consensus 125 f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad 204 (222)
T d2fdra1 125 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAE 204 (222)
T ss_dssp TTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCS
T ss_pred cceeecccccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCC
Confidence 8765544 32 5678999999999999999999999999999999999999999999998876432 2222 244
Q ss_pred eecccccccChhHHHHHHHHhh
Q 020871 296 AIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 296 ~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
.+++ ++.||.++|+.+.
T Consensus 205 ~vi~-----~l~eL~~ll~~l~ 221 (222)
T d2fdra1 205 TVIS-----RMQDLPAVIAAMA 221 (222)
T ss_dssp EEES-----CGGGHHHHHHHHT
T ss_pred EEEC-----CHHHHHHHHHHhc
Confidence 4444 4677888887654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.95 E-value=2.1e-28 Score=201.12 Aligned_cols=111 Identities=23% Similarity=0.300 Sum_probs=103.2
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
...+++++.++++.+++.|++++++||+........++.. ++..+ ||.++++++.+..||+|++|..+++++|++|+
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~-~~~~~--fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~ 167 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-GLRDG--FDHLLSVDPVQVYKPDNRVYELAEQALGLDRS 167 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEESGGGTCCTTSHHHHHHHHHHHTSCGG
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhc-ccccc--ccceeeeeeeeccccHHHHHHHHHHHhCCCCc
Confidence 3578999999999999999999999999999898888886 99998 99999999999999999999999999999999
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhh
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD 290 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~ 290 (320)
+|+||||+..|+.+|+++||.+|+|+++....+.
T Consensus 168 e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~ 201 (220)
T d1zrna_ 168 AILFVASNAWDATGARYFGFPTCWINRTGNVFEE 201 (220)
T ss_dssp GEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCS
T ss_pred eEEEEecChHhHHHHHHcCCEEEEEcCCCCCccc
Confidence 9999999999999999999999999877665444
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.95 E-value=4.5e-28 Score=202.31 Aligned_cols=135 Identities=21% Similarity=0.285 Sum_probs=114.5
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEK 256 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~ 256 (320)
...++|++.++|..|+ ++.++++||+....+...++.. ++..+ ||.++++++++..||+|++|..+++++|++|+
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~-~~~~~--fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~ 165 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA-GLTDS--FDAVISVDAKRVFKPHPDSYALVEEVLGVTPA 165 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGG
T ss_pred ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhc-ccccc--cccccccccccccCccHHHHHHHHHHhCCChh
Confidence 3578999999999886 5789999999999898888886 99988 99999999999999999999999999999999
Q ss_pred CEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc-------------------cccceecccccccChhHHHHHHHHh
Q 020871 257 DCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-------------------KDAIAIYPDLSNVRLKDLELLLQNV 316 (320)
Q Consensus 257 ~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l-------------------~~~~~~~~~~~~~~~~~l~~~l~~~ 316 (320)
+|+||||+.+|+.+|+++||.+|||+++....... .......||+..-++.||.++|+.+
T Consensus 166 e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 166 EVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp GEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHH
T ss_pred hEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHHHhh
Confidence 99999999999999999999999998764321110 0111235777778899999999864
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.5e-25 Score=184.77 Aligned_cols=125 Identities=19% Similarity=0.185 Sum_probs=103.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEe-CCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA-GDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~-~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
...++||+.++|..|+++|++++++||+........++.. ++..+ |+.... .++....||+|++|..+++++|++|
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~-~~~~~--~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p 201 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS-TEGDI--LELVDGHFDTKIGHKVESESYRKIADSIGCST 201 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB-TTBCC--GGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHc-Ccchh--hhhcceeeccccccCCCcHHHHHHHHHhCCCc
Confidence 4568999999999999999999999999999888888876 88877 564433 3556779999999999999999999
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCch--hhccccceeccccccc
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAE--QDFKDAIAIYPDLSNV 304 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~--~~l~~~~~~~~~~~~~ 304 (320)
++|+||||+.+|+.+|+++||.+|+|++++... +....+..++.++.++
T Consensus 202 ~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 202 NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred CcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 999999999999999999999999998764432 2223455667776654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.92 E-value=2.8e-26 Score=188.41 Aligned_cols=111 Identities=16% Similarity=0.210 Sum_probs=97.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch----hhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK----SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI 253 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~----~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~ 253 (320)
..++||+.++|..|+++|++++++||+.. ......+... ++..+ ||.++++++++.+||+|++|..+++++|+
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~-~l~~~--fd~i~~s~~~~~~KP~p~~~~~~~~~~~v 172 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMC-ELSQH--FDFLIESCQVGMIKPEPQIYNFLLDTLKA 172 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHH-HHGGG--CSEEEEHHHHSCCTTCHHHHHHHHHHHTS
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhc-ChHhh--hceeeehhhccCCCCChHHHHHHHHHhCC
Confidence 57899999999999999999999998643 2234444554 88999 99999999999999999999999999999
Q ss_pred CCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhc
Q 020871 254 SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 291 (320)
Q Consensus 254 ~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l 291 (320)
+|++|+||||+..|+.+|+++||.+|+|.++....++|
T Consensus 173 ~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el 210 (222)
T d1cr6a1 173 KPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALREL 210 (222)
T ss_dssp CTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHH
T ss_pred CcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHH
Confidence 99999999999999999999999999998876654444
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=5e-25 Score=180.66 Aligned_cols=109 Identities=18% Similarity=0.212 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHH----HHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI----LCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGI 253 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~----~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~ 253 (320)
..++||+.++|..|+++|++++++||....... ..... .++..+ ||.++++++++.+||+|++|..+++++|+
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-~~~~~~--fd~i~~s~~~~~~KP~~~~~~~~~~~~~~ 174 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMH--FDFLIESCQVGMVKPEPQIYKFLLDTLKA 174 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTT--SSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-cChHhh--ccEEEeccccccchhHHHHHHHHhhhccc
Confidence 479999999999999999999999997654332 22233 367777 99999999999999999999999999999
Q ss_pred CCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchh
Q 020871 254 SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 289 (320)
Q Consensus 254 ~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~ 289 (320)
+|++|+||||+..|+.+|+++|+.+|+|+++....+
T Consensus 175 ~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~~~ 210 (225)
T d1zd3a1 175 SPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALK 210 (225)
T ss_dssp CGGGEEEEESCHHHHHHHHHTTCEEEECSSHHHHHH
T ss_pred CccceeEEecCHHHHHHHHHcCCEEEEECCcchhHH
Confidence 999999999999999999999999999987654333
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=5.8e-25 Score=176.29 Aligned_cols=111 Identities=21% Similarity=0.353 Sum_probs=99.2
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
....+++|+.+++..++..|++++++||+........+....++..+ |+.++++++.+.+||+|++|..+++++|++|
T Consensus 81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~ 158 (197)
T d2b0ca1 81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDLGMRKPEARIYQHVLQAEGFSP 158 (197)
T ss_dssp CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhh--ccceeecccccccccchHHHHHHHHhcCCCC
Confidence 33578999999999999999999999999877666666654478888 9999999999999999999999999999999
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEEEEeCCCCch
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 288 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~ 288 (320)
++|+||||+.+|+++|+++|+.+|+|+++....
T Consensus 159 ~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~ 191 (197)
T d2b0ca1 159 SDTVFFDDNADNIEGANQLGITSILVKDKTTIP 191 (197)
T ss_dssp GGEEEEESCHHHHHHHHTTTCEEEECCSTTHHH
T ss_pred CeEEEEeCCHHHHHHHHHcCCEEEEECCCCCCH
Confidence 999999999999999999999999998775443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=7.9e-24 Score=165.49 Aligned_cols=102 Identities=13% Similarity=0.192 Sum_probs=89.1
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEeCCchhh-HHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS-VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~-~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
.+.++||+.++|+.|+++|++++|+||+.... ....++.+ ++..+ |+.+..+ .||+|+.|..+++++|++|
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~-~~~~~--~~~~~~~-----~kp~~~~~~~~~~~~~~~~ 115 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELF-DLGKY--FIQREIY-----PGSKVTHFERLHHKTGVPF 115 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHT-TCGGG--CSEEEES-----SSCHHHHHHHHHHHHCCCG
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcc-ccccc--ceeeecc-----cCCChHHHHHHHHHhCCCh
Confidence 35899999999999999999999999887654 44455664 88887 7776543 6899999999999999999
Q ss_pred CCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 256 KDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 256 ~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
++|+||||+..|+++|+++|+.+|+|.+|..
T Consensus 116 ~~~l~igD~~~di~aA~~aG~~~i~v~~G~~ 146 (164)
T d1u7pa_ 116 SQMVFFDDENRNIIDVGRLGVTCIHIRDGMS 146 (164)
T ss_dssp GGEEEEESCHHHHHHHHTTTCEEEECSSCCC
T ss_pred HHEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999999988764
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=8.8e-23 Score=167.33 Aligned_cols=118 Identities=15% Similarity=0.310 Sum_probs=87.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHH-----------HHhhCCccccCcceEEeCCCCCCCCCCHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL-----------ENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVT 246 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l-----------~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~ 246 (320)
..+++++.+++. .+..+++.++.......... +. .|+..+ |+.+++++.. ..||+|++|..
T Consensus 96 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~--Fd~v~~~~~~-~~KP~p~~f~~ 167 (225)
T d2g80a1 96 APVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDS-LDLNSY--IDGYFDINTS-GKKTETQSYAN 167 (225)
T ss_dssp BCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCC-BCCGGG--CCEEECHHHH-CCTTCHHHHHH
T ss_pred ccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHh-cCCccc--cceeeecccc-CCCCChhHhHH
Confidence 356777777654 44678888887765443332 22 277777 8998887554 47999999999
Q ss_pred HHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccc
Q 020871 247 AAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 303 (320)
Q Consensus 247 ~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 303 (320)
+++++|++|++|+||||+.+|+.+|+++|+.+|+|++++.....-..+..++.++.+
T Consensus 168 ~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~e 224 (225)
T d2g80a1 168 ILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFET 224 (225)
T ss_dssp HHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTT
T ss_pred HHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhh
Confidence 999999999999999999999999999999999998765443322334445566554
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.86 E-value=2e-21 Score=156.84 Aligned_cols=131 Identities=29% Similarity=0.362 Sum_probs=92.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch---------------hhHHHHHHHhhCCccccCcceEEeCC----------
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLAGD---------- 232 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---------------~~~~~~l~~~~~l~~~~~fd~v~~~~---------- 232 (320)
++++||+.++|+.|+++|++++|+||... ..+...++.. |+. ++.++.+.
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~-g~~----~~~~~~~~~~~~~~~~~~ 121 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE-GVF----VDMVLACAYHEAGVGPLA 121 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT-TCC----CSEEEEECCCTTCCSTTC
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhc-ccc----cceEEEeccccccccccc
Confidence 47999999999999999999999999531 1122223332 321 33333221
Q ss_pred --CCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc-ChhHH
Q 020871 233 --DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV-RLKDL 309 (320)
Q Consensus 233 --~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~-~~~~l 309 (320)
+....||+|.++..+++++|+++++|+||||+.+|+++|++||+.++++..+....+. .....++.++ .+.+|
T Consensus 122 ~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~----~~~~~~~~~~~e~~dl 197 (209)
T d2o2xa1 122 IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQP----GFAIRPLRDSSELGDL 197 (209)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEET----TEEEEEESSHHHHHHH
T ss_pred ccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccC----CccccCccchhHHHHH
Confidence 2334699999999999999999999999999999999999999999999887654322 2222222222 35566
Q ss_pred HHHHHHhh
Q 020871 310 ELLLQNVV 317 (320)
Q Consensus 310 ~~~l~~~~ 317 (320)
.+.++.+.
T Consensus 198 l~~v~~l~ 205 (209)
T d2o2xa1 198 LAAIETLG 205 (209)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 66666543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=9.4e-21 Score=150.27 Aligned_cols=129 Identities=21% Similarity=0.256 Sum_probs=93.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchh---------------hHHHHHHHhhCCccccCcceEEeC-----------
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKS---------------SVILCLENLIGMERFEGLDCFLAG----------- 231 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~---------------~~~~~l~~~~~l~~~~~fd~v~~~----------- 231 (320)
++++||+.++|+.|++.|++++++||...- .....+... ++. + .+..+|.
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~--~~~~~cp~~p~~~~~~~~ 101 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR-DVD-L--DGIYYCPHHPQGSVEEFR 101 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT-TCC-C--SEEEEECCBTTCSSGGGB
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhh-ccc-c--cceeeccccccccccccc
Confidence 479999999999999999999999997631 111122222 332 1 2334443
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeE-EEEeCCCCchhhcc-ccceecccccccChhHH
Q 020871 232 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDFK-DAIAIYPDLSNVRLKDL 309 (320)
Q Consensus 232 ~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~-v~v~~~~~~~~~l~-~~~~~~~~~~~~~~~~l 309 (320)
.+...+||+|.++..+++++++++++++||||+.+|+++|++||+.+ +++.++....+... .+++++.+ +.||
T Consensus 102 ~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~-----l~dl 176 (182)
T d2gmwa1 102 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS-----LADL 176 (182)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC-----GGGH
T ss_pred ccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC-----HHHH
Confidence 23456899999999999999999999999999999999999999964 67777765544332 35555544 6677
Q ss_pred HHHHHH
Q 020871 310 ELLLQN 315 (320)
Q Consensus 310 ~~~l~~ 315 (320)
.++|++
T Consensus 177 ~~~ikk 182 (182)
T d2gmwa1 177 PQAIKK 182 (182)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 777653
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=5.8e-22 Score=153.38 Aligned_cols=108 Identities=16% Similarity=0.221 Sum_probs=79.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCc--------h-------hhHHHHHHHhhCCcccc-CcceEEeCCCCCCCCCCH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT--------K-------SSVILCLENLIGMERFE-GLDCFLAGDDVKQKKPDP 241 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~--------~-------~~~~~~l~~~~~l~~~~-~fd~v~~~~~~~~~KP~~ 241 (320)
+.++||+.++|+.|++.|++++++||.+ . ..+...+... |+..-. .|+..+..++....||+|
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~i~~~~~~~~~~~~~~KP~p 107 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQ-GVQFDEVLICPHLPADECDCRKPKV 107 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHT-TCCEEEEEEECCCGGGCCSSSTTSS
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhcccc-ccccceeeecccccccccccccccc
Confidence 4799999999999999999999999964 1 1123334443 443200 012222335567789999
Q ss_pred HHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCC
Q 020871 242 SIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 242 ~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
.++..+++++|++|++|+||||+..|+++|++||+.+++++....
T Consensus 108 ~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~~ 152 (161)
T d2fpwa1 108 KLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETL 152 (161)
T ss_dssp GGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTB
T ss_pred HHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCCC
Confidence 999999999999999999999999999999999999999977643
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.83 E-value=3.4e-21 Score=158.24 Aligned_cols=99 Identities=15% Similarity=0.113 Sum_probs=81.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcce---EEeCC----------CCCCCCCCHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC---FLAGD----------DVKQKKPDPSIY 244 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~---v~~~~----------~~~~~KP~~~~~ 244 (320)
++++||+.++++.|++.|++++++||+....++.+++++ ++..+ |.+ .+..+ .....+|++...
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l-~~~~~--~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 150 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI-VEKDR--IYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK 150 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT-SCGGG--EEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHc-CCccc--eeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence 579999999999999999999999999999999999886 66554 321 11111 122346777789
Q ss_pred HHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEE
Q 020871 245 VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 245 ~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
..+++++++++++|+||||+.+|+.||++||+.++
T Consensus 151 ~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a 185 (226)
T d2feaa1 151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 185 (226)
T ss_dssp HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred HHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEE
Confidence 99999999999999999999999999999997654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=6.2e-20 Score=149.71 Aligned_cols=125 Identities=14% Similarity=0.094 Sum_probs=84.9
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc--------eEEeCCCCC----CCCCCHHH
Q 020871 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--------CFLAGDDVK----QKKPDPSI 243 (320)
Q Consensus 176 ~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd--------~v~~~~~~~----~~KP~~~~ 243 (320)
....++||+.++++.|+++|++++++|++....++.+++.+ |++..+.+. ..+.+.... ..+.+...
T Consensus 79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~l-gi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~ 157 (217)
T d1nnla_ 79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKL-NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKV 157 (217)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHH
T ss_pred hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHh-CCcccceeeeeeeeeehhccccceeeeeeeccchHHHH
Confidence 45679999999999999999999999999999999999987 887431111 111111111 11113344
Q ss_pred HHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccccccc
Q 020871 244 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 304 (320)
Q Consensus 244 ~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 304 (320)
...+++. .++++|++|||+.+|+.|++.||+.++ ++...........+++++.++.++
T Consensus 158 v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~va-~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 158 IKLLKEK--FHFKKIIMIGDGATDMEACPPADAFIG-FGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp HHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEEE-ECSSCCCHHHHHHCSEEESCGGGG
T ss_pred HHHHHhc--cCccccEEEEeCHhhHHHHHhCCceEE-ECCCHHHHHHHHhCCCEeCCHHHh
Confidence 5555444 457899999999999999999998754 443222223334567777776553
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.80 E-value=1.8e-19 Score=151.21 Aligned_cols=79 Identities=22% Similarity=0.392 Sum_probs=67.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
..+||+|.+|..+++++|++|++|+||||++ +|+.+|+++||.+|||.+|....+.+.... ..||+..-++.||.++|
T Consensus 182 ~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~-~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 182 IAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAE-TKPDFVFKNLGELAKAV 260 (261)
T ss_dssp ECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCS-SCCSEEESSHHHHHHHH
T ss_pred ccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcC-CCCCEEECCHHHHHHHh
Confidence 4579999999999999999999999999997 599999999999999999887766654332 34677777788888877
Q ss_pred H
Q 020871 314 Q 314 (320)
Q Consensus 314 ~ 314 (320)
+
T Consensus 261 ~ 261 (261)
T d1vjra_ 261 Q 261 (261)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=4.3e-20 Score=154.04 Aligned_cols=80 Identities=18% Similarity=0.368 Sum_probs=65.7
Q ss_pred cceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhccc----cceecc
Q 020871 225 LDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKD----AIAIYP 299 (320)
Q Consensus 225 fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~~----~~~~~~ 299 (320)
++.....+.+..+||+|++|..+++++|++|++|+||||++ +|+++|+++||.+|+|.+|....+.+.. ++++++
T Consensus 163 ~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~ 242 (250)
T d2c4na1 163 IEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp HHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred HHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEEC
Confidence 34444456667889999999999999999999999999998 5999999999999999998887777653 356666
Q ss_pred ccccc
Q 020871 300 DLSNV 304 (320)
Q Consensus 300 ~~~~~ 304 (320)
++.++
T Consensus 243 sl~eL 247 (250)
T d2c4na1 243 SVAEI 247 (250)
T ss_dssp SGGGC
T ss_pred CHHHh
Confidence 65554
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.80 E-value=3e-21 Score=161.45 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=78.7
Q ss_pred HHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhC---CccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEE
Q 020871 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG---MERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVV 261 (320)
Q Consensus 185 ~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~---l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~V 261 (320)
...+..+...+....|+||.+........ ...+ +..+ +......+....+||+|.+|..+++++|++|++|+||
T Consensus 127 ~~~~~~~~~~~~~~~i~tn~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mI 203 (253)
T d1wvia_ 127 KLTLATLAIQKGAVFIGTNPDLNIPTERG-LLPGAGAILFL--LEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMV 203 (253)
T ss_dssp HHHHHHHHHHTTCEEEESCCCSEEEETTE-EEECHHHHHHH--HHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEE
T ss_pred HHHHHhhhhhhccccccCCCCceeEcCCc-ccccCCcchhc--ccccccceeEEeccCCcccceehhhhccccccceEEE
Confidence 34444445555677788987542211000 0001 0011 1222233444567999999999999999999999999
Q ss_pred ecCHh-hHHHHHHcCCeEEEEeCCCCchhhccc----cceecccccccC
Q 020871 262 EDSVI-GLQAATRAGMACVITYTSSTAEQDFKD----AIAIYPDLSNVR 305 (320)
Q Consensus 262 GD~~~-Dv~~a~~aG~~~v~v~~~~~~~~~l~~----~~~~~~~~~~~~ 305 (320)
||++. |+.+|+++||.+|+|.+|....+++.. ++++++++.|++
T Consensus 204 GDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~ 252 (253)
T d1wvia_ 204 GDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD 252 (253)
T ss_dssp ESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred cCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence 99985 999999999999999998776665543 366677666654
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.77 E-value=2.2e-18 Score=139.07 Aligned_cols=116 Identities=22% Similarity=0.214 Sum_probs=92.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeC----------CCCCCCCCCHHHHHHH
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG----------DDVKQKKPDPSIYVTA 247 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~----------~~~~~~KP~~~~~~~~ 247 (320)
..+++|+.+++..++..|+.++++|+..........+.. +...+ +...+.. .....+++++..+..+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL-GLDYA--FANRLIVKDGKLTGDVEGEVLKENAKGEILEKI 150 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEEEETTEEEEEEECSSCSTTHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhcc-chhhh--hhhhhccccccccccccccccccccccchhhhH
Confidence 579999999999999999999999999888888777776 66655 4433332 2244567788899999
Q ss_pred HHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceeccc
Q 020871 248 AKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 300 (320)
Q Consensus 248 ~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 300 (320)
++++++.++++++|||+.||+.|++.||++.++ + + .+...+.+++++++
T Consensus 151 ~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-n-a--~~~lk~~Ad~vi~~ 199 (210)
T d1j97a_ 151 AKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-C-A--KPILKEKADICIEK 199 (210)
T ss_dssp HHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-S-C--CHHHHTTCSEEECS
T ss_pred HHHhcccccceEEecCCcChHHHHHHCCCCEEE-C-C--CHHHHHhCCEEEcC
Confidence 999999999999999999999999999998665 3 2 22333567887764
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.76 E-value=7.5e-19 Score=146.70 Aligned_cols=80 Identities=16% Similarity=0.251 Sum_probs=65.5
Q ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCH-hhHHHHHHcCCeEEEEeCCCCchhhcc----ccceeccc
Q 020871 226 DCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPD 300 (320)
Q Consensus 226 d~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~ 300 (320)
+.++.+.....+||+|++|.++++++|++|++|+||||++ +|+++|+++|+.+++|.+|....+.+. .+++++++
T Consensus 168 ~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 168 ETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp HHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred cccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECC
Confidence 3344455566789999999999999999999999999997 599999999999999988766544432 35788888
Q ss_pred ccccC
Q 020871 301 LSNVR 305 (320)
Q Consensus 301 ~~~~~ 305 (320)
+.+++
T Consensus 248 l~e~~ 252 (253)
T d1yv9a1 248 LDEWT 252 (253)
T ss_dssp GGGCC
T ss_pred HHHcC
Confidence 77765
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.70 E-value=2e-17 Score=145.73 Aligned_cols=134 Identities=23% Similarity=0.358 Sum_probs=108.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCC-----------CCCCCCCHHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDD-----------VKQKKPDPSIYVTA 247 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~-----------~~~~KP~~~~~~~~ 247 (320)
.+++|+.++|+.|+++|++++++||.........++++ |+..++..+.++++++ ....||+|+.|..+
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~l-gl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL-GLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 35679999999999999999999999999999999997 9998843344555433 46789999999998
Q ss_pred HHHc--------------CCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchh---hcc--ccceecccccccChhH
Q 020871 248 AKRL--------------GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ---DFK--DAIAIYPDLSNVRLKD 308 (320)
Q Consensus 248 ~~~l--------------~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~---~l~--~~~~~~~~~~~~~~~~ 308 (320)
+..+ ++.+++|+||||+.+|+.+|++||+.+|+|.+|....+ ++. .|++++.+ +.+
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~-----~~e 368 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH-----LGE 368 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS-----GGG
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECC-----HHH
Confidence 7654 56789999999999999999999999999987765432 232 46666654 677
Q ss_pred HHHHHHHhhh
Q 020871 309 LELLLQNVVA 318 (320)
Q Consensus 309 l~~~l~~~~~ 318 (320)
|..+|.++++
T Consensus 369 l~~il~~l~~ 378 (380)
T d1qyia_ 369 LRGVLDNLLE 378 (380)
T ss_dssp HHHHHSCTTT
T ss_pred HHHHHHHHHh
Confidence 8899988875
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.65 E-value=5.3e-16 Score=124.47 Aligned_cols=193 Identities=12% Similarity=0.089 Sum_probs=118.5
Q ss_pred ccEEEEecCCccccchHHHHHHHHHHHHhcccCCCCccccCCCCChhHHHHHHHHhcCChhhHHHHHHhcCCCCccccCC
Q 020871 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDN 146 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 146 (320)
+|+|+||+||||++. .|..++.+.|+.....++|++.--.++ +.. -...+...+..
T Consensus 2 mkli~fDlDGTLl~e------~~~~~a~~~Gi~~~~~tgR~~~~~~~~---~~~--------~v~ll~~~~~~------- 57 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE------IWIAFAEKTGIDALKATTRDIPDYDVL---MKQ--------RLRILDEHGLK------- 57 (206)
T ss_dssp CEEEEEESBTTTBCC------HHHHHHHHHTCGGGGCCTTTCCCHHHH---HHH--------HHHHHHHTTCC-------
T ss_pred cEEEEEcCccchHHH------HHHHHHHHcCCHHHHHHCCCCCCHHHH---HHH--------HHHHHHhCCCc-------
Confidence 589999999999984 466777788887655555443211110 000 01112222211
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcc
Q 020871 147 PPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226 (320)
Q Consensus 147 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd 226 (320)
...... . .......++....+..++ .+++.+++|.+...........+ +.... +.
T Consensus 58 ------------------~~~~~~-~--~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~-~~~~~--~~ 112 (206)
T d1rkua_ 58 ------------------LGDIQE-V--IATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQL-GFPTL--LC 112 (206)
T ss_dssp ------------------HHHHHH-H--HTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHT-TCCCE--EE
T ss_pred ------------------eehhhh-h--hhhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHh-CCchh--hc
Confidence 111111 1 244678889888887765 67899999999888787777775 65544 22
Q ss_pred eEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhcc-ccceecccc
Q 020871 227 CFLAGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK-DAIAIYPDL 301 (320)
Q Consensus 227 ~v~~~~~----~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~-~~~~~~~~~ 301 (320)
..+.... .....+.+......++++++++++|++|||+.||+.|.+.||+..++ +.+. +..+ .++++.
T Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~---~v~~~~~~~~~--- 185 (206)
T d1rkua_ 113 HKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPE---NVIREFPQFPA--- 185 (206)
T ss_dssp EEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCH---HHHHHCTTSCE---
T ss_pred ceeeeecccccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCCH---HHHHhCCCcee---
Confidence 2222111 12233445577888999999999999999999999999999999877 4331 2222 223322
Q ss_pred cccChhHHHHHHHHh
Q 020871 302 SNVRLKDLELLLQNV 316 (320)
Q Consensus 302 ~~~~~~~l~~~l~~~ 316 (320)
..+.+||.+.+.+.
T Consensus 186 -~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 186 -VHTYEDLKREFLKA 199 (206)
T ss_dssp -ECSHHHHHHHHHHH
T ss_pred -ecCHHHHHHHHHHH
Confidence 23566777655543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.64 E-value=5.3e-16 Score=118.38 Aligned_cols=105 Identities=13% Similarity=0.078 Sum_probs=74.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhh---HHHHHHHh----hCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENL----IGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRL 251 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~---~~~~l~~~----~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l 251 (320)
.++||+.++|+.|++.|++|+++||..... ....++.. ..+... .++... ....+..+|+......+++.+
T Consensus 36 ~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 36 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV-PLVMQC-QREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC-CCSEEE-ECCTTCCSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCC-cEEEee-cccccccCCchHHHHHHHHHh
Confidence 689999999999999999999999986321 12222221 011111 133333 334445677888888888887
Q ss_pred CCCCCC-EEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 252 GISEKD-CLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 252 ~~~~~~-~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
...+.+ +++|||+..|+++|+++|++|+.|.+|.
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~Gd 148 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASGD 148 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCCC
T ss_pred ccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCCC
Confidence 766655 4678999999999999999999998763
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.51 E-value=2.6e-16 Score=128.58 Aligned_cols=79 Identities=16% Similarity=0.040 Sum_probs=58.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHH
Q 020871 234 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 313 (320)
Q Consensus 234 ~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l 313 (320)
...+.+++..+..+++++|++++++++|||+.||+.|++.+|+.+++ ++..+...+.++++.++. ..+.+.+.+
T Consensus 147 ~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav---~na~~~~k~~A~~v~~~~---~~~gv~~~i 220 (230)
T d1wr8a_ 147 KKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV---AQAPKILKENADYVTKKE---YGEGGAEAI 220 (230)
T ss_dssp ECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHTTCSEECSSC---HHHHHHHHH
T ss_pred eeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEE---CCCCHHHHHhCCEEECCC---CcCHHHHHH
Confidence 45677889999999999999999999999999999999999987554 233344445677776542 233455566
Q ss_pred HHhhh
Q 020871 314 QNVVA 318 (320)
Q Consensus 314 ~~~~~ 318 (320)
++++.
T Consensus 221 ~~~l~ 225 (230)
T d1wr8a_ 221 YHILE 225 (230)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55553
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.45 E-value=1.1e-12 Score=110.29 Aligned_cols=76 Identities=17% Similarity=0.160 Sum_probs=58.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+-.+..++.++++++|++++++++|||+.||+.|.+.+|..+++ +++.++....++++.++..+ +.+.+.|++
T Consensus 210 ~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam---~na~~~~k~~A~~v~~~~~~---~Gv~~~l~~ 283 (285)
T d1nrwa_ 210 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM---GNAREDIKSIADAVTLTNDE---HGVAHMMKH 283 (285)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC---TTCCHHHHHHCSEECCCGGG---THHHHHHHH
T ss_pred ccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe---CCCCHHHHHhCCEEcCCCCc---cHHHHHHHH
Confidence 344567899999999999999999999999999999999988765 33444555678888775443 456666665
Q ss_pred hh
Q 020871 316 VV 317 (320)
Q Consensus 316 ~~ 317 (320)
++
T Consensus 284 ll 285 (285)
T d1nrwa_ 284 LL 285 (285)
T ss_dssp TC
T ss_pred hC
Confidence 53
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.42 E-value=1.2e-12 Score=109.24 Aligned_cols=72 Identities=13% Similarity=0.133 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHHhh
Q 020871 240 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 317 (320)
Q Consensus 240 ~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~~ 317 (320)
+...++.++++++++++++++|||+.||+.|.+.+|..+++ +++..+....++++.++..+ ..+.+.|++++
T Consensus 198 K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am---~na~~~lk~~a~~i~~~~~~---~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 198 KGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV---DNAIPSVKEVANFVTKSNLE---DGVAFAIEKYV 269 (271)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHCSEECCCTTT---THHHHHHHHHT
T ss_pred cccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe---CCCCHHHHHhCCEEcCCCCc---ChHHHHHHHHh
Confidence 34568889999999999999999999999999999988765 33444444567777775443 44666666543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.39 E-value=5.2e-13 Score=111.51 Aligned_cols=78 Identities=10% Similarity=0.129 Sum_probs=61.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
..+-.+...++.+++++|++++++++|||+.||+.|.+.+|..+++ +++.++..+.+++++++..+ ..+..+|+
T Consensus 186 ~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~---~na~~~~k~~A~~i~~~~~~---~Gva~~i~ 259 (267)
T d1nf2a_ 186 PKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM---ENAIEKVKEASDIVTLTNND---SGVSYVLE 259 (267)
T ss_dssp CTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC---TTSCHHHHHHCSEECCCTTT---THHHHHHT
T ss_pred CCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe---CCCCHHHHHhCCEEcCCCCc---cHHHHHHH
Confidence 3444567899999999999999999999999999999999988654 34445555678888776444 56778888
Q ss_pred Hhhh
Q 020871 315 NVVA 318 (320)
Q Consensus 315 ~~~~ 318 (320)
+++.
T Consensus 260 ~ll~ 263 (267)
T d1nf2a_ 260 RIST 263 (267)
T ss_dssp TBCB
T ss_pred HHHh
Confidence 7765
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.36 E-value=3.9e-14 Score=115.39 Aligned_cols=75 Identities=5% Similarity=-0.042 Sum_probs=54.4
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+..+...+..+++++|+++++|++|||+.||+.|++.+|..+++ ++..+...+.++++.+.-. ...+.+++++
T Consensus 148 ~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav---~na~~~~k~~ad~v~~~~~---~~gi~~~l~~ 221 (225)
T d1l6ra_ 148 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP---ANATDNIKAVSDFVSDYSY---GEEIGQIFKH 221 (225)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC---TTSCHHHHHHCSEECSCCT---THHHHHHHHH
T ss_pred CccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE---CCCcHHHHHhCCEEECCCC---cCHHHHHHHH
Confidence 344567789999999999999999999999999999999987654 2233344455666654432 3566666654
Q ss_pred h
Q 020871 316 V 316 (320)
Q Consensus 316 ~ 316 (320)
.
T Consensus 222 ~ 222 (225)
T d1l6ra_ 222 F 222 (225)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.28 E-value=3.9e-12 Score=99.72 Aligned_cols=95 Identities=21% Similarity=0.303 Sum_probs=76.0
Q ss_pred CChhHHHHHHHHHHCCCcEEEEeCCc--------hhh----HHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHH
Q 020871 180 PRPGVLRLMDEAKAAGKKVAVCSAAT--------KSS----VILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTA 247 (320)
Q Consensus 180 ~~~g~~~~l~~L~~~g~~i~i~Tn~~--------~~~----~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~ 247 (320)
++|++.+.|+.|.+.|+.++|+||.. .+. ...+++.+ +.. ++..+|...-..+||.+-++..+
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l-~~~----~~i~~~~~~~~~RKP~~GM~~~~ 125 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKL-GVP----FQVLVATHAGLNRKPVSGMWDHL 125 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHH-TSC----CEEEEECSSSSSSTTSTHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHc-CCC----ccEEEecCccccCCCccHHHHHH
Confidence 57999999999999999999999963 222 23344444 433 35566666677899999999999
Q ss_pred HHHcC----CCCCCEEEEecCH-----------------hhHHHHHHcCCeEE
Q 020871 248 AKRLG----ISEKDCLVVEDSV-----------------IGLQAATRAGMACV 279 (320)
Q Consensus 248 ~~~l~----~~~~~~v~VGD~~-----------------~Dv~~a~~aG~~~v 279 (320)
+++++ ++.++++||||.. .|++.|.++|+...
T Consensus 126 ~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 126 QEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp HHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred HHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 99975 8889999999954 89999999999964
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.22 E-value=1.4e-11 Score=103.10 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=57.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+..+...+..+++.++++++++++|||+.||+.|.+.+|..+++ +++.++....++++.+.-.+- .-+..++++
T Consensus 204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~---~na~~~~k~~a~~v~~~~~~~--g~v~~~l~~ 278 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV---ANATDSAKSHAKCVLPVSHRE--GAVAYLLKK 278 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC---TTCCHHHHHHSSEECSSCTTT--THHHHHHHH
T ss_pred CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe---CCCCHHHHHhCCEEECCcCCC--cHHHHHHHH
Confidence 445667899999999999999999999999999999999988665 334444445667776542221 136677777
Q ss_pred hhh
Q 020871 316 VVA 318 (320)
Q Consensus 316 ~~~ 318 (320)
++.
T Consensus 279 ~~~ 281 (283)
T d2b30a1 279 VFD 281 (283)
T ss_dssp HHT
T ss_pred HHc
Confidence 765
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=1.3e-11 Score=102.79 Aligned_cols=77 Identities=16% Similarity=0.055 Sum_probs=57.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+-.+...+..+++++|++++++++|||+.||+.|.+.+|..+++- ++.++....++++.++..+ +.+.+.|++
T Consensus 187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~---Na~~~lk~~A~~v~~~~~~---~Gva~~i~~ 260 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG---NAAENIKQIARYATDDNNH---EGALNVIQA 260 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT---TCCHHHHHHCSEECCCGGG---THHHHHHHH
T ss_pred CchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC---CCCHHHHHhCCEEcCCCCc---cHHHHHHHH
Confidence 3445678999999999999999999999999999999999997753 3334444677777765443 345566665
Q ss_pred hhh
Q 020871 316 VVA 318 (320)
Q Consensus 316 ~~~ 318 (320)
++.
T Consensus 261 ~l~ 263 (269)
T d1rlma_ 261 VLD 263 (269)
T ss_dssp HHH
T ss_pred HHh
Confidence 553
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.17 E-value=1.1e-10 Score=91.48 Aligned_cols=99 Identities=16% Similarity=0.136 Sum_probs=68.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCch---hhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---SSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGIS 254 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~---~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~ 254 (320)
..+.||+.++++.++++|++|+.+||... +.....|++.+|+..-...+.++.+++ ..|.. -...++++++
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~---rr~~Ik~y~I- 158 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNT---KSQWLQDKNI- 158 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCC---SHHHHHHTTE-
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchH---HHHHHHHcCe-
Confidence 35788999999999999999999999864 333344433236643222334444433 22322 2334466777
Q ss_pred CCCEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 020871 255 EKDCLVVEDSVIGLQAATRAGMACVITYTSS 285 (320)
Q Consensus 255 ~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~ 285 (320)
+++|||..+|+.+|.++|+.+|-+.+..
T Consensus 159 ---~l~~GD~l~Df~aA~eagi~~iRi~r~~ 186 (209)
T d2b82a1 159 ---RIFYGDSDNDITAARDVGARGIRILRAS 186 (209)
T ss_dssp ---EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred ---EEEecCCHHHHhHHHHcCCCceEeeccC
Confidence 7999999999999999999999885543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.17 E-value=3.1e-11 Score=100.05 Aligned_cols=75 Identities=8% Similarity=0.107 Sum_probs=56.2
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHH
Q 020871 235 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 314 (320)
Q Consensus 235 ~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~ 314 (320)
..+-.+...++.+++++|++++++++|||+.||+.|.+.+|..+++ +++.++..+.++++.++..+ +.+.+.|+
T Consensus 182 p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav---~na~~~lk~~A~~vt~~~~~---~Gv~~~l~ 255 (260)
T d2rbka1 182 AKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADYVTAPIDE---DGISKAMK 255 (260)
T ss_dssp STTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCGGG---THHHHHHH
T ss_pred eCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe---CCCCHHHHHhCCEEeCCCCc---cHHHHHHH
Confidence 3445677899999999999999999999999999999999997654 33344444567777665443 35555555
Q ss_pred H
Q 020871 315 N 315 (320)
Q Consensus 315 ~ 315 (320)
+
T Consensus 256 ~ 256 (260)
T d2rbka1 256 H 256 (260)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.08 E-value=3.1e-10 Score=94.54 Aligned_cols=139 Identities=12% Similarity=0.056 Sum_probs=84.1
Q ss_pred hCCCCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeC-----CC-C--CCCCC--C----
Q 020871 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAG-----DD-V--KQKKP--D---- 240 (320)
Q Consensus 175 ~~~~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~-----~~-~--~~~KP--~---- 240 (320)
...+.+.||+.++++.|+++|++++|+|++....++.+++++ |+..- --.+++- ++ . +...| +
T Consensus 131 ~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~l-g~~~~--ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K 207 (291)
T d2bdua1 131 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQA-GVYHS--NVKVVSNFMDFDENGVLKGFKGELIHVFNK 207 (291)
T ss_dssp HSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHT-TCCBT--TEEEEEECEEECTTSBEEEECSSCCCTTCH
T ss_pred hcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHc-CCCcc--CceEEeeEEEEeCCeeEeeccCCccccccC
Confidence 346789999999999999999999999999999999999997 76531 1123331 11 0 00111 1
Q ss_pred HHHHHHHHH--HcCCCCCCEEEEecCHhhHHHHHHcCCe----EEEEeCCCCchhhcccc--ceecccccccChhHHHHH
Q 020871 241 PSIYVTAAK--RLGISEKDCLVVEDSVIGLQAATRAGMA----CVITYTSSTAEQDFKDA--IAIYPDLSNVRLKDLELL 312 (320)
Q Consensus 241 ~~~~~~~~~--~l~~~~~~~v~VGD~~~Dv~~a~~aG~~----~v~v~~~~~~~~~l~~~--~~~~~~~~~~~~~~l~~~ 312 (320)
......... +..-...++|++||+.+|+.||..+... .+++..... .+.+..- .+-+.=..+-+++-...+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~-ee~l~~y~~~~DIVl~~d~~~~v~~~i 286 (291)
T d2bdua1 208 HDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRV-DELLEKYMDSYDIVLVKEESLEVVNSI 286 (291)
T ss_dssp HHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCH-HHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhH-HHHHHHHHhcCCEEEecCCChhHHHHH
Confidence 122222222 2233567899999999999999876432 223322222 2222211 111222344567777777
Q ss_pred HHHhh
Q 020871 313 LQNVV 317 (320)
Q Consensus 313 l~~~~ 317 (320)
|+.++
T Consensus 287 l~~i~ 291 (291)
T d2bdua1 287 LQKTL 291 (291)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 77653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=4.8e-10 Score=90.54 Aligned_cols=31 Identities=13% Similarity=0.039 Sum_probs=27.9
Q ss_pred HHcCCCCCCEEEEecCHhhHHHHHHcCCeEE
Q 020871 249 KRLGISEKDCLVVEDSVIGLQAATRAGMACV 279 (320)
Q Consensus 249 ~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v 279 (320)
+++|++++++++|||+.||+.|.+.+|..++
T Consensus 197 ~~l~i~~~~~iafGD~~NDl~Ml~~a~~~va 227 (232)
T d1xvia_ 197 QQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI 227 (232)
T ss_dssp HHHHSSCCEEEEEESSGGGHHHHHTSSEEEE
T ss_pred HHcCCChhcEEEEcCCHhHHHHHHhCCeEEE
Confidence 4579999999999999999999999998754
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.01 E-value=2.5e-10 Score=93.10 Aligned_cols=44 Identities=7% Similarity=0.003 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHcC-CCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 237 KKPDPSIYVTAAKRLG-ISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 237 ~KP~~~~~~~~~~~l~-~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
+-.+......++++++ ..++++++|||+.||++|.+.+|..+++
T Consensus 177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~ 221 (243)
T d1wzca1 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (243)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe
Confidence 4455678899999985 8889999999999999999999988766
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.95 E-value=1.9e-09 Score=87.97 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
.+.-+......+++++|+++++|++|||+.||+.|.+.+|..+++
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav 203 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV 203 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe
Confidence 344567789999999999999999999999999999999987654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.80 E-value=2.3e-08 Score=76.98 Aligned_cols=112 Identities=13% Similarity=0.178 Sum_probs=84.6
Q ss_pred HHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEecCHh
Q 020871 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 266 (320)
Q Consensus 187 ~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~ 266 (320)
.+..|+..|+.++++|......+....+.+ ++... +. ..+++...+..+++++++++++|+||||+.|
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l-~~~~~------~~-----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~n 107 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIADL-GIKLF------FL-----GKLEKETACFDLMKQAGVTAEQTAYIGDDSV 107 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHH-TCCEE------EE-----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhhh-ccccc------cc-----ccccHHHHHHHHHHHhcCCcceeEEecCCcc
Confidence 466788999999999999888888888776 55432 22 2456677899999999999999999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCCchhhccccceecccccccC-hhHHHHHH
Q 020871 267 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL 313 (320)
Q Consensus 267 Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~l 313 (320)
|+.+.+.+|+.++. +.+..+....++++.+.-...- ++|+-++|
T Consensus 108 Dl~~l~~~g~siap---~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~i 152 (177)
T d1k1ea_ 108 DLPAFAACGTSFAV---ADAPIYVKNAVDHVLSTHGGKGAFREMSDMI 152 (177)
T ss_dssp GHHHHHHSSEEEEC---TTSCHHHHTTSSEECSSCTTTTHHHHHHHHH
T ss_pred HHHHHhhCCeEEEc---CCccHHHHHhCCEEeCCCCCCchHHHHHHHH
Confidence 99999999988654 3444455567777776654433 55555444
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=2.7e-07 Score=72.24 Aligned_cols=91 Identities=20% Similarity=0.271 Sum_probs=60.5
Q ss_pred CCCCChhHHHHHHHHHHCC-CcEEEEeCCchh------hHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHH
Q 020871 177 TVEPRPGVLRLMDEAKAAG-KKVAVCSAATKS------SVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAK 249 (320)
Q Consensus 177 ~~~~~~g~~~~l~~L~~~g-~~i~i~Tn~~~~------~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~ 249 (320)
.++++||+.++++.|++.| +.+.++|..... .-...+++.++-... ...+++. + |-
T Consensus 72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~--~~~~~t~-~----K~---------- 134 (195)
T d1q92a_ 72 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFL--EQIVLTR-D----KT---------- 134 (195)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGG--GGEEECS-C----ST----------
T ss_pred hCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCc--cEEEEcc-c----cc----------
Confidence 4689999999999999865 467788876532 122345554332222 2333332 2 21
Q ss_pred HcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCch
Q 020871 250 RLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 288 (320)
Q Consensus 250 ~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~ 288 (320)
.+.. -++|+|++..++.+..+|+.+++...+++..
T Consensus 135 --~~~~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~ 169 (195)
T d1q92a_ 135 --VVSA--DLLIDDRPDITGAEPTPSWEHVLFTACHNQH 169 (195)
T ss_dssp --TSCC--SEEEESCSCCCCSCSSCSSEEEEECCTTTTT
T ss_pred --eecC--eEEecCcHHHHHHHhcCCCeEEEECCCcccC
Confidence 1111 2789999999999999999999998887764
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.66 E-value=2.9e-07 Score=67.23 Aligned_cols=87 Identities=17% Similarity=0.163 Sum_probs=69.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCE
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDC 258 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~ 258 (320)
.+.|++.+.++.|++.|++++++|+.+......+.+.+ |++.+ ++. -.|+-....++++.-. ..+
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~l-gI~~v------~~~-------~~p~~k~~~v~~~q~~-~~v 85 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV------IAE-------VLPHQKSEEVKKLQAK-EVV 85 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE------ECS-------CCHHHHHHHHHHHTTT-SCE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhh-hhhhh------ccc-------cchhHHHHHHHHHHcC-CEE
Confidence 68999999999999999999999999999888888887 87654 221 2234445556666543 578
Q ss_pred EEEecCHhhHHHHHHcCCeEEE
Q 020871 259 LVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 259 v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
.||||+.||..+.+.+++...+
T Consensus 86 ~~vGDg~nD~~aL~~Advgia~ 107 (135)
T d2b8ea1 86 AFVGDGINDAPALAQADLGIAV 107 (135)
T ss_dssp EEEECSSSSHHHHHHSSEEEEE
T ss_pred EEEeCCCCcHHHHHhCCeeeec
Confidence 8999999999999999988554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.38 E-value=1.4e-07 Score=75.34 Aligned_cols=69 Identities=12% Similarity=0.070 Sum_probs=44.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEEEeCCCCchhhccccceecccccccChhHHHHHHHH
Q 020871 236 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 315 (320)
Q Consensus 236 ~~KP~~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~ 315 (320)
.+-.+..+++.+++ .+++++|||+.||+.|.+.+|..+.+-++ ... ..|.+.+++..+ +.++.+.|+.
T Consensus 156 ~g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~av~~g-~~~----~~A~~~~~~~~e--v~~~l~~l~~ 223 (229)
T d1u02a_ 156 PGVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDALTIKVG-EGE----THAKFHVADYIE--MRKILKFIEM 223 (229)
T ss_dssp TTCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSEEEEES-SSC----CCCSEEESSHHH--HHHHHHHHHH
T ss_pred CCCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeEEEEeC-CCC----ccCeEEcCCHHH--HHHHHHHHHH
Confidence 33444556666653 36899999999999999999876443333 221 356677776554 4556666654
Q ss_pred h
Q 020871 316 V 316 (320)
Q Consensus 316 ~ 316 (320)
+
T Consensus 224 ~ 224 (229)
T d1u02a_ 224 L 224 (229)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=4.1e-08 Score=79.26 Aligned_cols=40 Identities=8% Similarity=-0.180 Sum_probs=30.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEec----CHhhHHHHHHcCCeEEEEeCC
Q 020871 242 SIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 242 ~~~~~~~~~l~~~~~~~v~VGD----~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
.+++++ ++.+++++++||| +.||++|.+.+|..+++++++
T Consensus 188 ~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~ 231 (243)
T d2amya1 188 YCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP 231 (243)
T ss_dssp GGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH
T ss_pred HHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH
Confidence 344444 3678899999999 679999999999777776553
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.30 E-value=3.2e-07 Score=73.69 Aligned_cols=43 Identities=2% Similarity=-0.169 Sum_probs=32.1
Q ss_pred CCHHHHHHHHHHcCCCCCCEEEEecCH----hhHHHHHHcCCeEEEEeCC
Q 020871 239 PDPSIYVTAAKRLGISEKDCLVVEDSV----IGLQAATRAGMACVITYTS 284 (320)
Q Consensus 239 P~~~~~~~~~~~l~~~~~~~v~VGD~~----~Dv~~a~~aG~~~v~v~~~ 284 (320)
.+..+++.++ +.+++++++|||+. ||++|.+.+|..++.|.++
T Consensus 185 sKg~al~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na 231 (244)
T d2fuea1 185 DKRYCLDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP 231 (244)
T ss_dssp STTHHHHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH
T ss_pred cHHHHHHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCH
Confidence 3344566555 35889999999975 9999999999766666543
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.19 E-value=4.9e-06 Score=63.01 Aligned_cols=101 Identities=18% Similarity=0.216 Sum_probs=68.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcccc--CcceEEeCCCCC----------------CCCCC
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE--GLDCFLAGDDVK----------------QKKPD 240 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~--~fd~v~~~~~~~----------------~~KP~ 240 (320)
++.|++.+.++.|++.|+++.++|+.+......+.+++ |+..-. ..+..+.+.+.. ...=.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~-Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI-GIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHc-CCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 57899999999999999999999999999888888887 874320 011111111100 01122
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecCHhhHHHHHHcCCeEEE
Q 020871 241 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 280 (320)
Q Consensus 241 ~~~~~~~~~~l~~~~~~~v~VGD~~~Dv~~a~~aG~~~v~ 280 (320)
|+--..+++.+.-.-..+.|+||+.||..+.+.|.+...+
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~ 138 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 138 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe
Confidence 3333444444433346799999999999999999977543
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.17 E-value=2.6e-06 Score=74.04 Aligned_cols=105 Identities=13% Similarity=0.160 Sum_probs=80.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhh--------CCccccCcceEEeCCC---------------C
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--------GMERFEGLDCFLAGDD---------------V 234 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~--------~l~~~~~fd~v~~~~~---------------~ 234 (320)
+...|++..+|..||+.|.++.++||+.-..+...+..+. .+..+ ||.||+... .
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~l--FDvVIv~A~KP~FF~~~~~~~~v~~ 261 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGL--FEFVITLANKPRFFYDNLRFLSVNP 261 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGT--EEEEEESCCHHHHHHSCCCEEEECT
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHh--ceEEEeCCCCCCccCCCCcceEEeC
Confidence 3457899999999999999999999999999888888776 45566 999887522 0
Q ss_pred CCC------CCC-H-----HHHHHHHHHcCCCCCCEEEEecCH-hhHHHHH-HcCCeEEEEeCC
Q 020871 235 KQK------KPD-P-----SIYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYTS 284 (320)
Q Consensus 235 ~~~------KP~-~-----~~~~~~~~~l~~~~~~~v~VGD~~-~Dv~~a~-~aG~~~v~v~~~ 284 (320)
..+ ++. + -....+.+.+|..-++|+||||+. .||...+ ..||.+++|-..
T Consensus 262 ~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 262 ENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 325 (458)
T ss_dssp TTCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred CCCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence 000 010 0 126677788899989999999999 6988876 579999998554
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.73 E-value=4.1e-05 Score=54.25 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAAT 205 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~ 205 (320)
.+.+++.+.|..|++.|+.|.+.|...
T Consensus 24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 24 LPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 689999999999999999999999874
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.52 E-value=8.8e-05 Score=52.50 Aligned_cols=33 Identities=9% Similarity=0.028 Sum_probs=28.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~ 211 (320)
++.|++.+.|+.|++.|+.|.+.|.........
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~ 53 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDE 53 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHH
Confidence 588999999999999999999999987654433
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.76 E-value=0.077 Score=41.08 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=34.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCc
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~ 220 (320)
+.+.||+.++|+.+++. .+-+|+|.+.++++..+.... |+.
T Consensus 80 ~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~-gfp 120 (308)
T d1y8aa1 80 AKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMI-GVR 120 (308)
T ss_dssp CCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHT-TCC
T ss_pred eeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhc-CCC
Confidence 68999999999999887 888999998888887777665 653
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.76 E-value=0.0015 Score=49.52 Aligned_cols=93 Identities=15% Similarity=0.122 Sum_probs=65.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020871 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKD 257 (320)
Q Consensus 178 ~~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~ 257 (320)
+..+||+.++|+.+.+. +.++|.|.+....+..+++.+ .-... +...+..+.....++ .+..-++.+|-+.++
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~l-dp~~~--~~~~~~r~~c~~~~~---~~~KdL~~l~~~l~~ 126 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL-DKWGA--FRARLFRESCVFHRG---NYVKDLSRLGRDLRR 126 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH-CSSCC--EEEEECGGGSEEETT---EEECCGGGSCSCGGG
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHh-ccCCc--eeEEEEeeeeeecCC---cccccHhhcCCCHHH
Confidence 46899999999999887 999999999999999999987 54444 455544333211111 112234567888899
Q ss_pred EEEEecCHhhHHHHHHcCCe
Q 020871 258 CLVVEDSVIGLQAATRAGMA 277 (320)
Q Consensus 258 ~v~VGD~~~Dv~~a~~aG~~ 277 (320)
+|+|+|++.-...-...|+.
T Consensus 127 vvivDd~~~~~~~~~~N~I~ 146 (181)
T d1ta0a_ 127 VLILDNSPASYVFHPDNAVP 146 (181)
T ss_dssp EEEECSCGGGGTTCGGGBCC
T ss_pred eEEEcCChhhhhcCccCeeE
Confidence 99999999765443344544
|
| >d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: ThiG-like family: ThiG-like domain: Thiazole biosynthesis protein ThiG species: Bacillus subtilis [TaxId: 1423]
Probab=94.66 E-value=0.17 Score=38.84 Aligned_cols=99 Identities=14% Similarity=0.105 Sum_probs=72.7
Q ss_pred CCChhHHHHHH---HHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 020871 179 EPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISE 255 (320)
Q Consensus 179 ~~~~g~~~~l~---~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~ 255 (320)
.++|+..++++ .|-+.|+.+..+++.+.... +.|++. |.......-.-++ .+.+.-++..++.++++.+++
T Consensus 106 ~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v~a-k~Le~~-Gc~avMPlgsPIG---Sg~Gl~n~~~l~~i~~~~~vP- 179 (251)
T d1xm3a_ 106 SLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLA-RKLEEL-GVHAIMPGASPIG---SGQGILNPLNLSFIIEQAKVP- 179 (251)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHH-HHHHHH-TCSCBEECSSSTT---CCCCCSCHHHHHHHHHHCSSC-
T ss_pred CcCCCHHHHHHHHHHHHhCCcEEEEecCCCHHHH-HHHHHc-CChhHHHhhhhhh---cCCCcCChHHHHHHHhcCCcc-
Confidence 57888877776 57788999999999888744 466665 6654321122222 356678899999999997764
Q ss_pred CCEEEEecCH---hhHHHHHHcCCeEEEEeCCCC
Q 020871 256 KDCLVVEDSV---IGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 256 ~~~v~VGD~~---~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
+.|+-+. +|...|-+.|+..|++|+...
T Consensus 180 ---vIvDAGIG~pSdAa~AMElG~daVLvNTAIA 210 (251)
T d1xm3a_ 180 ---VIVDAGIGSPKDAAYAMELGADGVLLNTAVS 210 (251)
T ss_dssp ---BEEESCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred ---EEEecCCCCHHHHHHHHHccCCEEEechhhh
Confidence 6677665 799999999999999987543
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=90.88 E-value=0.037 Score=41.25 Aligned_cols=17 Identities=29% Similarity=0.645 Sum_probs=15.0
Q ss_pred CCccEEEEecCCccccc
Q 020871 65 QSLQALIFDCDGVIIES 81 (320)
Q Consensus 65 ~~~k~viFD~DGTL~d~ 81 (320)
..+|+++||+||||+|.
T Consensus 3 ~~ik~~i~DvDGVlTDG 19 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDG 19 (177)
T ss_dssp GGCCEEEEECTTTTSCS
T ss_pred ccCeEEEEccCCcccCC
Confidence 36899999999999974
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=90.00 E-value=0.1 Score=43.81 Aligned_cols=22 Identities=27% Similarity=0.637 Sum_probs=18.2
Q ss_pred ccEEEEecCCccccchHHHHHH
Q 020871 67 LQALIFDCDGVIIESEHLHRQA 88 (320)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~~ 88 (320)
+|.|+|||||+|++....+...
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s 22 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVS 22 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEeCCcEEEcceeecchH
Confidence 5789999999999998776543
|
| >d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: PrpR receptor domain-like family: PrpR receptor domain-like domain: Propionate catabolism operon regulatory protein PrpR species: Escherichia coli [TaxId: 562]
Probab=89.30 E-value=0.089 Score=39.35 Aligned_cols=88 Identities=18% Similarity=0.246 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEeCCCCCCCCCCHHHHHHHHHHcCCCCCCEEEEe
Q 020871 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVE 262 (320)
Q Consensus 183 g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~~~~~~~~KP~~~~~~~~~~~l~~~~~~~v~VG 262 (320)
++...|...++.+-++++++-.+.......+.++++++- ...... . .-+.+....-++.-|++ ++||
T Consensus 82 Dil~al~~a~~~~~kiavV~~~~~~~~~~~~~~ll~~~i----~~~~~~-~----~~e~~~~v~~l~~~G~~----vVVG 148 (186)
T d2pjua1 82 DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRL----DQRSYI-T----EEDARGQINELKANGTE----AVVG 148 (186)
T ss_dssp HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCE----EEEEES-S----HHHHHHHHHHHHHTTCC----EEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccchHHHHHHHHhCCce----EEEEec-C----HHHHHHHHHHHHHCCCC----EEEC
Confidence 555666666777889999987665444555666557652 222111 0 00112222333444653 5599
Q ss_pred cCHhhHHHHHHcCCeEEEEeCC
Q 020871 263 DSVIGLQAATRAGMACVITYTS 284 (320)
Q Consensus 263 D~~~Dv~~a~~aG~~~v~v~~~ 284 (320)
|+.. ...|++.|++++++.++
T Consensus 149 ~~~~-~~~A~~~Gl~~vli~S~ 169 (186)
T d2pjua1 149 AGLI-TDLAEEAGMTGIFIYSA 169 (186)
T ss_dssp SHHH-HHHHHHTTSEEEESSCH
T ss_pred ChHH-HHHHHHcCCCEEEEeCH
Confidence 9976 57889999999998765
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=86.55 E-value=0.45 Score=36.91 Aligned_cols=41 Identities=10% Similarity=0.166 Sum_probs=31.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHH---HHHHHhhCCc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGME 220 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~---~~l~~~~~l~ 220 (320)
.++|++.++++.|+++|++++++||+...... ..++.+ |++
T Consensus 19 ~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~-G~~ 62 (250)
T d2c4na1 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATA-GVD 62 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHT-TCC
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhc-ccc
Confidence 57789999999999999999999987743333 334444 654
|
| >d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: ThiG-like family: ThiG-like domain: Thiazole biosynthesis protein ThiG species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.68 E-value=2.7 Score=32.12 Aligned_cols=97 Identities=14% Similarity=0.121 Sum_probs=68.3
Q ss_pred CCCChhHHHHHHH---HHHCCCcEEEEeCCchhhHHHHHHHhhCCccccCcceEEe-CCCC--CCCCCCHHHHHHHHHHc
Q 020871 178 VEPRPGVLRLMDE---AKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA-GDDV--KQKKPDPSIYVTAAKRL 251 (320)
Q Consensus 178 ~~~~~g~~~~l~~---L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~~~~fd~v~~-~~~~--~~~KP~~~~~~~~~~~l 251 (320)
..++|+..++++. |-+.|+.+..+++.+.... +.++.. |..- +.. +..+ +.+--.+..+..+.+..
T Consensus 107 ~~L~Pd~~etl~Aa~~Lv~egF~Vlpy~~~D~v~a-k~le~~-Gc~~------vMplgsPIGsg~Gi~n~~~l~~i~~~~ 178 (243)
T d1wv2a_ 107 KTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIA-RQLAEI-GCIA------VMPLAGLIGSGLGICNPYNLRIILEEA 178 (243)
T ss_dssp TTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHH-HHHHHS-CCSE------EEECSSSTTCCCCCSCHHHHHHHHHHC
T ss_pred cccCCcHHHHHHHHHHhhcCceEEEeccCCCHHHH-hHHHHc-Ccee------eeecccccccccccccHHHHHhccccC
Confidence 4577877777764 6668999999998877644 455554 5432 222 2222 34556777888888776
Q ss_pred CCCCCCEEEEecCH---hhHHHHHHcCCeEEEEeCCCC
Q 020871 252 GISEKDCLVVEDSV---IGLQAATRAGMACVITYTSST 286 (320)
Q Consensus 252 ~~~~~~~v~VGD~~---~Dv~~a~~aG~~~v~v~~~~~ 286 (320)
.+ .++||-+. +|...|-+.|+..|++|++..
T Consensus 179 ~v----pvivdAGIg~psdaa~AMElG~dgVLvnsaIa 212 (243)
T d1wv2a_ 179 KV----PVLVDAGVGTASDAAIAMELGCEAVLMNTAIA 212 (243)
T ss_dssp SS----CBEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred Cc----ceEeecccCCHHHHHHHHHccCCEEEechHhh
Confidence 66 37788776 699999999999999988654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=84.58 E-value=0.44 Score=36.99 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=28.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHH
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~ 214 (320)
...|++.++|+.|++.|++++++||+.........+
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~ 53 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQ 53 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence 466999999999999999999999977554444433
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=83.76 E-value=0.71 Score=35.79 Aligned_cols=50 Identities=10% Similarity=0.105 Sum_probs=34.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhh---HHHHHHHhhCCccccCcceEEe
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLA 230 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~---~~~~l~~~~~l~~~~~fd~v~~ 230 (320)
.+.|++.++++.|++.|++++++||+.... ....+...+++... .+.++.
T Consensus 18 ~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~~--~~~i~~ 70 (253)
T d1wvia_ 18 DRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKTP--LETIYT 70 (253)
T ss_dssp EECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHHHHSCCCC--GGGEEE
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHhhcCcccc--cccccc
Confidence 467999999999999999999999975443 33333333355433 344544
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=82.47 E-value=0.91 Score=35.52 Aligned_cols=42 Identities=19% Similarity=0.259 Sum_probs=36.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEeCCchhhHHHHHHHhhCCcc
Q 020871 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (320)
Q Consensus 179 ~~~~g~~~~l~~L~~~g~~i~i~Tn~~~~~~~~~l~~~~~l~~ 221 (320)
.+.+.+.+.|++|+++|++++++|+.+...+...++.+ ++..
T Consensus 18 ~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l-~~~~ 59 (285)
T d1nrwa_ 18 QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPL-GIKT 59 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGG-TCCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHh-CCCc
Confidence 46788999999999999999999999988888888776 6653
|