Citrus Sinensis ID: 020883

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
MVAKNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIENGEVRLKCGVVN
cccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHcccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHcccccccccccccccHHHHccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccc
ccHHHHHHHHHHHHHHHHcccccccEccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHcccccccccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccccccHHcccccccc
MVAKNLVCAIILLLLVSLGQAEAALNahyydqtcpQAEKIILDAVRnasmhdpkvPARILRMFFhdcfirgcdasvlldstpqnkaekdgppnisvrsFYVIDDAKAELekacphtvscADIIAIASRDVvtmsggpywnvlkgrkdgrvskasetrslpaptfnVTQLIQSFAQRGLGVQDLValsgghtlgfshcsSFEARLRNFsslldidpsmdLDFAEKLrskcpkpnkdrnagqfldstssafdnnyykqltvgkgvfgsdqslfgdfrTKWIVESFAIDQGLFFKEFVNSMVKLGnvgiiengEVRLKCGVVN
MVAKNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDStpqnkaekdgppnisvRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKasetrslpaptfNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRskcpkpnkdrnagqfldstssafDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGnvgiiengevrlkcgvvn
MVAKNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIENGEVRLKCGVVN
***KNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLL***************ISVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKG*****************PTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARLRNFSSLLDID*********************************AFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIENGEVRLKCGV**
****NLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCP***K*RNAGQFLDSTSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIENGEVRLKCGVVN
MVAKNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTP********PPNISVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIENGEVRLKCGVVN
**AKNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIENGEVRLKCG***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVAKNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIENGEVRLKCGVVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query320 2.2.26 [Sep-21-2011]
Q9LT91322 Peroxidase 66 OS=Arabidop yes no 0.993 0.987 0.708 1e-136
Q43872317 Peroxidase 64 OS=Arabidop no no 0.978 0.987 0.550 7e-98
Q9SZB9325 Peroxidase 47 OS=Arabidop no no 0.971 0.956 0.467 2e-77
Q43735321 Peroxidase 27 OS=Arabidop no no 0.984 0.981 0.426 9e-70
Q9LSY7329 Peroxidase 30 OS=Arabidop no no 0.95 0.924 0.435 2e-69
O23474348 Peroxidase 40 OS=Arabidop no no 0.925 0.850 0.454 2e-69
O23044326 Peroxidase 3 OS=Arabidops no no 0.975 0.957 0.444 5e-69
P37834326 Peroxidase 1 OS=Oryza sat no no 0.937 0.920 0.439 7e-69
Q9SUT2326 Peroxidase 39 OS=Arabidop no no 0.968 0.950 0.445 3e-68
Q9LXG3329 Peroxidase 56 OS=Arabidop no no 0.978 0.951 0.421 3e-67
>sp|Q9LT91|PER66_ARATH Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1 Back     alignment and function desciption
 Score =  486 bits (1251), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 226/319 (70%), Positives = 270/319 (84%), Gaps = 1/319 (0%)

Query: 3   AKNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRM 62
           +K L+ A+I  +L  +  +EAAL+AHYYDQ+CP AEKIIL+ VRNA+++DPKVPAR+LRM
Sbjct: 4   SKGLIFAMIFAVLAIVKPSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRM 63

Query: 63  FFHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADI 122
           FFHDCFIRGCDAS+LLDST  N+AEKDGPPNISVRSFYVI+DAK +LEKACP TVSCAD+
Sbjct: 64  FFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVRSFYVIEDAKRKLEKACPRTVSCADV 123

Query: 123 IAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQD 182
           IAIA+RDVVT+SGGPYW+VLKGRKDG +S+A+ETR+LP PTFNV+QLIQSFA RGL V+D
Sbjct: 124 IAIAARDVVTLSGGPYWSVLKGRKDGTISRANETRNLPPPTFNVSQLIQSFAARGLSVKD 183

Query: 183 LVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKP-NKDRNAGQF 241
           +V LSGGHT+GFSHCSSFE+RL+NFS   DIDPSM+  FA+ L+ KCP+  N+ +NAG  
Sbjct: 184 MVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTV 243

Query: 242 LDSTSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKL 301
           LDSTSS FDN YYKQ+  GKGVFGSDQ+L GD RTKWIVE+FA DQ  FF+EF  SMVKL
Sbjct: 244 LDSTSSVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKL 303

Query: 302 GNVGIIENGEVRLKCGVVN 320
           GN G+ E G+VR+    VN
Sbjct: 304 GNFGVKETGQVRVNTRFVN 322
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q43872|PER64_ARATH Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1 Back     alignment and function description
>sp|Q9SZB9|PER47_ARATH Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2 Back     alignment and function description
>sp|Q43735|PER27_ARATH Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1 Back     alignment and function description
>sp|Q9LSY7|PER30_ARATH Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1 Back     alignment and function description
>sp|O23474|PER40_ARATH Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2 Back     alignment and function description
>sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1 Back     alignment and function description
>sp|P37834|PER1_ORYSJ Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2 Back     alignment and function description
>sp|Q9SUT2|PER39_ARATH Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXG3|PER56_ARATH Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
255539599323 Peroxidase 66 precursor, putative [Ricin 0.990 0.981 0.776 1e-147
225468302323 PREDICTED: peroxidase 66 [Vitis vinifera 0.937 0.928 0.783 1e-142
225468608323 PREDICTED: peroxidase 66 [Vitis vinifera 0.937 0.928 0.766 1e-140
147866772301 hypothetical protein VITISV_042486 [Viti 0.928 0.986 0.774 1e-140
312282003322 unnamed protein product [Thellungiella h 0.993 0.987 0.708 1e-136
356529308325 PREDICTED: peroxidase 66-like [Glycine m 0.971 0.956 0.742 1e-135
357444127322 Peroxidase [Medicago truncatula] gi|3554 0.971 0.965 0.739 1e-135
297795991322 peroxidase [Arabidopsis lyrata subsp. ly 0.993 0.987 0.708 1e-135
388516101327 unknown [Lotus japonicus] 0.996 0.975 0.728 1e-135
79535288322 peroxidase 66 [Arabidopsis thaliana] gi| 0.993 0.987 0.708 1e-135
>gi|255539599|ref|XP_002510864.1| Peroxidase 66 precursor, putative [Ricinus communis] gi|223549979|gb|EEF51466.1| Peroxidase 66 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 246/317 (77%), Positives = 280/317 (88%)

Query: 4   KNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMF 63
           K+ + A I LL V +   +A L+AHYYDQTCPQAE I+L  V+NASMHDPKVPA +LRMF
Sbjct: 7   KSSLLATIFLLSVLISPLKATLDAHYYDQTCPQAENIVLQTVQNASMHDPKVPAHLLRMF 66

Query: 64  FHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADII 123
           FHDCFIRGCDAS+LLDSTP N+AEKDGPPNISVR FYVIDDAKA+LE  CPHT+SCADII
Sbjct: 67  FHDCFIRGCDASILLDSTPGNQAEKDGPPNISVRPFYVIDDAKAKLEMVCPHTISCADII 126

Query: 124 AIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDL 183
           AIA+RDVV MSGGP+WNVLKGRKDGRVS+A++T +LPAPTFNVTQLIQSFA+R LGV+D+
Sbjct: 127 AIAARDVVAMSGGPHWNVLKGRKDGRVSRANDTINLPAPTFNVTQLIQSFAKRSLGVKDM 186

Query: 184 VALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLD 243
           VALSGGHTLGFSHCSSFEARLRNFSS+ D+DPSM  +FAEKLR KCPK NKDRNAG+FLD
Sbjct: 187 VALSGGHTLGFSHCSSFEARLRNFSSVHDVDPSMKSEFAEKLRKKCPKQNKDRNAGEFLD 246

Query: 244 STSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGN 303
            TSS FDN+YYKQL  GKGVFGSDQ+LF D+RT+WIVE+F+ DQ LFF+EF  SMVKLGN
Sbjct: 247 LTSSTFDNDYYKQLKEGKGVFGSDQALFSDYRTRWIVETFSRDQSLFFREFAASMVKLGN 306

Query: 304 VGIIENGEVRLKCGVVN 320
           VG+IENGEVR KC VV+
Sbjct: 307 VGVIENGEVRHKCQVVS 323

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225468302|ref|XP_002268509.1| PREDICTED: peroxidase 66 [Vitis vinifera] gi|147794279|emb|CAN64852.1| hypothetical protein VITISV_025395 [Vitis vinifera] gi|297741139|emb|CBI31870.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225468608|ref|XP_002264451.1| PREDICTED: peroxidase 66 [Vitis vinifera] gi|296084070|emb|CBI24458.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147866772|emb|CAN83265.1| hypothetical protein VITISV_042486 [Vitis vinifera] Back     alignment and taxonomy information
>gi|312282003|dbj|BAJ33867.1| unnamed protein product [Thellungiella halophila] gi|312282049|dbj|BAJ33890.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|356529308|ref|XP_003533237.1| PREDICTED: peroxidase 66-like [Glycine max] Back     alignment and taxonomy information
>gi|357444127|ref|XP_003592341.1| Peroxidase [Medicago truncatula] gi|355481389|gb|AES62592.1| Peroxidase [Medicago truncatula] gi|388516375|gb|AFK46249.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|297795991|ref|XP_002865880.1| peroxidase [Arabidopsis lyrata subsp. lyrata] gi|297311715|gb|EFH42139.1| peroxidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|388516101|gb|AFK46112.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|79535288|ref|NP_200002.3| peroxidase 66 [Arabidopsis thaliana] gi|26397860|sp|Q9LT91.1|PER66_ARATH RecName: Full=Peroxidase 66; Short=Atperox P66; AltName: Full=ATP27a; Flags: Precursor gi|8809683|dbj|BAA97224.1| peroxidase [Arabidopsis thaliana] gi|18175873|gb|AAL59943.1| putative peroxidase [Arabidopsis thaliana] gi|21689881|gb|AAM67501.1| putative peroxidase [Arabidopsis thaliana] gi|332008759|gb|AED96142.1| peroxidase 66 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query320
TAIR|locus:2166508322 AT5G51890 [Arabidopsis thalian 0.993 0.987 0.708 9.2e-123
TAIR|locus:2165820317 PER64 "peroxidase 64" [Arabido 0.975 0.984 0.552 1.7e-89
TAIR|locus:2119251325 AT4G33420 [Arabidopsis thalian 0.971 0.956 0.464 4.8e-71
TAIR|locus:2102087321 AT3G01190 [Arabidopsis thalian 0.981 0.978 0.431 2.2e-66
TAIR|locus:2093099329 AT3G21770 [Arabidopsis thalian 0.990 0.963 0.422 2.8e-66
TAIR|locus:2207210326 RCI3 "RARE COLD INDUCIBLE GENE 0.975 0.957 0.438 4.1e-65
TAIR|locus:2817952325 AT1G05240 [Arabidopsis thalian 0.993 0.978 0.415 1.4e-64
TAIR|locus:2207215325 AT1G05250 [Arabidopsis thalian 0.993 0.978 0.415 1.4e-64
TAIR|locus:2128308326 AT4G11290 [Arabidopsis thalian 0.968 0.950 0.445 1.4e-64
TAIR|locus:2150946329 AT5G15180 [Arabidopsis thalian 0.978 0.951 0.421 2.3e-64
TAIR|locus:2166508 AT5G51890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1207 (429.9 bits), Expect = 9.2e-123, P = 9.2e-123
 Identities = 226/319 (70%), Positives = 270/319 (84%)

Query:     3 AKNLVCAIILLLLVSLGQAEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRM 62
             +K L+ A+I  +L  +  +EAAL+AHYYDQ+CP AEKIIL+ VRNA+++DPKVPAR+LRM
Sbjct:     4 SKGLIFAMIFAVLAIVKPSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRM 63

Query:    63 FFHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADI 122
             FFHDCFIRGCDAS+LLDST  N+AEKDGPPNISVRSFYVI+DAK +LEKACP TVSCAD+
Sbjct:    64 FFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVRSFYVIEDAKRKLEKACPRTVSCADV 123

Query:   123 IAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQD 182
             IAIA+RDVVT+SGGPYW+VLKGRKDG +S+A+ETR+LP PTFNV+QLIQSFA RGL V+D
Sbjct:   124 IAIAARDVVTLSGGPYWSVLKGRKDGTISRANETRNLPPPTFNVSQLIQSFAARGLSVKD 183

Query:   183 LVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKP-NKDRNAGQF 241
             +V LSGGHT+GFSHCSSFE+RL+NFS   DIDPSM+  FA+ L+ KCP+  N+ +NAG  
Sbjct:   184 MVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTV 243

Query:   242 LDSTSSAFDNNYYKQLTVGKGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKL 301
             LDSTSS FDN YYKQ+  GKGVFGSDQ+L GD RTKWIVE+FA DQ  FF+EF  SMVKL
Sbjct:   244 LDSTSSVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFAQDQKAFFREFAASMVKL 303

Query:   302 GNVGIIENGEVRLKCGVVN 320
             GN G+ E G+VR+    VN
Sbjct:   304 GNFGVKETGQVRVNTRFVN 322
GO:0004601 "peroxidase activity" evidence=IEA;ISS;TAS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2165820 PER64 "peroxidase 64" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119251 AT4G33420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102087 AT3G01190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093099 AT3G21770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2817952 AT1G05240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207215 AT1G05250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128308 AT4G11290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150946 AT5G15180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LT91PER66_ARATH1, ., 1, 1, ., 1, ., 70.70840.99370.9875yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-167
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-86
pfam00141180 pfam00141, peroxidase, Peroxidase 5e-65
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 3e-24
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 8e-15
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 2e-11
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 2e-10
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 3e-10
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-09
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 7e-06
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  465 bits (1200), Expect = e-167
 Identities = 158/298 (53%), Positives = 207/298 (69%), Gaps = 4/298 (1%)

Query: 25  LNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQN 84
           L+  +Y ++CP AE I+   VR A   DP++ A +LR+ FHDCF+RGCDASVLLDST  N
Sbjct: 2   LSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANN 61

Query: 85  KAEKDGPPNISVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKG 144
            +EKD PPN+S+R F VIDD KA LE ACP  VSCADI+A+A+RD V ++GGP + V  G
Sbjct: 62  TSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLG 121

Query: 145 RKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEARL 204
           R+DGRVS A++  +LP+P F+V+QLI  FA +GL V DLVALSG HT+G +HCSSF  RL
Sbjct: 122 RRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSDRL 181

Query: 205 RNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLD-STSSAFDNNYYKQLTVGKGV 263
            NFS   D DP++D  +A +LR KCP    D      LD  T + FDN+YYK L  G+G+
Sbjct: 182 YNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTL-VPLDPGTPNTFDNSYYKNLLAGRGL 240

Query: 264 FGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIE--NGEVRLKCGVV 319
             SDQ+L  D RT+ IV  +A +Q  FF++F  +MVK+GN+G++    GE+R  C VV
Sbjct: 241 LTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 320
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.97
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.3
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.9e-109  Score=784.26  Aligned_cols=297  Identities=42%  Similarity=0.739  Sum_probs=281.9

Q ss_pred             cccccccchhhcCCccHHHHHHHHHHHHHhcCCCCccchheeeeecccCCCCCceeecCCCCCCCcCcCCCCCCCcchHH
Q 020883           21 AEAALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQNKAEKDGPPNISVRSFY  100 (320)
Q Consensus        21 ~~~~l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~L~g~~  100 (320)
                      +.++|+++||++|||++|+||+++|++++.++++++|++|||+||||||+||||||||+++   ..||++++|.+|+||+
T Consensus        21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~   97 (324)
T PLN03030         21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYD   97 (324)
T ss_pred             hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHH
Confidence            4567999999999999999999999999999999999999999999999999999999965   3799999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCCHHHHHHHhhhhHHhhcCCCcccccCCCcCCCCCCcccCCCCCCCCCCHHHHHHHHHHcCCCc
Q 020883          101 VIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASETRSLPAPTFNVTQLIQSFAQRGLGV  180 (320)
Q Consensus       101 ~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Glt~  180 (320)
                      +||.||++||++||++|||||||||||||||+++|||.|+|++||||+++|...++.+||+|+.++++|++.|+++||+.
T Consensus        98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~  177 (324)
T PLN03030         98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNT  177 (324)
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999877666789999999999999999999999


Q ss_pred             ccchhhccCccccccccCccccccccCCCCC-CCCCCCCHHHHHHHHhcCCCCCCCCCCCCcCCCCCCccChHHHHHhhc
Q 020883          181 QDLVALSGGHTLGFSHCSSFEARLRNFSSLL-DIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTV  259 (320)
Q Consensus       181 ~dlVaLsGaHTiG~~hc~~f~~rl~~f~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~tp~~FDN~Yy~~l~~  259 (320)
                      +|||+||||||||++||.+|.+|||||.+++ .+||+|||.|+..|++.||..++..+.+++|+.||.+|||+||+||+.
T Consensus       178 ~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll~  257 (324)
T PLN03030        178 QDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLKN  257 (324)
T ss_pred             HHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHHh
Confidence            9999999999999999999999999999875 589999999999999999953222346789999999999999999999


Q ss_pred             CCcccccccccccCcchHHHHHHHhhCH----HHHHHHHHHHHHHHhcCCCCC--CCcccccCcCCC
Q 020883          260 GKGVFGSDQSLFGDFRTKWIVESFAIDQ----GLFFKEFVNSMVKLGNVGIIE--NGEVRLKCGVVN  320 (320)
Q Consensus       260 ~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~t--~GeiR~~C~~~n  320 (320)
                      ++|+|+|||+|+.|++|+++|++||.|+    +.|+++|++||+|||+|+|+|  +|||||+|+++|
T Consensus       258 ~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        258 GRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             cCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            9999999999999999999999999875    599999999999999999999  999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 4e-66
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 7e-66
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 2e-64
1sch_A294 Peanut Peroxidase Length = 294 8e-62
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 1e-61
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 3e-61
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-60
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 9e-60
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 9e-60
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 9e-60
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 1e-59
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 1e-59
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 3e-59
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 3e-59
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 3e-59
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 5e-59
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 9e-59
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 6e-58
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 5e-56
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 1e-10
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 2e-10
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 4e-09
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 6e-09
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 7e-09
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 7e-09
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 8e-09
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 8e-09
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 8e-09
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 8e-09
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 9e-09
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 9e-09
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 1e-08
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 6e-05
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 3e-04
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 3e-04
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 4e-04
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 5e-04
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 8e-04
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  248 bits (632), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 132/302 (43%), Positives = 186/302 (61%), Gaps = 6/302 (1%)
Query: 25  LNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQN 84
           L   +Y +TCP    I+   + +AS  DP++ A ++R+ FHDCF++GCD SVLL++T   
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61
Query: 85  KAEKDGPPNI-SVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLK 143
           ++E+D  PNI S+R   V++D K  +E +CP TVSCADI+AIA+     + GGP W V  
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121
Query: 144 GRKDG-RVSKASETRSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEA 202
           GR+D    ++    ++LPAP FN+TQL  SFA +GL   DLV LSGGHT G + CS+F  
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN 181
Query: 203 RLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTVGKG 262
           RL NFS+  + DP+++  + E LR++CP+     N      ST   FDN YY  L    G
Sbjct: 182 RLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNG 241
Query: 263 VFGSDQSLFGD--FRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGII--ENGEVRLKCGV 318
           +  SDQ LF      T  IV SF+ +Q  FF  F  SM+K+GN+G++  + GE+RL+C  
Sbjct: 242 LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNF 301
Query: 319 VN 320
           VN
Sbjct: 302 VN 303
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query320
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-167
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-166
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-166
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-164
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-164
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-164
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-160
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 6e-78
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 4e-72
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 9e-72
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 7e-71
2e39_A344 Peroxidase; heme protein, coordination geometry of 7e-66
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 1e-64
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-64
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-19
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 7e-15
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  465 bits (1198), Expect = e-167
 Identities = 131/302 (43%), Positives = 182/302 (60%), Gaps = 6/302 (1%)

Query: 25  LNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQN 84
           L   +Y+ +CP AE ++  AV  A  ++  +   ++RM FHDCF+RGCDASVLLDST  N
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61

Query: 85  KAEKDGPPNI-SVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLK 143
            AEKD  PN  S+R F VI  AK+ +E ACP TVSCADI+A A+RD   ++G   + V  
Sbjct: 62  TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121

Query: 144 GRKDGRVSKASET-RSLPAPTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEA 202
           GR+DG VS ASE    +P+P FN TQLI SFA + L   ++V LSG H++G +HCSSF  
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTN 181

Query: 203 RLRNFSSLLDIDPSMDLDFAEKLRSKCPKP-NKDRNAGQFLD-STSSAFDNNYYKQLTVG 260
           RL NF+S   IDP++   +A  LR+ CP    +       LD  T S  DN YY  + + 
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241

Query: 261 KGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGII--ENGEVRLKCGV 318
            G+  SDQ+L  +      V++ A++   +  +F  +MVK+G + ++    GE+R  C V
Sbjct: 242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSV 301

Query: 319 VN 320
           VN
Sbjct: 302 VN 303
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.5e-110  Score=793.65  Aligned_cols=296  Identities=44%  Similarity=0.745  Sum_probs=287.4

Q ss_pred             cccchhhcCCccHHHHHHHHHHHHHhcCCCCccchheeeeecccCCCCCceeecCCCCCCCcCcCCCCCC-CcchHHHHH
Q 020883           25 LNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQNKAEKDGPPNI-SVRSFYVID  103 (320)
Q Consensus        25 l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~-~L~g~~~Id  103 (320)
                      |+++||++|||++|+|||++|++++.++++++|++||||||||||+||||||||++++++.+||++++|. +|+||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999988888999999998 899999999


Q ss_pred             HHHHHHHhhCCCCCCHHHHHHHhhhhHHhhcCCCcccccCCCcCCCCCCcccC-CCCCCCCCCHHHHHHHHHHcCCCccc
Q 020883          104 DAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASET-RSLPAPTFNVTQLIQSFAQRGLGVQD  182 (320)
Q Consensus       104 ~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Glt~~d  182 (320)
                      .||++||+.||++||||||||||||+||+++|||.|+|++||||++++...++ .+||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999988777 78999999999999999999999999


Q ss_pred             chhhccCccccccccCccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCCCcCCCCCCccChHHHHHhhcC
Q 020883          183 LVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNK--DRNAGQFLDSTSSAFDNNYYKQLTVG  260 (320)
Q Consensus       183 lVaLsGaHTiG~~hc~~f~~rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~d~~tp~~FDN~Yy~~l~~~  260 (320)
                      |||||||||||++||.+|.+|||||+|++.+||+||+.|++.|+..||.+.+  .++.+++|+.||.+|||+||++|+.+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~  241 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT  241 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHhC
Confidence            9999999999999999999999999998889999999999999999997654  45578999999999999999999999


Q ss_pred             CcccccccccccCcchHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCC--CCcccccCcCCC
Q 020883          261 KGVFGSDQSLFGDFRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIE--NGEVRLKCGVVN  320 (320)
Q Consensus       261 ~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~t--~GeiR~~C~~~n  320 (320)
                      +|||+|||+|+.|++|+++|++||.|++.|+++|++||+||++|+|+|  +||||++|++||
T Consensus       242 ~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             CCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            999999999999999999999999999999999999999999999999  999999999998
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 320
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-116
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-114
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-113
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-108
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-105
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-105
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 3e-63
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 5e-63
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 4e-59
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 7e-42
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 7e-41
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 3e-39
d1itka2308 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Arc 0.001
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  335 bits (861), Expect = e-116
 Identities = 130/302 (43%), Positives = 182/302 (60%), Gaps = 6/302 (1%)

Query: 25  LNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQN 84
           L   +Y +TCP    I+   + +AS  DP++ A ++R+ FHDCF++GCD SVLL++T   
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 85  KAEKDGPPNI-SVRSFYVIDDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLK 143
           ++E+D  PNI S+R   V++D K  +E +CP TVSCADI+AIA+     + GGP W V  
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 144 GRKDGRVSKASETRSLP-APTFNVTQLIQSFAQRGLGVQDLVALSGGHTLGFSHCSSFEA 202
           GR+D   +  +       AP FN+TQL  SFA +GL   DLV LSGGHT G + CS+F  
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN 181

Query: 203 RLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTVGKG 262
           RL NFS+  + DP+++  + E LR++CP+     N      ST   FDN YY  L    G
Sbjct: 182 RLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNG 241

Query: 263 VFGSDQSLFGD--FRTKWIVESFAIDQGLFFKEFVNSMVKLGNVGII--ENGEVRLKCGV 318
           +  SDQ LF      T  IV SF+ +Q  FF  F  SM+K+GN+G++  + GE+RL+C  
Sbjct: 242 LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNF 301

Query: 319 VN 320
           VN
Sbjct: 302 VN 303
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 308 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query320
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.97
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.1e-104  Score=753.71  Aligned_cols=297  Identities=44%  Similarity=0.792  Sum_probs=287.3

Q ss_pred             ccccchhhcCCccHHHHHHHHHHHHHhcCCCCccchheeeeecccCCCCCceeecCCCCCCCcCcCCCCCCC-cchHHHH
Q 020883           24 ALNAHYYDQTCPQAEKIILDAVRNASMHDPKVPARILRMFFHDCFIRGCDASVLLDSTPQNKAEKDGPPNIS-VRSFYVI  102 (320)
Q Consensus        24 ~l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~-L~g~~~I  102 (320)
                      ||+.+||++|||++|+|||++|++.+.+|++++|+||||+||||||+||||||||+++.++.+|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999999888889999999985 6899999


Q ss_pred             HHHHHHHHhhCCCCCCHHHHHHHhhhhHHhhcCCCcccccCCCcCCCCCCcccC-CCCCCCCCCHHHHHHHHHHcCCCcc
Q 020883          103 DDAKAELEKACPHTVSCADIIAIASRDVVTMSGGPYWNVLKGRKDGRVSKASET-RSLPAPTFNVTQLIQSFAQRGLGVQ  181 (320)
Q Consensus       103 d~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GRrD~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Glt~~  181 (320)
                      |.||++||+.||++||||||||||||+||+++|||.|+|++||+|+++|+..++ .+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999999999999999999999999999999987777 7899999999999999999999999


Q ss_pred             cchhhccCccccccccCccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCCcCCCCCCccChHHHHHhhcCC
Q 020883          182 DLVALSGGHTLGFSHCSSFEARLRNFSSLLDIDPSMDLDFAEKLRSKCPKPNKDRNAGQFLDSTSSAFDNNYYKQLTVGK  261 (320)
Q Consensus       182 dlVaLsGaHTiG~~hc~~f~~rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~d~~tp~~FDN~Yy~~l~~~~  261 (320)
                      ||||||||||||++||.+|..|+|+|.+++.+||.+++.|+..|+..||.+....+.+.+|+.||.+|||+||++++.++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~~  240 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN  240 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTTC
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhcC
Confidence            99999999999999999999999999999899999999999999999997665556788999999999999999999999


Q ss_pred             cccccccccccCc--chHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCC--CCcccccCcCCC
Q 020883          262 GVFGSDQSLFGDF--RTKWIVESFAIDQGLFFKEFVNSMVKLGNVGIIE--NGEVRLKCGVVN  320 (320)
Q Consensus       262 glL~SD~~L~~d~--~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~t--~GeiR~~C~~~n  320 (320)
                      |+|+|||+|+.||  +|+++|++||.|+++|+++|++||+||++|||+|  +|||||+|+++|
T Consensus       241 glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         241 GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             CSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            9999999999996  7999999999999999999999999999999999  999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure