Citrus Sinensis ID: 020916
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | 2.2.26 [Sep-21-2011] | |||||||
| Q8IUS5 | 362 | Epoxide hydrolase 4 OS=Ho | yes | no | 0.703 | 0.621 | 0.254 | 5e-11 | |
| Q6IE26 | 359 | Epoxide hydrolase 4 OS=Mu | yes | no | 0.296 | 0.264 | 0.323 | 1e-08 | |
| Q1LZ86 | 337 | Monoacylglycerol lipase A | no | no | 0.756 | 0.718 | 0.257 | 3e-08 | |
| Q9H6B9 | 360 | Epoxide hydrolase 3 OS=Ho | no | no | 0.762 | 0.677 | 0.237 | 3e-08 | |
| Q0IIS3 | 367 | Epoxide hydrolase 3 OS=Xe | yes | no | 0.734 | 0.640 | 0.241 | 4e-08 | |
| Q9BV23 | 337 | Monoacylglycerol lipase A | no | no | 0.746 | 0.709 | 0.252 | 3e-07 | |
| Q8R2Y0 | 336 | Monoacylglycerol lipase A | no | no | 0.718 | 0.684 | 0.258 | 7e-07 | |
| P0A573 | 341 | Uncharacterized protein M | yes | no | 0.306 | 0.287 | 0.313 | 7e-07 | |
| P0A572 | 341 | Uncharacterized protein R | yes | no | 0.306 | 0.287 | 0.313 | 7e-07 | |
| Q5XI64 | 337 | Monoacylglycerol lipase A | no | no | 0.746 | 0.709 | 0.249 | 9e-07 |
| >sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 121/283 (42%), Gaps = 58/283 (20%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
KP+++L+HGF E +W++Q+ +Y V DL +G TD ++ CL T
Sbjct: 93 KPLMLLLHGFP-EFWYSWRYQLREFKSEYRVVALDLRGYGE--TDAPIHRQNYKLDCLIT 149
Query: 123 G----LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
L LG KCVL+G +GGM+++ +A YP +V ++V IN + N
Sbjct: 150 DIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIV----------INFPHPNV 199
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKL-WFPSCLY--KDF--LEVMFANRKE----- 228
+E +L + + LK+ S + ++ WFP ++ DF L+ +F +
Sbjct: 200 F-----TEYILRHPAQLLKS--SYYYFFQIPWFPEFMFSINDFKVLKHLFTSHSTGIGRK 252
Query: 229 ----RAELLEGLLISNKDP------------TVPNFPQRVH-------LLWGEDDQIFNV 265
E LE + P P + H LLWGE+D V
Sbjct: 253 GCQLTTEDLEAYIYVFSQPGALSGPINHYRNIFSCLPLKHHMVTTPTLLLWGENDAFMEV 312
Query: 266 ELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
E+A K + ++ + +A H + ++P N+ + FL
Sbjct: 313 EMAEVTKIYV-KNYFRLTILSEASHWLQQDQPDIVNKLIWTFL 354
|
Homo sapiens (taxid: 9606) EC: 3EC: .EC: 3EC: .EC: -EC: .EC: - |
| >sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
KP+++L+HGF E +W+ Q+ +Y V DL +G S D +++ CL
Sbjct: 91 KPLMLLLHGFP-EFWYSWRHQLREFKSEYRVVALDLRGYGES--DAPAHQESYKLDCLIA 147
Query: 123 G----LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
L LG KCVL+G +GGM+++ +A YP ++ ++V
Sbjct: 148 DIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIV 189
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
| >sp|Q1LZ86|ABHD6_BOVIN Monoacylglycerol lipase ABHD6 OS=Bos taurus GN=ABHD6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 30/272 (11%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG---------SITDEADRSP 113
KP ++++HGF+A + W V L K + D+ G SI + R
Sbjct: 71 KPSILMLHGFSAHKDM-WLSMVKFLPKNLHLVCVDMPGHEGTTRSSLDDLSIDGQVKRIH 129
Query: 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLV--QAMVVSGSILAMTDSI 171
F +CL KL LVG S GG V+ A YP+ V ++V + TD+
Sbjct: 130 QF-VECL-----KLNKKPFHLVGTSMGGHVAGVYAAHYPSDVCSLSLVCPAGLQYSTDNK 183
Query: 172 NETNLNRLGVSSSSEL--LLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFA-NRKE 228
L L S++ E L+P + K + +L + +Y + P + + ++V N
Sbjct: 184 FVQRLKELQESAAVEKIPLIPTTPKEMSEMLQLCSYVRFKVPQQILQGLVDVRIPHNTFY 243
Query: 229 RAELLEGLLISNKD-----PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ 283
R LE ++S K + ++WG+ DQ+ +V A + + + V
Sbjct: 244 RKLFLE--IVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSGADMLAKSIANSQVEL- 300
Query: 284 GIKKAGHLVHLERPCAYNRCLKQFLASLHADE 315
++ GH V +ERP + L FLAS+H+ +
Sbjct: 301 -LENCGHSVVMERPRKTAKLLVDFLASVHSTD 331
|
Has 2-arachidonoylglycerol hydrolase activity (By similarity). May be a regulator of endocannabinoid signaling pathways. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q9H6B9|EPHX3_HUMAN Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 21/265 (7%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATG 123
P+++ +HGF E +W++Q+ ++ V DL +G S D + L
Sbjct: 98 PLMLFLHGFP-ENWFSWRYQLREFQSRFHVVAVDLRGYGPS--DAPRDVDCYTIDLLLVD 154
Query: 124 LAK----LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAM-VVSGSILAMTDSINETNLNR 178
+ LG KC+LV +G ++++ + YP+LV+ M VVSG+ +++ + ++++
Sbjct: 155 IKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSGAPMSVYQDYSLHHISQ 214
Query: 179 LGVSSSSELL----LPN---SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAE 231
S L LP S+ + L + T++K P CL LE N +
Sbjct: 215 FFRSHYMFLFQLPWLPEKLLSMSDFQILKTTLTHRKTGIP-CLTPSELEAFLYNFSQPGG 273
Query: 232 LLEGL-LISNKDPTVPNFPQRVH----LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIK 286
L L N P PQ + LLWGE D + L + + + +
Sbjct: 274 LTGPLNYYRNLFRNFPLEPQELTTPTLLLWGEKDTYLELGLVEAIGSRFVPGRLEAHILP 333
Query: 287 KAGHLVHLERPCAYNRCLKQFLASL 311
GH + P ++ + FL L
Sbjct: 334 GIGHWIPQSNPQEMHQYMWAFLQDL 358
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
| >sp|Q0IIS3|EPHX3_XENTR Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 114/273 (41%), Gaps = 38/273 (13%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
P+++L+HGF E +W++Q+ + Y DL FGGS D R ++ + L
Sbjct: 97 NPLMLLLHGFP-ENWYSWRYQLDEFSNGYRTVAIDLRGFGGS--DAPSRLEDYKMEILLQ 153
Query: 123 GLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
L L G +CVLVG +GG +++ A + ++V ++V + + ++ L+
Sbjct: 154 DLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLIVMNA--PHPSAFHDYVLSH 211
Query: 179 LGVSSSS------------ELLLP-NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN 225
SS E+LL + +K L+ AT+ L K+ +E
Sbjct: 212 PSQLFSSRYVFLFQLPLIPEILLSLRDFEHIKKPLTDATHGIQNVECKLSKEEVEAFVYY 271
Query: 226 RKERAEL---------LEGLL-ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL 275
++ L L G + +D VP LLWGE D + M++ +
Sbjct: 272 PSQKGALTPPLNYYRNLFGFFPVKAQDVLVPTL-----LLWGEHDAFLEAAMVPEMQQYV 326
Query: 276 GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
A + I A H + +RP N+ ++ FL
Sbjct: 327 RAPFRA-EIIPNASHWLQQDRPQEVNKIIRDFL 358
|
Xenopus tropicalis (taxid: 8364) EC: 3 EC: . EC: 3 EC: . EC: - EC: . EC: - |
| >sp|Q9BV23|ABHD6_HUMAN Monoacylglycerol lipase ABHD6 OS=Homo sapiens GN=ABHD6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 30/269 (11%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG---------SITDEADRSP 113
KP ++++HGF+A + W V L K + D+ G SI + R
Sbjct: 71 KPSILMLHGFSAHKDM-WLSVVKFLPKNLHLVCVDMPGHEGTTRSSLDDLSIDGQVKRIH 129
Query: 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAM--VVSGSILAMTDSI 171
F +CL KL LVG S GG V+ A YP+ V ++ V + TD+
Sbjct: 130 QF-VECL-----KLNKKPFHLVGTSMGGQVAGVYAAYYPSDVSSLCLVCPAGLQYSTDNQ 183
Query: 172 NETNLNRLGVSSSSEL--LLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFA-NRKE 228
L L S++ E L+P++ + + +L + +Y + P + + ++V N
Sbjct: 184 FVQRLKELQGSAAVEKIPLIPSTPEEMSEMLQLCSYVRFKVPQQILQGLVDVRIPHNNFY 243
Query: 229 RAELLEGLLISNKD-----PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ 283
R LE ++S K + ++WG+ DQ+ +V A + + + V
Sbjct: 244 RKLFLE--IVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSGADMLAKSIANCQVEL- 300
Query: 284 GIKKAGHLVHLERPCAYNRCLKQFLASLH 312
++ GH V +ERP + + FLAS+H
Sbjct: 301 -LENCGHSVVMERPRKTAKLIIDFLASVH 328
|
Has 2-arachidonoylglycerol hydrolase activity (By similarity). May be a regulator of endocannabinoid signaling pathways. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q8R2Y0|ABHD6_MOUSE Monoacylglycerol lipase ABHD6 OS=Mus musculus GN=Abhd6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 48/278 (17%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG---------SITDEADRSP 113
KP ++++HGF+A + W V L K + D+ G SI + R
Sbjct: 71 KPSILMLHGFSAHKDM-WLSVVKFLPKNLHLVCVDMPGHEGTTRSSLDDLSIVGQVKRIH 129
Query: 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLV--QAMVVSGSILAMTDSI 171
F +CL KL L+G S GG V+ A YP+ V ++V + TD+
Sbjct: 130 QF-VECL-----KLNKKPFHLIGTSMGGHVAGVYAAYYPSDVCSLSLVCPAGLQYSTDNP 183
Query: 172 NETNLNRLGVSSSSEL--LLPNSVKGLKALLSVATYKKLWFP---------------SCL 214
L L S++ + L+P++ + + +L + +Y + P S
Sbjct: 184 FVQRLKELEESAAIQKIPLIPSTPEEMSEMLQLCSYVRFKVPQQILQGLVDVRIPHNSFY 243
Query: 215 YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQ 274
K FLE++ N K R L E + K PT ++WG+ DQ+ +V A + +
Sbjct: 244 RKLFLEIV--NEKSRYSLHENM-DKIKVPT--------QIIWGKQDQVLDVSGADILAKS 292
Query: 275 LGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312
+ V + ++ GH V +ERP + + FLAS+H
Sbjct: 293 ISNSQV--EVLENCGHSVVMERPRKTAKLIVDFLASVH 328
|
Has 2-arachidonoylglycerol hydrolase activity. May be a regulator of endocannabinoid signaling pathways. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P0A573|Y2734_MYCBO Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
S P ++L+HG + TW L ++++V PDLL G S AD S A +
Sbjct: 36 SGPAILLIHGIG-DNSTTWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMR 94
Query: 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
L+ L +++ +VG S GG V+ + A +P LV +++
Sbjct: 95 DLLSVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLIL 133
|
Mycobacterium bovis (taxid: 1765) |
| >sp|P0A572|Y2715_MYCTU Uncharacterized protein Rv2715/MT2788 OS=Mycobacterium tuberculosis GN=Rv2715 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
S P ++L+HG + TW L ++++V PDLL G S AD S A +
Sbjct: 36 SGPAILLIHGIG-DNSTTWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMR 94
Query: 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
L+ L +++ +VG S GG V+ + A +P LV +++
Sbjct: 95 DLLSVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLIL 133
|
Mycobacterium tuberculosis (taxid: 1773) |
| >sp|Q5XI64|ABHD6_RAT Monoacylglycerol lipase ABHD6 OS=Rattus norvegicus GN=Abhd6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 30/269 (11%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG---------SITDEADRSP 113
KP V+++HGF+A + W V L K + D+ G SI + R
Sbjct: 71 KPSVLMLHGFSAHKDM-WLSVVKFLPKNLHLVCVDMPGHEGTTRSSLDDLSIVGQVKRIH 129
Query: 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLV--QAMVVSGSILAMTDSI 171
F +CL KL L+G S GG V+ A YP+ V ++V + TD+
Sbjct: 130 QF-VECL-----KLNKKPFHLIGTSMGGNVAGVYAAYYPSDVCSLSLVCPAGLQYSTDNR 183
Query: 172 NETNLNRLGVSSSSEL--LLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFA-NRKE 228
L L S++++ L+P++ + + +L + +Y + P + + ++V N
Sbjct: 184 FVQRLKELEDSAATQKIPLIPSTPEEMSEMLQLCSYVRFKVPQQILQGLVDVRIPHNSFY 243
Query: 229 RAELLEGLLISNKD-----PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ 283
R LE ++S K + ++WG+ DQ+ +V A + + + V +
Sbjct: 244 RKLFLE--IVSEKSRYSLHENMDKIKVPTQIIWGKQDQVLDVSGADILAKSITNSQV--E 299
Query: 284 GIKKAGHLVHLERPCAYNRCLKQFLASLH 312
++ GH V +ERP + + FLAS+H
Sbjct: 300 VLENCGHSVVMERPRKTAKLVVDFLASVH 328
|
Has 2-arachidonoylglycerol hydrolase activity (By similarity). May be a regulator of endocannabinoid signaling pathways. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | ||||||
| 224094795 | 317 | predicted protein [Populus trichocarpa] | 0.984 | 0.993 | 0.781 | 1e-144 | |
| 224134276 | 316 | predicted protein [Populus trichocarpa] | 0.965 | 0.977 | 0.781 | 1e-141 | |
| 255561126 | 317 | abhydrolase domain containing, putative | 0.981 | 0.990 | 0.752 | 1e-140 | |
| 225430746 | 314 | PREDICTED: protein PHYLLO, chloroplastic | 0.968 | 0.987 | 0.773 | 1e-140 | |
| 118485686 | 302 | unknown [Populus trichocarpa] | 0.937 | 0.993 | 0.777 | 1e-137 | |
| 357518259 | 314 | Epoxide hydrolase [Medicago truncatula] | 0.978 | 0.996 | 0.753 | 1e-135 | |
| 356503026 | 316 | PREDICTED: epoxide hydrolase 4-like [Gly | 0.959 | 0.971 | 0.727 | 1e-134 | |
| 356559398 | 316 | PREDICTED: epoxide hydrolase 3-like [Gly | 0.968 | 0.981 | 0.699 | 1e-129 | |
| 449529100 | 314 | PREDICTED: monoacylglycerol lipase ABHD6 | 0.975 | 0.993 | 0.721 | 1e-127 | |
| 449457528 | 314 | PREDICTED: monoacylglycerol lipase ABHD6 | 0.975 | 0.993 | 0.718 | 1e-126 |
| >gi|224094795|ref|XP_002310238.1| predicted protein [Populus trichocarpa] gi|222853141|gb|EEE90688.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/316 (78%), Positives = 281/316 (88%), Gaps = 1/316 (0%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKK 60
MVNLVAAQ+PLL GLMKMAGVQPH VEIEPGT MNFWVP ET++KP+KGEK + L K
Sbjct: 1 MVNLVAAQKPLLHGLMKMAGVQPHIVEIEPGTVMNFWVPNETVKKPQKGEKKNDTPTLTK 60
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P+KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITD+ DRSPTFQA+ L
Sbjct: 61 PNKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDKTDRSPTFQAETL 120
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
GL K+GV+KC+LVGFSYGGMV+FK+AELYP+LVQAMV+SGSILAMTDSI+E L+ LG
Sbjct: 121 VKGLRKIGVEKCILVGFSYGGMVAFKMAELYPDLVQAMVISGSILAMTDSISEATLSELG 180
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SSSELLLPNSV GLKALLSVAT+KKLWFP+ L+KD+LEVMF NRKERAELLEGL+I+N
Sbjct: 181 FKSSSELLLPNSVNGLKALLSVATHKKLWFPNRLHKDYLEVMFTNRKERAELLEGLVINN 240
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KDPT+P F Q++HLLWGE+DQIF +E A NMKE+LG + VTFQGI+KAGHLV LERPC Y
Sbjct: 241 KDPTIPKFVQKIHLLWGENDQIFKLEHAQNMKEKLG-ETVTFQGIQKAGHLVQLERPCVY 299
Query: 301 NRCLKQFLASLHADEQ 316
N+CLKQFL SL +E+
Sbjct: 300 NKCLKQFLTSLLENEE 315
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134276|ref|XP_002327799.1| predicted protein [Populus trichocarpa] gi|222836884|gb|EEE75277.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/311 (78%), Positives = 275/311 (88%), Gaps = 2/311 (0%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKK 60
MVNLVAAQ PLL GLMKMAGVQPH VEIEPGT MNFWVP ET++KP+KGEK + L K
Sbjct: 1 MVNLVAAQTPLLHGLMKMAGVQPHRVEIEPGTVMNFWVPNETVKKPQKGEKN-KTPTLTK 59
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P+KPV+VLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG SITD+ DRSPTFQA+ L
Sbjct: 60 PNKPVIVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGSSITDKTDRSPTFQAETL 119
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
GL K G++KC++VGFSYGGMV+FK+AELYP+LVQAMV+SGSILAMTDSI+E L+ LG
Sbjct: 120 VKGLKKFGIEKCIVVGFSYGGMVAFKMAELYPDLVQAMVISGSILAMTDSISEATLSELG 179
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SSSELLLP+SVKGLK LLSVATYKKLWFP+ L+KD+LEVMF NRKERAELLEGL+I+N
Sbjct: 180 FKSSSELLLPDSVKGLKTLLSVATYKKLWFPNRLHKDYLEVMFTNRKERAELLEGLVINN 239
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KDPT+P F Q++HLLWGE+DQIFN+ LA NMK QLG + TFQGI+KAGHLVHLERPC Y
Sbjct: 240 KDPTIPRFVQKIHLLWGENDQIFNLGLAQNMKGQLG-ETATFQGIQKAGHLVHLERPCVY 298
Query: 301 NRCLKQFLASL 311
NRCLK+FL SL
Sbjct: 299 NRCLKRFLTSL 309
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561126|ref|XP_002521575.1| abhydrolase domain containing, putative [Ricinus communis] gi|223539253|gb|EEF40846.1| abhydrolase domain containing, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/315 (75%), Positives = 274/315 (86%), Gaps = 1/315 (0%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKK 60
MVNLVAAQ+PLL GLMKMAGV PH+V+IE GT MNFWVP ETI KP+K E+ + + L
Sbjct: 1 MVNLVAAQKPLLHGLMKMAGVIPHSVQIELGTVMNFWVPVETIRKPRKDEETPKTQTLTT 60
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P+KPVVVL+HGFAAEGIVTWQFQVGALTKKYSVY+PDLLFFGGS+TD+ DRSP FQA+ +
Sbjct: 61 PAKPVVVLIHGFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGGSLTDKTDRSPVFQAETV 120
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
GL KLGV KC +VGFSYGGMV+FK+AELYP++VQAMV+SGSILAMTDSI++ L+RLG
Sbjct: 121 VKGLKKLGVQKCTVVGFSYGGMVAFKMAELYPDMVQAMVISGSILAMTDSISDATLSRLG 180
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SSSELLLP SVKGLKALLSVA YKKLWFP+ L+KDFLEVMF NR ERAELLEGL+ISN
Sbjct: 181 FKSSSELLLPTSVKGLKALLSVAAYKKLWFPNRLHKDFLEVMFTNRNERAELLEGLVISN 240
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KDPT+ FPQ++HLLWGE+D+IF +E A NMKEQLG ++ TF+GIKKAGHLVHLERPC Y
Sbjct: 241 KDPTIHKFPQKIHLLWGENDEIFKLEFAQNMKEQLG-ENATFEGIKKAGHLVHLERPCVY 299
Query: 301 NRCLKQFLASLHADE 315
NRCLK+FLASL +
Sbjct: 300 NRCLKKFLASLQGPQ 314
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430746|ref|XP_002266831.1| PREDICTED: protein PHYLLO, chloroplastic [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/314 (77%), Positives = 273/314 (86%), Gaps = 4/314 (1%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKK 60
MVNLVAAQ+PLL GLMKMAGV+PH VEIEPGT MNFWVP ET+EKPKK I +L+K
Sbjct: 1 MVNLVAAQKPLLHGLMKMAGVRPHMVEIEPGTVMNFWVPCETVEKPKKKGDI---SSLRK 57
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P+KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVY+PDLLFFG S TD++DRSPTFQA+CL
Sbjct: 58 PTKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGDSTTDKSDRSPTFQAECL 117
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
GL KLGV+KC +VGFSYGGMV+FK+AEL+ +LVQA+VVSGSILAMTDSI+E L RLG
Sbjct: 118 EKGLRKLGVEKCTIVGFSYGGMVAFKMAELHQDLVQAVVVSGSILAMTDSISEATLQRLG 177
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
+SSSELLLP SVKGLKALLSVA +KKLWFP L+KD+LEVMF NR+ER +LLE L++S
Sbjct: 178 FASSSELLLPTSVKGLKALLSVAAHKKLWFPDRLHKDYLEVMFTNRQERGDLLEALVVST 237
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KD VPNFPQ++HLLWGE+DQIF ELAHNMKEQLG D TFQGIKKAGHLVHLERPC Y
Sbjct: 238 KDTNVPNFPQKIHLLWGENDQIFKQELAHNMKEQLG-DKATFQGIKKAGHLVHLERPCVY 296
Query: 301 NRCLKQFLASLHAD 314
NR LK FLASL+ D
Sbjct: 297 NRHLKLFLASLNTD 310
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118485686|gb|ABK94693.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/301 (77%), Positives = 267/301 (88%), Gaps = 1/301 (0%)
Query: 16 MKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAE 75
MKMAGVQPH VEIEPGT MNFWVP ET++KP+KGEK + L KP+KPVVVLVHGFAAE
Sbjct: 1 MKMAGVQPHMVEIEPGTVMNFWVPNETVKKPQKGEKKNDTPTLTKPNKPVVVLVHGFAAE 60
Query: 76 GIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLV 135
GIVTWQFQVGALTKKYSVYIPDLLFFGGSITD+ DRSPTFQA+ L GL K+GV+KC+LV
Sbjct: 61 GIVTWQFQVGALTKKYSVYIPDLLFFGGSITDKTDRSPTFQAETLVKGLRKIGVEKCILV 120
Query: 136 GFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKG 195
GFSYGGMV+FK+AELYP+LVQAMV+SGSILAMTDSI+E L+ LG SSSELLLPNSV G
Sbjct: 121 GFSYGGMVAFKMAELYPDLVQAMVISGSILAMTDSISEATLSELGFKSSSELLLPNSVNG 180
Query: 196 LKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255
LKALLSVAT+KKLWFP+ L+KD+LEVMF NRKERAELLEGL+I+NKDPT+P F Q++HLL
Sbjct: 181 LKALLSVATHKKLWFPNRLHKDYLEVMFTNRKERAELLEGLVINNKDPTIPKFVQKIHLL 240
Query: 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHADE 315
WGE+DQIF +E A NMKE+LG + VTFQGI+KAGHLV LERPC YN+CLKQFL SL +E
Sbjct: 241 WGENDQIFKLEHAQNMKEKLG-ETVTFQGIQKAGHLVQLERPCVYNKCLKQFLTSLLENE 299
Query: 316 Q 316
+
Sbjct: 300 E 300
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518259|ref|XP_003629418.1| Epoxide hydrolase [Medicago truncatula] gi|355523440|gb|AET03894.1| Epoxide hydrolase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/316 (75%), Positives = 276/316 (87%), Gaps = 3/316 (0%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKK 60
MVNLVAAQ+PL+ GLMKMAG++P+ VEIE GTTMNFWVP ETI KPKK E+ + A K
Sbjct: 1 MVNLVAAQKPLMHGLMKMAGIRPYTVEIESGTTMNFWVPSETITKPKKKEEKPKITA--K 58
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
+KPVVVLVHGFA+EGIVTWQFQVGALTKKY+VY+PDLLFFGGS TD+ +RSP FQA+CL
Sbjct: 59 TNKPVVVLVHGFASEGIVTWQFQVGALTKKYAVYVPDLLFFGGSTTDKTERSPRFQAECL 118
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
A L KLGV+KC++VGFSYGGMV+FK+AE+YP+LVQA+V+SGSILAMTDSI+ ++L LG
Sbjct: 119 AIALRKLGVEKCIVVGFSYGGMVAFKMAEMYPDLVQALVISGSILAMTDSISVSSLQELG 178
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SSSSELLLPNSVKGLKALLSVA YKKLWFP L+KDFLEVMF NRKER ELL+GL+ISN
Sbjct: 179 FSSSSELLLPNSVKGLKALLSVAAYKKLWFPDRLHKDFLEVMFTNRKERGELLDGLVISN 238
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KD ++PNF QR+HLLWGE+DQIF +ELA NMKEQLG D TF+GIKKAGHLVHLERPC Y
Sbjct: 239 KDVSIPNFSQRIHLLWGENDQIFKLELAQNMKEQLG-DGATFEGIKKAGHLVHLERPCVY 297
Query: 301 NRCLKQFLASLHADEQ 316
NRCLK+F+AS A +
Sbjct: 298 NRCLKKFIASFLASNE 313
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356503026|ref|XP_003520313.1| PREDICTED: epoxide hydrolase 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/312 (72%), Positives = 273/312 (87%), Gaps = 5/312 (1%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALK- 59
MVNLV AQRPLL GLMKMAG++P+ VEIEPGTTM+FWVP ETI KPKK + EK ++
Sbjct: 1 MVNLVVAQRPLLHGLMKMAGIRPYTVEIEPGTTMSFWVPSETITKPKKKD---EKPRIRA 57
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQC 119
KPSKP V+LVHGFAAEGIVTWQFQVGALTKKY+VY+PDLLFFGGS TD+A+RSP QA+C
Sbjct: 58 KPSKPAVILVHGFAAEGIVTWQFQVGALTKKYAVYVPDLLFFGGSTTDKAERSPRLQAEC 117
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179
L L KLGV++CV+VGFSYGGMV+FK+AE+YP +VQ +V+SGSILAM++S++ ++L L
Sbjct: 118 LVAALRKLGVEECVVVGFSYGGMVAFKMAEMYPEMVQGLVISGSILAMSESLSASSLQEL 177
Query: 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLIS 239
GVSSSSELLLP SVKGLKALLS+A +KKLWFP+ L+KD+LEVMF NRKER+ELLEGL+I+
Sbjct: 178 GVSSSSELLLPTSVKGLKALLSIAAHKKLWFPNRLHKDYLEVMFTNRKERSELLEGLVIT 237
Query: 240 NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA 299
N+D T+PNFPQR+HLLWGE+D+IF +ELA +MKEQLG + TF+GIKKAGHLVHLERPC
Sbjct: 238 NRDVTIPNFPQRIHLLWGENDRIFKLELAQSMKEQLG-NGATFEGIKKAGHLVHLERPCV 296
Query: 300 YNRCLKQFLASL 311
YNRCLK +AS
Sbjct: 297 YNRCLKHIIASF 308
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356559398|ref|XP_003547986.1| PREDICTED: epoxide hydrolase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 219/313 (69%), Positives = 266/313 (84%), Gaps = 3/313 (0%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKK 60
MVNLVAAQRPLL GLMKMAGV+P+ VEIEPGT M+FWVP ET+ KPKK + + K
Sbjct: 1 MVNLVAAQRPLLHGLMKMAGVRPYTVEIEPGTVMSFWVPSETLTKPKKKNE--KPRISSK 58
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
PS+P VVLVHGF AEGI+TWQ+QVGALTKKY+VY+PDLLFFGGS TD+ RSP FQAQC+
Sbjct: 59 PSRPAVVLVHGFGAEGIMTWQYQVGALTKKYAVYVPDLLFFGGSTTDKPHRSPAFQAQCV 118
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
GL KLGV+KC++VG+SYGGMV+FK+AE+YP +V+A+V++GSILAMTDSI+ T+L LG
Sbjct: 119 VAGLRKLGVEKCIVVGYSYGGMVAFKMAEMYPEVVEALVITGSILAMTDSISATSLQELG 178
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SSSSELLLP SVKGLKALL+VA++KK W+P+ L KD+LEVM NRKER ELLE L++S+
Sbjct: 179 FSSSSELLLPTSVKGLKALLTVASHKKQWYPNRLLKDYLEVMITNRKERGELLEALVVSD 238
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KD +PNFPQR+HLLWGE+D+IFN+ELA NMKEQLG D TF+ IKKAGH+V++ERP +
Sbjct: 239 KDIIIPNFPQRIHLLWGENDKIFNLELAQNMKEQLG-DGTTFEAIKKAGHMVNMERPRLF 297
Query: 301 NRCLKQFLASLHA 313
NRCLKQF+AS A
Sbjct: 298 NRCLKQFIASFLA 310
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449529100|ref|XP_004171539.1| PREDICTED: monoacylglycerol lipase ABHD6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/316 (72%), Positives = 269/316 (85%), Gaps = 4/316 (1%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKK 60
MVNLVAAQRPLL LMKMAGV P++V+IEPGT MNFWVP IE K +K + +K
Sbjct: 1 MVNLVAAQRPLLHALMKMAGVVPYSVDIEPGTIMNFWVP---IESLPKTKKGQPPKPPQK 57
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P+KPVV+L+HGFAAEGIVTWQFQVGAL+K+YSVY+PDLLFFG SITD+ +RSP FQA+CL
Sbjct: 58 PTKPVVILIHGFAAEGIVTWQFQVGALSKQYSVYVPDLLFFGDSITDKTERSPAFQAECL 117
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
A GL KLG++KC +VGFSYGGMV+FK+ EL P LV AMVVSGSILAMTDSI++ L+RLG
Sbjct: 118 AIGLRKLGIEKCSVVGFSYGGMVAFKLVELRPELVDAMVVSGSILAMTDSISDETLHRLG 177
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SSS+LLLP SVKGLKALLSVA +KKLWFP L+KDFLEVMF NRK+RAELL+GL+ISN
Sbjct: 178 FRSSSDLLLPTSVKGLKALLSVAAHKKLWFPDRLHKDFLEVMFNNRKDRAELLQGLVISN 237
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KD VP F Q++HLLWGE+DQIFNV+LA ++++LG D+ TF+GI KAGHLVHLERPC Y
Sbjct: 238 KDTIVPKFTQKIHLLWGENDQIFNVDLARKLQQELG-DNATFRGIPKAGHLVHLERPCVY 296
Query: 301 NRCLKQFLASLHADEQ 316
NRCLKQFLA+LH+D Q
Sbjct: 297 NRCLKQFLATLHSDAQ 312
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457528|ref|XP_004146500.1| PREDICTED: monoacylglycerol lipase ABHD6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/316 (71%), Positives = 269/316 (85%), Gaps = 4/316 (1%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKK 60
MVNLVAAQRPLL LMKMAGV P++V+IEPGT MNFWVP IE K +K + +K
Sbjct: 1 MVNLVAAQRPLLHALMKMAGVVPYSVDIEPGTIMNFWVP---IESLPKTKKGQPPKPPQK 57
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P+KPVV+L+HGFAAEGIVTWQFQVGAL+K+YSVY+PDLLFFG SITD+ +RSP FQA+CL
Sbjct: 58 PTKPVVILIHGFAAEGIVTWQFQVGALSKQYSVYVPDLLFFGDSITDKTERSPAFQAECL 117
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
A GL KLG++KC +VGFSYGG+V+FK+ EL P LV AMVVSGSILAMTDSI++ L+RLG
Sbjct: 118 AIGLRKLGIEKCSVVGFSYGGVVAFKLVELRPELVDAMVVSGSILAMTDSISDETLHRLG 177
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SSS+LLLP SVKGLKALLSVA +KKLWFP L+KDFLEVMF NRK+RAELL+GL+ISN
Sbjct: 178 FRSSSDLLLPTSVKGLKALLSVAAHKKLWFPDRLHKDFLEVMFNNRKDRAELLQGLVISN 237
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KD VP F Q++HLLWGE+DQIFNV+LA ++++LG D+ TF+GI KAGHLVHLERPC Y
Sbjct: 238 KDTIVPKFTQKIHLLWGENDQIFNVDLARKLQQELG-DNATFRGIPKAGHLVHLERPCVY 296
Query: 301 NRCLKQFLASLHADEQ 316
NRCLKQFLA+LH+D Q
Sbjct: 297 NRCLKQFLATLHSDAQ 312
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 320 | ||||||
| TAIR|locus:2115435 | 317 | AT4G36610 [Arabidopsis thalian | 0.975 | 0.984 | 0.626 | 2.5e-104 | |
| TAIR|locus:2062126 | 313 | AT2G18360 "AT2G18360" [Arabido | 0.975 | 0.996 | 0.633 | 3.2e-104 | |
| TAIR|locus:505006573 | 328 | AT4G39955 [Arabidopsis thalian | 0.753 | 0.734 | 0.331 | 4e-39 | |
| TAIR|locus:2194744 | 314 | AT1G78210 [Arabidopsis thalian | 0.743 | 0.757 | 0.326 | 1.1e-38 | |
| TAIR|locus:2125909 | 307 | AT4G33180 [Arabidopsis thalian | 0.743 | 0.775 | 0.319 | 2.4e-37 | |
| TAIR|locus:2184777 | 311 | AT5G09430 [Arabidopsis thalian | 0.737 | 0.758 | 0.336 | 4.1e-33 | |
| TAIR|locus:2018856 | 332 | AT1G17430 [Arabidopsis thalian | 0.737 | 0.710 | 0.321 | 6e-32 | |
| UNIPROTKB|Q8IUS5 | 362 | EPHX4 "Epoxide hydrolase 4" [H | 0.275 | 0.243 | 0.336 | 1.8e-09 | |
| UNIPROTKB|J9P770 | 290 | EPHX4 "Uncharacterized protein | 0.275 | 0.303 | 0.336 | 4.2e-09 | |
| UNIPROTKB|F1N3G0 | 362 | EPHX4 "Uncharacterized protein | 0.275 | 0.243 | 0.336 | 1.1e-08 |
| TAIR|locus:2115435 AT4G36610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 198/316 (62%), Positives = 243/316 (76%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRXXXXXXXXXXXXXXXXXXXX 60
MVN V Q+PLL GLMKMAGV P+ +EIEPGT +NFWVP+
Sbjct: 1 MVNFVEVQKPLLYGLMKMAGVVPYTLEIEPGTKINFWVPKETLKKNSGTGKPTKPDKPKK 60
Query: 61 XXXXXXXXXHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
HGFA EGIVTWQFQVGAL+KKYSVYIPDLLFFGGS TD +DRSP FQA CL
Sbjct: 61 PVVLLI---HGFAGEGIVTWQFQVGALSKKYSVYIPDLLFFGGSYTDNSDRSPAFQADCL 117
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
GL LGVDK V VGFSYGGMV+FK+AE YP++V+A+VVSGSI MTD+INE +LNRLG
Sbjct: 118 VKGLRILGVDKFVPVGFSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINEASLNRLG 177
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SSS++LLLP SV GLKAL ++A +K LWFP L+KD++EVMF NRKERAELLE +++SN
Sbjct: 178 FSSSTDLLLPTSVTGLKALFTIAVHKPLWFPKRLFKDYIEVMFNNRKERAELLEAVVVSN 237
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
K+ +P+FP+++H LWGE DQIF++ELA +MKEQ+G ++ T + IKKAGHLV LERPC Y
Sbjct: 238 KEAQIPHFPRKIHFLWGESDQIFDLELARDMKEQIG-ENATIESIKKAGHLVQLERPCVY 296
Query: 301 NRCLKQFLASLHADEQ 316
NR LK+FLAS+H++++
Sbjct: 297 NRRLKKFLASIHSEDK 312
|
|
| TAIR|locus:2062126 AT2G18360 "AT2G18360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 199/314 (63%), Positives = 238/314 (75%)
Query: 1 MVNLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRXXXXXXXXXXXXXXXXXXXX 60
MVN V Q+PLL LMK+AGV P+ VE+EPGT MNFW+P+
Sbjct: 1 MVNFVDLQKPLLYRLMKLAGVIPYTVELEPGTKMNFWIPKETLKKTKKSDKNFAVEPQKP 60
Query: 61 XXXXXXXXXHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
HGFAAEGIVTWQFQVG+L KKYSVYIPDLLFFGGS +D ADRSP FQA CL
Sbjct: 61 TKPVLLFI-HGFAAEGIVTWQFQVGSLAKKYSVYIPDLLFFGGSYSDNADRSPAFQAHCL 119
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
L LG++K LVGFSYGGMV+FK+AE YP +VQAMVVSGSILAMTD+I+E+NLN+LG
Sbjct: 120 VKSLRILGIEKFTLVGFSYGGMVAFKIAEEYPEMVQAMVVSGSILAMTDTISESNLNQLG 179
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
SS++LLLP SVKGLK L ++A +K +WFP L+KDF+EVM NRKERAELLE L+ISN
Sbjct: 180 FKSSADLLLPTSVKGLKTLFTLAVHKPMWFPKRLFKDFIEVMITNRKERAELLEALVISN 239
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
KD T+P F Q++HLLWGE DQIFN+E A +MKEQLG ++ T + IKKAGHL HLERPC Y
Sbjct: 240 KDVTIPRFQQKIHLLWGESDQIFNLEFAKSMKEQLG-ENATMESIKKAGHLAHLERPCVY 298
Query: 301 NRCLKQFLASLHAD 314
NR LK+FLAS++++
Sbjct: 299 NRRLKKFLASVYSE 312
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| TAIR|locus:505006573 AT4G39955 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 391 (142.7 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 81/244 (33%), Positives = 132/244 (54%)
Query: 70 HGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV 129
HG A + W + +++VY+PDL+FFG S T DRS +FQA C+ + GV
Sbjct: 56 HGIGANAMWQWDRFIDRFIPRFNVYVPDLIFFGDSYTTRPDRSESFQATCVMKAMDAYGV 115
Query: 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL-GVSSSSELL 188
+ G SYGG V++ +A + V +V+ + +A+ + +E + ++ ++ +L
Sbjct: 116 RTMTVAGLSYGGFVAYSLAAQFKERVDRVVLICAGVALEEKDSEDGMFKVKSPEEAAAVL 175
Query: 189 LPNSVKGLKALLSVATYKK-LWFPSCLYKDFLEVMFANR-KERAELLEGLLISNKDPTVP 246
P S L+ LL ++ YK +W PSC D++ VM + +ER EL+E L + +P
Sbjct: 176 FPQSPSMLRRLLQLSFYKPPIWIPSCFAMDYIHVMCKDYLQERKELVEALHKGRRFANLP 235
Query: 247 NFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQ 306
Q ++WGE+DQ+F VELAH +K LG D +KK GH ++ E+P + +K
Sbjct: 236 KITQPTLMIWGEEDQVFPVELAHRLKRYLGEDRAQLVLLKKTGHAINEEKPKEMYKHMKS 295
Query: 307 FLAS 310
FL +
Sbjct: 296 FLCT 299
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| TAIR|locus:2194744 AT1G78210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 363 (132.8 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 80/245 (32%), Positives = 134/245 (54%)
Query: 70 HGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV 129
HG A I W L++ +++YIPDL+FFGGS T +RS FQAQ L L V
Sbjct: 58 HGLGATAIWQWYDVARRLSRYFNLYIPDLVFFGGSSTTRPERSDIFQAQTLMRALEAQSV 117
Query: 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG-VSSSSELL 188
K LVG SYGG V +++A +Y + V+ +V+ + + + + + + ++ + +S++L
Sbjct: 118 KKFSLVGLSYGGFVGYRMASMYADAVEKVVICCAAVCVEEKDMKAGVFKVSDLDEASKIL 177
Query: 189 LPNSVKGLKALLSVATYKKLW---FPSCLYKDFLEVMFA--NRKERAELLEGLLISNKDP 243
+P SVK L+ L+ YK P+CL DF+E N +E+ EL++ +
Sbjct: 178 VPESVKKLRELMGYIFYKPALARLVPTCLLHDFIEHALTRDNMEEKRELIKAIPKDRIIS 237
Query: 244 TVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRC 303
+P Q ++WGE DQ+F +E+ +++ +G D+ IK+ GH+ + E+P + +
Sbjct: 238 EIPKLKQPTLIIWGEHDQVFPLEMGKRLEKHVG-DNGKLVIIKRTGHIFNFEKPKKFIKL 296
Query: 304 LKQFL 308
LK FL
Sbjct: 297 LKSFL 301
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| TAIR|locus:2125909 AT4G33180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 366 (133.9 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 78/244 (31%), Positives = 139/244 (56%)
Query: 70 HGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG 128
HGF + W+ Q+ A + + VY PDL+FFG S + +R+ FQA+C+A +AK+G
Sbjct: 62 HGFGPSSMWQWRRQMQAFSPSAFRVYSPDLVFFGDSTSSSTNRTEVFQAECMAKLMAKIG 121
Query: 129 VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELL 188
+ K + G SYGG V++ +A+++P V+ +V++ S + M E+ L R +++
Sbjct: 122 IGKYNVAGTSYGGFVAYHMAKMWPEKVEKVVIASSGINMRKCDGESLLQRSNCECIEKVM 181
Query: 189 LPNSVKGLKALLSVATYKKL--WFPSCLYKDFLEVMFA-NRKERAELLEGLLISNKDP-T 244
LP++ + L+++A+ +L FP L+ D + ++ NRKE+ ELL+G+ +
Sbjct: 182 LPSTATEFRTLMALASSWRLVRMFPDALWNDVINNLYKKNRKEKIELLKGVTFGRSENLN 241
Query: 245 VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCL 304
+ + Q V ++WG+ DQIF V++A+ +KE LG D + I H+ +E +N +
Sbjct: 242 IDSLSQEVLIVWGDKDQIFPVKMAYELKEILG-DKTKLEIIDNTSHVPQIECAQEFNNIV 300
Query: 305 KQFL 308
+FL
Sbjct: 301 LRFL 304
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| TAIR|locus:2184777 AT5G09430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 82/244 (33%), Positives = 141/244 (57%)
Query: 70 HGFAAEGIVTWQF--QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL 127
HGF A + WQ+ + A T +++VY+PDLLFFG S T E +R+ +FQA+CL +
Sbjct: 67 HGFGANAM--WQYGEHLRAFTGRFNVYVPDLLFFGLSSTSEPNRTESFQARCLMRLMEAH 124
Query: 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL-GVSSSSE 186
GV + +VG SYGG V + +A +P V+ +V+ + + + + E L ++ + ++
Sbjct: 125 GVQRMNIVGISYGGFVGYSLAAQFPENVEKLVLCCAGVCLEEKDMEDGLFKVPNLEEATG 184
Query: 187 LLLPNSVKGLKALLSVATYKKL-WFPSCLYKDFLEVMFANR-KERAELLEGLLISNKDPT 244
+L+P + + LK L+ + K + PS DF++VM +E+ +L++ +L +
Sbjct: 185 ILIPQTPEKLKELIRFSFVKPIKGVPSFFLWDFIDVMCTEFVEEKRDLIKSILKDRRLSD 244
Query: 245 VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCL 304
+P Q+ ++WGE+DQIF +EL + +K +G + IKKAGH V+LE+ + + L
Sbjct: 245 LPRIKQKSLIIWGEEDQIFPLELGYRLKRHIG-ESAEIVVIKKAGHAVNLEKSKEFVKHL 303
Query: 305 KQFL 308
K FL
Sbjct: 304 KSFL 307
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| TAIR|locus:2018856 AT1G17430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 81/252 (32%), Positives = 136/252 (53%)
Query: 70 HGFAAEGIVTWQF--QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL 127
HG+ G WQF QV L+K ++++IPDL+FFG S + DRS QA+ + GL KL
Sbjct: 85 HGYG--GNSKWQFVHQVSDLSKSFNLFIPDLVFFGKSYSKNRDRSVEIQARSVVGGLKKL 142
Query: 128 GVDK----CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSS 183
G + + SYGG V++K+AE++P +V+ +V+ S + T L + G
Sbjct: 143 GCVEGGGGISIYSISYGGFVAYKMAEIWPAMVEKLVIVSSGVGFTQQQKTAELKKHG-GD 201
Query: 184 SSELLLPNSVKGLKALLSVATYKKL----WFPSCLYKDFLEVMFA-NRKERAELLEGLLI 238
S++L+P + L+ L+ ++ L W P F+ VM+ NR+E EL + LL
Sbjct: 202 CSKILVPKTPMDLRLLIKISMNTGLTFVDWVPDFFLSQFIAVMYEKNRQELLELAKNLLE 261
Query: 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298
++P +P Q+ ++WG+ D++F +E A+ ++ L + + IK+ GH V++E P
Sbjct: 262 REEEPELPVISQKTLIVWGDKDKVFPLEHAYRLQRHLQSSRLEI--IKETGHAVNIEAPT 319
Query: 299 AYNRCLKQFLAS 310
N + F+ S
Sbjct: 320 TLNNFITSFVLS 331
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| UNIPROTKB|Q8IUS5 EPHX4 "Epoxide hydrolase 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 135 (52.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 70 HGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATG----LA 125
HGF E +W++Q+ +Y V DL +G TD ++ CL T L
Sbjct: 100 HGFP-EFWYSWRYQLREFKSEYRVVALDLRGYGE--TDAPIHRQNYKLDCLITDIKDILD 156
Query: 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
LG KCVL+G +GGM+++ +A YP +V ++V
Sbjct: 157 SLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIV 191
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| UNIPROTKB|J9P770 EPHX4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 131 (51.2 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 70 HGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATG----LA 125
HGF E +W+ Q+ +Y V DL +G TD ++ CL T L
Sbjct: 28 HGFP-EFWYSWRHQLREFKSEYRVVALDLRGYGE--TDAPIHRENYKLDCLITDIKDILD 84
Query: 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
LG KCVL+G +GGM+++ +A YP +V ++V
Sbjct: 85 SLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIV 119
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| UNIPROTKB|F1N3G0 EPHX4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 131 (51.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 70 HGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATG----LA 125
HGF E +W+ Q+ +Y V DL +G S D ++ CL T L
Sbjct: 100 HGFP-EFWYSWRHQLREFKSEYRVVALDLRGYGES--DAPVHRENYKLDCLITDIKDILE 156
Query: 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
LG KCVL+G +GGM+++ +A YP +V ++V
Sbjct: 157 SLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIV 191
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh4_pm.C_LG_VII000420 | SubName- Full=Putative uncharacterized protein; (317 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.IV.348.1 | hypothetical protein (297 aa) | • | 0.402 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 320 | |||
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 3e-27 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 5e-23 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 1e-19 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 6e-17 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 2e-12 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 4e-09 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 4e-09 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 5e-08 | |
| TIGR03343 | 282 | TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenyl | 1e-07 | |
| PLN02679 | 360 | PLN02679, PLN02679, hydrolase, alpha/beta fold fam | 2e-07 | |
| PLN02980 | 1655 | PLN02980, PLN02980, 2-oxoglutarate decarboxylase/ | 2e-06 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 4e-06 | |
| TIGR01738 | 245 | TIGR01738, bioH, pimelyl-[acyl-carrier protein] me | 1e-05 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 9e-05 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 2e-04 | |
| PLN02894 | 402 | PLN02894, PLN02894, hydrolase, alpha/beta fold fam | 3e-04 | |
| PRK11126 | 242 | PRK11126, PRK11126, 2-succinyl-6-hydroxy-2,4-cyclo | 6e-04 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 6e-04 | |
| PRK10349 | 256 | PRK10349, PRK10349, carboxylesterase BioH; Provisi | 7e-04 | |
| PRK08775 | 343 | PRK08775, PRK08775, homoserine O-acetyltransferase | 0.002 | |
| COG1075 | 336 | COG1075, LipA, Predicted acetyltransferases and hy | 0.002 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 0.003 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 107 bits (267), Expect = 3e-27
Identities = 71/271 (26%), Positives = 100/271 (36%), Gaps = 23/271 (8%)
Query: 59 KKPSKPVVVLVHGFAAEGIVT-WQFQVGA-LTKKYSVYIPDLLFFGGSITDEADRSPTFQ 116
P +VL+HGF V F+V L +Y V PDL G S D A S +
Sbjct: 17 AGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRS--DPAGYSLSAY 74
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
A LA L LG++K VLVG S GG V+ +A +P+ V+ +V+ G A + E L
Sbjct: 75 ADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGP--APPPGLLEAAL 132
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAEL---- 232
+ ++ L + A + + + A R
Sbjct: 133 RQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAA 192
Query: 233 ------------LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280
L LL + + ++ GEDD + ELA + L
Sbjct: 193 FARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DA 251
Query: 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311
I AGH HLE P A+ L FL L
Sbjct: 252 RLVVIPGAGHFPHLEAPEAFAAALLAFLERL 282
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 93.6 bits (233), Expect = 5e-23
Identities = 60/233 (25%), Positives = 76/233 (32%), Gaps = 53/233 (22%)
Query: 66 VVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS-ITDEADRSPTFQAQCLATGL 124
VVL+HG +W+ AL Y V PDL G S S A LA L
Sbjct: 1 VVLLHGAGG-SAESWRPLAEALAAGYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAALL 59
Query: 125 AKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSS 184
LG+ VLVG S GG V+ A P V +V+ L + +
Sbjct: 60 DALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPLRDLEELLA----------- 108
Query: 185 SELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPT 244
A L + L D E + T
Sbjct: 109 ---------------ADAAALLALLRAALLDADLREAL------------------ARLT 135
Query: 245 VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297
VP V ++ GEDD + E A + E L + AGHL HLE P
Sbjct: 136 VP-----VLVIHGEDDPLVPPEAARRLAEALP--GAELVVLPGAGHLPHLEHP 181
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 1e-19
Identities = 67/303 (22%), Positives = 109/303 (35%), Gaps = 50/303 (16%)
Query: 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV 78
AG P I G T+ + + GE VVL+HGF + +
Sbjct: 107 AGPAPRKARI-GGRTVRYL---------RLGEG----------DGTPVVLIHGFGGD-LN 145
Query: 79 TWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFS 138
W F AL V DL G S S A + L LG+++ LVG S
Sbjct: 146 NWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHS 205
Query: 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKA 198
GG V+ ++A P V ++ + + IN ++ V++ S +K +
Sbjct: 206 MGGAVALRLAARAPQRVASLTLIAPA-GLGPEINGDYIDGF-VAAESR----RELKPVLE 259
Query: 199 LLSVATYKKLWFPSCLYKDFLEVMFANRK--ERAELLEGLLISNKD---------PTVPN 247
LL P+ + + +E + ++ + L L + + +
Sbjct: 260 LLFAD-------PALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLAS 312
Query: 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQF 307
V ++WGE D+I A + D V + AGH+ +E NR L +F
Sbjct: 313 LAIPVLVIWGEQDRIIPAAHAQGL-----PDGVAVHVLPGAGHMPQMEAAADVNRLLAEF 367
Query: 308 LAS 310
L
Sbjct: 368 LGK 370
|
Length = 371 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 6e-17
Identities = 49/230 (21%), Positives = 85/230 (36%), Gaps = 22/230 (9%)
Query: 93 VYIPDLLFFGGS---ITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149
V DL FG S R A+ L L LG+DK LVG S GG+++ A
Sbjct: 3 VIAFDLRGFGRSSPPKDFADYRFDDL-AEDLEALLDALGLDKVNLVGHSMGGLIALAYAA 61
Query: 150 LYPNLVQAMVVSGSIL--AMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207
YP+ V+A+V+ G++ ++ + + + L +SV+ L
Sbjct: 62 KYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIKQFQAL 121
Query: 208 LWFPSCLYKDFLEVMFANRKERA-----------ELLEGLLISNKDPTVPNFPQRVHLLW 256
DFL+ + R L L+ ++ + + ++W
Sbjct: 122 GRPFV---SDFLKQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAALKDIDVPTLIIW 178
Query: 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQ 306
G+DD + + + + + I AGHL LE+P + +
Sbjct: 179 GDDDPLVPPDASEKLAALFP--NAQLVVIDDAGHLAQLEKPDEVAELILK 226
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 2e-12
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQC-- 119
+KPV+V +HGF G WQ + L + DL G S + F+
Sbjct: 1 AKPVLVFLHGFLGSG-ADWQALIELLGPHFRCLAIDLPGHGSSQSPSDIERYDFEEIAQL 59
Query: 120 -LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
LAT L +LG++ LVG+S GG ++ A YP VQ +++
Sbjct: 60 LLATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESG 104
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 4e-09
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 66 VVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA 125
+VL+HGF A W++ + L KKY VY DLL FG S + +A +
Sbjct: 89 IVLIHGFGAS-AFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVK 147
Query: 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
++ + VLVG S GG + A YP LV + + S
Sbjct: 148 EVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185
|
Length = 354 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 4e-09
Identities = 64/274 (23%), Positives = 96/274 (35%), Gaps = 39/274 (14%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQ-- 116
+P K VVVLVHG E ++ L + + VY DL G S + +F
Sbjct: 31 EPPKGVVVLVHGLG-EHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADY 89
Query: 117 ---AQCLATGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172
+A+ L+G S GG+++ YP + +V+S L + +I
Sbjct: 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAIL 149
Query: 173 ETNLNRLGVSSSSELLL-----PNSVKGLKA-LLS-----VATYKKLWFPSCLYKD---- 217
L RL + + N ++G+ LS VA Y+ P
Sbjct: 150 RLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEA--DPLIGVGGPVSR 207
Query: 218 -FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIF-NVELAHNMKEQL 275
+ A R +P V LL G DD++ NVE E+
Sbjct: 208 WVDLALLAGRVPALR-------DAPAIALP-----VLLLQGGDDRVVDNVEGLARFFERA 255
Query: 276 GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
G+ + I A H + E A LK LA
Sbjct: 256 GSPDKELKVIPGAYHELLNEPDRAREEVLKDILA 289
|
Length = 298 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 5e-08
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 65 VVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATG 123
+VVL+HG + + AL + Y+V D G S A + A
Sbjct: 1 LVVLLHGAGGD-PEAYAPLARALASRGYNVVAVDYPGHGAS--LGAPDAEAVLAD----- 52
Query: 124 LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
A L ++ VLVG S GG V+ +A P + A+V++
Sbjct: 53 -APLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAG 91
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|132386 TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 1e-07
Identities = 62/270 (22%), Positives = 104/270 (38%), Gaps = 47/270 (17%)
Query: 66 VVLVHGFA--AEGIVTWQFQVGALTKK-YSVYIPDLLFFGGS---ITDEADRSPTFQAQC 119
V+++HG A G + +G Y V + D F S + DE + A+
Sbjct: 33 VIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDE--QRGLVNARA 90
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179
+ + L ++K LVG S GG + A YP+ + +++ G L
Sbjct: 91 VKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGP-------------GGL 137
Query: 180 GVSSSSELLLPNSVKGLKALL------SVATYKK-----LWFPSCLYKDFLEVMFANRKE 228
G S L P ++G+K L S T K+ L+ S + ++ L+ + N +
Sbjct: 138 GPS----LFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQR 193
Query: 229 RAELLEGLLISNK---------DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADH 279
+ E L+ LIS++ + + + WG DD+ V L H +K
Sbjct: 194 QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRF--VPLDHGLKLLWNMPD 251
Query: 280 VTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
+ GH E A+NR + FL
Sbjct: 252 AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. Length = 282 |
| >gnl|CDD|178283 PLN02679, PLN02679, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 2e-07
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ---- 116
S P V+LVHGF A I W+ +G L K Y+VY DLL FG S D+ P F
Sbjct: 86 SSGPPVLLVHGFGAS-IPHWRRNIGVLAKNYTVYAIDLLGFGAS-----DKPPGFSYTME 139
Query: 117 --AQCLATGLAKLGVDKCVLVGFSYGGMVS-FKVAELYPNLVQAMVV 160
A+ + L ++ VL+G S G + +E +LV+ +V+
Sbjct: 140 TWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVL 186
|
Length = 360 |
| >gnl|CDD|215530 PLN02980, PLN02980, 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 70/286 (24%), Positives = 114/286 (39%), Gaps = 36/286 (12%)
Query: 55 KEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS----ITDEAD 110
E + VV+ +HGF G W + A++ DL GGS E
Sbjct: 1363 HEVGQNAEGSVVLFLHGFLGTG-EDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQ 1421
Query: 111 RSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQ-AMVVSGSIL 165
PT + +A L KL K LVG+S G ++ +A + + ++ A+++SGS
Sbjct: 1422 TEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSP- 1480
Query: 166 AMTDSINETNLNRLGVSSS-SELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFA 224
+ D R S + +L+ + GL+ L +LW + F +++ +
Sbjct: 1481 GLKD--EVARKIRSAKDDSRARMLIDH---GLEIFLENWYSGELWKSLRNHPHFNKIVAS 1535
Query: 225 -----NRKERAELLEGLLISNKDPTVPNFPQ---RVHLLWGEDDQIFNVELAHNMKEQLG 276
+ A+LL L I + + Q + L+ GE D F ++A M ++G
Sbjct: 1536 RLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIG 1594
Query: 277 ADHVTFQGIKK----------AGHLVHLERPCAYNRCLKQFLASLH 312
+ K GH VHLE P R L++FL LH
Sbjct: 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640
|
Length = 1655 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 4e-06
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHLVHLERPCAYN 301
P + V L GE D+ F V++A M++ + V AGH +HLE P A+
Sbjct: 189 PKLQALKIPVLYLCGEKDEKF-VQIAKEMQKLIPNLTLVIIAN---AGHNIHLENPEAFA 244
Query: 302 RCLKQFL 308
+ L FL
Sbjct: 245 KILLAFL 251
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|130799 TIGR01738, bioH, pimelyl-[acyl-carrier protein] methyl ester esterase | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 1e-05
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL--- 120
+VL+HG+ V ++ L+ +++++ DL G RS F L
Sbjct: 5 VHLVLIHGWGMNAEV-FRCLDEELSAHFTLHLVDLPGHG--------RSRGFGPLSLADA 55
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
A +A D + +G+S GG+V+ +A +P+ V+A+V S
Sbjct: 56 AEAIAAQAPDPAIWLGWSLGGLVALHIAATHPDRVRALVTVAS 98
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (Pfam model pfam00561). Members of this family are restricted to the Proteobacteria [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 245 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 9e-05
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ--AQCLA 121
P+++L+HG A +W+ + L + + V PDL G + R T A+ L+
Sbjct: 29 PLLLLLHGTGAST-HSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFR-FTLPSMAEDLS 86
Query: 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159
A G+ ++G S G ++ ++A P + +V
Sbjct: 87 ALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVV 124
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
PV+V ++ + + W + ALT + V D G S E S A +
Sbjct: 11 DGAPVLVFINSLGTD-LRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDV 69
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
L LG+++ V G S GG+++ +A P+ V+A+V+S +
Sbjct: 70 LALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNT 112
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|215484 PLN02894, PLN02894, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 59 KKPSKPVVVLVHGFAA-EGIVTWQFQVGALTKKYSVYIPDLLFFGGS--------ITDEA 109
K P +V+VHG+ A +G F AL ++ V D L +GGS T+E
Sbjct: 101 SKEDAPTLVMVHGYGASQGFFFRNFD--ALASRFRVIAIDQLGWGGSSRPDFTCKSTEET 158
Query: 110 DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
+ + + +L+G S+GG V+ K A +P VQ +++ G
Sbjct: 159 E---AWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGP 209
|
Length = 402 |
| >gnl|CDD|236855 PRK11126, PRK11126, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 6e-04
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 8/68 (11%)
Query: 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNR 302
P + + L GE D F + +QL I AGH H E P A+
Sbjct: 182 PALQALTFPFYYLCGERDSKF-----QALAQQLALPLHV---IPNAGHNAHRENPAAFAA 233
Query: 303 CLKQFLAS 310
L Q L
Sbjct: 234 SLAQILRL 241
|
Length = 242 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYI---------PDLLFFGGSITDEADRSPT 114
PVVVL G G W Q+ LT+++ V P L SI AD
Sbjct: 13 PVVVLSSGLGGSG-SYWAPQLAVLTQRFHVVTYDHRGTGRSPGELPPDYSIAHMADD--- 68
Query: 115 FQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
+ L LG+++ VG + GG++ ++A YP + ++V+
Sbjct: 69 -----VLQLLDALGIERFHFVGHALGGLIGLQLALDYPERLTSLVL 109
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|137836 PRK10349, PRK10349, carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 7e-04
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 66 VVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL---AT 122
+VL+HG+ V W+ L+ +++++ DL FG RS F A L A
Sbjct: 16 LVLLHGWGLNAEV-WRCIDEELSSHFTLHLVDLPGFG--------RSRGFGALSLADMAE 66
Query: 123 GLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
+ + DK + +G+S GG+V+ ++A +P VQA+V S
Sbjct: 67 AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107
|
Length = 256 |
| >gnl|CDD|181553 PRK08775, PRK08775, homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 112 SPTFQAQCLATGLAKLGVDKC-VLVGFSYGGMVSFKVAELYPNLVQAMVV 160
QA +A L LG+ + VG+SYG +V + A +P V+ +VV
Sbjct: 119 DTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVV 168
|
Length = 343 |
| >gnl|CDD|224001 COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 31/133 (23%), Positives = 44/133 (33%), Gaps = 24/133 (18%)
Query: 66 VVLVHGF-----AAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
+VLVHG + +G LT VY + G + Q
Sbjct: 62 IVLVHGLGGGYGNFLPLDYRLAILGWLTNG--VYAFE---LSGGDGTYSLAVRG--EQLF 114
Query: 121 AT---GLAKLGVDKCVLVGFSYGGMVSFKVAELYP--NLVQAMVV-----SGSILAMTDS 170
A LAK G K L+G S GG+ S + N V ++V G+ + D
Sbjct: 115 AYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT--ELADL 172
Query: 171 INETNLNRLGVSS 183
+ R G
Sbjct: 173 VGLLIYVRSGEGL 185
|
Length = 336 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.003
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 55/217 (25%)
Query: 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET--NLNRLGVSS 183
KLG+DK L+G S+GGM++ + A Y ++ +++S M DS E LNRL
Sbjct: 93 KLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISS----MLDSAPEYVKELNRL---- 144
Query: 184 SSELLLPNSVKGLKALLSVAT-----YKKL-------------WFPSCLYK-------DF 218
+ L P +K + Y++ +P L +
Sbjct: 145 -RKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRLRKWPEALKHLKSGGNTNV 203
Query: 219 LEVMFANRKERAELLEGLL----ISNK--DPTVPNFPQRVHLLWGEDDQIFNVELAHNMK 272
+M + + G L I++K + VP L GE D + E A M+
Sbjct: 204 YNIMQGPNEFT---ITGNLKDWDITDKLSEIKVPTL-----LTVGEFDTM-TPEAAREMQ 254
Query: 273 EQL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
E + G+ V F H+ +E P Y + L F+
Sbjct: 255 ELIAGSRLVVFP---DGSHMTMIEDPEVYFKLLSDFI 288
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 100.0 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 100.0 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 100.0 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 100.0 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| PRK07581 | 339 | hypothetical protein; Validated | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 100.0 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.98 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.98 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.98 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.98 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.98 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.97 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.97 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.97 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.97 | |
| PLN02511 | 388 | hydrolase | 99.97 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.97 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.96 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.96 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.96 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.95 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.95 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.95 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.95 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.94 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.94 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.93 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.92 | |
| PRK10566 | 249 | esterase; Provisional | 99.92 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.92 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.91 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.91 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.9 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.9 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.89 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.89 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.88 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.88 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.88 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.87 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.86 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.86 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.85 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.85 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.84 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.83 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.83 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.83 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.82 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.81 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.81 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.8 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.79 | |
| PLN00021 | 313 | chlorophyllase | 99.78 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.77 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.77 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.75 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.74 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.73 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.73 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.72 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.72 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.71 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.71 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.69 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.69 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.69 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.68 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.68 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.66 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.65 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.63 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.61 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.61 | |
| PRK10115 | 686 | protease 2; Provisional | 99.61 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.61 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.58 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.56 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.54 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.52 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.51 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.51 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.51 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.51 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.48 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.46 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.44 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 99.43 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.42 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.42 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 99.42 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.39 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.39 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.37 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.37 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.36 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.35 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.34 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.34 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.32 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.3 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.3 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.27 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.27 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.26 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.24 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.19 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 99.16 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.14 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.13 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 99.13 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 99.11 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.09 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.07 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 99.06 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.99 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.97 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.95 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.95 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.95 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.95 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.92 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.88 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.86 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.85 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.81 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.8 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.77 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.75 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.74 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.74 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.68 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.65 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.62 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.61 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.57 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.54 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 98.54 | |
| PLN02209 | 437 | serine carboxypeptidase | 98.52 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.51 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 98.49 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.43 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 98.41 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.4 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 98.39 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 98.36 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.36 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.35 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.33 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.22 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.21 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.2 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 98.2 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 98.19 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.18 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.07 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.04 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.02 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.95 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.92 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.82 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.81 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 97.75 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 97.73 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 97.51 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.51 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.49 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 97.45 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 97.45 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.42 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.41 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 97.4 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.38 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 97.31 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.29 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 97.06 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.03 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.93 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 96.86 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 96.84 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.74 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.74 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.68 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 96.64 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 96.58 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.5 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 96.5 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 96.49 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 96.45 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.44 | |
| PLN00413 | 479 | triacylglycerol lipase | 96.42 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.29 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.21 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.19 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 95.99 | |
| PLN02408 | 365 | phospholipase A1 | 95.9 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 95.78 | |
| PLN02310 | 405 | triacylglycerol lipase | 95.7 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 95.64 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 95.59 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.52 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.44 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 95.41 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.14 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.08 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.05 | |
| PLN02761 | 527 | lipase class 3 family protein | 94.85 | |
| PLN02719 | 518 | triacylglycerol lipase | 94.82 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 94.04 | |
| PLN02847 | 633 | triacylglycerol lipase | 93.99 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 93.6 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 91.51 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 91.39 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 91.12 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 91.12 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 91.12 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 90.54 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 89.6 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 88.92 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 85.92 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 83.73 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=257.54 Aligned_cols=265 Identities=22% Similarity=0.236 Sum_probs=181.5
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
.++.+++++ +|.+++|...|+ ++++|||+||+++++. .|..+++.|+++++|+++|+|
T Consensus 7 ~~~~~~~~~-~~~~i~y~~~G~--------------------~~~~vlllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dlp 64 (294)
T PLN02824 7 QVETRTWRW-KGYNIRYQRAGT--------------------SGPALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLL 64 (294)
T ss_pred CCCCceEEE-cCeEEEEEEcCC--------------------CCCeEEEECCCCCChh-HHHHHHHHHHhCCeEEEEcCC
Confidence 456778888 699999988774 4589999999999999 999999999988999999999
Q ss_pred CCCCCCCCC-------CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc
Q 020916 100 FFGGSITDE-------ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172 (320)
Q Consensus 100 G~G~s~~~~-------~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 172 (320)
|||.|+.+. ..++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.........
T Consensus 65 G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~ 144 (294)
T PLN02824 65 GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKK 144 (294)
T ss_pred CCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccc
Confidence 999998654 2488999999999999999999999999999999999999999999999999997653211000
Q ss_pred ccccccccccccccccCc-----------CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhc-c-
Q 020916 173 ETNLNRLGVSSSSELLLP-----------NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI-S- 239 (320)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 239 (320)
...............+.. .........+...........++..+.+..... . ......+..+.. .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 222 (294)
T PLN02824 145 QPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGL-E-PGAVDVFLDFISYSG 222 (294)
T ss_pred cchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccC-C-chHHHHHHHHhcccc
Confidence 000000000000000000 000011111111111111111111111111000 0 000111111110 1
Q ss_pred --CCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 240 --NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 240 --~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
.....++++++|+++|+|++|..++.+..+.+.+..+ +.++++++++||++++|+|+++++.|.+|+++
T Consensus 223 ~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 223 GPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDA--VEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCC--ccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 1124577899999999999999999999988877766 78999999999999999999999999999976
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=245.59 Aligned_cols=263 Identities=18% Similarity=0.161 Sum_probs=180.8
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG 102 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G 102 (320)
.+++.+ +|.+++|+..+. ...+++|||+||++++.. .|..+++.|.+.|+|+++|+||||
T Consensus 4 ~~~~~~-~~~~~~~~~~~~------------------~~~~~plvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G 63 (276)
T TIGR02240 4 FRTIDL-DGQSIRTAVRPG------------------KEGLTPLLIFNGIGANLE-LVFPFIEALDPDLEVIAFDVPGVG 63 (276)
T ss_pred EEEecc-CCcEEEEEEecC------------------CCCCCcEEEEeCCCcchH-HHHHHHHHhccCceEEEECCCCCC
Confidence 456777 799999977431 024579999999999999 999999999888999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc-ccccccccc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN-ETNLNRLGV 181 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~ 181 (320)
.|+.+...++++.+++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++......... .......
T Consensus 64 ~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-- 141 (276)
T TIGR02240 64 GSSTPRHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMM-- 141 (276)
T ss_pred CCCCCCCcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHh--
Confidence 9987666788999999999999999999999999999999999999999999999999998764221100 0000000
Q ss_pred cccccccCcCc-HHHHHHHHhHhhhccccCCchhHHHHHHHHhcChh--hHHHHhhhhhccCCCCCCCCCCCcEEEEecC
Q 020916 182 SSSSELLLPNS-VKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK--ERAELLEGLLISNKDPTVPNFPQRVHLLWGE 258 (320)
Q Consensus 182 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 258 (320)
........... .......+. ......+.....+......... ......... .......+.++++|+++|+|+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~ 216 (276)
T TIGR02240 142 ASPRRYIQPSHGIHIAPDIYG----GAFRRDPELAMAHASKVRSGGKLGYYWQLFAGL-GWTSIHWLHKIQQPTLVLAGD 216 (276)
T ss_pred cCchhhhccccccchhhhhcc----ceeeccchhhhhhhhhcccCCCchHHHHHHHHc-CCchhhHhhcCCCCEEEEEeC
Confidence 00000000000 000000000 0000011111111111110000 000111111 111124468899999999999
Q ss_pred CCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhcc
Q 020916 259 DDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHADE 315 (320)
Q Consensus 259 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 315 (320)
+|++++++..+.+.+.++ +.+++++++ ||+++.++|+++++.|.+|+++..+..
T Consensus 217 ~D~~v~~~~~~~l~~~~~--~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~~~ 270 (276)
T TIGR02240 217 DDPIIPLINMRLLAWRIP--NAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQRA 270 (276)
T ss_pred CCCcCCHHHHHHHHHhCC--CCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhhhc
Confidence 999999999999999998 889999985 999999999999999999999877654
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=245.73 Aligned_cols=266 Identities=16% Similarity=0.176 Sum_probs=177.8
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
..+.+++++ +|.+++|...| ++++|||+||++++.. .|+.+++.|.+.++|+++|+|
T Consensus 6 ~~~~~~~~~-~g~~i~y~~~G---------------------~g~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~D~~ 62 (295)
T PRK03592 6 PGEMRRVEV-LGSRMAYIETG---------------------EGDPIVFLHGNPTSSY-LWRNIIPHLAGLGRCLAPDLI 62 (295)
T ss_pred CCcceEEEE-CCEEEEEEEeC---------------------CCCEEEEECCCCCCHH-HHHHHHHHHhhCCEEEEEcCC
Confidence 455667777 79999998776 4589999999999999 999999999988999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc--cccc--
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI--NETN-- 175 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~-- 175 (320)
|||.|+.+...++.+.+++|+.+++++++.++++++|||+||.+|+.++.++|++|+++|++++........ ....
T Consensus 63 G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~ 142 (295)
T PRK03592 63 GMGASDKPDIDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRE 142 (295)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHH
Confidence 999999877678999999999999999999999999999999999999999999999999999843221100 0000
Q ss_pred -cccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHH---HHhhhhh-----------ccC
Q 020916 176 -LNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA---ELLEGLL-----------ISN 240 (320)
Q Consensus 176 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----------~~~ 240 (320)
...+....................+.... ...+.++....+...+. ...... .+...+. ..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (295)
T PRK03592 143 LFQALRSPGEGEEMVLEENVFIERVLPGSI--LRPLSDEEMAVYRRPFP-TPESRRPTLSWPRELPIDGEPADVVALVEE 219 (295)
T ss_pred HHHHHhCcccccccccchhhHHhhcccCcc--cccCCHHHHHHHHhhcC-CchhhhhhhhhhhhcCCCCcchhhHhhhhH
Confidence 00000000000000000000000000000 00111111111111111 000000 0000000 001
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCCHHHHHHH-HHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNM-KEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 241 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
....+.++++|+|+|+|++|.++++.....+ .+..+ +.++++++++||+++.++|+++++.|.+|+++...
T Consensus 220 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 220 YAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPN--QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred hHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhh--hcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 1234677899999999999999955444444 45566 88999999999999999999999999999997654
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=228.73 Aligned_cols=274 Identities=18% Similarity=0.296 Sum_probs=191.6
Q ss_pred HhcCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEe
Q 020916 17 KMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYI 95 (320)
Q Consensus 17 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~ 95 (320)
...+++.+++.. +|.+++|.+.++ +++|.|+++||++.+.. +|+.++..|+.. |+|+|
T Consensus 18 ~~~~~~hk~~~~-~gI~~h~~e~g~-------------------~~gP~illlHGfPe~wy-swr~q~~~la~~~~rviA 76 (322)
T KOG4178|consen 18 NLSAISHKFVTY-KGIRLHYVEGGP-------------------GDGPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIA 76 (322)
T ss_pred ChhhcceeeEEE-ccEEEEEEeecC-------------------CCCCEEEEEccCCccch-hhhhhhhhhhhcceEEEe
Confidence 355788899999 689999988876 58999999999999999 999999999999 99999
Q ss_pred cCCCCCCCCCCCCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 96 PDLLFFGGSITDEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 96 ~d~~G~G~s~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
+|+||+|.|+.+.. .++...++.|+..++++++.++++++||+|||++|..+|..+|++|+++|+++.+...+.....
T Consensus 77 ~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~ 156 (322)
T KOG4178|consen 77 PDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPL 156 (322)
T ss_pred cCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchh
Confidence 99999999998874 5999999999999999999999999999999999999999999999999999987652111110
Q ss_pred ccccc-----c-----cccccccccC-cCcHHHHHHHHhHhhhc------------cccCCchhHHHHHHHHh-cChhhH
Q 020916 174 TNLNR-----L-----GVSSSSELLL-PNSVKGLKALLSVATYK------------KLWFPSCLYKDFLEVMF-ANRKER 229 (320)
Q Consensus 174 ~~~~~-----~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~~~ 229 (320)
..... . ......+... ....+.+...+...... ..|..++..+.+..... ......
T Consensus 157 ~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gp 236 (322)
T KOG4178|consen 157 DSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGP 236 (322)
T ss_pred hhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccccc
Confidence 00000 0 0000000000 00111111111100000 11222222222222221 112222
Q ss_pred HHHhhhhhccC--CCCCCCCCCCcEEEEecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHH
Q 020916 230 AELLEGLLISN--KDPTVPNFPQRVHLLWGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQ 306 (320)
Q Consensus 230 ~~~~~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 306 (320)
......+.... ....+..+++|+++|+|+.|.+.+.. ....+.+.++ ...+.++++|+||+++.|+|+++++.|.+
T Consensus 237 lNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp-~l~~~vv~~~~gH~vqqe~p~~v~~~i~~ 315 (322)
T KOG4178|consen 237 LNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVP-RLTERVVIEGIGHFVQQEKPQEVNQAILG 315 (322)
T ss_pred chhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhc-cccceEEecCCcccccccCHHHHHHHHHH
Confidence 33444444443 23566789999999999999998766 3445555666 23378899999999999999999999999
Q ss_pred HHHhhh
Q 020916 307 FLASLH 312 (320)
Q Consensus 307 fl~~~~ 312 (320)
|+++..
T Consensus 316 f~~~~~ 321 (322)
T KOG4178|consen 316 FINSFS 321 (322)
T ss_pred HHHhhc
Confidence 998753
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=247.82 Aligned_cols=269 Identities=24% Similarity=0.275 Sum_probs=174.3
Q ss_pred eEEEcCCCc-eeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC
Q 020916 24 HAVEIEPGT-TMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG 102 (320)
Q Consensus 24 ~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G 102 (320)
+++.. +|. +++|...|+.+. ...+|+|||+||++++.. .|..+++.|.+.|+|+++|+||||
T Consensus 64 ~~~~~-~g~~~i~Y~~~G~g~~---------------~~~gp~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G 126 (360)
T PLN02679 64 KKWKW-KGEYSINYLVKGSPEV---------------TSSGPPVLLVHGFGASIP-HWRRNIGVLAKNYTVYAIDLLGFG 126 (360)
T ss_pred ceEEE-CCceeEEEEEecCccc---------------CCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCC
Confidence 44555 455 888877664100 014689999999999999 999999999888999999999999
Q ss_pred CCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-CccccccEEEeccccccccccc-ccccccc
Q 020916 103 GSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSIN-ETNLNRL 179 (320)
Q Consensus 103 ~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~ 179 (320)
.|+.+. ..++++.+++++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++......... .......
T Consensus 127 ~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~ 206 (360)
T PLN02679 127 ASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKL 206 (360)
T ss_pred CCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhh
Confidence 998764 357899999999999999999999999999999999998874 7999999999998653221100 0000000
Q ss_pred ccc--ccccccC--c----------CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhc---cCCC
Q 020916 180 GVS--SSSELLL--P----------NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI---SNKD 242 (320)
Q Consensus 180 ~~~--~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 242 (320)
... ....... + .....+...+...........++..+.+. ...........+...... .+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (360)
T PLN02679 207 LLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIR-GPADDEGALDAFVSIVTGPPGPNPI 285 (360)
T ss_pred hcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHH-hhccCCChHHHHHHHHhcCCCCCHH
Confidence 000 0000000 0 00011111111111111111222222111 111111111111111110 1112
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHH-----HHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVEL-----AHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
..++++++|+|+|+|++|.++|++. .+.+.+.++ ++++++++++||++++|+|+++++.|.+||+++.
T Consensus 286 ~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip--~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 286 KLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP--NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred HHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC--ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 3567899999999999999998763 234666677 8999999999999999999999999999998754
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-36 Score=239.95 Aligned_cols=262 Identities=17% Similarity=0.205 Sum_probs=174.8
Q ss_pred cCCCceEEEcCCC-----ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ce
Q 020916 19 AGVQPHAVEIEPG-----TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YS 92 (320)
Q Consensus 19 ~~~~~~~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~ 92 (320)
..+..++++++ + .+++|...|+ +++|+|||+||++++.. .|..+++.|.+. |+
T Consensus 17 ~~~~~~~~~~~-~~~~~~~~i~y~~~G~-------------------~~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~ 75 (302)
T PRK00870 17 YPFAPHYVDVD-DGDGGPLRMHYVDEGP-------------------ADGPPVLLLHGEPSWSY-LYRKMIPILAAAGHR 75 (302)
T ss_pred CCCCceeEeec-CCCCceEEEEEEecCC-------------------CCCCEEEEECCCCCchh-hHHHHHHHHHhCCCE
Confidence 35678888884 5 6899988774 35789999999999999 999999999876 99
Q ss_pred EEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 93 VYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 93 vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
|+++|+||||.|+.+. ..++.+.+++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.......
T Consensus 76 vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 155 (302)
T PRK00870 76 VIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDG 155 (302)
T ss_pred EEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccc
Confidence 9999999999998654 34789999999999999999999999999999999999999999999999999875322111
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcC-hhhHHHHhhhh-----------hc
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN-RKERAELLEGL-----------LI 238 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~ 238 (320)
........+. ...... +. ......+.... ......+....+....... ..........+ ..
T Consensus 156 ~~~~~~~~~~--~~~~~~-~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
T PRK00870 156 PMPDAFWAWR--AFSQYS-PV--LPVGRLVNGGT--VRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAAN 228 (302)
T ss_pred cchHHHhhhh--cccccC-ch--hhHHHHhhccc--cccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHH
Confidence 0000000000 000000 00 00000000000 0001111111110000000 00000000000 00
Q ss_pred cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeE---EEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVT---FQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 239 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
......+.++++|+++|+|++|+++|... +.+.+.++ +.+ +.+++++||++++++|+++++.|.+|+++.
T Consensus 229 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~--~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 229 RAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIP--GAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcc--cccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 00012467899999999999999999766 78888887 554 889999999999999999999999999764
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=234.11 Aligned_cols=260 Identities=17% Similarity=0.251 Sum_probs=170.0
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
.++.+++++ +|.+++|...| ++++|||+||++.+.. .|..+++.|.+.|+|+++|+|
T Consensus 13 ~~~~~~~~~-~~~~i~y~~~G---------------------~~~~iv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~ 69 (286)
T PRK03204 13 PFESRWFDS-SRGRIHYIDEG---------------------TGPPILLCHGNPTWSF-LYRDIIVALRDRFRCVAPDYL 69 (286)
T ss_pred cccceEEEc-CCcEEEEEECC---------------------CCCEEEEECCCCccHH-HHHHHHHHHhCCcEEEEECCC
Confidence 356678888 68899998766 4589999999998888 899999999888999999999
Q ss_pred CCCCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 100 FFGGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 100 G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|||.|+.+.. .++.+++++++.+++++++.++++++||||||.+++.++..+|++|+++|++++...............
T Consensus 70 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 149 (286)
T PRK03204 70 GFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSR 149 (286)
T ss_pred CCCCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHH
Confidence 9999986643 578899999999999999999999999999999999999999999999999876542111100000000
Q ss_pred ccccc-cccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHh---hhhhc-----cCCCCCCC--C
Q 020916 179 LGVSS-SSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELL---EGLLI-----SNKDPTVP--N 247 (320)
Q Consensus 179 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~--~ 247 (320)
..... ...... ........++.... ....++.....+. ...........+. ..+.. ......+. .
T Consensus 150 ~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (286)
T PRK03204 150 VMSSPPVQYAIL-RRNFFVERLIPAGT--EHRPSSAVMAHYR-AVQPNAAARRGVAEMPKQILAARPLLARLAREVPATL 225 (286)
T ss_pred Hhccccchhhhh-hhhHHHHHhccccc--cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhc
Confidence 00000 000000 00000000000000 0011111111111 0000000000000 00000 00000111 1
Q ss_pred CCCcEEEEecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 248 FPQRVHLLWGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
+++|+++|+|++|.++++. ..+.+.+.++ +.++++++++||++++|+|+++++.|.+|+
T Consensus 226 ~~~PtliI~G~~D~~~~~~~~~~~~~~~ip--~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 226 GTKPTLLVWGMKDVAFRPKTILPRLRATFP--DHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCCCeEEEecCCCcccCcHHHHHHHHHhcC--CCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 2899999999999988654 5788889998 899999999999999999999999999997
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=232.20 Aligned_cols=238 Identities=18% Similarity=0.184 Sum_probs=155.0
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMV 143 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~ 143 (320)
|+|||+||+++++. .|..+++.|.++|+|+++|+||||.|.... .++.+++++++. .+..++++++||||||.+
T Consensus 14 ~~ivllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~~~~~~~~lvGhS~Gg~i 87 (256)
T PRK10349 14 VHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----QQAPDKAIWLGWSLGGLV 87 (256)
T ss_pred CeEEEECCCCCChh-HHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----hcCCCCeEEEEECHHHHH
Confidence 57999999999999 999999999988999999999999998543 456666666554 356789999999999999
Q ss_pred HHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh
Q 020916 144 SFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF 223 (320)
Q Consensus 144 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (320)
++.+|.++|++|+++|++++.+.................................++.......... ......+.....
T Consensus 88 a~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 166 (256)
T PRK10349 88 ASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA-RQDARALKKTVL 166 (256)
T ss_pred HHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchH-HHHHHHHHHHhh
Confidence 9999999999999999998754322110000000000000000000000011111111110010000 011111111111
Q ss_pred cCh-h---hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH
Q 020916 224 ANR-K---ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA 299 (320)
Q Consensus 224 ~~~-~---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 299 (320)
... . ........+...+....+.++++|+++|+|++|.++|.+..+.+.+.++ ++++++++++||++++|+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~--~~~~~~i~~~gH~~~~e~p~~ 244 (256)
T PRK10349 167 ALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP--HSESYIFAKAAHAPFISHPAE 244 (256)
T ss_pred ccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC--CCeEEEeCCCCCCccccCHHH
Confidence 100 0 0011111112223345678899999999999999999999999999998 999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 020916 300 YNRCLKQFLAS 310 (320)
Q Consensus 300 ~~~~i~~fl~~ 310 (320)
|++.|.+|-++
T Consensus 245 f~~~l~~~~~~ 255 (256)
T PRK10349 245 FCHLLVALKQR 255 (256)
T ss_pred HHHHHHHHhcc
Confidence 99999998654
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=231.65 Aligned_cols=261 Identities=16% Similarity=0.180 Sum_probs=178.2
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
..+++++ +|.+++|...++ ..+|+|||+||++++.. .|..+++.|.+.|+|+++|+|||
T Consensus 7 ~~~~~~~-~~~~~~~~~~g~-------------------~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~ 65 (278)
T TIGR03056 7 CSRRVTV-GPFHWHVQDMGP-------------------TAGPLLLLLHGTGASTH-SWRDLMPPLARSFRVVAPDLPGH 65 (278)
T ss_pred ccceeeE-CCEEEEEEecCC-------------------CCCCeEEEEcCCCCCHH-HHHHHHHHHhhCcEEEeecCCCC
Confidence 4566777 799999988775 35789999999999999 99999999988899999999999
Q ss_pred CCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccc
Q 020916 102 GGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180 (320)
Q Consensus 102 G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 180 (320)
|.|+.+.. .++++.+++++.+++++++.++++|+||||||.+++.++.++|++++++|++++.................
T Consensus 66 G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~ 145 (278)
T TIGR03056 66 GFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMA 145 (278)
T ss_pred CCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhh
Confidence 99987665 68999999999999999998899999999999999999999999999999998765321111000000000
Q ss_pred ccccccccCc-------CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHH---HHhhhhhccCCCCCCCCCCC
Q 020916 181 VSSSSELLLP-------NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA---ELLEGLLISNKDPTVPNFPQ 250 (320)
Q Consensus 181 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 250 (320)
.......... ............ ........... +............ ..............++++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 221 (278)
T TIGR03056 146 RVLACNPFTPPMMSRGAADQQRVERLIRD---TGSLLDKAGMT-YYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITI 221 (278)
T ss_pred HhhhhcccchHHHHhhcccCcchhHHhhc---cccccccchhh-HHHHhhcCchhhhHHHHHhhcccccchhhhcccCCC
Confidence 0000000000 000000000000 00000111111 1111111100000 11111111111245678899
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
|+++|+|++|..+|.+..+.+.+.++ +.++++++++||+++.+.|+++++.|.+|++
T Consensus 222 P~lii~g~~D~~vp~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 222 PLHLIAGEEDKAVPPDESKRAATRVP--TATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CEEEEEeCCCcccCHHHHHHHHHhcc--CCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999888 8999999999999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=232.82 Aligned_cols=243 Identities=19% Similarity=0.281 Sum_probs=156.6
Q ss_pred CCCeEEEEcCCCCCccccHHHH---HHHhhcc-ceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ---VGALTKK-YSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~---~~~l~~~-~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
++|+|||+||++.+.. .|..+ +..|.+. |+|+++|+||||.|+..... .....+++++.++++.++.++++++|
T Consensus 29 ~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG 107 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLVG 107 (282)
T ss_pred CCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEEE
Confidence 4678999999998877 77643 4455554 99999999999999865322 12224688999999999999999999
Q ss_pred eChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHH
Q 020916 137 FSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
|||||.+++.++.++|++|+++|++++............... ...............+...................+
T Consensus 108 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (282)
T TIGR03343 108 NSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEG--IKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQ 185 (282)
T ss_pred ECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHH--HHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHH
Confidence 999999999999999999999999987532111000000000 000000000001111111111111111111222111
Q ss_pred HHHHHHhcChhhHHHHhhh-----hhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 217 DFLEVMFANRKERAELLEG-----LLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
...............+... +...+....++++++|+++++|++|.+++++..+.+.+.++ ++++++++++||+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~--~~~~~~i~~agH~ 263 (282)
T TIGR03343 186 GRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP--DAQLHVFSRCGHW 263 (282)
T ss_pred hHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC--CCEEEEeCCCCcC
Confidence 1111111111111111111 00111123567899999999999999999999999999998 9999999999999
Q ss_pred cccCChHHHHHHHHHHHH
Q 020916 292 VHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~ 309 (320)
++.|+|+.+++.|.+|++
T Consensus 264 ~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 264 AQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CcccCHHHHHHHHHHHhh
Confidence 999999999999999986
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=237.09 Aligned_cols=243 Identities=24% Similarity=0.332 Sum_probs=163.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
++++|||+||++++.. .|..+++.|.++|+|+++|+||||.|+.+...++.+.+++++.++++.+..++++++|||+||
T Consensus 85 ~g~~vvliHG~~~~~~-~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg 163 (354)
T PLN02578 85 EGLPIVLIHGFGASAF-HWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGG 163 (354)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECHHH
Confidence 4678999999999988 999999999888999999999999999887778999999999999999988999999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccc-cccccccccCcCc------------------HHHHHHHHhH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL-GVSSSSELLLPNS------------------VKGLKALLSV 202 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~~~~~~~~ 202 (320)
.+++.+|.++|++|+++|++++................ ............. ..........
T Consensus 164 ~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (354)
T PLN02578 164 FTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKS 243 (354)
T ss_pred HHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999999999999999876543221110000000 0000000000000 0000000000
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhH---HHHhhhhh----ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHh
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKER---AELLEGLL----ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL 275 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 275 (320)
.........+...+.+... ....... ......+. .......++++++|+++|+|++|.+++.+..+.+.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~ 322 (354)
T PLN02578 244 VYKDKSNVDDYLVESITEP-AADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY 322 (354)
T ss_pred hcCCcccCCHHHHHHHHhc-ccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC
Confidence 0000000111111111000 0011111 11111111 11122456789999999999999999999999999999
Q ss_pred CCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 276 GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 276 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
+ +.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 323 p--~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 323 P--DTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred C--CCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 8 8899999 58999999999999999999986
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=229.19 Aligned_cols=238 Identities=18% Similarity=0.175 Sum_probs=160.8
Q ss_pred eEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCC-CcEEEEEeChhH
Q 020916 65 VVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGV-DKCVLVGFSYGG 141 (320)
Q Consensus 65 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg 141 (320)
+|||+||++.+.. .|+.+++.|.+. |+|+++|+||||.|+.+.. .++.+.+++|+.++++.++. ++++|+||||||
T Consensus 5 ~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 4999999999999 999999999655 9999999999999986543 57899999999999999987 499999999999
Q ss_pred HHHHHHHHhCccccccEEEeccccccccccccccccc-c-cccccccc----cCcCcHH--HH-HHHHhHhhhccccCCc
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR-L-GVSSSSEL----LLPNSVK--GL-KALLSVATYKKLWFPS 212 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~-~~~~~~~~----~~~~~~~--~~-~~~~~~~~~~~~~~~~ 212 (320)
.+++.++.++|++|+++|++++............... . ........ ....... .. ........+... +.
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 161 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQS--PL 161 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCC--CH
Confidence 9999999999999999999998642111100000000 0 00000000 0000000 00 001111111110 10
Q ss_pred hhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccc
Q 020916 213 CLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 292 (320)
.... ............ . .... ......+..+++|+++|+|++|.++|++..+.+.+.++ ++++++++++||++
T Consensus 162 ~~~~-~~~~~~~~~~~~-~-~~~~--~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~--~a~~~~i~~~GH~~ 234 (255)
T PLN02965 162 EDYT-LSSKLLRPAPVR-A-FQDL--DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP--PAQTYVLEDSDHSA 234 (255)
T ss_pred HHHH-HHHHhcCCCCCc-c-hhhh--hhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC--cceEEEecCCCCch
Confidence 0000 111111110000 0 0011 01122455789999999999999999999999999998 89999999999999
Q ss_pred ccCChHHHHHHHHHHHHhhh
Q 020916 293 HLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 293 ~~~~~~~~~~~i~~fl~~~~ 312 (320)
+.|+|+++++.|.+|++.+.
T Consensus 235 ~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 235 FFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred hhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999998764
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=234.48 Aligned_cols=267 Identities=17% Similarity=0.182 Sum_probs=166.9
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHH--HHHHHh--------hccceEEecCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ--FQVGAL--------TKKYSVYIPDLL 99 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~--~~~~~l--------~~~~~vi~~d~~ 99 (320)
+|.+++|...|+...++ ..+.+|+|||+||++++.. .|. .+.+.| .++|+|+++|+|
T Consensus 48 ~g~~i~y~~~G~~~~~~------------~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~ 114 (360)
T PRK06489 48 PELRLHYTTLGTPHRNA------------DGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGI 114 (360)
T ss_pred CCceEEEEecCCCCccc------------ccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCC
Confidence 67888888777410000 0011789999999999887 775 455444 555999999999
Q ss_pred CCCCCCCCCC-------CCChhHHHHHHHHHH-HHhCCCcEE-EEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 100 FFGGSITDEA-------DRSPTFQAQCLATGL-AKLGVDKCV-LVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 100 G~G~s~~~~~-------~~~~~~~~~~l~~~l-~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
|||.|+.+.. .++++++++++.+++ +++++++++ |+||||||.+|+.+|.++|++|+++|++++.......
T Consensus 115 GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~ 194 (360)
T PRK06489 115 GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG 194 (360)
T ss_pred CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH
Confidence 9999986543 378889998888854 889998885 8999999999999999999999999999875422111
Q ss_pred ccc---cc-cccccc-cccccccCcCcHHHHHHHHhH---h------hhccccCCchhHHHHHHHHh----cC-hhhHHH
Q 020916 171 INE---TN-LNRLGV-SSSSELLLPNSVKGLKALLSV---A------TYKKLWFPSCLYKDFLEVMF----AN-RKERAE 231 (320)
Q Consensus 171 ~~~---~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~ 231 (320)
... .. ...... ..................... . ..............+..... .. ......
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
T PRK06489 195 RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLY 274 (360)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHH
Confidence 000 00 000000 000000000001011111100 0 00000011111111221111 00 111111
Q ss_pred HhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHH--HHHHHHhCCCCeEEEEecCC----CcccccCChHHHHHHHH
Q 020916 232 LLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELA--HNMKEQLGADHVTFQGIKKA----GHLVHLERPCAYNRCLK 305 (320)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~ 305 (320)
........+....+.+|++|+|+|+|++|.++|++.. +.+.+.++ +.++++++++ ||.++ ++|+++++.|.
T Consensus 275 ~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip--~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~ 351 (360)
T PRK06489 275 QWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK--HGRLVLIPASPETRGHGTT-GSAKFWKAYLA 351 (360)
T ss_pred HHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc--CCeEEEECCCCCCCCcccc-cCHHHHHHHHH
Confidence 1111112233356788999999999999999998875 78899998 8999999996 99997 89999999999
Q ss_pred HHHHhhh
Q 020916 306 QFLASLH 312 (320)
Q Consensus 306 ~fl~~~~ 312 (320)
+||+++.
T Consensus 352 ~FL~~~~ 358 (360)
T PRK06489 352 EFLAQVP 358 (360)
T ss_pred HHHHhcc
Confidence 9998764
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=231.29 Aligned_cols=257 Identities=15% Similarity=0.156 Sum_probs=170.4
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE 108 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~ 108 (320)
.+|.+++|...|+ +++++|||+||++.+.. .|+.+++.|++.|+|+++|+||||.|+.+.
T Consensus 112 ~~~~~~~y~~~G~-------------------~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Via~DlpG~G~S~~p~ 171 (383)
T PLN03084 112 SDLFRWFCVESGS-------------------NNNPPVLLIHGFPSQAY-SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQ 171 (383)
T ss_pred CCceEEEEEecCC-------------------CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCc
Confidence 4788898887775 35789999999999999 999999999888999999999999998765
Q ss_pred C----CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccccccc
Q 020916 109 A----DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSS 184 (320)
Q Consensus 109 ~----~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
. .++.+.+++++.+++++++.++++|+|||+||.+++.+|.++|++|+++|+++++....................
T Consensus 172 ~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~ 251 (383)
T PLN03084 172 PGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLL 251 (383)
T ss_pred ccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHh
Confidence 3 479999999999999999999999999999999999999999999999999998743211000000000000000
Q ss_pred ccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChh---hHHHHhhhhhccC------CC--CCCCCCCCcEE
Q 020916 185 SELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK---ERAELLEGLLISN------KD--PTVPNFPQRVH 253 (320)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~--~~~~~~~~P~l 253 (320)
...+...........+.. .......++....+...+..... ....+...+.... .. .....+++|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvL 329 (383)
T PLN03084 252 GEIFSQDPLRASDKALTS--CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPIT 329 (383)
T ss_pred hhhhhcchHHHHhhhhcc--cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEE
Confidence 000000000000000000 00000111111111111110000 0000111110000 00 01135799999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|+|+.|.+++.+..+.+.+. . +.++++++++||+++.|+|+++++.|.+|+.+
T Consensus 330 iI~G~~D~~v~~~~~~~~a~~-~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 330 VCWGLRDRWLNYDGVEDFCKS-S--QHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred EEeeCCCCCcCHHHHHHHHHh-c--CCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 999999999999988888876 4 78999999999999999999999999999863
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=233.70 Aligned_cols=268 Identities=16% Similarity=0.218 Sum_probs=170.1
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH-HHHHhh----ccceEEecC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF-QVGALT----KKYSVYIPD 97 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~-~~~~l~----~~~~vi~~d 97 (320)
..++.+ +|.+|+|...+++.. +.+++|||+||++++.. .|.. +++.|. ..|+|+++|
T Consensus 178 ~~~~~~-~~~~l~~~~~gp~~~----------------~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~D 239 (481)
T PLN03087 178 TSWLSS-SNESLFVHVQQPKDN----------------KAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVD 239 (481)
T ss_pred eeeEee-CCeEEEEEEecCCCC----------------CCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEEC
Confidence 344555 578899988776321 24689999999999998 8985 446665 359999999
Q ss_pred CCCCCCCCCCC-CCCChhHHHHHHH-HHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc-
Q 020916 98 LLFFGGSITDE-ADRSPTFQAQCLA-TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET- 174 (320)
Q Consensus 98 ~~G~G~s~~~~-~~~~~~~~~~~l~-~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~- 174 (320)
+||||.|+.+. ..++++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++..........
T Consensus 240 l~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~ 319 (481)
T PLN03087 240 LLGFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQAT 319 (481)
T ss_pred CCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHH
Confidence 99999998764 4488999999994 89999999999999999999999999999999999999999765432211100
Q ss_pred --ccccccccc-cccccCcCcHHHHHHHHhHhhh----cc---------ccCCchhHHHHHHHHhcC-hhhHHHHhhhhh
Q 020916 175 --NLNRLGVSS-SSELLLPNSVKGLKALLSVATY----KK---------LWFPSCLYKDFLEVMFAN-RKERAELLEGLL 237 (320)
Q Consensus 175 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (320)
......... +...........+......... .. ...+........+..... .......+..+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i 399 (481)
T PLN03087 320 QYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNII 399 (481)
T ss_pred HHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHH
Confidence 000000000 0000000000000000000000 00 000000000000000000 000000000000
Q ss_pred cc-------CCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc-CChHHHHHHHHHHHH
Q 020916 238 IS-------NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLA 309 (320)
Q Consensus 238 ~~-------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 309 (320)
.. .......++++|+|+|+|++|.++|++..+.+.+.++ ++++++++++||+++. ++|+++++.|.+|.+
T Consensus 400 ~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP--~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 400 CGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP--RARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred hchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC--CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 00 0001123689999999999999999999999999998 8999999999999885 999999999999986
Q ss_pred h
Q 020916 310 S 310 (320)
Q Consensus 310 ~ 310 (320)
.
T Consensus 478 ~ 478 (481)
T PLN03087 478 R 478 (481)
T ss_pred c
Confidence 5
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=236.22 Aligned_cols=260 Identities=17% Similarity=0.174 Sum_probs=168.5
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
.+...+||.+|+|...+++. ...+++|||+||++++....|..+++.|++. |+|+++|+||||
T Consensus 64 ~~~~~~~g~~l~~~~~~p~~----------------~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G 127 (349)
T PLN02385 64 SYEVNSRGVEIFSKSWLPEN----------------SRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFG 127 (349)
T ss_pred eeEEcCCCCEEEEEEEecCC----------------CCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCC
Confidence 33444577777776655421 1357899999999988662468899999876 999999999999
Q ss_pred CCCCCCCC-CChhHHHHHHHHHHHHhCCC------cEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc-c
Q 020916 103 GSITDEAD-RSPTFQAQCLATGLAKLGVD------KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE-T 174 (320)
Q Consensus 103 ~s~~~~~~-~~~~~~~~~l~~~l~~~~~~------~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~ 174 (320)
.|+.+... .+++.+++|+.++++.+... +++|+||||||.+++.++.++|++++++|+++|.......... .
T Consensus 128 ~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~ 207 (349)
T PLN02385 128 LSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP 207 (349)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCch
Confidence 99865432 57888999999999887532 7999999999999999999999999999999986543221100 0
Q ss_pred cccccc--ccc-ccc-ccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHH---HhcCh---hhHHHHhhhhhccCCCCC
Q 020916 175 NLNRLG--VSS-SSE-LLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEV---MFANR---KERAELLEGLLISNKDPT 244 (320)
Q Consensus 175 ~~~~~~--~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~ 244 (320)
...... ... ... ...+.. .+.. ..+........... ..... ......+... .+....
T Consensus 208 ~~~~~~~~~~~~~p~~~~~~~~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~ 274 (349)
T PLN02385 208 LVLQILILLANLLPKAKLVPQK--DLAE---------LAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTT--QEIEMQ 274 (349)
T ss_pred HHHHHHHHHHHHCCCceecCCC--cccc---------ccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHH--HHHHHh
Confidence 000000 000 000 000000 0000 00000000000000 00000 0000111100 111235
Q ss_pred CCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH----HHHHHHHHHHhhh
Q 020916 245 VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA----YNRCLKQFLASLH 312 (320)
Q Consensus 245 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~ 312 (320)
+.++++|+|+|+|++|.++|++..+.+.+.++..++++++++++||+++.++|++ +.+.|.+||++..
T Consensus 275 l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 275 LEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred cccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 6788999999999999999999999999988534789999999999999998876 8888999998764
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=221.66 Aligned_cols=237 Identities=19% Similarity=0.224 Sum_probs=162.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
+++|+|||+||++++.. .|..++..|.++|+|+++|+||||.|..+ ..++++++++|+.+++++++.++++|+|||||
T Consensus 14 ~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~G 91 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD-NLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIEKATFIGHSMG 91 (255)
T ss_pred CCCCCEEEECCCCCchh-HHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCceEEEEECHH
Confidence 57899999999999999 99999999988899999999999999864 45789999999999999999999999999999
Q ss_pred HHHHHHHHHhCccccccEEEeccccccccccc-ccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHH
Q 020916 141 GMVSFKVAELYPNLVQAMVVSGSILAMTDSIN-ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL 219 (320)
Q Consensus 141 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
|.+++.+|.++|++|+++|++++.+....... ........ ..... ...........+.. .........+.
T Consensus 92 g~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~ 162 (255)
T PRK10673 92 GKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAIN--AVSEA-GATTRQQAAAIMRQ------HLNEEGVIQFL 162 (255)
T ss_pred HHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHH--Hhhhc-ccccHHHHHHHHHH------hcCCHHHHHHH
Confidence 99999999999999999999986432211000 00000000 00000 00000000000000 00111111111
Q ss_pred HHHhcChh---hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 220 EVMFANRK---ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 220 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
........ .................++.+++|+|+|+|++|..++.+..+.+.+.++ ++++++++++||++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~ 240 (255)
T PRK10673 163 LKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP--QARAHVIAGAGHWVHAEK 240 (255)
T ss_pred HhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC--CcEEEEeCCCCCeeeccC
Confidence 11100000 0000000111111123566789999999999999999999999999998 899999999999999999
Q ss_pred hHHHHHHHHHHHHh
Q 020916 297 PCAYNRCLKQFLAS 310 (320)
Q Consensus 297 ~~~~~~~i~~fl~~ 310 (320)
|+++++.|.+||++
T Consensus 241 p~~~~~~l~~fl~~ 254 (255)
T PRK10673 241 PDAVLRAIRRYLND 254 (255)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999975
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=221.97 Aligned_cols=241 Identities=20% Similarity=0.275 Sum_probs=164.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
.++|+|||+||+++++. .|..+++.|.++|+|+++|+||||.|..+. ..++.+++++++.+++++++.++++++||||
T Consensus 11 ~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~ 89 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS-YWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHAL 89 (257)
T ss_pred CCCCEEEEEcCCCcchh-HHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence 36789999999999999 999999999888999999999999998654 4578999999999999999999999999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc---hhHH
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS---CLYK 216 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 216 (320)
||.+++.++.++|++|+++|++++................. ....... ..+........+...+... ....
T Consensus 90 Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (257)
T TIGR03611 90 GGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIA---LLQHAGP---EAYVHAQALFLYPADWISENAARLAA 163 (257)
T ss_pred hHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHH---HHhccCc---chhhhhhhhhhccccHhhccchhhhh
Confidence 99999999999999999999998754321111000000000 0000000 0000000000000000000 0000
Q ss_pred HHHHHHh--cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 217 DFLEVMF--ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 217 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
....... ............+...+....+.++++|+++++|++|.++|++..+.+.+.++ +.+++.++++||++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~ 241 (257)
T TIGR03611 164 DEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP--NAQLKLLPYGGHASNV 241 (257)
T ss_pred hhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC--CceEEEECCCCCCccc
Confidence 0000000 00001111112222223335677889999999999999999999999999988 8899999999999999
Q ss_pred CChHHHHHHHHHHHHh
Q 020916 295 ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~ 310 (320)
++|+++++.|.+||++
T Consensus 242 ~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 242 TDPETFNRALLDFLKT 257 (257)
T ss_pred cCHHHHHHHHHHHhcC
Confidence 9999999999999863
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=216.86 Aligned_cols=255 Identities=15% Similarity=0.132 Sum_probs=164.0
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++..+||.+|.|..+.+. +..++.|+++||+++++. .|..+++.|.+. |+|+++|+||||.
T Consensus 4 ~~~~~~g~~l~~~~~~~~-----------------~~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~ 65 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI-----------------TYPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGR 65 (276)
T ss_pred eeecCCCCEEEEEeccCC-----------------CCCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCC
Confidence 445558999999766541 135677788899999999 999999999887 9999999999999
Q ss_pred CCCCCC-CCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 104 SITDEA-DRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 104 s~~~~~-~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|+.... ..++..+++|+.+.++.+ ...+++|+||||||.+|+.+|.++|++++++|+++|............+..
T Consensus 66 S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~ 145 (276)
T PHA02857 66 SNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAA 145 (276)
T ss_pred CCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHH
Confidence 975432 235566677777777654 345899999999999999999999999999999998653211000000000
Q ss_pred c----cc-cccccccCcCcH-HHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcE
Q 020916 179 L----GV-SSSSELLLPNSV-KGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRV 252 (320)
Q Consensus 179 ~----~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 252 (320)
. .. ........+... ....... ................+.... .. . .......+.++++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~-~-~~~~~~~l~~i~~Pv 212 (276)
T PHA02857 146 KLMGIFYPNKIVGKLCPESVSRDMDEVY-KYQYDPLVNHEKIKAGFASQV----------LK-A-TNKVRKIIPKIKTPI 212 (276)
T ss_pred HHHHHhCCCCccCCCCHhhccCCHHHHH-HHhcCCCccCCCccHHHHHHH----------HH-H-HHHHHHhcccCCCCE
Confidence 0 00 000000000000 0000000 000000000000000000000 00 0 001123567899999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh---HHHHHHHHHHHHhh
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP---CAYNRCLKQFLASL 311 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 311 (320)
|+|+|++|.++|++.++.+.+.+. .++++++++++||.++.|.+ +++.+.+.+||++.
T Consensus 213 liv~G~~D~i~~~~~~~~l~~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 213 LILQGTNNEISDVSGAYYFMQHAN-CNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EEEecCCCCcCChHHHHHHHHHcc-CCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 999999999999999999999875 36899999999999998865 57999999999874
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=217.12 Aligned_cols=236 Identities=21% Similarity=0.281 Sum_probs=164.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
++|+|||+||++.+.. .|..+++.|.+.|+|+++|+||||.|..+...++.+++++++.++++.++.++++++|||+||
T Consensus 12 ~~~~li~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg 90 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-MWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSLGG 90 (251)
T ss_pred CCCeEEEEcCcccchh-hHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchH
Confidence 6789999999999999 999999999877999999999999998766678999999999999999998899999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHH-HHHHhHhhhccccC--CchhHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGL-KALLSVATYKKLWF--PSCLYKDF 218 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~ 218 (320)
.+++.+|.++|++++++|++++......... ...... . ......... ....... ...... .......+
T Consensus 91 ~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~--~~~~~~--~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 161 (251)
T TIGR02427 91 LIAQGLAARRPDRVRALVLSNTAAKIGTPES--WNARIA--A----VRAEGLAALADAVLERW-FTPGFREAHPARLDLY 161 (251)
T ss_pred HHHHHHHHHCHHHhHHHhhccCccccCchhh--HHHHHh--h----hhhccHHHHHHHHHHHH-cccccccCChHHHHHH
Confidence 9999999999999999999987643221100 000000 0 000000000 0001000 011000 11111111
Q ss_pred HHHHhc-ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 219 LEVMFA-NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 219 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
...... ...........+...+....+.++++|+++++|++|..+|.+..+.+.+.++ +.++++++++||++++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p 239 (251)
T TIGR02427 162 RNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP--GARFAEIRGAGHIPCVEQP 239 (251)
T ss_pred HHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC--CceEEEECCCCCcccccCh
Confidence 111111 1111111111111122224567789999999999999999999999999888 8899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 020916 298 CAYNRCLKQFLA 309 (320)
Q Consensus 298 ~~~~~~i~~fl~ 309 (320)
+++.+.|.+|++
T Consensus 240 ~~~~~~i~~fl~ 251 (251)
T TIGR02427 240 EAFNAALRDFLR 251 (251)
T ss_pred HHHHHHHHHHhC
Confidence 999999999973
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=215.55 Aligned_cols=235 Identities=21% Similarity=0.248 Sum_probs=151.4
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGM 142 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ 142 (320)
+|+|||+||++++.. .|..+++.|. +|+|+++|+||||.|..+.. .+++.+++++.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 578999999999999 9999999994 59999999999999986553 58899999999999999999999999999999
Q ss_pred HHHHHHHhCccc-cccEEEecccccccccccccccccccccccccccCcCc-HHHHHHHHhHhhhccccCCchhHHHHHH
Q 020916 143 VSFKVAELYPNL-VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNS-VKGLKALLSVATYKKLWFPSCLYKDFLE 220 (320)
Q Consensus 143 ~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (320)
+|+.+|.++|+. |++++++++.......... .........+...+.... ...+..++...... .........+..
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 155 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEER-QARWQNDRQWAQRFRQEPLEQVLADWYQQPVFA--SLNAEQRQQLVA 155 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHH-HHHHhhhHHHHHHhccCcHHHHHHHHHhcchhh--ccCccHHHHHHH
Confidence 999999999664 9999998876532221100 000000000000000000 01111111000000 011111222211
Q ss_pred HHhc-ChhhHHHHhhhhh---ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 221 VMFA-NRKERAELLEGLL---ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 221 ~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.... ............. ..+....+.++++|+++|+|++|+.+. .+.+. . ++++++++++||+++.|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~--~~~~~~i~~~gH~~~~e~ 227 (242)
T PRK11126 156 KRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-L--ALPLHVIPNAGHNAHREN 227 (242)
T ss_pred hcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-h--cCeEEEeCCCCCchhhhC
Confidence 1111 1111111111110 111224567899999999999998542 23333 3 689999999999999999
Q ss_pred hHHHHHHHHHHHHhh
Q 020916 297 PCAYNRCLKQFLASL 311 (320)
Q Consensus 297 ~~~~~~~i~~fl~~~ 311 (320)
|+++++.|.+|++.+
T Consensus 228 p~~~~~~i~~fl~~~ 242 (242)
T PRK11126 228 PAAFAASLAQILRLI 242 (242)
T ss_pred hHHHHHHHHHHHhhC
Confidence 999999999999753
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=221.17 Aligned_cols=263 Identities=14% Similarity=0.130 Sum_probs=169.8
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
..++...||.+|+|+...+... .+.+++|||+||++.+....|..++..|.+. |+|+++|+|||
T Consensus 34 ~~~~~~~dg~~l~~~~~~~~~~---------------~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGh 98 (330)
T PLN02298 34 KSFFTSPRGLSLFTRSWLPSSS---------------SPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGH 98 (330)
T ss_pred cceEEcCCCCEEEEEEEecCCC---------------CCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCC
Confidence 4456667999999977654211 0256789999999866432577788889876 99999999999
Q ss_pred CCCCCCCC-CCChhHHHHHHHHHHHHhCC------CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 102 GGSITDEA-DRSPTFQAQCLATGLAKLGV------DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 102 G~s~~~~~-~~~~~~~~~~l~~~l~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
|.|..... ..+.+.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++...........
T Consensus 99 G~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (330)
T PLN02298 99 GRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP 178 (330)
T ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc
Confidence 99975433 35788889999999998753 369999999999999999999999999999999865432211000
Q ss_pred c-cccccccccccccCcCcHHHHHHHHhHhhhc--cccCCc----hhHHHHHHH---HhcChh---hHHHHhhhhhccCC
Q 020916 175 N-LNRLGVSSSSELLLPNSVKGLKALLSVATYK--KLWFPS----CLYKDFLEV---MFANRK---ERAELLEGLLISNK 241 (320)
Q Consensus 175 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~ 241 (320)
. .... ......+....... ...... .....+... .+.... ....+.... ...
T Consensus 179 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 243 (330)
T PLN02298 179 WPIPQI-------------LTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVT--DYL 243 (330)
T ss_pred hHHHHH-------------HHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHH--HHH
Confidence 0 0000 00000000000000 000000 000000000 000000 000111100 011
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH----HHHHHHHHHHHhhhhcc
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC----AYNRCLKQFLASLHADE 315 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~~~~~ 315 (320)
...+.++++|+|+|+|++|.++|++..+.+.+.++..++++++++++||.++.++|+ ++.+.|.+||.+...++
T Consensus 244 ~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 244 GKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred HHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 235678899999999999999999999999888754478999999999999988775 57778889998876443
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=216.75 Aligned_cols=265 Identities=13% Similarity=0.062 Sum_probs=169.5
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDL 98 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~ 98 (320)
+.+...+.. ||.+++|...+++ ..+++||++||++++.. .|..++..|.+. |+|+++|+
T Consensus 30 ~~~~~~~~~-~g~~l~~~~~~~~------------------~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~ 89 (330)
T PRK10749 30 REEAEFTGV-DDIPIRFVRFRAP------------------HHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDH 89 (330)
T ss_pred ccceEEEcC-CCCEEEEEEccCC------------------CCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcC
Confidence 334444444 8999999887641 25679999999999888 899999888766 99999999
Q ss_pred CCCCCCCCCCC------CCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 99 LFFGGSITDEA------DRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 99 ~G~G~s~~~~~------~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
||||.|..+.. ..+++++++|+.++++.+ +..+++++||||||.+++.++.++|++++++|+++|.....
T Consensus 90 ~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~ 169 (330)
T PRK10749 90 RGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIV 169 (330)
T ss_pred CCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccC
Confidence 99999975432 147889999999999886 56789999999999999999999999999999998865332
Q ss_pred cccccccccc----cc-ccccccc--cCcCcHHHHHHHHhHhhhccccC--CchhHHHHHHHHhcChhh-----HHHHhh
Q 020916 169 DSINETNLNR----LG-VSSSSEL--LLPNSVKGLKALLSVATYKKLWF--PSCLYKDFLEVMFANRKE-----RAELLE 234 (320)
Q Consensus 169 ~~~~~~~~~~----~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~ 234 (320)
.......... .. ....... ...... ........+. ..+....+.+.+...... ...+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (330)
T PRK10749 170 LPLPSWMARRILNWAEGHPRIRDGYAIGTGRW-------RPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVR 242 (330)
T ss_pred CCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCC-------CCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHH
Confidence 1111000000 00 0000000 000000 0000000000 011111111111111000 000000
Q ss_pred -hhhc-cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC-----CCCeEEEEecCCCcccccCCh---HHHHHHH
Q 020916 235 -GLLI-SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG-----ADHVTFQGIKKAGHLVHLERP---CAYNRCL 304 (320)
Q Consensus 235 -~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~~---~~~~~~i 304 (320)
.+.. ......+.++++|+|+|+|++|.+++++.++.+.+.++ ..++++++++|+||.++.|.+ +.+.+.|
T Consensus 243 ~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i 322 (330)
T PRK10749 243 ESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAI 322 (330)
T ss_pred HHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHH
Confidence 0000 01113467789999999999999999999888888763 135689999999999998875 6788899
Q ss_pred HHHHHhh
Q 020916 305 KQFLASL 311 (320)
Q Consensus 305 ~~fl~~~ 311 (320)
.+||++.
T Consensus 323 ~~fl~~~ 329 (330)
T PRK10749 323 VDFFNRH 329 (330)
T ss_pred HHHHhhc
Confidence 9999764
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=216.00 Aligned_cols=237 Identities=18% Similarity=0.204 Sum_probs=153.9
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGM 142 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ 142 (320)
.|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|... ...+++++++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 488999999999999 99999999988899999999999998754 3456777766665543 36899999999999
Q ss_pred HHHHHHHhCccccccEEEeccccccccccccc-ccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHH
Q 020916 143 VSFKVAELYPNLVQAMVVSGSILAMTDSINET-NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEV 221 (320)
Q Consensus 143 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
+++.++.++|++++++|++++.+......... .........+..............+......... ........+...
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 156 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTP-TARQDARALKQT 156 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC-ccchHHHHHHHH
Confidence 99999999999999999998765432111000 0000000000000000000011111111100000 011111111111
Q ss_pred HhcC----hhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 222 MFAN----RKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 222 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
.... .......+..+...+....+.++++|+++++|++|.++|.+..+.+.+.++ ++++++++++||++++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p 234 (245)
T TIGR01738 157 LLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP--HSELYIFAKAAHAPFLSHA 234 (245)
T ss_pred hhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC--CCeEEEeCCCCCCccccCH
Confidence 1100 011111222222222234567899999999999999999999999999988 8999999999999999999
Q ss_pred HHHHHHHHHHH
Q 020916 298 CAYNRCLKQFL 308 (320)
Q Consensus 298 ~~~~~~i~~fl 308 (320)
+++++.|.+|+
T Consensus 235 ~~~~~~i~~fi 245 (245)
T TIGR01738 235 EAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHhhC
Confidence 99999999985
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=224.05 Aligned_cols=265 Identities=17% Similarity=0.178 Sum_probs=165.9
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc-----------cHHHHHH---H
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV-----------TWQFQVG---A 86 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~-----------~~~~~~~---~ 86 (320)
+.....++ +|.+++|...|+ .++++||+||+.++... .|..+++ .
T Consensus 36 ~~~~~~~~-~~~~l~y~~~G~--------------------~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~ 94 (343)
T PRK08775 36 LSMRHAGL-EDLRLRYELIGP--------------------AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRA 94 (343)
T ss_pred eeecCCCC-CCceEEEEEecc--------------------CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCc
Confidence 34444455 678888877763 34457777766665541 4788886 5
Q ss_pred hh-ccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCccccccEEEeccc
Q 020916 87 LT-KKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKC-VLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 87 l~-~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
|. ++|+||++|+||||.|. ...++..++++|+.++++++++++. +|+||||||++|+.+|.++|++|+++|++++.
T Consensus 95 L~~~~~~Vi~~Dl~G~g~s~--~~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 95 LDPARFRLLAFDFIGADGSL--DVPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred cCccccEEEEEeCCCCCCCC--CCCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 74 56999999999999884 3356788899999999999999774 79999999999999999999999999999986
Q ss_pred ccccccccccccccccc-ccccccc--CcCcHHHHHHH----------HhHhhhcccc-CC---chhHHHHHHH----Hh
Q 020916 165 LAMTDSINETNLNRLGV-SSSSELL--LPNSVKGLKAL----------LSVATYKKLW-FP---SCLYKDFLEV----MF 223 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~----------~~~~~~~~~~-~~---~~~~~~~~~~----~~ 223 (320)
........ ........ ....... ........... +......... .. ......++.. ..
T Consensus 173 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 251 (343)
T PRK08775 173 HRAHPYAA-AWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYV 251 (343)
T ss_pred ccCCHHHH-HHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHH
Confidence 53221100 00000000 0000000 00000000000 0000000000 00 0111111111 10
Q ss_pred --cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC-CCcccccCChHHH
Q 020916 224 --ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK-AGHLVHLERPCAY 300 (320)
Q Consensus 224 --~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~ 300 (320)
........+..... .....+.++++|+|+|+|++|.++|++..+.+.+.++ .+.+++++++ +||++++|+|++|
T Consensus 252 ~~~~~~~~~~~~~~~~--~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~~ 328 (343)
T PRK08775 252 ARTPVNAYLRLSESID--LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDRI 328 (343)
T ss_pred HhcChhHHHHHHHHHh--hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHHH
Confidence 00011111111111 1123467899999999999999999999999998883 2889999984 9999999999999
Q ss_pred HHHHHHHHHhhh
Q 020916 301 NRCLKQFLASLH 312 (320)
Q Consensus 301 ~~~i~~fl~~~~ 312 (320)
++.|.+||++..
T Consensus 329 ~~~l~~FL~~~~ 340 (343)
T PRK08775 329 DAILTTALRSTG 340 (343)
T ss_pred HHHHHHHHHhcc
Confidence 999999998764
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=219.67 Aligned_cols=281 Identities=30% Similarity=0.378 Sum_probs=180.4
Q ss_pred hcCCCceEEEcCCC--ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceE
Q 020916 18 MAGVQPHAVEIEPG--TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSV 93 (320)
Q Consensus 18 ~~~~~~~~~~~~~g--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v 93 (320)
...+....+++..| ....-|...... +....+..+++||++|||+++.. .|+.++..|.+. +.|
T Consensus 22 ~~~~~~~~i~~~~g~~~~~~~w~~~~~~-----------~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v 89 (326)
T KOG1454|consen 22 FVTLRSTSIEIPWGPLTIRSKWIPNLDK-----------YGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRV 89 (326)
T ss_pred eccccceEEEcccCCceeEEEEecccee-----------ccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEE
Confidence 34556677777766 333334433200 00011247899999999999999 999999999999 999
Q ss_pred EecCCCCCCCCC-CCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEE---Eeccccccc
Q 020916 94 YIPDLLFFGGSI-TDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMV---VSGSILAMT 168 (320)
Q Consensus 94 i~~d~~G~G~s~-~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv---l~~~~~~~~ 168 (320)
+++|++|+|.++ .+. ..++..++++.+..+......++++++|||+||.+|+.+|+.+|+.|+++| ++++.....
T Consensus 90 ~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 90 LAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYST 169 (326)
T ss_pred EEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccC
Confidence 999999999544 333 338888999999999999888899999999999999999999999999999 555554433
Q ss_pred ccccccccccccc-cccccccCcCcHHHHHHHHhHhh----hccccCCchhHHHHHHHHhc------ChhhHHHHhhhhh
Q 020916 169 DSINETNLNRLGV-SSSSELLLPNSVKGLKALLSVAT----YKKLWFPSCLYKDFLEVMFA------NRKERAELLEGLL 237 (320)
Q Consensus 169 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 237 (320)
+............ ........+.........+.... ...........+........ ....+..++....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (326)
T KOG1454|consen 170 PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELL 249 (326)
T ss_pred CcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEecc
Confidence 3221111111110 00000001000000011000000 00001111111111111111 1111122222222
Q ss_pred c--cCCCCCCCCCC-CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 238 I--SNKDPTVPNFP-QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 238 ~--~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
. ......+.++. ||+++++|++|+++|.+.+..+.+.++ ++++++++++||.+++|.|+++++.|..|+.+..
T Consensus 250 ~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p--n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 250 GFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP--NAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred CccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC--CceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 1 12223456666 999999999999999999999999998 9999999999999999999999999999998753
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=222.25 Aligned_cols=264 Identities=14% Similarity=0.165 Sum_probs=162.5
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH---HHhhc-cceEEecCCCCCCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV---GALTK-KYSVYIPDLLFFGGSI 105 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~---~~l~~-~~~vi~~d~~G~G~s~ 105 (320)
+|.+++|...|+... +..|+||++||++++.. .|..++ +.|.. +|+||++|+||||.|+
T Consensus 24 ~~~~l~y~~~G~~~~----------------~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~ 86 (339)
T PRK07581 24 PDARLAYKTYGTLNA----------------AKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSS 86 (339)
T ss_pred CCceEEEEecCccCC----------------CCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCC
Confidence 688899988875110 23466777777777766 666554 46764 4999999999999998
Q ss_pred CCCC---CCChhH-----HHHHHHH----HHHHhCCCc-EEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc
Q 020916 106 TDEA---DRSPTF-----QAQCLAT----GLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172 (320)
Q Consensus 106 ~~~~---~~~~~~-----~~~~l~~----~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 172 (320)
.+.. .++.+. +++++.+ +++++++++ ++||||||||++|+.+|.++|++|+++|++++.........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~ 166 (339)
T PRK07581 87 SPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNF 166 (339)
T ss_pred CCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHH
Confidence 6542 233332 4556554 678899999 47999999999999999999999999999987654221100
Q ss_pred c---cccccccc-cccccccC----cCcHHHHHHHHhH-----hhhccc-c--CC----chhHHHHHHHHhc--ChhhHH
Q 020916 173 E---TNLNRLGV-SSSSELLL----PNSVKGLKALLSV-----ATYKKL-W--FP----SCLYKDFLEVMFA--NRKERA 230 (320)
Q Consensus 173 ~---~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~-~--~~----~~~~~~~~~~~~~--~~~~~~ 230 (320)
. .....+.. ..+..... ............. ...... . .. +.....+...... ......
T Consensus 167 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (339)
T PRK07581 167 VFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLL 246 (339)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHH
Confidence 0 00000000 00000000 0011111111100 000000 0 00 1111112222111 111111
Q ss_pred HHhhhhhc----------cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC-CCcccccCChHH
Q 020916 231 ELLEGLLI----------SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK-AGHLVHLERPCA 299 (320)
Q Consensus 231 ~~~~~~~~----------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~ 299 (320)
..+..+.. .+....+.++++|+|+|+|++|..+|++..+.+.+.++ +++++++++ +||+++.+++++
T Consensus 247 ~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip--~a~l~~i~~~~GH~~~~~~~~~ 324 (339)
T PRK07581 247 AMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP--NAELRPIESIWGHLAGFGQNPA 324 (339)
T ss_pred HHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCeEEEeCCCCCccccccCcHH
Confidence 11111110 11224567899999999999999999999999999998 899999998 999999999999
Q ss_pred HHHHHHHHHHhhh
Q 020916 300 YNRCLKQFLASLH 312 (320)
Q Consensus 300 ~~~~i~~fl~~~~ 312 (320)
++..|.+||+++-
T Consensus 325 ~~~~~~~~~~~~~ 337 (339)
T PRK07581 325 DIAFIDAALKELL 337 (339)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=204.75 Aligned_cols=249 Identities=19% Similarity=0.236 Sum_probs=160.5
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEAD----RSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
..++++|+|||+|++.. .|-.-.+.|++.++|+++|++|+|.|+.|.-. .....+++.+.++....++++.+|+|
T Consensus 88 ~~~~plVliHGyGAg~g-~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvG 166 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLG-LFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVG 166 (365)
T ss_pred cCCCcEEEEeccchhHH-HHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEee
Confidence 47889999999999999 99999999999999999999999999988733 23346788888898999999999999
Q ss_pred eChhHHHHHHHHHhCccccccEEEeccccccccc-cccccc---cccc--ccccccccCc--------CcHHHHHHHHhH
Q 020916 137 FSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS-INETNL---NRLG--VSSSSELLLP--------NSVKGLKALLSV 202 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~---~~~~--~~~~~~~~~~--------~~~~~~~~~~~~ 202 (320)
||+||+++..+|.++|++|+.|||++|....... ...... ..+. .......+.+ .....+...+..
T Consensus 167 HSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~ 246 (365)
T KOG4409|consen 167 HSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRP 246 (365)
T ss_pred ccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhH
Confidence 9999999999999999999999999998765432 110000 0000 0000000000 000011111111
Q ss_pred hhhcc--ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC------CCCCCC--CCcEEEEecCCCCCCCHHHHHHHH
Q 020916 203 ATYKK--LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD------PTVPNF--PQRVHLLWGEDDQIFNVELAHNMK 272 (320)
Q Consensus 203 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~ 272 (320)
..+.. ....++.+-+|.-............+..+...... ..+..+ +||+++|+|++|.+ +......+.
T Consensus 247 d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~ 325 (365)
T KOG4409|consen 247 DRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVT 325 (365)
T ss_pred HHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHH
Confidence 11111 01112222222222222222222222222111111 222333 49999999999965 455555555
Q ss_pred HHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 273 EQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 273 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+.+....++.++++++||.+..++|+.|++.|.++++..
T Consensus 326 ~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 326 KSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 544435799999999999999999999999999998763
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-31 Score=207.41 Aligned_cols=239 Identities=17% Similarity=0.157 Sum_probs=155.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhC-CCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLG-VDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~-~~~~~lvGh 137 (320)
+++|+|||+||++.+.. .|..++..|.+. |+|+++|+||||.|.... ...+++++++++.++++.+. .++++|+||
T Consensus 16 ~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGh 94 (273)
T PLN02211 16 RQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGH 94 (273)
T ss_pred CCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 37889999999999999 999999999875 999999999999875433 34789999999999999985 579999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEeccccccccccccc-cccccc-ccccccc-----cC-c----CcHHHHHHHHhHhhh
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET-NLNRLG-VSSSSEL-----LL-P----NSVKGLKALLSVATY 205 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-----~~-~----~~~~~~~~~~~~~~~ 205 (320)
||||.++..++..+|++|+++|++++........... ...... ....... .. . ........+.....+
T Consensus 95 S~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
T PLN02211 95 SAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILY 174 (273)
T ss_pred CchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHh
Confidence 9999999999999999999999998754311100000 000000 0000000 00 0 000000000000000
Q ss_pred ccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC-CCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEE
Q 020916 206 KKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF-PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQG 284 (320)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
.. .+.+. ..+......... ...+...........+ ++|+++|.|++|..+|++..+.+.+.++ ..+++.
T Consensus 175 ~~--~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~~~~~ 244 (273)
T PLN02211 175 QM--SPQED-STLAAMLLRPGP-----ILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP--PSQVYE 244 (273)
T ss_pred cC--CCHHH-HHHHHHhcCCcC-----ccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC--ccEEEE
Confidence 00 01111 111111110000 0011111111123344 7899999999999999999999999988 678999
Q ss_pred ecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 285 IKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 285 ~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++ +||.+++++|+++++.|.++....
T Consensus 245 l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 245 LE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred EC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 97 799999999999999999887653
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-31 Score=218.21 Aligned_cols=266 Identities=17% Similarity=0.177 Sum_probs=167.4
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcccc-------------HHHHH----HHhhccce
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVT-------------WQFQV----GALTKKYS 92 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~-------------~~~~~----~~l~~~~~ 92 (320)
+|.+++|...|.+. .+.+|+|||+||++++.. . |..++ ..+.++|+
T Consensus 31 ~~~~~~y~~~G~~~----------------~~~~p~vvl~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~ 93 (379)
T PRK00175 31 PPVELAYETYGTLN----------------ADRSNAVLICHALTGDHH-VAGPHSPDDPKPGWWDNMVGPGKPIDTDRYF 93 (379)
T ss_pred CCceEEEEeccccC----------------CCCCCEEEEeCCcCCchh-hcccccccCCCCcchhhccCCCCccCccceE
Confidence 56677888877421 124789999999999887 4 66665 23355699
Q ss_pred EEecCCCCC-CCCCCCC--------------CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCccccc
Q 020916 93 VYIPDLLFF-GGSITDE--------------ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQ 156 (320)
Q Consensus 93 vi~~d~~G~-G~s~~~~--------------~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~ 156 (320)
||++|++|+ |.|+.+. ..++++++++++.++++++++++ ++++||||||.+++.+|.++|++|+
T Consensus 94 vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~ 173 (379)
T PRK00175 94 VICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVR 173 (379)
T ss_pred EEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhh
Confidence 999999983 5443221 14789999999999999999999 5899999999999999999999999
Q ss_pred cEEEeccccccccccccc---ccccccc-cccc--cc----cCcCcHHHH---------------HHHHhHhhhccc---
Q 020916 157 AMVVSGSILAMTDSINET---NLNRLGV-SSSS--EL----LLPNSVKGL---------------KALLSVATYKKL--- 208 (320)
Q Consensus 157 ~lvl~~~~~~~~~~~~~~---~~~~~~~-~~~~--~~----~~~~~~~~~---------------~~~~~~~~~~~~--- 208 (320)
++|++++........... ....... ..+. .. ..+...... ...+........
T Consensus 174 ~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~ 253 (379)
T PRK00175 174 SALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPF 253 (379)
T ss_pred EEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcccccccccc
Confidence 999999876433211000 0000000 0000 00 000000000 000000000000
Q ss_pred cC-CchhHHHHHHH----Hh--cChhhHHHHhhhhhccC--------CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHH
Q 020916 209 WF-PSCLYKDFLEV----MF--ANRKERAELLEGLLISN--------KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKE 273 (320)
Q Consensus 209 ~~-~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 273 (320)
+. .......+... .. ............+...+ ....+.+|++|+|+|+|++|.++|++..+.+.+
T Consensus 254 ~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~ 333 (379)
T PRK00175 254 GFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVD 333 (379)
T ss_pred CCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHH
Confidence 00 00111111110 11 11111111111111111 224567899999999999999999999999999
Q ss_pred HhCCCCe----EEEEec-CCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 274 QLGADHV----TFQGIK-KAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 274 ~~~~~~~----~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
.++ +. ++++++ ++||++++++|+++++.|.+||+++..+
T Consensus 334 ~i~--~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 334 ALL--AAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred HHH--hcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhhc
Confidence 998 54 778775 9999999999999999999999987654
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.3e-31 Score=217.80 Aligned_cols=253 Identities=24% Similarity=0.341 Sum_probs=169.4
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG 102 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G 102 (320)
...+.+ ++.+++|...++ +++++|||+||++++.. .|..+.+.|.+.|+|+++|+||||
T Consensus 111 ~~~~~~-~~~~i~~~~~g~-------------------~~~~~vl~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~G 169 (371)
T PRK14875 111 PRKARI-GGRTVRYLRLGE-------------------GDGTPVVLIHGFGGDLN-NWLFNHAALAAGRPVIALDLPGHG 169 (371)
T ss_pred CCcceE-cCcEEEEecccC-------------------CCCCeEEEECCCCCccc-hHHHHHHHHhcCCEEEEEcCCCCC
Confidence 344555 477788776664 36789999999999999 999999999888999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccccc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVS 182 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
.|.......+++++++++.++++.++..+++++|||+||.+++.+|..+|+++.++|++++........ ......+.
T Consensus 170 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~-~~~~~~~~-- 246 (371)
T PRK14875 170 ASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN-GDYIDGFV-- 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc-hhHHHHhh--
Confidence 997665668899999999999999998899999999999999999999999999999998764322110 00000000
Q ss_pred ccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh-cChhh-HHHHhhhhhc-----cCCCCCCCCCCCcEEEE
Q 020916 183 SSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF-ANRKE-RAELLEGLLI-----SNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~P~l~i 255 (320)
.......+...+....................... ..... ...+...... .+....+.+++||++++
T Consensus 247 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 320 (371)
T PRK14875 247 ------AAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVI 320 (371)
T ss_pred ------cccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEE
Confidence 00001111111111111111111111111111100 00000 0000000000 11112456789999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|++|.++|++..+.+ . .+.++.+++++||++++++|+++++.|.+|+++
T Consensus 321 ~g~~D~~vp~~~~~~l----~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 321 WGEQDRIIPAAHAQGL----P-DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EECCCCccCHHHHhhc----c-CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 9999999998765443 2 368899999999999999999999999999975
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-32 Score=209.92 Aligned_cols=221 Identities=31% Similarity=0.445 Sum_probs=152.6
Q ss_pred EEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020916 66 VVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMV 143 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~ 143 (320)
|||+||++++.. .|..+++.|+++|+|+++|+||+|.|..+. ..++.+++++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHH-HHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999999 999999999766999999999999998766 35788999999999999999999999999999999
Q ss_pred HHHHHHhCccccccEEEeccccccccccc----ccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHH
Q 020916 144 SFKVAELYPNLVQAMVVSGSILAMTDSIN----ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL 219 (320)
Q Consensus 144 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
++.++.++|++|+++|++++......... ...+... ................. .+..........
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 148 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRL---------LAWRSRSLRRLASRFFY--RWFDGDEPEDLI 148 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH--HHHTHHHHHHHH
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhh---------hhccccccccccccccc--cccccccccccc
Confidence 99999999999999999998874332110 0000000 00000000000000000 000111111111
Q ss_pred HHHhcChhhHHHHhhh-hhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH
Q 020916 220 EVMFANRKERAELLEG-LLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298 (320)
Q Consensus 220 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 298 (320)
... .......... ....+....++.+++|+++++|++|.+++.+..+.+.+.++ ++++++++++||++++++|+
T Consensus 149 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~ 223 (228)
T PF12697_consen 149 RSS---RRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP--NAELVVIPGAGHFLFLEQPD 223 (228)
T ss_dssp HHH---HHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST--TEEEEEETTSSSTHHHHSHH
T ss_pred ccc---ccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC--CCEEEEECCCCCccHHHCHH
Confidence 110 0000000000 00111113456678999999999999999999999999988 99999999999999999999
Q ss_pred HHHHH
Q 020916 299 AYNRC 303 (320)
Q Consensus 299 ~~~~~ 303 (320)
+++++
T Consensus 224 ~~~~a 228 (228)
T PF12697_consen 224 EVAEA 228 (228)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 98864
|
... |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-31 Score=217.28 Aligned_cols=262 Identities=16% Similarity=0.182 Sum_probs=164.3
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc----------cHHHHH---HHh-hccceEEe
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV----------TWQFQV---GAL-TKKYSVYI 95 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~----------~~~~~~---~~l-~~~~~vi~ 95 (320)
+|.+|+|...|++.. ..+++|||+||+++++.. .|..++ ..| .++|+|++
T Consensus 14 ~~~~~~y~~~g~~~~----------------~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~ 77 (351)
T TIGR01392 14 SDVRVAYETYGTLNA----------------ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVC 77 (351)
T ss_pred CCceEEEEeccccCC----------------CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEE
Confidence 688899988875211 246899999999997641 377776 244 45599999
Q ss_pred cCCCC--CCCCCCCC------------CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCccccccEEE
Q 020916 96 PDLLF--FGGSITDE------------ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQAMVV 160 (320)
Q Consensus 96 ~d~~G--~G~s~~~~------------~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 160 (320)
+|+|| ||.|.... ..++++++++++.+++++++.++ ++|+||||||.+++.+|.++|++|+++|+
T Consensus 78 ~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl 157 (351)
T TIGR01392 78 SNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVV 157 (351)
T ss_pred ecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEE
Confidence 99999 56554311 13788999999999999999998 99999999999999999999999999999
Q ss_pred ecccccccccccccc---cccccc-ccccc--ccC---cCcHHHHHHHHhHhh----------hccccCCc---------
Q 020916 161 SGSILAMTDSINETN---LNRLGV-SSSSE--LLL---PNSVKGLKALLSVAT----------YKKLWFPS--------- 212 (320)
Q Consensus 161 ~~~~~~~~~~~~~~~---~~~~~~-~~~~~--~~~---~~~~~~~~~~~~~~~----------~~~~~~~~--------- 212 (320)
+++............ ...... ..... ... +.........+.... +.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 237 (351)
T TIGR01392 158 LATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDT 237 (351)
T ss_pred EccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCc
Confidence 998764332110000 000000 00000 000 000000000000000 00000000
Q ss_pred -hhHHHHHH----HHhc--ChhhHHHHhhhhhccC-------CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCC
Q 020916 213 -CLYKDFLE----VMFA--NRKERAELLEGLLISN-------KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD 278 (320)
Q Consensus 213 -~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 278 (320)
...+.+.. .... +..........+...+ ....+.+|++|+|+|+|++|.++|++..+.+.+.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~-- 315 (351)
T TIGR01392 238 RFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALP-- 315 (351)
T ss_pred cchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHh--
Confidence 00111111 1111 1111111111222111 124677899999999999999999999999999998
Q ss_pred CeEEE-----EecCCCcccccCChHHHHHHHHHHHH
Q 020916 279 HVTFQ-----GIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 279 ~~~~~-----~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
+.+++ +++++||++++++|+++++.|.+||+
T Consensus 316 ~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 316 AAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred hcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 55544 45789999999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-30 Score=213.39 Aligned_cols=261 Identities=16% Similarity=0.210 Sum_probs=161.9
Q ss_pred ceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCC-C----hhHHHHHHHHHHH
Q 020916 51 KIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADR-S----PTFQAQCLATGLA 125 (320)
Q Consensus 51 ~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~-~----~~~~~~~l~~~l~ 125 (320)
+.++..+.+++++|+|||+||++++.. .|...+..|.++|+|+++|+||||.|+.+.... + .+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQG-FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchh-HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 444555555667899999999999888 888888999888999999999999998654321 1 1235677788888
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc-cccccccc---ccc-----ccccCcC-----
Q 020916 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE-TNLNRLGV---SSS-----SELLLPN----- 191 (320)
Q Consensus 126 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~---~~~-----~~~~~~~----- 191 (320)
.++.++++|+||||||.+++.+|.++|++|+++|++++.......... ........ ... ...+.+.
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 251 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRG 251 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHh
Confidence 888899999999999999999999999999999999876543221110 00000000 000 0000000
Q ss_pred ----cHHHHHHHHhHhhhc---cccCCchh---HHHHHHHHhcChhhH---HHHhhh---hhccCCCCCCCCCCCcEEEE
Q 020916 192 ----SVKGLKALLSVATYK---KLWFPSCL---YKDFLEVMFANRKER---AELLEG---LLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 192 ----~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~P~l~i 255 (320)
............... ......+. ..+++.......... ...... +...+....+.++++|+++|
T Consensus 252 ~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI 331 (402)
T PLN02894 252 LGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFI 331 (402)
T ss_pred ccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEE
Confidence 000000111000000 00011111 111111111111010 011110 11122234577889999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
+|++|.+.+ .....+.+... ..+++++++++||+++.|+|++|++.|.+|++.....
T Consensus 332 ~G~~D~i~~-~~~~~~~~~~~-~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 332 YGRHDWMNY-EGAVEARKRMK-VPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EeCCCCCCc-HHHHHHHHHcC-CCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 999998765 44555555553 3688999999999999999999999999999876543
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=206.81 Aligned_cols=259 Identities=18% Similarity=0.159 Sum_probs=162.7
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
.+.+ +|.++.|...+. .+.+++|||+||++++....|..+...|.+. |+|+++|+||||.
T Consensus 6 ~~~~-~~~~~~~~~~~~------------------~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~ 66 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGG------------------EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGY 66 (288)
T ss_pred eecC-CCCeEEEEeccC------------------CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCC
Confidence 3455 577788876653 1346899999998766652556666777764 9999999999999
Q ss_pred CCCCCC---CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc--ccccc
Q 020916 104 SITDEA---DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE--TNLNR 178 (320)
Q Consensus 104 s~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~ 178 (320)
|..+.. .++.+.+++++.+++++++.++++++|||+||.+++.++.++|++++++|++++.......... .....
T Consensus 67 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 146 (288)
T TIGR01250 67 SDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKE 146 (288)
T ss_pred CCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhh
Confidence 986542 2788999999999999999889999999999999999999999999999998875432111000 00000
Q ss_pred ccc---ccccccc--CcCcHHHHHHHHhHhh----hccccCCchhHHHHHHHHhcChhhHHHHh---------hhhhccC
Q 020916 179 LGV---SSSSELL--LPNSVKGLKALLSVAT----YKKLWFPSCLYKDFLEVMFANRKERAELL---------EGLLISN 240 (320)
Q Consensus 179 ~~~---~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 240 (320)
... ....... ................ ..... ........... ......... ..+...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (288)
T TIGR01250 147 LPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRK-WPEALKHLKSG---MNTNVYNIMQGPNEFTITGNLKDWD 222 (288)
T ss_pred cChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhccccc-chHHHHHHhhc---cCHHHHhcccCCccccccccccccC
Confidence 000 0000000 0000000000000000 00000 00000000000 000000000 0000111
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 241 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
....+.++++|+++++|++|.+ +++..+.+.+.++ +.++++++++||+++.++|+++++.|.+||+
T Consensus 223 ~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 223 ITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIA--GSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhcc--CCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 2235677899999999999985 6678888888888 8899999999999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=200.66 Aligned_cols=242 Identities=26% Similarity=0.368 Sum_probs=155.7
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC--CCCChhHHHHH-HHHHHHHhCCCcEEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE--ADRSPTFQAQC-LATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~-l~~~l~~~~~~~~~lvGhS~ 139 (320)
+|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|..+. ...++++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 478999999999999 999999999966999999999999997654 34678888888 77888888888999999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHH-hHhhhcc-ccCCchhHHH
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALL-SVATYKK-LWFPSCLYKD 217 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 217 (320)
||.+++.+|.++|++|++++++++............. ..........+.......+...+ ....+.. ...+......
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAAR-RQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhh-hhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 9999999999999999999999876543221110000 00000000000000000000000 0000000 0011111111
Q ss_pred HHHHHh-cChhhHHHHhhhhhc---cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 218 FLEVMF-ANRKERAELLEGLLI---SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 218 ~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
+..... .........+..... ......+..+++|+++++|++|..++ +..+.+.+..+ +.++++++++||+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~gH~~~ 235 (251)
T TIGR03695 159 LRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP--NLTLVIIANAGHNIH 235 (251)
T ss_pred HHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC--CCcEEEEcCCCCCcC
Confidence 111111 111111111111100 11113456789999999999998764 55667777777 899999999999999
Q ss_pred cCChHHHHHHHHHHHH
Q 020916 294 LERPCAYNRCLKQFLA 309 (320)
Q Consensus 294 ~~~~~~~~~~i~~fl~ 309 (320)
+++|+++++.|.+|++
T Consensus 236 ~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 236 LENPEAFAKILLAFLE 251 (251)
T ss_pred ccChHHHHHHHHHHhC
Confidence 9999999999999983
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=240.72 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=163.2
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC--------CCCChhHHHHHHHHHHHHhCCCcEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE--------ADRSPTFQAQCLATGLAKLGVDKCV 133 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~--------~~~~~~~~~~~l~~~l~~~~~~~~~ 133 (320)
++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|.... ..++++.+++++.+++++++.++++
T Consensus 1370 ~~~~vVllHG~~~s~~-~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5689999999999999 999999999888999999999999997542 2467889999999999999999999
Q ss_pred EEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc---ccC
Q 020916 134 LVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK---LWF 210 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 210 (320)
|+||||||.+++.++.++|++|+++|++++.+......... ............+.... ...+........ ...
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~-~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~ 1524 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARK-IRSAKDDSRARMLIDHG---LEIFLENWYSGELWKSLR 1524 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHH-HHhhhhhHHHHHHHhhh---HHHHHHHhccHHHhhhhc
Confidence 99999999999999999999999999998754322111000 00000000000000000 011111110000 000
Q ss_pred CchhHHHHHHHHh--cChhhHHHHhhhhhc---cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCC-------
Q 020916 211 PSCLYKDFLEVMF--ANRKERAELLEGLLI---SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD------- 278 (320)
Q Consensus 211 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~------- 278 (320)
............. .........+..+.. .+....+.++++|+|+|+|++|..++ +..+.+.+.++..
T Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~ 1603 (1655)
T PLN02980 1525 NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDK 1603 (1655)
T ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccc
Confidence 0111111111111 111111112222111 11224578899999999999999875 6667777777611
Q ss_pred ---CeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 279 ---HVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 279 ---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
.+++++++++||++++|+|+++++.|.+||++....
T Consensus 1604 ~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1604 GKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred cccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcccc
Confidence 258999999999999999999999999999987654
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-29 Score=203.85 Aligned_cols=239 Identities=15% Similarity=0.173 Sum_probs=153.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCC----CcEEEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGV----DKCVLV 135 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~----~~~~lv 135 (320)
.+++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.... ..+.+.+++|+.++++.+.. .+++++
T Consensus 135 ~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv 213 (395)
T PLN02652 135 MRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLF 213 (395)
T ss_pred CceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 5679999999999888 899999999876 9999999999999986543 24777888999999988752 379999
Q ss_pred EeChhHHHHHHHHHhCc---cccccEEEecccccccccccc-cccccccccccccccCcCcHHHHHHHHhHhhhccccCC
Q 020916 136 GFSYGGMVSFKVAELYP---NLVQAMVVSGSILAMTDSINE-TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFP 211 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (320)
||||||.+++.++. +| ++++++|+.+|.......... ...................... .......
T Consensus 214 GhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~---------~~~~s~~ 283 (395)
T PLN02652 214 GHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKR---------GIPVSRD 283 (395)
T ss_pred EECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcccc---------cCCcCCC
Confidence 99999999998765 55 379999999886532211000 0000000000000000000000 0000000
Q ss_pred chhHHHHHHH-Hh-c-Ch--hhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEec
Q 020916 212 SCLYKDFLEV-MF-A-NR--KERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIK 286 (320)
Q Consensus 212 ~~~~~~~~~~-~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
.......... .. . .. .......... ......+.++++|+|+++|++|.++|++.++.+++.+...+.++++++
T Consensus 284 ~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~--~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ 361 (395)
T PLN02652 284 PAALLAKYSDPLVYTGPIRVRTGHEILRIS--SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYD 361 (395)
T ss_pred HHHHHHHhcCCCcccCCchHHHHHHHHHHH--HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEEC
Confidence 0000000000 00 0 00 0000000000 011235678899999999999999999999999998764468899999
Q ss_pred CCCcccccC-ChHHHHHHHHHHHHhhhh
Q 020916 287 KAGHLVHLE-RPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 287 ~~gH~~~~~-~~~~~~~~i~~fl~~~~~ 313 (320)
+++|.++.+ +++++.+.|.+||++...
T Consensus 362 ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 362 GFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 999999776 789999999999987653
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-29 Score=202.64 Aligned_cols=124 Identities=18% Similarity=0.228 Sum_probs=103.3
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc-cceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK-KYSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~-~~~vi~~d~~G 100 (320)
...++...||.+|+|...++ +++++|||+||++++.. .+ .+...+.. .|+|+++|+||
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~-------------------~~~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G 63 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGN-------------------PDGKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRG 63 (306)
T ss_pred cCCeEEcCCCcEEEEEECcC-------------------CCCCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCC
Confidence 45688888899999988774 35678999999887765 43 34445544 49999999999
Q ss_pred CCCCCCCCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 101 FGGSITDEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 101 ~G~s~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
||.|..+.. ..+.+++++++..++++++.++++++||||||.+++.++.++|++|+++|++++...
T Consensus 64 ~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 64 CGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 999986542 356778899999999999999999999999999999999999999999999987653
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-29 Score=195.77 Aligned_cols=265 Identities=21% Similarity=0.184 Sum_probs=174.3
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
......||..+.|+...... +...+||++||++.+.. .|..++..|... |.|+++|+||||
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~-----------------~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG 73 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPE-----------------PPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHG 73 (298)
T ss_pred ceeecCCCceEEEEeecCCC-----------------CCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCC
Confidence 33444489999998776521 23489999999999999 999999999998 999999999999
Q ss_pred CCC-CCCC-CCChhHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 103 GSI-TDEA-DRSPTFQAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 103 ~s~-~~~~-~~~~~~~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
.|. .... ..+++++..|+.++++... ..+++++||||||.+++.++.+++.+|+++|+.+|.............
T Consensus 74 ~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~ 153 (298)
T COG2267 74 RSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLIL 153 (298)
T ss_pred CCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHH
Confidence 997 3332 3558889999999998875 358999999999999999999999999999999998866530000000
Q ss_pred ccc---cccccccccCcCcHHHHHHHHhHhhhccccC--CchhHHHHHHHHh-cCh-hhHHHHhhhhhccC--CCCCCCC
Q 020916 177 NRL---GVSSSSELLLPNSVKGLKALLSVATYKKLWF--PSCLYKDFLEVMF-ANR-KERAELLEGLLISN--KDPTVPN 247 (320)
Q Consensus 177 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~--~~~~~~~ 247 (320)
... ....+...+.... . . .......+. .....+.+.+... ... .....+...+.... .......
T Consensus 154 ~~~~~~~~~~~~p~~~~~~-~-~-----~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~ 226 (298)
T COG2267 154 ARLALKLLGRIRPKLPVDS-N-L-----LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPA 226 (298)
T ss_pred HHHhcccccccccccccCc-c-c-----ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhcccc
Confidence 000 0000000000000 0 0 000000000 0111111111110 000 00111111111111 2234667
Q ss_pred CCCcEEEEecCCCCCCC-HHHHHHHHHHhCCCCeEEEEecCCCcccccC-Ch--HHHHHHHHHHHHhhhh
Q 020916 248 FPQRVHLLWGEDDQIFN-VELAHNMKEQLGADHVTFQGIKKAGHLVHLE-RP--CAYNRCLKQFLASLHA 313 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~--~~~~~~i~~fl~~~~~ 313 (320)
+++|+|+++|++|.+++ .+...++.+.....++++++++|+.|.++.| +. +++.+.+.+|+.+...
T Consensus 227 ~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 227 IALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 89999999999999999 6888888888775678999999999999977 44 7889999999987653
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=208.24 Aligned_cols=273 Identities=12% Similarity=0.096 Sum_probs=166.8
Q ss_pred CCceEEEcCCCceeeE-eccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNF-WVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~d 97 (320)
.+.+.+.++||..+.+ |....... ...++|+||++||+++++...| ..++..+.+. |+|+++|
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~--------------~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d 136 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRA--------------LPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFN 136 (388)
T ss_pred eeEEEEECCCCCEEEEEecCccccc--------------CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4566788889999887 43211000 1136789999999987765234 4566555444 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCccc--cccEEEecccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQAQCLATGLAKLGV----DKCVLVGFSYGGMVSFKVAELYPNL--VQAMVVSGSILAMTDSI 171 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~~ 171 (320)
+||||.|............++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++.......
T Consensus 137 ~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~ 216 (388)
T PLN02511 137 SRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD 216 (388)
T ss_pred cCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH
Confidence 99999997654433345567888888888764 5799999999999999999999987 88888887655321000
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHh--hhc--cccCCc------hhHHHHHHHHhc---ChhhHHHHhhhhhc
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVA--TYK--KLWFPS------CLYKDFLEVMFA---NRKERAELLEGLLI 238 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~ 238 (320)
...... ............+.+..... ... ..+... ....++.+.+.. .......++ ..
T Consensus 217 -~~~~~~-----~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy---~~ 287 (388)
T PLN02511 217 -EDFHKG-----FNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYY---SN 287 (388)
T ss_pred -HHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHH---HH
Confidence 000000 00000000000111111100 000 000000 111111111110 001111111 11
Q ss_pred cCCCCCCCCCCCcEEEEecCCCCCCCHHHH-HHHHHHhCCCCeEEEEecCCCcccccCChHH------HHHHHHHHHHhh
Q 020916 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELA-HNMKEQLGADHVTFQGIKKAGHLVHLERPCA------YNRCLKQFLASL 311 (320)
Q Consensus 239 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~ 311 (320)
.+....+.++++|+|+|+|++|+++|.+.. ....+..+ ++++++++++||..++|+|+. +.+.+.+||+.+
T Consensus 288 ~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p--~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 288 SSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANP--NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred cCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCC--CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 233457888999999999999999997754 44566666 999999999999999999875 589999999887
Q ss_pred hhcccCC
Q 020916 312 HADEQFT 318 (320)
Q Consensus 312 ~~~~~~~ 318 (320)
.....++
T Consensus 366 ~~~~~~~ 372 (388)
T PLN02511 366 EEGKSST 372 (388)
T ss_pred HHhcccc
Confidence 6554443
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-30 Score=191.18 Aligned_cols=259 Identities=16% Similarity=0.129 Sum_probs=173.7
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
..+++..+|..+....+.+.. +.+.+..|+++||++......|..++..|+.. |.|+++|++||
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~---------------~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~Gh 93 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLS---------------GTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGH 93 (313)
T ss_pred eeeEEcCCCCEeEEEecccCC---------------CCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCC
Confidence 344555567777664443311 11356789999999988743888899999998 99999999999
Q ss_pred CCCCCCCCC-CChhHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 102 GGSITDEAD-RSPTFQAQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 102 G~s~~~~~~-~~~~~~~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
|.|+..... .+++..++|+....+... ..+..++||||||.+++.++.++|+..+|+|+++|.+...+...+.
T Consensus 94 G~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~ 173 (313)
T KOG1455|consen 94 GRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPH 173 (313)
T ss_pred CcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCC
Confidence 999977654 678888999988888642 2379999999999999999999999999999999998765554322
Q ss_pred ccccccccccccccCcCcHHHHHHHHhHhhhcc------ccCCchhHHHHHHH-Hh--cCh---hhHHHHhhhhhccCCC
Q 020916 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKK------LWFPSCLYKDFLEV-MF--ANR---KERAELLEGLLISNKD 242 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~--~~~---~~~~~~~~~~~~~~~~ 242 (320)
......... +..++......+ ....+...+..... .+ ... ....++++.- .+..
T Consensus 174 p~v~~~l~~------------l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~--~~le 239 (313)
T KOG1455|consen 174 PPVISILTL------------LSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVT--ADLE 239 (313)
T ss_pred cHHHHHHHH------------HHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHH--HHHH
Confidence 211110000 000000000000 00000011111100 00 000 0111111110 1223
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc----CChHHHHHHHHHHHHh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL----ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~ 310 (320)
..+.++++|.+++||++|.++.++.++.+++..++.+.++..|||.-|.++. ++.+.+...|.+||++
T Consensus 240 ~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 240 KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 5678999999999999999999999999999998889999999999999885 3446788888899875
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=177.24 Aligned_cols=251 Identities=14% Similarity=0.093 Sum_probs=175.1
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPD 97 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d 97 (320)
......+.+ +|++|+|..+|. ....|++++|..++....|.+++..|.+. +.|+++|
T Consensus 20 ~~te~kv~v-ng~ql~y~~~G~--------------------G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawD 78 (277)
T KOG2984|consen 20 DYTESKVHV-NGTQLGYCKYGH--------------------GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWD 78 (277)
T ss_pred hhhhheeee-cCceeeeeecCC--------------------CCceeEecccccccccccCCHHHHhcCCCCceEEEEEC
Confidence 344556777 799999999995 55679999999887766888888777665 9999999
Q ss_pred CCCCCCCCCCCCCCChhHH---HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQ---AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
.||+|.|.+|...+..+.. +++...+++.++.+++.++|+|-||..|+..|+++++.|.++|+.++...........
T Consensus 79 PpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma 158 (277)
T KOG2984|consen 79 PPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMA 158 (277)
T ss_pred CCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHH
Confidence 9999999988877665554 5566777888999999999999999999999999999999999998876443221111
Q ss_pred ccccccccccccccCcCcHHHHHHHHhHhhhcc-ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEE
Q 020916 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKK-LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVH 253 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 253 (320)
.... .....+........ ..+..+.+......+. ....++...-...-.+..+++++||+|
T Consensus 159 ~kgi---------------Rdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wv---D~v~qf~~~~dG~fCr~~lp~vkcPtl 220 (277)
T KOG2984|consen 159 FKGI---------------RDVNKWSARGRQPYEDHYGPETFRTQWAAWV---DVVDQFHSFCDGRFCRLVLPQVKCPTL 220 (277)
T ss_pred Hhch---------------HHHhhhhhhhcchHHHhcCHHHHHHHHHHHH---HHHHHHhhcCCCchHhhhcccccCCee
Confidence 0000 00000000000000 0001111111111110 000111110001112357899999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
|++|+.|++++...+-.+....+ .+++.+.|.++|.+++..+++|+..+.+||++.
T Consensus 221 i~hG~kDp~~~~~hv~fi~~~~~--~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 221 IMHGGKDPFCGDPHVCFIPVLKS--LAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred EeeCCcCCCCCCCCccchhhhcc--cceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 99999999999888888888877 899999999999999999999999999999863
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=172.51 Aligned_cols=224 Identities=19% Similarity=0.245 Sum_probs=162.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGh 137 (320)
.+..||||||+.++.+ ..+.+.+.|.++ |.|.+|.+||||.....--..++++|.+++.+..+++ +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 4489999999999999 999999999999 9999999999999875545677888877777766655 5778999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
||||.+++.+|..+| ++++|.++++........ ..+.+...+...... .....+..++
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~-------------------iie~~l~y~~~~kk~-e~k~~e~~~~ 150 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRI-------------------IIEGLLEYFRNAKKY-EGKDQEQIDK 150 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchh-------------------hhHHHHHHHHHhhhc-cCCCHHHHHH
Confidence 999999999999998 899999998874322110 011111111111110 1112223333
Q ss_pred HHHHHhc-ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC-
Q 020916 218 FLEVMFA-NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE- 295 (320)
Q Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~- 295 (320)
.+..+.. .......+..-+ .+....+..|..|++++.|.+|+.+|.+.+..+.+...+...++..++++||.+..+
T Consensus 151 e~~~~~~~~~~~~~~~~~~i--~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~ 228 (243)
T COG1647 151 EMKSYKDTPMTTTAQLKKLI--KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDK 228 (243)
T ss_pred HHHHhhcchHHHHHHHHHHH--HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecch
Confidence 3333321 111111111111 122346778899999999999999999999999999887789999999999998876
Q ss_pred ChHHHHHHHHHHHHh
Q 020916 296 RPCAYNRCLKQFLAS 310 (320)
Q Consensus 296 ~~~~~~~~i~~fl~~ 310 (320)
..+.+.+.|..||+.
T Consensus 229 Erd~v~e~V~~FL~~ 243 (243)
T COG1647 229 ERDQVEEDVITFLEK 243 (243)
T ss_pred hHHHHHHHHHHHhhC
Confidence 578999999999973
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=214.75 Aligned_cols=260 Identities=16% Similarity=0.206 Sum_probs=161.4
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS 104 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s 104 (320)
.+.. ||.+|+|+..++ +++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|
T Consensus 7 ~~~~-~g~~l~~~~~g~-------------------~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Vi~~D~~G~G~S 65 (582)
T PRK05855 7 VVSS-DGVRLAVYEWGD-------------------PDRPTVVLVHGYPDNHE-VWDGVAPLLADRFRVVAYDVRGAGRS 65 (582)
T ss_pred EEee-CCEEEEEEEcCC-------------------CCCCeEEEEcCCCchHH-HHHHHHHHhhcceEEEEecCCCCCCC
Confidence 3444 799999988875 35789999999999999 99999999977799999999999999
Q ss_pred CCCC--CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhC--ccccccEEEecccccccccccccccccc
Q 020916 105 ITDE--ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILAMTDSINETNLNRL 179 (320)
Q Consensus 105 ~~~~--~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 179 (320)
..+. ..++.+++++|+..++++++..+ ++|+||||||.+++.++.+. ++++..++.++++..... ......
T Consensus 66 ~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~- 141 (582)
T PRK05855 66 SAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHV---GFWLRS- 141 (582)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHH---HHHHhh-
Confidence 8654 35789999999999999998765 99999999999998887662 344555554443221000 000000
Q ss_pred cccccccccCcCcHHHHHHHHhHhhhccccCCch--------hHHHHHHHHh-------------cC-hhhHHHHhhhhh
Q 020916 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSC--------LYKDFLEVMF-------------AN-RKERAELLEGLL 237 (320)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-------------~~-~~~~~~~~~~~~ 237 (320)
...............................+.. ......+... .. ......+.....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (582)
T PRK05855 142 GLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMI 221 (582)
T ss_pred cccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhh
Confidence 0000000000000000000000000000000000 0000000000 00 000000001111
Q ss_pred ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 238 ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 238 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
..........+++|+++|+|++|.+++++..+.+.+.++ +.++++++ +||+++.++|+++.+.|.+|+.+..
T Consensus 222 ~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 222 RSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVP--RLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred hhhccCccCCccCceEEEEeCCCcccCHHHhccccccCC--cceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 111112355689999999999999999999988888887 77888886 6999999999999999999998754
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=191.62 Aligned_cols=265 Identities=14% Similarity=0.116 Sum_probs=169.1
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc------------ccHHHHH---HHhhcc-ceE
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI------------VTWQFQV---GALTKK-YSV 93 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~------------~~~~~~~---~~l~~~-~~v 93 (320)
+..+|+|..+|.... ...++||++|++++++. ..|..++ ..|... |-|
T Consensus 39 ~~~~~~Y~t~G~ln~----------------~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfv 102 (389)
T PRK06765 39 PDVQMGYETYGTLNR----------------AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFV 102 (389)
T ss_pred CCceEEEEeccccCC----------------CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEE
Confidence 356788988886322 25689999999988642 1366665 346555 999
Q ss_pred EecCCCCCCCCCCC---------------------CCCCChhHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhC
Q 020916 94 YIPDLLFFGGSITD---------------------EADRSPTFQAQCLATGLAKLGVDKCV-LVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 94 i~~d~~G~G~s~~~---------------------~~~~~~~~~~~~l~~~l~~~~~~~~~-lvGhS~Gg~~a~~~a~~~ 151 (320)
|++|..|-|.|..| .+.+++.++++++.+++++++++++. ++||||||++++.+|.++
T Consensus 103 i~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~ 182 (389)
T PRK06765 103 ISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHY 182 (389)
T ss_pred EEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHC
Confidence 99999987653211 12368999999999999999999986 999999999999999999
Q ss_pred ccccccEEEecccccccccccccccc----cc-ccccccccc-----Cc-CcHHHHHHHH----------hHhhhccc--
Q 020916 152 PNLVQAMVVSGSILAMTDSINETNLN----RL-GVSSSSELL-----LP-NSVKGLKALL----------SVATYKKL-- 208 (320)
Q Consensus 152 p~~v~~lvl~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~-----~~-~~~~~~~~~~----------~~~~~~~~-- 208 (320)
|++|+++|++++.............. .+ ....+.... .+ ......+... .....+..
T Consensus 183 P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~ 262 (389)
T PRK06765 183 PHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASI 262 (389)
T ss_pred hHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccc
Confidence 99999999998876543321000000 00 000000000 00 0011111111 10000000
Q ss_pred c-------CCchhHHHHHHHHh------cChhhHHHHhhhhhccC-------CCCCCCCCCCcEEEEecCCCCCCCHHHH
Q 020916 209 W-------FPSCLYKDFLEVMF------ANRKERAELLEGLLISN-------KDPTVPNFPQRVHLLWGEDDQIFNVELA 268 (320)
Q Consensus 209 ~-------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 268 (320)
. ......+.++.... .+......+...+...+ ....+.++++|+|+|+|++|.++|++..
T Consensus 263 ~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~ 342 (389)
T PRK06765 263 EVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYN 342 (389)
T ss_pred cccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHH
Confidence 0 00012223333221 11122222223332222 2245668999999999999999999999
Q ss_pred HHHHHHhCC--CCeEEEEecC-CCcccccCChHHHHHHHHHHHHh
Q 020916 269 HNMKEQLGA--DHVTFQGIKK-AGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 269 ~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+.+.+.++. .+++++++++ +||+.++++|+++++.|.+||++
T Consensus 343 ~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 343 YKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999998861 2689999985 89999999999999999999975
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-26 Score=174.92 Aligned_cols=240 Identities=21% Similarity=0.259 Sum_probs=166.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC----CCcEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG----VDKCVL 134 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~l 134 (320)
...|+++++||+.++.. .|+.+...|+.. ..|+++|.|.||.|+... ..+...+++|+..+|+..+ ..++++
T Consensus 50 ~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCcccc-ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 47899999999999999 999999999988 899999999999998544 4568899999999999884 568999
Q ss_pred EEeChhH-HHHHHHHHhCccccccEEEeccccccccccccccccccc---ccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 135 VGFSYGG-MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG---VSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 135 vGhS~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+|||||| .+++..+...|+.+..+|+++-.+...+.........+. .........+........+.. ..
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~-------~~ 200 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE-------VG 200 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHH-------Hh
Confidence 9999999 777777888999999999998776422221111111110 000000000111111111111 01
Q ss_pred CchhHHHHHHHHhc------------ChhhHHHHhhhhhccCCCCCC--CCCCCcEEEEecCCCCCCCHHHHHHHHHHhC
Q 020916 211 PSCLYKDFLEVMFA------------NRKERAELLEGLLISNKDPTV--PNFPQRVHLLWGEDDQIFNVELAHNMKEQLG 276 (320)
Q Consensus 211 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 276 (320)
.+.....++...+. +......++..+........+ .....||+++.|.++..++.+....+.+.++
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp 280 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP 280 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc
Confidence 11222222222221 122223333332111222222 6678999999999999999999999999999
Q ss_pred CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 277 ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 277 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+++++.++++||+.+.|+|+++.+.|.+|+...
T Consensus 281 --~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 281 --NVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred --chheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 899999999999999999999999999998764
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=177.41 Aligned_cols=244 Identities=13% Similarity=0.172 Sum_probs=155.1
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
.+.+.++||.+|+.|...+.... ..+.++||++||++.... .+..+++.|.+. |.|+.+|.+|+
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~--------------~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~ 75 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENS--------------PKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHH 75 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccC--------------CCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCC
Confidence 35678889999999988763211 135689999999999877 799999999998 99999999988
Q ss_pred -CCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc
Q 020916 102 -GGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177 (320)
Q Consensus 102 -G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 177 (320)
|.|+......+......|+.++++.+ +..++.|+||||||.+|+..|... .++++|+.+|..............
T Consensus 76 ~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~ 153 (307)
T PRK13604 76 VGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGY 153 (307)
T ss_pred CCCCCCccccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhc
Confidence 99976554555555567777666665 456899999999999997777643 388899888876433111100000
Q ss_pred cccccccccccCcCcHHHHHHHHhHhhhccccCCchh-HHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEe
Q 020916 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL-YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (320)
... .+.....+.... +. .... ...++........ . . .......+..+++|+|+||
T Consensus 154 ~~~--~~p~~~lp~~~d----------~~----g~~l~~~~f~~~~~~~~~-----~-~--~~s~i~~~~~l~~PvLiIH 209 (307)
T PRK13604 154 DYL--SLPIDELPEDLD----------FE----GHNLGSEVFVTDCFKHGW-----D-T--LDSTINKMKGLDIPFIAFT 209 (307)
T ss_pred ccc--cCcccccccccc----------cc----cccccHHHHHHHHHhcCc-----c-c--cccHHHHHhhcCCCEEEEE
Confidence 000 000000000000 00 0000 0111111100000 0 0 0001123556789999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
|++|.++|.+.++.+.+.+...++++++++|++|.+.. ++- .+++|.+.+.
T Consensus 210 G~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~-~~~----~~~~~~~~~~ 260 (307)
T PRK13604 210 ANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE-NLV----VLRNFYQSVT 260 (307)
T ss_pred cCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc-chH----HHHHHHHHHH
Confidence 99999999999999999886568999999999998763 232 3445555443
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-25 Score=184.84 Aligned_cols=240 Identities=11% Similarity=0.076 Sum_probs=152.5
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
+...+..+||.+|..+...+.. .++.|+||++||+++.....|..+++.|.+. |+|+++|+||
T Consensus 169 e~v~i~~~~g~~l~g~l~~P~~----------------~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG 232 (414)
T PRK05077 169 KELEFPIPGGGPITGFLHLPKG----------------DGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPS 232 (414)
T ss_pred EEEEEEcCCCcEEEEEEEECCC----------------CCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCC
Confidence 3344444567688877655421 1356777777777765432788888889887 9999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc
Q 020916 101 FGGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177 (320)
Q Consensus 101 ~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 177 (320)
+|.|.......+......++.+.+... +.+++.++|||+||.+++.+|..+|++|+++|+++++........ ....
T Consensus 233 ~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~-~~~~ 311 (414)
T PRK05077 233 VGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP-KRQQ 311 (414)
T ss_pred CCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcch-hhhh
Confidence 999975432233333444555555544 457899999999999999999999999999999988753110000 0000
Q ss_pred cccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
.........+.... . ........+... +..+..........++++|+|+|+|
T Consensus 312 -------------~~p~~~~~~la~~l-g---~~~~~~~~l~~~-----------l~~~sl~~~~~l~~~i~~PvLiI~G 363 (414)
T PRK05077 312 -------------QVPEMYLDVLASRL-G---MHDASDEALRVE-----------LNRYSLKVQGLLGRRCPTPMLSGYW 363 (414)
T ss_pred -------------hchHHHHHHHHHHh-C---CCCCChHHHHHH-----------hhhccchhhhhhccCCCCcEEEEec
Confidence 00000011111000 0 000000111110 0000000000012568999999999
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 258 EDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++|+++|.+..+.+.+..+ +.++++++++ ++.+.++++.+.|.+||++.
T Consensus 364 ~~D~ivP~~~a~~l~~~~~--~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 364 KNDPFSPEEDSRLIASSSA--DGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCCCCCCHHHHHHHHHhCC--CCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 9999999999999988887 8999999985 45679999999999999864
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-26 Score=183.34 Aligned_cols=267 Identities=14% Similarity=0.102 Sum_probs=154.1
Q ss_pred CCceEEEcCCCceeeEe-ccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc-cHHHHHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNFW-VPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV-TWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~vi~~d 97 (320)
.+.+.++++||..+.+. ...+. ..+.+|+||++||++++... .+..+++.|.+. |+|+++|
T Consensus 31 ~~~~~~~~~dg~~~~l~w~~~~~----------------~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d 94 (324)
T PRK10985 31 PYWQRLELPDGDFVDLAWSEDPA----------------QARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMH 94 (324)
T ss_pred cceeEEECCCCCEEEEecCCCCc----------------cCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEe
Confidence 45566888899887653 32221 11357899999999887541 345688888887 9999999
Q ss_pred CCCCCCCCCCCCC-CChhHHHHHHHHHH----HHhCCCcEEEEEeChhHHHHHHHHHhCccc--cccEEEeccccccccc
Q 020916 98 LLFFGGSITDEAD-RSPTFQAQCLATGL----AKLGVDKCVLVGFSYGGMVSFKVAELYPNL--VQAMVVSGSILAMTDS 170 (320)
Q Consensus 98 ~~G~G~s~~~~~~-~~~~~~~~~l~~~l----~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~ 170 (320)
+||||.+...... +.. ...+|+..++ +.++..+++++||||||.+++.++.++++. +.++|+++++......
T Consensus 95 ~rG~g~~~~~~~~~~~~-~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~ 173 (324)
T PRK10985 95 FRGCSGEPNRLHRIYHS-GETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEAC 173 (324)
T ss_pred CCCCCCCccCCcceECC-CchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHH
Confidence 9999987543221 111 1234444433 345667899999999999988888876543 8899999887643211
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhh-hccc--cCCch------hHHHHHHHHhcChhhHHHHhhhhhccCC
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVAT-YKKL--WFPSC------LYKDFLEVMFANRKERAELLEGLLISNK 241 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (320)
.. .+... ......... ...+........ .... ....+ ...++-+...............+.....
T Consensus 174 ~~--~~~~~-~~~~~~~~l---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~ 247 (324)
T PRK10985 174 SY--RMEQG-FSRVYQRYL---LNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSA 247 (324)
T ss_pred HH--HHhhh-HHHHHHHHH---HHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCCh
Confidence 10 00000 000000000 000110000000 0000 00000 0111111111111011111111111223
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh-----HHHHHHHHHHHHhhh
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP-----CAYNRCLKQFLASLH 312 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~~ 312 (320)
...+.++++|+++|+|++|++++++....+.+..+ +.++++++++||+.+++.. ....+.+.+|++...
T Consensus 248 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 248 LPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPP--NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred HHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCC--CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 35668899999999999999999888877776666 8899999999999998742 467778888886543
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=180.43 Aligned_cols=253 Identities=12% Similarity=0.166 Sum_probs=154.9
Q ss_pred cCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-------------------------HH
Q 020916 28 IEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-------------------------QF 82 (320)
Q Consensus 28 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-------------------------~~ 82 (320)
..||.+|+++.+.+ +..+.+||++||++++....| ..
T Consensus 4 ~~~g~~l~~~~~~~------------------~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~ 65 (332)
T TIGR01607 4 NKDGLLLKTYSWIV------------------KNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDS 65 (332)
T ss_pred CCCCCeEEEeeeec------------------cCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHH
Confidence 34788887766553 135679999999998875111 46
Q ss_pred HHHHhhcc-ceEEecCCCCCCCCCCCCC--C--CChhHHHHHHHHHHHHhC------------------------CCcEE
Q 020916 83 QVGALTKK-YSVYIPDLLFFGGSITDEA--D--RSPTFQAQCLATGLAKLG------------------------VDKCV 133 (320)
Q Consensus 83 ~~~~l~~~-~~vi~~d~~G~G~s~~~~~--~--~~~~~~~~~l~~~l~~~~------------------------~~~~~ 133 (320)
+++.|.+. |.|+++|+||||.|..... . .+++++++|+.++++.+. ..|++
T Consensus 66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 78999887 9999999999999985421 1 478888999999987642 24799
Q ss_pred EEEeChhHHHHHHHHHhCcc--------ccccEEEecccccccccccc--cccccccccccccccCcCcHHHHHHHHhHh
Q 020916 134 LVGFSYGGMVSFKVAELYPN--------LVQAMVVSGSILAMTDSINE--TNLNRLGVSSSSELLLPNSVKGLKALLSVA 203 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (320)
|+||||||.+++.++..+++ .++++|+++|.......... ........ .....+..+....
T Consensus 146 l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~---------~l~~~~~~~~p~~ 216 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYL---------PVMNFMSRVFPTF 216 (332)
T ss_pred EeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHH---------HHHHHHHHHCCcc
Confidence 99999999999999876542 58899988887532110000 00000000 0000000000000
Q ss_pred hhcc-ccCC--chhHHHHHHHHhc-----ChhhHHHHhhhhhccCCCCCCCCC--CCcEEEEecCCCCCCCHHHHHHHHH
Q 020916 204 TYKK-LWFP--SCLYKDFLEVMFA-----NRKERAELLEGLLISNKDPTVPNF--PQRVHLLWGEDDQIFNVELAHNMKE 273 (320)
Q Consensus 204 ~~~~-~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~ 273 (320)
.... .+.. +...+.+....+. .......++..... ....+..+ ++|+|+++|++|.+++++.++.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~--~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~ 294 (332)
T TIGR01607 217 RISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDT--LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYN 294 (332)
T ss_pred cccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHH--HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHH
Confidence 0000 0000 0111111111100 00111111111110 01123334 7899999999999999999999888
Q ss_pred HhCCCCeEEEEecCCCcccccCC-hHHHHHHHHHHHH
Q 020916 274 QLGADHVTFQGIKKAGHLVHLER-PCAYNRCLKQFLA 309 (320)
Q Consensus 274 ~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~ 309 (320)
.+...+++++++++++|.++.|. ++++.+.|.+||+
T Consensus 295 ~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 295 KLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred hccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 76534789999999999999874 7899999999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-25 Score=172.71 Aligned_cols=228 Identities=12% Similarity=0.073 Sum_probs=135.9
Q ss_pred CCCeEEEEcCCCC----CccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-----CCCc
Q 020916 62 SKPVVVLVHGFAA----EGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-----GVDK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~~----~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-----~~~~ 131 (320)
.++.||++||++. +.. .|..+++.|++. |+|+++|+||||.|.... .+.+.+.+|+.++++.+ +.++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~~~~~~~l~~~~~g~~~ 101 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADIAAAIDAFREAAPHLRR 101 (274)
T ss_pred CCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 4567888888653 233 466778999887 999999999999987432 45667778888888776 4567
Q ss_pred EEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCC
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFP 211 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (320)
++++|||+||.+++.++.. +++|+++|++++.................. ..... ...+.... ...+-.
T Consensus 102 i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~-~g~~~~ 169 (274)
T TIGR03100 102 IVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYL----GQLLS------ADFWRKLL-SGEVNL 169 (274)
T ss_pred EEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHH----HHHhC------hHHHHHhc-CCCccH
Confidence 9999999999999999865 468999999997643211111000000000 00000 00000000 001100
Q ss_pred chhHHHHHHHHh-----cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHH------HHHHHHhCCCCe
Q 020916 212 SCLYKDFLEVMF-----ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELA------HNMKEQLGADHV 280 (320)
Q Consensus 212 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~------~~~~~~~~~~~~ 280 (320)
......+..... ........+. ......+..+++|+++++|+.|...+ ... ..+.+.+...++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v 243 (274)
T TIGR03100 170 GSSLRGLGDALLKARQKGDEVAHGGLA-----ERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGI 243 (274)
T ss_pred HHHHHHHHHHHHhhhhcCCCcccchHH-----HHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCe
Confidence 011111111000 0000000000 01112345678999999999998863 222 445555522389
Q ss_pred EEEEecCCCcccccC-ChHHHHHHHHHHHHh
Q 020916 281 TFQGIKKAGHLVHLE-RPCAYNRCLKQFLAS 310 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 310 (320)
+++.+++++|++..+ .++++.+.|.+||++
T Consensus 244 ~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 244 ERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 999999999998655 559999999999963
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=155.45 Aligned_cols=181 Identities=18% Similarity=0.174 Sum_probs=126.0
Q ss_pred CeEEEEcCCCCCccccHHH--HHHHhhc---cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeC
Q 020916 64 PVVVLVHGFAAEGIVTWQF--QVGALTK---KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFS 138 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~--~~~~l~~---~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS 138 (320)
|+||++||++++.. .|.. +.+.+.+ .++|+++|+|||+ ++.++++.++++.++.++++++|||
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 68999999999999 8874 4466654 4999999999985 3578899999999998999999999
Q ss_pred hhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCC--chhHH
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFP--SCLYK 216 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 216 (320)
+||.+++.+|.++|. .+|+++|+...... .. ...... .. .... -....
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~-----~~--------------------~~~~~~-~~-~~~~~~~~~~~ 119 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRPFEL-----LT--------------------DYLGEN-EN-PYTGQQYVLES 119 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCHHHH-----HH--------------------HhcCCc-cc-ccCCCcEEEcH
Confidence 999999999999983 46888876531100 00 000000 00 0000 00001
Q ss_pred HHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 217 DFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.+ +..+...+.. .+. ..+|+++++|++|.++|++.+..+.+. ++.++++|++|.+ ..
T Consensus 120 ~~--------------~~d~~~~~~~-~i~-~~~~v~iihg~~De~V~~~~a~~~~~~-----~~~~~~~ggdH~f--~~ 176 (190)
T PRK11071 120 RH--------------IYDLKVMQID-PLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA-----CRQTVEEGGNHAF--VG 176 (190)
T ss_pred HH--------------HHHHHhcCCc-cCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh-----cceEEECCCCcch--hh
Confidence 11 1111111212 233 677899999999999999999998884 4567889999987 44
Q ss_pred hHHHHHHHHHHHH
Q 020916 297 PCAYNRCLKQFLA 309 (320)
Q Consensus 297 ~~~~~~~i~~fl~ 309 (320)
.+++.+.|.+|+.
T Consensus 177 ~~~~~~~i~~fl~ 189 (190)
T PRK11071 177 FERYFNQIVDFLG 189 (190)
T ss_pred HHHhHHHHHHHhc
Confidence 5888999999875
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.2e-23 Score=160.06 Aligned_cols=204 Identities=18% Similarity=0.219 Sum_probs=127.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCCh-------hHHHHHHHHHHHHh-----
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSP-------TFQAQCLATGLAKL----- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~-------~~~~~~l~~~l~~~----- 127 (320)
+..|+||++||++++.. .|..++..|.+. |+|+++|+||||.+......... ....+++.++++.+
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35789999999999988 899999999887 99999999999986432211111 12234444444432
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhc
Q 020916 128 -GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK 206 (320)
Q Consensus 128 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (320)
+.++++++|||+||.+++.++.++|+....++++++..... +.... ..
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~----~~ 152 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTS---------------------------LARTL----FP 152 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHH---------------------------HHHHh----cc
Confidence 34689999999999999999998886433444443321100 00000 00
Q ss_pred cccCC-chhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC-CCcEEEEecCCCCCCCHHHHHHHHHHhCCC----Ce
Q 020916 207 KLWFP-SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF-PQRVHLLWGEDDQIFNVELAHNMKEQLGAD----HV 280 (320)
Q Consensus 207 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~ 280 (320)
..... ...... .......+...+....+.++ ++|+|+++|++|.++|++..+.+.+.+... ++
T Consensus 153 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~ 221 (249)
T PRK10566 153 PLIPETAAQQAE-----------FNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNL 221 (249)
T ss_pred cccccccccHHH-----------HHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcce
Confidence 00000 000000 00001111111112234455 689999999999999999999999888621 36
Q ss_pred EEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+++.++++||.+. + ...+.+.+||++.
T Consensus 222 ~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 222 TCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred EEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 7888999999863 3 4567888888753
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.5e-23 Score=168.23 Aligned_cols=284 Identities=19% Similarity=0.171 Sum_probs=168.0
Q ss_pred HHHHhcC--CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHH------HHHH
Q 020916 14 GLMKMAG--VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ------FQVG 85 (320)
Q Consensus 14 ~~~~~~~--~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~------~~~~ 85 (320)
++.+..| .+.+.|+++||..|......+..... ....+|+||++||+++++. .|. .++.
T Consensus 35 ~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~------------~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~ 101 (395)
T PLN02872 35 QLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRL------------GSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGF 101 (395)
T ss_pred HHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCC------------CCCCCCeEEEeCccccccc-ceeecCcccchHH
Confidence 3444444 67888999999999986653211100 1135789999999998887 763 3555
Q ss_pred Hhhcc-ceEEecCCCCCCCCCC-------CC--CCCChhHHH-HHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 86 ALTKK-YSVYIPDLLFFGGSIT-------DE--ADRSPTFQA-QCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 86 ~l~~~-~~vi~~d~~G~G~s~~-------~~--~~~~~~~~~-~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.|++. |+|+++|+||++.|.. .. .++++++++ .|+.++++++ ..++++++|||+||.+++.++ .+
T Consensus 102 ~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~ 180 (395)
T PLN02872 102 ILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQ 180 (395)
T ss_pred HHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hC
Confidence 67776 9999999999876532 11 136777777 7999999986 347899999999999998555 56
Q ss_pred cc---ccccEEEecccccccccccccc--ccccccc----cc-ccccCcCcHHHHHHHHhH--------------hhhcc
Q 020916 152 PN---LVQAMVVSGSILAMTDSINETN--LNRLGVS----SS-SELLLPNSVKGLKALLSV--------------ATYKK 207 (320)
Q Consensus 152 p~---~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~----~~-~~~~~~~~~~~~~~~~~~--------------~~~~~ 207 (320)
|+ +|+.+++++|............ +...... .+ ...+.+.. ..+..+... .....
T Consensus 181 p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~C~~~~~c~~~~~~~~g~~ 259 (395)
T PLN02872 181 PNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRS-DVLVKLLDSICEGHMDCNDLLTSITGTN 259 (395)
T ss_pred hHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCc-HHHHHHHHHHccCchhHHHHHHHHhCCC
Confidence 76 6888888888764322111100 0000000 00 00001110 001111100 00000
Q ss_pred ccCCchhHHHHHHHHh--cChhhHHHHh----------------hhhhc----cCCCCCCCCC--CCcEEEEecCCCCCC
Q 020916 208 LWFPSCLYKDFLEVMF--ANRKERAELL----------------EGLLI----SNKDPTVPNF--PQRVHLLWGEDDQIF 263 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~--~~~~~~~~~~----------------~~~~~----~~~~~~~~~~--~~P~l~i~g~~D~~~ 263 (320)
..+.......++.... ...+....+. ..+.. ....-.+.++ ++|+++++|++|.++
T Consensus 260 ~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv 339 (395)
T PLN02872 260 CCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLA 339 (395)
T ss_pred cccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCC
Confidence 0011111111111100 0000000000 01100 1112345666 579999999999999
Q ss_pred CHHHHHHHHHHhCCCCeEEEEecCCCccc---ccCChHHHHHHHHHHHHhhhh
Q 020916 264 NVELAHNMKEQLGADHVTFQGIKKAGHLV---HLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+++..+.+.+.++ ...+++.+++++|.. ..+.|+++.+.|.+|+++...
T Consensus 340 ~~~dv~~l~~~Lp-~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 340 DVTDVEHTLAELP-SKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred CHHHHHHHHHHCC-CccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 9999999999998 236888999999963 458899999999999987554
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=169.11 Aligned_cols=209 Identities=23% Similarity=0.286 Sum_probs=131.4
Q ss_pred ceEEecCCCCCCCCCC---C-CCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc-
Q 020916 91 YSVYIPDLLFFGGSIT---D-EADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL- 165 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~---~-~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~- 165 (320)
|+|+++|+||+|.|++ . ...++.+++++++..+++.++.++++++||||||.+++.+|..+|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 2 3568899999999999999999999999999999999999999999999999999862
Q ss_pred ---ccccccccc-ccccccccccccccCcCcHHHHHHHHhHhh-----hccccCCchhHHHHHHHHhcC--hhhHHH---
Q 020916 166 ---AMTDSINET-NLNRLGVSSSSELLLPNSVKGLKALLSVAT-----YKKLWFPSCLYKDFLEVMFAN--RKERAE--- 231 (320)
Q Consensus 166 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~--- 231 (320)
......... ...... .................... ..................... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQL----LDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFW 156 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhH----HHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcc
Confidence 000000000 000000 00000000000000000000 000000000000000000000 000000
Q ss_pred -HhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHH
Q 020916 232 -LLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLK 305 (320)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 305 (320)
........+....+..+++|+++++|++|.++|++....+.+.++ +.++++++++||+.+++.|+++.+.|.
T Consensus 157 ~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 157 NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP--NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST--TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC--CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 011111112223456699999999999999999999999999998 899999999999999999999998875
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-22 Score=166.57 Aligned_cols=241 Identities=12% Similarity=0.194 Sum_probs=144.5
Q ss_pred CCCeEEEEcCCCCCccccH-----HHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHH-HHHH----HHHHhCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTW-----QFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ-CLAT----GLAKLGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~l~~----~l~~~~~~ 130 (320)
.+++||++||+..+.. .+ +.+++.|.+. |+|+++|++|+|.+.. ..++++++. ++.+ +.+..+.+
T Consensus 61 ~~~pvl~v~~~~~~~~-~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---~~~~~d~~~~~~~~~v~~l~~~~~~~ 136 (350)
T TIGR01836 61 HKTPLLIVYALVNRPY-MLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---YLTLDDYINGYIDKCVDYICRTSKLD 136 (350)
T ss_pred CCCcEEEeccccccce-eccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---cCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4568999999865554 44 5789999887 9999999999998753 335555543 2444 44455678
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc--cccccccccccccc--cCcCcH-H-----------
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE--TNLNRLGVSSSSEL--LLPNSV-K----------- 194 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~-~----------- 194 (320)
+++++||||||.+++.++..+|++|+++|+++++......... .............. ..+... .
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~ 216 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSL 216 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchh
Confidence 9999999999999999999999999999999988764322110 00000000000000 000000 0
Q ss_pred HHHHHHhHhhhccccCCchhHHHHHH--HHhcC-----hhhHHHHhhhhhc-----------cCCCCCCCCCCCcEEEEe
Q 020916 195 GLKALLSVATYKKLWFPSCLYKDFLE--VMFAN-----RKERAELLEGLLI-----------SNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~-----------~~~~~~~~~~~~P~l~i~ 256 (320)
.......... ....++....+.+ .+..+ ......++..+.. ......+.++++|+++++
T Consensus 217 ~~~~~~~~~~---~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~ 293 (350)
T TIGR01836 217 GYQKYVNLVD---ILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIY 293 (350)
T ss_pred hhHHHHHHHH---hcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEe
Confidence 0000000000 0001111112111 00000 0111111111111 011234678899999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC---hHHHHHHHHHHHHh
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER---PCAYNRCLKQFLAS 310 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 310 (320)
|++|.++|++..+.+.+.+++.+.++++++ +||..++.. ++++...|.+||.+
T Consensus 294 G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 294 AERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred cCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999999998874457778887 699887653 47899999999875
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=152.75 Aligned_cols=237 Identities=19% Similarity=0.267 Sum_probs=142.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHh---CCCcEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKL---GVDKCVL 134 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~---~~~~~~l 134 (320)
..+|.++++||++.+.- .|..++..|... .+|+++|+||||++...+ .+.+.+.+++|+.++++.+ ...+++|
T Consensus 72 t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 58999999999999999 999999999887 888999999999998766 4589999999999999987 2457999
Q ss_pred EEeChhHHHHHHHHHh--CccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh----hcc-
Q 020916 135 VGFSYGGMVSFKVAEL--YPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT----YKK- 207 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~- 207 (320)
|||||||.+|.+.|.. -|. +.|+++++-.-...- ..+......-...+..++.+...+.... .+.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAm-------eAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~ 222 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAM-------EALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLRNR 222 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEechHHH-------HHHHHHHHHHhcCCccccchhhHHHHHhcccccccc
Confidence 9999999999888754 355 889988875421100 0000000000001111111111111100 000
Q ss_pred ----ccCCchhHHHHH-HHHh--cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCe
Q 020916 208 ----LWFPSCLYKDFL-EVMF--ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280 (320)
Q Consensus 208 ----~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 280 (320)
..++..+...-- ..+. .+......++..+... ....+-...+|-++|.+..|..-. +. .. -+.. ...
T Consensus 223 ~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~g-LS~~Fl~~p~~klLilAg~d~LDk-dL--ti-GQMQ-Gk~ 296 (343)
T KOG2564|consen 223 DSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKG-LSDKFLGLPVPKLLILAGVDRLDK-DL--TI-GQMQ-GKF 296 (343)
T ss_pred ccceEecchheeeccCCCcEEEEeeccccchhHHHHHhh-hhhHhhCCCccceeEEecccccCc-ce--ee-eeec-cce
Confidence 000100000000 0000 0000011111111111 112334456777777777776521 11 01 1122 477
Q ss_pred EEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
++.+++.+||+.+.+.|..++..+..|+.+..
T Consensus 297 Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 297 QLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred eeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 89999999999999999999999999998754
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.5e-22 Score=165.31 Aligned_cols=231 Identities=15% Similarity=0.090 Sum_probs=142.4
Q ss_pred CCCeEEEEcCCCCCccccHH-----HHHHHhhcc-ceEEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQ-----FQVGALTKK-YSVYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCV 133 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~-----~~~~~l~~~-~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~ 133 (320)
.+++||++||+..... .|+ .+++.|.+. |+|+++|++|+|.+.... .++..+.+.+.+..+++.++.++++
T Consensus 187 ~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVN 265 (532)
T ss_pred CCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeE
Confidence 5789999999987777 774 688999887 999999999999886432 2233344556677777777889999
Q ss_pred EEEeChhHHHHH----HHHHhC-ccccccEEEeccccccccccccccccc-ccc-----cccccccCcCc-----HH---
Q 020916 134 LVGFSYGGMVSF----KVAELY-PNLVQAMVVSGSILAMTDSINETNLNR-LGV-----SSSSELLLPNS-----VK--- 194 (320)
Q Consensus 134 lvGhS~Gg~~a~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~-----~~--- 194 (320)
++|||+||.++. .++... +++|++++++++...+........+.. ... ........+.. +.
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999862 245555 778999999999876543221111000 000 00000000000 00
Q ss_pred ----HHHHHHhHhhhcc--------------ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEe
Q 020916 195 ----GLKALLSVATYKK--------------LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 195 ----~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (320)
.+...+....... ..++.....++++.++...... -..+...+....+..+++|+++|.
T Consensus 346 p~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~---~G~~~v~g~~~dL~~I~vPvLvV~ 422 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALT---TGGLEVCGVRLDLSKVKVPVYIIA 422 (532)
T ss_pred hhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCc---CCeeEECCEecchhhCCCCEEEEe
Confidence 0000111010000 1111222222222222111100 011111233367888999999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 298 (320)
|++|.++|.+.+..+.+.++ +.+..+++++||..++++|.
T Consensus 423 G~~D~IvP~~sa~~l~~~i~--~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 423 TREDHIAPWQSAYRGAALLG--GPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred eCCCCcCCHHHHHHHHHHCC--CCEEEEECCCCCchHhhCCC
Confidence 99999999999999999988 77888999999999887663
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-21 Score=142.01 Aligned_cols=227 Identities=16% Similarity=0.119 Sum_probs=155.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH-HhCCCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA-KLGVDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~lvGhS~ 139 (320)
..+..++|+|-.|+++. .|+.+...|.....++++++||+|..-......+++.+++.+...+. -...+++.++||||
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 46788999999999999 99999999998899999999999998777777899999999988887 34457899999999
Q ss_pred hHHHHHHHHHhCcc---ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHH
Q 020916 140 GGMVSFKVAELYPN---LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 140 Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
||++|.++|.+... .+..+.+.++..+.... .... ........+..+..........+.+..+.
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~--~~~i-----------~~~~D~~~l~~l~~lgG~p~e~led~El~ 150 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDR--GKQI-----------HHLDDADFLADLVDLGGTPPELLEDPELM 150 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc--cCCc-----------cCCCHHHHHHHHHHhCCCChHHhcCHHHH
Confidence 99999999987532 25666666554431110 0000 00011111122222111111111221111
Q ss_pred HHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 217 DFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.+....++. .....+. +.. ..-..++||+.++.|++|..+..+....|.++.. ...++++++| ||+...++
T Consensus 151 ~l~LPilRA---D~~~~e~---Y~~-~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fdG-gHFfl~~~ 221 (244)
T COG3208 151 ALFLPILRA---DFRALES---YRY-PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFDG-GHFFLNQQ 221 (244)
T ss_pred HHHHHHHHH---HHHHhcc---ccc-CCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEecC-cceehhhh
Confidence 111111111 1111111 111 1236789999999999999999999999999887 6889999997 99999999
Q ss_pred hHHHHHHHHHHHHh
Q 020916 297 PCAYNRCLKQFLAS 310 (320)
Q Consensus 297 ~~~~~~~i~~fl~~ 310 (320)
.+++.+.|.+.+..
T Consensus 222 ~~~v~~~i~~~l~~ 235 (244)
T COG3208 222 REEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998864
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=143.31 Aligned_cols=193 Identities=19% Similarity=0.198 Sum_probs=138.8
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--VDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvGh 137 (320)
..++++++||...+.. ....+...|... ++|+.+|++|+|.|.........-+.++.+-+.++.-. .++++|+|+
T Consensus 59 ~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~ 137 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQ 137 (258)
T ss_pred cceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEe
Confidence 3589999999976665 444555566663 99999999999999987755444333444444444332 578999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
|+|+..++.+|.+.| +.++||.+|........... .....+++.
T Consensus 138 SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~-----------------------------~~~~~~~d~----- 181 (258)
T KOG1552|consen 138 SIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPD-----------------------------TKTTYCFDA----- 181 (258)
T ss_pred cCCchhhhhHhhcCC--cceEEEeccchhhhhhhccC-----------------------------cceEEeecc-----
Confidence 999999999999998 99999999875321110000 000000000
Q ss_pred HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 218 FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
....+.+..++||+|++||++|.+++.....++.+..+ ...+..++.|+||.-..- .
T Consensus 182 ---------------------f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k-~~~epl~v~g~gH~~~~~-~ 238 (258)
T KOG1552|consen 182 ---------------------FPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCK-EKVEPLWVKGAGHNDIEL-Y 238 (258)
T ss_pred ---------------------ccccCcceeccCCEEEEecccCceecccccHHHHHhcc-ccCCCcEEecCCCccccc-C
Confidence 00134678899999999999999999999999999988 456888889999986654 4
Q ss_pred HHHHHHHHHHHHhhhhc
Q 020916 298 CAYNRCLKQFLASLHAD 314 (320)
Q Consensus 298 ~~~~~~i~~fl~~~~~~ 314 (320)
.++.+.+..|+.....+
T Consensus 239 ~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 239 PEYIEHLRRFISSVLPS 255 (258)
T ss_pred HHHHHHHHHHHHHhccc
Confidence 45888999999877654
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-21 Score=175.33 Aligned_cols=247 Identities=19% Similarity=0.259 Sum_probs=152.7
Q ss_pred CCCeEEEEcCCCCCccccHHHH-----HHHhhcc-ceEEecCCCCCCCCCCCCC--CCChhHHHHHHHHHHHH---hCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ-----VGALTKK-YSVYIPDLLFFGGSITDEA--DRSPTFQAQCLATGLAK---LGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~-----~~~l~~~-~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~l~~~l~~---~~~~ 130 (320)
.+++|||+||++.+.. .|+.. ++.|.+. |+|+++|+ |.++.+.. ..++.+++..+.+.++. +..+
T Consensus 66 ~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 6789999999999998 99865 7889777 99999994 66655432 24666666666666654 3346
Q ss_pred cEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccccccc-------ccccc-cccccCcCc---------
Q 020916 131 KCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNR-------LGVSS-SSELLLPNS--------- 192 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~--------- 192 (320)
+++++||||||.+++.++..+ +++|+++|+++++..+........... +.... ......+..
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l 221 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQML 221 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhc
Confidence 899999999999999998755 558999999988865432211000000 00000 000000000
Q ss_pred -----HHHHHHHHhHhhhccccCCchhHHHHHHHH-h--cChhhHHHHhhhhhcc-----------CCCCCCCCCCCcEE
Q 020916 193 -----VKGLKALLSVATYKKLWFPSCLYKDFLEVM-F--ANRKERAELLEGLLIS-----------NKDPTVPNFPQRVH 253 (320)
Q Consensus 193 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~P~l 253 (320)
......++..........+++....+.... + ........+...+... .....+.++++|+|
T Consensus 222 ~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L 301 (994)
T PRK07868 222 DPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVL 301 (994)
T ss_pred ChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEE
Confidence 000111111111111112222223332222 0 0111122222222211 11135789999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEE-EEecCCCccccc---CChHHHHHHHHHHHHhhhhc
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTF-QGIKKAGHLVHL---ERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~~~~ 314 (320)
+|+|++|.++|++..+.+.+.++ +.++ .+++++||+.++ ..++++...|.+||.+....
T Consensus 302 ~i~G~~D~ivp~~~~~~l~~~i~--~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 302 AFVGEVDDIGQPASVRGIRRAAP--NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred EEEeCCCCCCCHHHHHHHHHhCC--CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 99999999999999999999998 7776 677899999775 35788999999999986543
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-20 Score=149.22 Aligned_cols=242 Identities=27% Similarity=0.335 Sum_probs=145.4
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhcc---ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK---YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~---~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
+|+|+++||++++.. .|......+... |+++++|+||||.|. .. .......++++..+++.++..+++++|||+
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 97 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDALGLEKVVLVGHSM 97 (282)
T ss_pred CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHhCCCceEEEEecc
Confidence 569999999999988 887743333332 899999999999997 22 334555589999999999988899999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccc--cccccccccccccCcCc-HHHHHHHHhHhh-hc---------
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN--LNRLGVSSSSELLLPNS-VKGLKALLSVAT-YK--------- 206 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~--------- 206 (320)
||.+++.++.++|++++++|++++............ ........... ..... ............ ..
T Consensus 98 Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (282)
T COG0596 98 GGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALAD-LLLGLDAAAFAALLAALGLLAALAAAARAG 176 (282)
T ss_pred cHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhh-hhhccchhhhhhhhhcccccccccccchhc
Confidence 999999999999999999999998754111000000 00000000000 00000 000000000000 00
Q ss_pred -cccCCchhHHHHHHHHhcChh-hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEE
Q 020916 207 -KLWFPSCLYKDFLEVMFANRK-ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQG 284 (320)
Q Consensus 207 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
..................... ....................+++|+++++|++|.+.+......+.+..+. ..++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~ 255 (282)
T COG0596 177 LAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVV 255 (282)
T ss_pred cccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEE
Confidence 000000000000000000000 00000011110122245667889999999999977777666667777761 389999
Q ss_pred ecCCCcccccCChHHHHHHHHHHHH
Q 020916 285 IKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 285 ~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
++++||+++.++|+.+.+.+.+|++
T Consensus 256 ~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 256 IPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred eCCCCCcchhhcHHHHHHHHHHHHh
Confidence 9999999999999999988888544
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.4e-22 Score=140.21 Aligned_cols=222 Identities=16% Similarity=0.184 Sum_probs=156.1
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc--ceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~vi~~d~~ 99 (320)
+.-.+.++|.++|+-|.-.. +.+.|+++++||..++-. ..-..+.-+-.+ .+|+.+++|
T Consensus 55 e~i~l~T~D~vtL~a~~~~~------------------E~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYR 115 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLMLS------------------ESSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYR 115 (300)
T ss_pred eEEEEEcCcceeEeeeeecc------------------cCCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEee
Confidence 34445566888888765543 148899999999999887 666666655444 899999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
|+|.|........+.. |-.++++++ +..++++.|.|+||.+|+.+|+++.+++.++|+-++....+....+
T Consensus 116 GYG~S~GspsE~GL~l---Ds~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~ 192 (300)
T KOG4391|consen 116 GYGKSEGSPSEEGLKL---DSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIP 192 (300)
T ss_pred ccccCCCCccccceec---cHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhh
Confidence 9999998765433332 334445544 3468999999999999999999999999999998877643322111
Q ss_pred cccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEE
Q 020916 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVH 253 (320)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 253 (320)
.. .+- ..+.+....+...| .....+...+.|.|
T Consensus 193 ~v-------------~p~----~~k~i~~lc~kn~~------------------------------~S~~ki~~~~~P~L 225 (300)
T KOG4391|consen 193 LV-------------FPF----PMKYIPLLCYKNKW------------------------------LSYRKIGQCRMPFL 225 (300)
T ss_pred ee-------------ccc----hhhHHHHHHHHhhh------------------------------cchhhhccccCceE
Confidence 00 000 00111111111110 01123446678999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+|.|.+|.++|+-..+.+.+..++...++.++|++.|.-..- -+-..++|.+||.+...
T Consensus 226 FiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 226 FISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred EeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhcc
Confidence 999999999999999999999987788999999999975443 35678899999987654
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-21 Score=137.99 Aligned_cols=142 Identities=25% Similarity=0.314 Sum_probs=112.6
Q ss_pred eEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHH--HHhCCCcEEEEEeChhH
Q 020916 65 VVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGL--AKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 65 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l--~~~~~~~~~lvGhS~Gg 141 (320)
+||++||++++.. .|..+++.|.+. |.|+.+|+|++|.+... ..++++.+.+ +..+.++++++|||+||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGA-------DAVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHS-------HHHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchh-------HHHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 5899999999998 999999999999 99999999999988321 1222222222 12366899999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEV 221 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
.+++.++.+. .+++++|++++.+. .
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~--~---------------------------------------------------- 97 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD--S---------------------------------------------------- 97 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG--C----------------------------------------------------
T ss_pred HHHHHHhhhc-cceeEEEEecCccc--h----------------------------------------------------
Confidence 9999999988 68999999998210 0
Q ss_pred HhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 222 MFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
..+...+.|+++++|++|..++.+..+.+.+.++ .+.++++++|++|+
T Consensus 98 ---------------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ---------------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp ---------------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred ---------------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 0123445599999999999999999999999998 67999999999995
|
... |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-19 Score=136.69 Aligned_cols=264 Identities=19% Similarity=0.191 Sum_probs=159.4
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH-----HHhhccceEEecCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV-----GALTKKYSVYIPDL 98 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~-----~~l~~~~~vi~~d~ 98 (320)
+.++++ -..+++.+.|+. ++++|++|-.|-.|.+...+|..+. +.+.+++.++-+|.
T Consensus 2 h~v~t~-~G~v~V~v~G~~-----------------~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~a 63 (283)
T PF03096_consen 2 HDVETP-YGSVHVTVQGDP-----------------KGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDA 63 (283)
T ss_dssp EEEEET-TEEEEEEEESS-------------------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-
T ss_pred ceeccC-ceEEEEEEEecC-----------------CCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeC
Confidence 567775 447888888872 2369999999999988873376664 56777799999999
Q ss_pred CCCCCCCCC--CC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 99 LFFGGSITD--EA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 99 ~G~G~s~~~--~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
||+...... .. ..+++++++++..++++++++.++-+|-..||.+..++|..+|++|.|+||+++........ ++
T Consensus 64 PGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~-Ew 142 (283)
T PF03096_consen 64 PGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM-EW 142 (283)
T ss_dssp TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH-HH
T ss_pred CCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH-HH
Confidence 999665433 22 36899999999999999999999999999999999999999999999999999887543321 11
Q ss_pred ccccccccccccccCcCcHHH-H-HHHHhHhhhccccCCchhHHHHHHHHhc--ChhhHHHHhhhhh-ccCCCCCCCCCC
Q 020916 175 NLNRLGVSSSSELLLPNSVKG-L-KALLSVATYKKLWFPSCLYKDFLEVMFA--NRKERAELLEGLL-ISNKDPTVPNFP 249 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~ 249 (320)
...++....+...-....... + ...+...... ...+..+.+.+.+.. +......++..+. +.+.....+...
T Consensus 143 ~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~---~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~ 219 (283)
T PF03096_consen 143 FYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEE---NNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLG 219 (283)
T ss_dssp HHHHHH-------CTTS-HHHHHHHHHS-HHHHH---CT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCC
T ss_pred HHHHHhcccccccccccchHHhhhhccccccccc---ccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCC
Confidence 111111111111111111111 0 1111111111 123445555554432 2234444444442 334445667778
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
||+|++.|+..+. .+.+..+..++...+.++..++++|=.+..|+|+.+++.++-|++..
T Consensus 220 c~vLlvvG~~Sp~--~~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 220 CPVLLVVGDNSPH--VDDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp S-EEEEEETTSTT--HHHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCcc--hhhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 9999999999887 56778888888767889999999999999999999999999999875
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-19 Score=141.78 Aligned_cols=263 Identities=17% Similarity=0.165 Sum_probs=173.4
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--c--------cHHHHH---HHhhcc-ceEEe
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--V--------TWQFQV---GALTKK-YSVYI 95 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~--------~~~~~~---~~l~~~-~~vi~ 95 (320)
++.+|.|..+|.... .....||++|++.+++. . .|..++ +.+... |-||+
T Consensus 34 ~~~~vay~T~Gtln~----------------~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc 97 (368)
T COG2021 34 SDARVAYETYGTLNA----------------EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVIC 97 (368)
T ss_pred cCcEEEEEecccccc----------------cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEE
Confidence 567788988886422 25678999999998654 1 455554 235555 99999
Q ss_pred cCCCCCC-CCCCCC-------------CCCChhHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCccccccEEE
Q 020916 96 PDLLFFG-GSITDE-------------ADRSPTFQAQCLATGLAKLGVDKCV-LVGFSYGGMVSFKVAELYPNLVQAMVV 160 (320)
Q Consensus 96 ~d~~G~G-~s~~~~-------------~~~~~~~~~~~l~~~l~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl 160 (320)
+|..|.+ .|+.|. +..++.++++.-..++++++++++. +||-||||+.|+.++..+|++|.++|.
T Consensus 98 ~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ 177 (368)
T COG2021 98 TNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIP 177 (368)
T ss_pred ecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhhe
Confidence 9999865 444332 2256778888888899999999976 889999999999999999999999999
Q ss_pred eccccccccccccc-cccc---cccccc-----ccccCcCcHHHHHHHHhHhhhccc--------------cC----Cch
Q 020916 161 SGSILAMTDSINET-NLNR---LGVSSS-----SELLLPNSVKGLKALLSVATYKKL--------------WF----PSC 213 (320)
Q Consensus 161 ~~~~~~~~~~~~~~-~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--------------~~----~~~ 213 (320)
+++........... ...+ ...+.+ .....+...-.+.+.+....+... .. ...
T Consensus 178 ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f 257 (368)
T COG2021 178 IATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRF 257 (368)
T ss_pred ecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhH
Confidence 98876543322110 0000 000111 011112222222333322222210 00 012
Q ss_pred hHHHHHHHHh------cChhhHHHHhhhhhccCCCCC-------CCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCe
Q 020916 214 LYKDFLEVMF------ANRKERAELLEGLLISNKDPT-------VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280 (320)
Q Consensus 214 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 280 (320)
..+.|++... .+......+...+...+.... +.++++|++++.-+.|...|++..+.+.+.++ ..
T Consensus 258 ~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~--~~ 335 (368)
T COG2021 258 AVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALP--AA 335 (368)
T ss_pred HHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhcc--cc
Confidence 3334443322 233344445556655666544 78899999999999999999999999999998 33
Q ss_pred E-EEEec-CCCcccccCChHHHHHHHHHHHHh
Q 020916 281 T-FQGIK-KAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 281 ~-~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
. +++++ ..||..++...+.+...|.+||+.
T Consensus 336 ~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 336 GALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 3 76665 779999998888899999999975
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-20 Score=140.51 Aligned_cols=268 Identities=18% Similarity=0.199 Sum_probs=153.9
Q ss_pred CCceEEEcCCCceeeE-eccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNF-WVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~d 97 (320)
...+.+.++||..+.. |...+ .+..+|.||++||+.+++...| +.+++.+.++ |.|++++
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p-----------------~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~ 111 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDP-----------------RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFH 111 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCc-----------------cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEe
Confidence 3556788887665444 55433 1246789999999987766334 4567888887 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEecccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~ 171 (320)
.|||+.+........-.-..+|+..+++.+ ...++..+|.|+||.+...+..+..+ .+.+.+.++.+......
T Consensus 112 ~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~- 190 (345)
T COG0429 112 FRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEAC- 190 (345)
T ss_pred cccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHH-
Confidence 999999876443322222336666666555 45789999999999555555544332 35666666655433110
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhc-cccCCchhHHHHHHHHh----------cChhhHHHHhhhhhccC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK-KLWFPSCLYKDFLEVMF----------ANRKERAELLEGLLISN 240 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 240 (320)
...+................+.+........ ....+... ...++.+. ............+....
T Consensus 191 ----~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~-~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aS 265 (345)
T COG0429 191 ----AYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTV-LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQAS 265 (345)
T ss_pred ----HHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHH-HHHHHhhchHHhccceeeecccCCCcHHHHHHhcc
Confidence 0000000000000000111111111111100 11112111 11111110 11111112222233344
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC----ChH-HHHHHHHHHHHhhh
Q 020916 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE----RPC-AYNRCLKQFLASLH 312 (320)
Q Consensus 241 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~~ 312 (320)
....+++|.+|+|+|++.+|++++++..-......+ +++.+..-+.+||..++. +|. ...+.+.+|++...
T Consensus 266 s~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~n-p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 266 SLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLN-PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred ccccccccccceEEEecCCCCCCChhhCCcchhcCC-CceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 457899999999999999999999988777666443 489999999899998876 443 67788888887654
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-19 Score=138.34 Aligned_cols=173 Identities=17% Similarity=0.220 Sum_probs=114.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCC-----------CCCCC---hhHHHHHHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITD-----------EADRS---PTFQAQCLATGLA 125 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~-----------~~~~~---~~~~~~~l~~~l~ 125 (320)
+.+++||++||++++.. .|..+++.|.+. ..+..++.+|...+... ..... .....+.+.+.++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 46789999999999999 999999999865 44444445554322110 00011 1122223333333
Q ss_pred ----HhC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHH
Q 020916 126 ----KLG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKAL 199 (320)
Q Consensus 126 ----~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (320)
..+ .++++++|||+||.+++.++.++|+.+.+++.+++....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-------------------------------- 140 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-------------------------------- 140 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------------------
Confidence 333 357999999999999999999998877777766542100
Q ss_pred HhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--C
Q 020916 200 LSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--A 277 (320)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~ 277 (320)
.+ .....+.|+++++|++|+++|.+..+.+.+.+. +
T Consensus 141 ----------~~--------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g 178 (232)
T PRK11460 141 ----------LP--------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLG 178 (232)
T ss_pred ----------cc--------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCC
Confidence 00 001135789999999999999999988888775 2
Q ss_pred CCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 278 DHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 278 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
.++++++++++||.+..+..+.+.+.+.+++
T Consensus 179 ~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 179 GDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 3578899999999986544444444444444
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.5e-20 Score=141.91 Aligned_cols=105 Identities=20% Similarity=0.202 Sum_probs=86.3
Q ss_pred CCCeEEEEcCCCCCcc---ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH---hCCCcEEE
Q 020916 62 SKPVVVLVHGFAAEGI---VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK---LGVDKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~---~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~l 134 (320)
.+++|||+||++.+.. ..|..+++.|++. |+|+++|+||||.|.......++..+++|+..+++. .+.++++|
T Consensus 24 ~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~L 103 (266)
T TIGR03101 24 PRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTL 103 (266)
T ss_pred CceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4678999999986432 1567778899877 999999999999997655556777788887776544 45678999
Q ss_pred EEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 135 VGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+||||||.+++.++.++|++++++|+++|...
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999997653
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-18 Score=127.40 Aligned_cols=267 Identities=19% Similarity=0.186 Sum_probs=182.1
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH-----HHhhccceEEe
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV-----GALTKKYSVYI 95 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~-----~~l~~~~~vi~ 95 (320)
.+++.|++.- ..+++.+.|++ ++++|++|-.|..+.+...+|..+. ..+.++|-|+-
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~-----------------~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~H 83 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDP-----------------KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYH 83 (326)
T ss_pred ceeeeecccc-ccEEEEEecCC-----------------CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEe
Confidence 5788888864 57999999873 3468899999999988873476653 45666799999
Q ss_pred cCCCCCCCCCC--CCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 96 PDLLFFGGSIT--DEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 96 ~d~~G~G~s~~--~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
+|.|||-...+ +.. ..++++++++|..++++++.+.++-+|-..|+++..++|..||++|-++||+++.+......
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi 163 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI 163 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH
Confidence 99999955433 222 46899999999999999999999999999999999999999999999999999876543321
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccc--cCCchhHHHHHHHHh--cChhhHHHHhhhhhcc-CCCCCCC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL--WFPSCLYKDFLEVMF--ANRKERAELLEGLLIS-NKDPTVP 246 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~ 246 (320)
. +...++....+... ..-.....++-...+... .-..++.+.|.+.+. .+......++..+... +.....+
T Consensus 164 e-w~~~K~~s~~l~~~---Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~ 239 (326)
T KOG2931|consen 164 E-WAYNKVSSNLLYYY---GMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERP 239 (326)
T ss_pred H-HHHHHHHHHHHHhh---chhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCC
Confidence 1 11111100000000 001111222222222221 113345555555544 2223444444444322 2222222
Q ss_pred ----CCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 247 ----NFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 247 ----~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
.++||+|++.|++.+.+ +.+..+..++...+..+..+.++|-.+..++|..+++.+.-|++..
T Consensus 240 ~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 240 KLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred CcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 56699999999998874 5667777777656788999999999999999999999999999864
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.6e-19 Score=152.83 Aligned_cols=238 Identities=18% Similarity=0.185 Sum_probs=151.6
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d 97 (320)
..+..++...||.++++|...+...++. ++-|+||++||.+.... ..|....+.|+.. |.|+.++
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~-------------k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPR-------------KKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPN 430 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCC-------------CCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeC
Confidence 3445555666899999999887544321 12489999999975544 2466677888887 9999999
Q ss_pred CCCCCCCC-----CCC---CCCChhHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 98 LLFFGGSI-----TDE---ADRSPTFQAQCLATGLAKLG---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 98 ~~G~G~s~-----~~~---~~~~~~~~~~~l~~~l~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+||-+.-. ... .....+++.+.+. ++...+ .+++.++|||+||.+++..+...| ++++.+...+...
T Consensus 431 ~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 431 YRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred CCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 99754321 111 1234444444444 333333 348999999999999999999887 6777776665542
Q ss_pred ccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCC
Q 020916 167 MTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVP 246 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (320)
........... +... .......... -...+..........
T Consensus 509 ~~~~~~~~~~~------------------~~~~-------------------~~~~~~~~~~---~~~~~~~~sp~~~~~ 548 (620)
T COG1506 509 WLLYFGESTEG------------------LRFD-------------------PEENGGGPPE---DREKYEDRSPIFYAD 548 (620)
T ss_pred hhhhccccchh------------------hcCC-------------------HHHhCCCccc---ChHHHHhcChhhhhc
Confidence 11100000000 0000 0000000000 000011112223567
Q ss_pred CCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHHHhhh
Q 020916 247 NFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 247 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 312 (320)
++++|+|+|||++|..+|.+++..+.+.+. ..+++++++|+.+|.+.. ++...+.+.+.+|+++..
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999888876 457899999999999876 556778888888887754
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-19 Score=139.51 Aligned_cols=275 Identities=16% Similarity=0.132 Sum_probs=153.3
Q ss_pred CCCceEEEcCCCceeeE-eccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEec
Q 020916 20 GVQPHAVEIEPGTTMNF-WVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIP 96 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~ 96 (320)
..+.+.++++||..+.+ |..++.... +.+.+..|.||++||..+++...| +.++..+.+. |+|+++
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~-----------~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVf 160 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRC-----------RTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVF 160 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCccccc-----------CCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEE
Confidence 35677789999999888 554432110 012357799999999987766344 4555555555 999999
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCccc--cccEEEeccccccccc
Q 020916 97 DLLFFGGSITDEADRSPTFQAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAELYPNL--VQAMVVSGSILAMTDS 170 (320)
Q Consensus 97 d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~~ 170 (320)
+.||+|.+.-.....-.....+|+.++++++. ..++..+|.||||.+.+.+..+..++ +.+.+.++.+....
T Consensus 161 N~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~-- 238 (409)
T KOG1838|consen 161 NHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL-- 238 (409)
T ss_pred CCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh--
Confidence 99999998765544333344677777777764 35799999999999999999875442 44444444333211
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhh--------ccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATY--------KKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD 242 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (320)
.............+...... ..+.+.+..... ..........+++-+.+..........-..+......
T Consensus 239 ~~~~~~~~~~~~~~y~~~l~---~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~ 315 (409)
T KOG1838|consen 239 AASRSIETPLYRRFYNRALT---LNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSS 315 (409)
T ss_pred hhhhHHhcccchHHHHHHHH---HhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchh
Confidence 00000000000000000000 001111100000 0000011222222222221111112222222334445
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHH-HHHHHhCCCCeEEEEecCCCcccccCC----hHH-HHHHHHHHHHhhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAH-NMKEQLGADHVTFQGIKKAGHLVHLER----PCA-YNRCLKQFLASLH 312 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~-~~~~i~~fl~~~~ 312 (320)
..+.+|++|+|+|++.+|+++|.+..- .....- +++-+++-..+||..++|. +.. +.+.+.+|+....
T Consensus 316 ~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~n--p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 316 NYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSN--PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred hhcccccccEEEEecCCCCCCCcccCCHHHHhcC--CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 788999999999999999999986432 223333 3777777788899988875 222 3333677776543
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-17 Score=125.83 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=92.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhCCC-cEEEEEeC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLGVD-KCVLVGFS 138 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~-~~~lvGhS 138 (320)
+..+||-+||.+++.. .|+.+.+.|.+. .++|.+++||+|.++.+. ..++-.+...-+.++++.++++ +++.+|||
T Consensus 34 ~~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHS 112 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHS 112 (297)
T ss_pred CceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEec
Confidence 3458999999999999 999999999998 999999999999998766 4478888899999999999875 58889999
Q ss_pred hhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
.|+-.|+.++..+| ..++++++|+...+
T Consensus 113 rGcenal~la~~~~--~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 113 RGCENALQLAVTHP--LHGLVLINPPGLRP 140 (297)
T ss_pred cchHHHHHHHhcCc--cceEEEecCCcccc
Confidence 99999999999986 68999999887543
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.7e-18 Score=133.54 Aligned_cols=187 Identities=14% Similarity=0.163 Sum_probs=111.5
Q ss_pred CCCCeEEEEcCCCCCccccHHH---HHHHhhcc-ceEEecCCCCCCC-----CCC-------------CCC--------C
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF---QVGALTKK-YSVYIPDLLFFGG-----SIT-------------DEA--------D 110 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G~-----s~~-------------~~~--------~ 110 (320)
...|+|+++||++++.. .|.. +.+.+... +.|+.+|..++|. +.. ... .
T Consensus 45 ~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 36799999999998876 6644 33555655 9999999887661 110 000 0
Q ss_pred CChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCc
Q 020916 111 RSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLP 190 (320)
Q Consensus 111 ~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
+..+++...+....+.++.++++|+||||||..|+.++.++|+++++++.+++........ .
T Consensus 124 ~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-------~----------- 185 (283)
T PLN02442 124 YVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP-------W----------- 185 (283)
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc-------h-----------
Confidence 1122223333343444577889999999999999999999999999999988765321000 0
Q ss_pred CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHH-HHH
Q 020916 191 NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE-LAH 269 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~ 269 (320)
....+...+ . .+...... .........+...++|+++++|++|..++.. ..+
T Consensus 186 -~~~~~~~~~-----g---~~~~~~~~------------------~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~ 238 (283)
T PLN02442 186 -GQKAFTNYL-----G---SDKADWEE------------------YDATELVSKFNDVSATILIDQGEADKFLKEQLLPE 238 (283)
T ss_pred -hhHHHHHHc-----C---CChhhHHH------------------cChhhhhhhccccCCCEEEEECCCCccccccccHH
Confidence 000000000 0 00000000 0000111123456789999999999998853 233
Q ss_pred HHHHHhC--CCCeEEEEecCCCcccc
Q 020916 270 NMKEQLG--ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~~gH~~~ 293 (320)
.+.+.+. +.++++++++|.+|..+
T Consensus 239 ~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 239 NFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 3333332 24689999999999765
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-18 Score=122.41 Aligned_cols=217 Identities=21% Similarity=0.191 Sum_probs=138.7
Q ss_pred CCCCeEEEEcCCCCCccc-cHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCC-c--EEEE
Q 020916 61 PSKPVVVLVHGFAAEGIV-TWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVD-K--CVLV 135 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~-~--~~lv 135 (320)
++...+|++||+-++... ....++..|.+. +.++.+|++|.|+|...-..-.....++|+..+++++... + .+++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 467899999999887763 345567888888 9999999999999987665555556679999999998533 2 4688
Q ss_pred EeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHH--HhHhhhccccCCch
Q 020916 136 GFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKAL--LSVATYKKLWFPSC 213 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 213 (320)
|||-||.+++.+|.++++ ++-+|.+++-........ ..+.+..+....+- +... .+....+..
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~-------------eRlg~~~l~~ike~Gfid~~-~rkG~y~~r 175 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGIN-------------ERLGEDYLERIKEQGFIDVG-PRKGKYGYR 175 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcccccchhcchh-------------hhhcccHHHHHHhCCceecC-cccCCcCce
Confidence 999999999999999987 777776665442211110 00111111111000 0000 000001111
Q ss_pred hHHHHHHHHhcChhhHHHHhhhhhccCCCCCCC--CCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 214 LYKDFLEVMFANRKERAELLEGLLISNKDPTVP--NFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
+..+-+.. . ...+...... ..+||||-+||..|.++|.+.+..+++.++ +.++.++||+.|.
T Consensus 176 vt~eSlmd-------------r-Lntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~--nH~L~iIEgADHn 239 (269)
T KOG4667|consen 176 VTEESLMD-------------R-LNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP--NHKLEIIEGADHN 239 (269)
T ss_pred ecHHHHHH-------------H-HhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc--CCceEEecCCCcC
Confidence 11111110 0 0111111222 247999999999999999999999999999 7999999999998
Q ss_pred cccCChHHHHHHHHHHHH
Q 020916 292 VHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~ 309 (320)
.... ..+.......|..
T Consensus 240 yt~~-q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 240 YTGH-QSQLVSLGLEFIK 256 (269)
T ss_pred ccch-hhhHhhhcceeEE
Confidence 6543 3344445555543
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-17 Score=131.45 Aligned_cols=185 Identities=16% Similarity=0.183 Sum_probs=112.9
Q ss_pred CCCeEEEEcCCCCCccccHHHH--HHHhhc-c-ceEEecCC--CCCCCCCCCC--------------------CCCCh-h
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ--VGALTK-K-YSVYIPDL--LFFGGSITDE--------------------ADRSP-T 114 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~--~~~l~~-~-~~vi~~d~--~G~G~s~~~~--------------------~~~~~-~ 114 (320)
+.|+|+++||++++.. .|... +..+.. . +.|+++|. +|+|.+.... ..+.. .
T Consensus 41 ~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 5799999999999888 77542 344543 3 99999998 5555332100 01122 2
Q ss_pred HHHHHHHHHHHH---hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcC
Q 020916 115 FQAQCLATGLAK---LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPN 191 (320)
Q Consensus 115 ~~~~~l~~~l~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
..++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++....... ..
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~-------------------~~ 180 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRC-------------------PW 180 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccC-------------------cc
Confidence 345777777776 35568999999999999999999999999999998877532100 00
Q ss_pred cHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCH-HHHHH
Q 020916 192 SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNV-ELAHN 270 (320)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~~ 270 (320)
....+...+ .. +...... . ....... .. ....|+++.+|+.|+.++. .....
T Consensus 181 ~~~~~~~~l----~~----~~~~~~~------~---~~~~~~~---------~~-~~~~plli~~G~~D~~v~~~~~~~~ 233 (275)
T TIGR02821 181 GQKAFSAYL----GA----DEAAWRS------Y---DASLLVA---------DG-GRHSTILIDQGTADQFLDEQLRPDA 233 (275)
T ss_pred hHHHHHHHh----cc----cccchhh------c---chHHHHh---------hc-ccCCCeeEeecCCCcccCccccHHH
Confidence 000001100 00 0000000 0 0000000 01 2356899999999999997 34444
Q ss_pred HHHHhC--CCCeEEEEecCCCcccc
Q 020916 271 MKEQLG--ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 271 ~~~~~~--~~~~~~~~~~~~gH~~~ 293 (320)
+.+.+. +..+++.+++|++|.+.
T Consensus 234 ~~~~l~~~g~~v~~~~~~g~~H~f~ 258 (275)
T TIGR02821 234 FEQACRAAGQALTLRRQAGYDHSYY 258 (275)
T ss_pred HHHHHHHcCCCeEEEEeCCCCccch
Confidence 444443 24688999999999865
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=133.57 Aligned_cols=241 Identities=16% Similarity=0.106 Sum_probs=133.3
Q ss_pred HhcCCCceEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEE
Q 020916 17 KMAGVQPHAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVY 94 (320)
Q Consensus 17 ~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi 94 (320)
+..+...+.++++ .|.+|..+..-++. .++.|+||++.|+-+.....|..+.+.|... +.++
T Consensus 159 ~l~~~~i~~v~iP~eg~~I~g~LhlP~~----------------~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~L 222 (411)
T PF06500_consen 159 KLSDYPIEEVEIPFEGKTIPGYLHLPSG----------------EKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAML 222 (411)
T ss_dssp HHSSSEEEEEEEEETTCEEEEEEEESSS----------------SS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEE
T ss_pred HhCCCCcEEEEEeeCCcEEEEEEEcCCC----------------CCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEE
Confidence 3345445555554 56777776655431 2356788888888777763455555678766 9999
Q ss_pred ecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 95 IPDLLFFGGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 95 ~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
++|.||.|.|.......+.+.+...+.+.+... +..++.++|.|+||++|.++|..+++|++++|..+++....-..
T Consensus 223 tvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~ 302 (411)
T PF06500_consen 223 TVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD 302 (411)
T ss_dssp EE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-
T ss_pred EEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc
Confidence 999999999865432233344455555555544 34589999999999999999999889999999999875321100
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC--CCC--CC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD--PTV--PN 247 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~ 247 (320)
. ... ...|......+...+.........+...+...... ..+ .+
T Consensus 303 ~-~~~-------------------------------~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr 350 (411)
T PF06500_consen 303 P-EWQ-------------------------------QRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRR 350 (411)
T ss_dssp H-HHH-------------------------------TTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-
T ss_pred H-HHH-------------------------------hcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCC
Confidence 0 000 00111111111111111111122222222222221 233 67
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCC-cccccCChHHHHHHHHHHHHhh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAG-HLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~i~~fl~~~ 311 (320)
..+|+|.+.|++|+++|.+..+-++..-. +.+...++... |.- -+.-...+.+||+..
T Consensus 351 ~~~plL~i~~~~D~v~P~eD~~lia~~s~--~gk~~~~~~~~~~~g----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 351 CPTPLLAINGEDDPVSPIEDSRLIAESST--DGKALRIPSKPLHMG----YPQALDEIYKWLEDK 409 (411)
T ss_dssp BSS-EEEEEETT-SSS-HHHHHHHHHTBT--T-EEEEE-SSSHHHH----HHHHHHHHHHHHHHH
T ss_pred CCcceEEeecCCCCCCCHHHHHHHHhcCC--CCceeecCCCccccc----hHHHHHHHHHHHHHh
Confidence 88999999999999999999988888765 77888887544 332 235566777787653
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-17 Score=131.28 Aligned_cols=104 Identities=20% Similarity=0.304 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-------hCCCcE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-------LGVDKC 132 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-------~~~~~~ 132 (320)
+..|+|||+||++.+.. .|..+++.|+++ |.|+++|++|++.+.......+.....+.+.+.++. .+.+++
T Consensus 50 g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v 128 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKL 128 (313)
T ss_pred CCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhhe
Confidence 46799999999999988 999999999988 999999999875432111001111122222222222 234679
Q ss_pred EEEEeChhHHHHHHHHHhCcc-----ccccEEEecccc
Q 020916 133 VLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSIL 165 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~ 165 (320)
+++|||+||.+++.+|..+++ +++++|++++..
T Consensus 129 ~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 129 ALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred EEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 999999999999999998874 578889888764
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.9e-18 Score=129.80 Aligned_cols=193 Identities=17% Similarity=0.238 Sum_probs=119.2
Q ss_pred cHHHHHHHhhcc-ceEEecCCCCCCCCCCCC----CCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHH
Q 020916 79 TWQFQVGALTKK-YSVYIPDLLFFGGSITDE----ADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 79 ~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~----~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~ 147 (320)
.|......|++. |.|+.+|+||.+...... ....-...++|+.+.++.+ +.+++.++|+|+||.+++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 455667788777 999999999977432110 1112223466666666655 34689999999999999999
Q ss_pred HHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChh
Q 020916 148 AELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK 227 (320)
Q Consensus 148 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (320)
+.++|++++++|..++............. +.... .......+.. ...+ .
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-------------------~~~~~-~~~~~~~~~~---~~~~-~------- 130 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDI-------------------YTKAE-YLEYGDPWDN---PEFY-R------- 130 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCC-------------------HHHGH-HHHHSSTTTS---HHHH-H-------
T ss_pred hcccceeeeeeeccceecchhcccccccc-------------------ccccc-ccccCccchh---hhhh-h-------
Confidence 99999999999998887643221110000 00000 0000000000 0000 0
Q ss_pred hHHHHhhhhhccCCCCCCCC--CCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHH
Q 020916 228 ERAELLEGLLISNKDPTVPN--FPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNR 302 (320)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~ 302 (320)
....+. .+.+ +++|+|+++|++|..+|++.+..+.+.+. +.+++++++|++||.+.. +......+
T Consensus 131 ----~~s~~~------~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~ 200 (213)
T PF00326_consen 131 ----ELSPIS------PADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYE 200 (213)
T ss_dssp ----HHHHGG------GGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHH
T ss_pred ----hhcccc------ccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHH
Confidence 001100 1122 78999999999999999999888888775 346899999999996553 45567888
Q ss_pred HHHHHHHhhh
Q 020916 303 CLKQFLASLH 312 (320)
Q Consensus 303 ~i~~fl~~~~ 312 (320)
.+.+|+++..
T Consensus 201 ~~~~f~~~~l 210 (213)
T PF00326_consen 201 RILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999998764
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.8e-17 Score=124.80 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=136.0
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCC-cEEEEEeChhH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVD-KCVLVGFSYGG 141 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~lvGhS~Gg 141 (320)
++|+|+|+.+++.. .|..+++.|... +.|++++.+|.+.. .....+++++++...+.|.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~--~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDD--EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTT--SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCC--CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999 999999999997 99999999999822 234478999999988888877655 99999999999
Q ss_pred HHHHHHHHhC---ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHH
Q 020916 142 MVSFKVAELY---PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDF 218 (320)
Q Consensus 142 ~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (320)
.+|.++|.+. ...+..++++++.+........... . ....+...+........ ........
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~--~~~~~~~~ 141 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSRE--P------------SDEQFIEELRRIGGTPD--ASLEDEEL 141 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHH--C------------HHHHHHHHHHHHCHHHH--HHCHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhh--h------------hHHHHHHHHHHhcCCch--hhhcCHHH
Confidence 9999999764 3358999999976532211000000 0 00001111111100000 00000111
Q ss_pred HHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHH---HHHHHHHHhCCCCeEEEEecCCCcccccC
Q 020916 219 LEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE---LAHNMKEQLGADHVTFQGIKKAGHLVHLE 295 (320)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 295 (320)
................. .. ......-.+|.++.....|+..... ....+.+... ...+++.++| +|+.++.
T Consensus 142 ~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~-~~~~~~~v~G-~H~~~l~ 215 (229)
T PF00975_consen 142 LARLLRALRDDFQALEN---YS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTS-GDVEVHDVPG-DHFSMLK 215 (229)
T ss_dssp HHHHHHHHHHHHHHHHT---CS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBS-SSEEEEEESS-ETTGHHS
T ss_pred HHHHHHHHHHHHHHHhh---cc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcC-CCcEEEEEcC-CCcEecc
Confidence 11111111111111111 10 1111111467889999999887766 3334666665 5678899986 9998887
Q ss_pred -ChHHHHHHHHHHH
Q 020916 296 -RPCAYNRCLKQFL 308 (320)
Q Consensus 296 -~~~~~~~~i~~fl 308 (320)
+..++++.|.++|
T Consensus 216 ~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 216 PHVAEIAEKIAEWL 229 (229)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhccC
Confidence 7788888888875
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5e-16 Score=125.37 Aligned_cols=213 Identities=14% Similarity=0.056 Sum_probs=120.0
Q ss_pred CCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHH---HHHHHHHHHhCC--Cc
Q 020916 62 SKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQA---QCLATGLAKLGV--DK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~---~~l~~~l~~~~~--~~ 131 (320)
..|+||++||.+ ++.. .|..+++.|++. +.|+.+|+|.......+ ...++.. +.+.+..+.++. ++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~~p---~~~~D~~~a~~~l~~~~~~~~~d~~~ 155 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEARFP---QAIEEIVAVCCYFHQHAEDYGINMSR 155 (318)
T ss_pred CCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCCCC---CcHHHHHHHHHHHHHhHHHhCCChhH
Confidence 568999999977 4555 788888888874 99999999965433222 1233322 223333334443 58
Q ss_pred EEEEEeChhHHHHHHHHHhC------ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhh
Q 020916 132 CVLVGFSYGGMVSFKVAELY------PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATY 205 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (320)
++|+|+|+||.+++.++... +.++.+++++.+......... ..... .
T Consensus 156 i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s---~~~~~-----~------------------- 208 (318)
T PRK10162 156 IGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS---RRLLG-----G------------------- 208 (318)
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh---HHHhC-----C-------------------
Confidence 99999999999999998653 356889999887654211000 00000 0
Q ss_pred ccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEE
Q 020916 206 KKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQ 283 (320)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 283 (320)
....+.......+.+.+..+......-+... ....+..--.|+++++|+.|++.+ ....+.+.+. +..++++
T Consensus 209 ~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p----~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~ 282 (318)
T PRK10162 209 VWDGLTQQDLQMYEEAYLSNDADRESPYYCL----FNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFK 282 (318)
T ss_pred CccccCHHHHHHHHHHhCCCccccCCcccCc----chhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEE
Confidence 0000111111122222211110000000000 001121122489999999999864 4555555553 3468999
Q ss_pred EecCCCcccccC-----ChHHHHHHHHHHHHhh
Q 020916 284 GIKKAGHLVHLE-----RPCAYNRCLKQFLASL 311 (320)
Q Consensus 284 ~~~~~gH~~~~~-----~~~~~~~~i~~fl~~~ 311 (320)
+++|..|.+..- ..++..+.+.+||++.
T Consensus 283 ~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 283 LYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred EECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 999999976532 2345666777787654
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=122.17 Aligned_cols=178 Identities=20% Similarity=0.272 Sum_probs=107.2
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHH-Hhhcc-ceEEecCCCC------CCCC--CCCC----CC------CChhHHHHH
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVG-ALTKK-YSVYIPDLLF------FGGS--ITDE----AD------RSPTFQAQC 119 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~-~l~~~-~~vi~~d~~G------~G~s--~~~~----~~------~~~~~~~~~ 119 (320)
.+..++||++||+|.+.. .+..+.. .+... ..++.++-|. .|.. ..-. .. ..+...++.
T Consensus 11 ~~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp ST-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 357899999999999987 7776665 22222 6777765442 1220 1100 00 112223344
Q ss_pred HHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHH
Q 020916 120 LATGLAKL-----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVK 194 (320)
Q Consensus 120 l~~~l~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
+.++++.. ..++++|+|+|+||.+++.++.++|+.+.++|.+++.........
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~---------------------- 147 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE---------------------- 147 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH----------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc----------------------
Confidence 55555432 346799999999999999999999999999999997653211000
Q ss_pred HHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHH
Q 020916 195 GLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQ 274 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 274 (320)
....... +.|++++||.+|+++|.+..+...+.
T Consensus 148 ---------------------------------------------~~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~ 180 (216)
T PF02230_consen 148 ---------------------------------------------DRPEALA--KTPILIIHGDEDPVVPFEWAEKTAEF 180 (216)
T ss_dssp ---------------------------------------------CCHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccC--CCcEEEEecCCCCcccHHHHHHHHHH
Confidence 0000111 67999999999999999988887777
Q ss_pred hC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 275 LG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 275 ~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+. ..+++++.++|.||... .+..+.+.+||++.
T Consensus 181 L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 181 LKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 75 23689999999999875 44556688888764
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.5e-16 Score=124.13 Aligned_cols=229 Identities=16% Similarity=0.069 Sum_probs=128.5
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCC-CCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSI-TDE 108 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~-~~~ 108 (320)
+|.+++.|...|.. ..++.|.||.+||.++... .|...+..-...+.|+.+|.||+|... ...
T Consensus 65 ~g~~V~g~l~~P~~---------------~~~~~Pavv~~hGyg~~~~-~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 65 DGSRVYGWLYRPKN---------------AKGKLPAVVQFHGYGGRSG-DPFDLLPWAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp GGEEEEEEEEEES----------------SSSSEEEEEEE--TT--GG-GHHHHHHHHHTT-EEEEE--TTTSSSS-B-S
T ss_pred CCCEEEEEEEecCC---------------CCCCcCEEEEecCCCCCCC-CcccccccccCCeEEEEecCCCCCCCCCCcc
Confidence 56777776665531 1246789999999999877 776666554455999999999999322 110
Q ss_pred -------C------CCC------hhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 109 -------A------DRS------PTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 109 -------~------~~~------~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
. ..+ ...+..|....++.+ +.+++.+.|.|+||.+++.+|+..+ +|++++...|
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP 207 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVP 207 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESE
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCC
Confidence 0 011 112334555555544 2357999999999999999999875 6999888877
Q ss_pred cccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCC
Q 020916 164 ILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDP 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (320)
...-... .+.... ...+-.....+.+..-.........+..+...+...
T Consensus 208 ~l~d~~~----------------------------~~~~~~---~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~n 256 (320)
T PF05448_consen 208 FLCDFRR----------------------------ALELRA---DEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVN 256 (320)
T ss_dssp SSSSHHH----------------------------HHHHT-----STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHH
T ss_pred Cccchhh----------------------------hhhcCC---ccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHH
Confidence 5421110 000000 000111122222211112222223333333334444
Q ss_pred CCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 244 TVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 244 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
-.+.|+||+++-.|-.|.++|+...-.....++ ..+++.+++..||.... +.-.+...+||.+
T Consensus 257 fA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~-~~K~l~vyp~~~He~~~---~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 257 FARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP-GPKELVVYPEYGHEYGP---EFQEDKQLNFLKE 319 (320)
T ss_dssp HGGG--SEEEEEEETT-SSS-HHHHHHHHCC---SSEEEEEETT--SSTTH---HHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEecCCCCCCchhHHHHHhccC-CCeeEEeccCcCCCchh---hHHHHHHHHHHhc
Confidence 567789999999999999999999999999998 67899999999996542 2226667777765
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-16 Score=119.14 Aligned_cols=104 Identities=13% Similarity=0.173 Sum_probs=72.2
Q ss_pred CCCCeEEEEcCCCCCccccHH---HHHHHhhcc-ceEEecCCCCCCCCCCCCCCC------ChhHHHHHHHHHHHHh---
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ---FQVGALTKK-YSVYIPDLLFFGGSITDEADR------SPTFQAQCLATGLAKL--- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~---~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~------~~~~~~~~l~~~l~~~--- 127 (320)
+..|+||++||.+++.. .+. .+...+.+. +.|+++|++|++.+......+ .......++..+++.+
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 46799999999998877 554 244444444 999999999987543211000 0011233333333332
Q ss_pred -C--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 128 -G--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 128 -~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+ .++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 2 3589999999999999999999999999998888765
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.6e-17 Score=131.56 Aligned_cols=106 Identities=18% Similarity=0.209 Sum_probs=83.7
Q ss_pred CCCCeEEEEcCCCCCcc-ccHHH-HHHHhh--c-cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CC
Q 020916 61 PSKPVVVLVHGFAAEGI-VTWQF-QVGALT--K-KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GV 129 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~-~~~~~-~~~~l~--~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~ 129 (320)
.++|++|+|||++++.. ..|.. +.+.|. . +++||++|++|+|.+..+........+++++.++++.+ +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 47899999999987542 15665 555553 2 49999999999998876544344456677777777765 36
Q ss_pred CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
++++||||||||.+|..++.+.|++|.++++++|..+
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 7999999999999999999999999999999999754
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.2e-16 Score=125.86 Aligned_cols=246 Identities=14% Similarity=0.087 Sum_probs=152.4
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGM 142 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ 142 (320)
+|+||++..+.+.....-+.+++.|-+.+.|+..|+..-+..+......+++++++.+.+++++++.+ ++++|+|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37999999998766633356777777789999999987766554556789999999999999999876 99999999999
Q ss_pred HHHHHHHhC-----ccccccEEEeccccccccc-cccccc---------ccccccc-------cccccCcCc--------
Q 020916 143 VSFKVAELY-----PNLVQAMVVSGSILAMTDS-INETNL---------NRLGVSS-------SSELLLPNS-------- 192 (320)
Q Consensus 143 ~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~-~~~~~~---------~~~~~~~-------~~~~~~~~~-------- 192 (320)
+++.+++.. |.+++++++++++..+... .....+ ....... ..+...+..
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 988776654 6679999999998876442 111110 0000000 000000000
Q ss_pred ------HHHHHHHHhHhhhccccCCchhHHHHHHHHhcC----hhhHHHHhhhhhc-----------cCCCCCCCCCC-C
Q 020916 193 ------VKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN----RKERAELLEGLLI-----------SNKDPTVPNFP-Q 250 (320)
Q Consensus 193 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----------~~~~~~~~~~~-~ 250 (320)
......++.... ............+.+.+... .....+++..+.. .....++.+|+ +
T Consensus 261 mnp~r~~~~~~~~~~~l~-~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLV-KGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred cCcchHHHHHHHHHHHHh-cCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 000111111100 00000001111111211111 1111122222211 12225677899 9
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHh---CCCCeEEEEecCCCcccccC---ChHHHHHHHHHHHHh
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQL---GADHVTFQGIKKAGHLVHLE---RPCAYNRCLKQFLAS 310 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~ 310 (320)
|+|.|.|+.|.++++.+++.+.+.. ++...+.++.+++||+-.+. ..+++.-.|.+||.+
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 9999999999999999999988874 54566677887899997754 457899999999975
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-16 Score=112.37 Aligned_cols=156 Identities=17% Similarity=0.215 Sum_probs=103.4
Q ss_pred EEEEcCCCCCccccHHHHH-HHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHH
Q 020916 66 VVLVHGFAAEGIVTWQFQV-GALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVS 144 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~~~-~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a 144 (320)
|+++||++++....|.... +.|...++|-.+++ ...+.+.+...+.+.+.... ++++|||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 6899999988765776655 55655577777776 12366777777777777664 579999999999999
Q ss_pred HHHH-HhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh
Q 020916 145 FKVA-ELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF 223 (320)
Q Consensus 145 ~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (320)
+.++ .....+|.+++|++++.............
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~---------------------------------------------- 103 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELD---------------------------------------------- 103 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGC----------------------------------------------
T ss_pred HHHHhhcccccccEEEEEcCCCcccccchhhhcc----------------------------------------------
Confidence 9999 66778999999999875310000000000
Q ss_pred cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 224 ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.........+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+.-.+.
T Consensus 104 ---------------~f~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l---~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 104 ---------------GFTPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL---GAELIILGGGGHFNAASG 158 (171)
T ss_dssp ---------------CCTTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH---T-EEEEETS-TTSSGGGT
T ss_pred ---------------ccccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc---CCCeEECCCCCCcccccC
Confidence 0000012234566799999999999999999999999 689999999999976543
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5e-16 Score=114.87 Aligned_cols=174 Identities=20% Similarity=0.302 Sum_probs=119.2
Q ss_pred cCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCC--CCCCCC----CCCCCChhH-------HHHHHHHHHH
Q 020916 59 KKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLF--FGGSIT----DEADRSPTF-------QAQCLATGLA 125 (320)
Q Consensus 59 ~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G--~G~s~~----~~~~~~~~~-------~~~~l~~~l~ 125 (320)
+++..|+||++||+|++.. .+-++.+.+..++.++.+.-+- .|.-.. ....++.++ +++.+..+.+
T Consensus 14 ~~p~~~~iilLHG~Ggde~-~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDEL-DLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChh-hhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 3457789999999999988 7777777776667776654221 111100 011122222 3444445555
Q ss_pred HhCC--CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHh
Q 020916 126 KLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVA 203 (320)
Q Consensus 126 ~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (320)
..++ ++++++|+|.||++++.+..++|+.++++|++.+.......
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 5565 68999999999999999999999999999999987632210
Q ss_pred hhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeE
Q 020916 204 TYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVT 281 (320)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~ 281 (320)
..-..-..|+++++|+.|+++|.....++.+.+. ..+++
T Consensus 140 ---------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~ 180 (207)
T COG0400 140 ---------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVE 180 (207)
T ss_pred ---------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEE
Confidence 0011235689999999999999988888777765 35788
Q ss_pred EEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 282 FQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 282 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
...++ .||....+ -.+.+.+|+.+
T Consensus 181 ~~~~~-~GH~i~~e----~~~~~~~wl~~ 204 (207)
T COG0400 181 VRWHE-GGHEIPPE----ELEAARSWLAN 204 (207)
T ss_pred EEEec-CCCcCCHH----HHHHHHHHHHh
Confidence 88888 69987644 44455556654
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.9e-16 Score=117.94 Aligned_cols=177 Identities=23% Similarity=0.253 Sum_probs=114.3
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CC--C--------ChhHHHHHHHHHHHHhC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-AD--R--------SPTFQAQCLATGLAKLG 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~--~--------~~~~~~~~l~~~l~~~~ 128 (320)
++.|.||++|++.+-.. ..+.+++.|++. |.|+++|+-+-....... .. . ..+...+++.+.++.+.
T Consensus 12 ~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 36799999999988776 788899999998 999999986443311111 00 0 12344566666666652
Q ss_pred ------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhH
Q 020916 129 ------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSV 202 (320)
Q Consensus 129 ------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (320)
.+++.++|+|+||.+++.++.+. +.++++|..-+......
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~--------------------------------- 136 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPP--------------------------------- 136 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGG---------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCc---------------------------------
Confidence 35799999999999999999887 57888887766110000
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCe
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHV 280 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~ 280 (320)
. . ....++++|+++++|++|+.++.+..+.+.+.+. +...
T Consensus 137 -----------~------------------~---------~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 178 (218)
T PF01738_consen 137 -----------P------------------L---------EDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDV 178 (218)
T ss_dssp -----------H------------------H---------HHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTE
T ss_pred -----------c------------------h---------hhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcE
Confidence 0 0 0134578899999999999999998888777772 3589
Q ss_pred EEEEecCCCcccccCCh--------HHHHHHHHHHHHh
Q 020916 281 TFQGIKKAGHLVHLERP--------CAYNRCLKQFLAS 310 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~ 310 (320)
++++++|++|.+..... ++..+.+.+||++
T Consensus 179 ~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 179 EVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp EEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred EEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999999998875321 3455566667654
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.4e-15 Score=130.43 Aligned_cols=123 Identities=16% Similarity=0.119 Sum_probs=92.9
Q ss_pred EcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc--cH-HHHHHHhhcc-ceEEecCCCCCC
Q 020916 27 EIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV--TW-QFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 27 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~--~~-~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
...||.+|++..+.+.. .++.|+||++||++.+... .+ ......|.++ |.|+++|+||+|
T Consensus 2 ~~~DG~~L~~~~~~P~~----------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g 65 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG----------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRG 65 (550)
T ss_pred cCCCCCEEEEEEEecCC----------------CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccc
Confidence 45689999886665421 1367899999999876420 12 2234566666 999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
.|........ ...++|+.++++.+. .+++.++|||+||.+++.+|..+|++++++|..++...
T Consensus 66 ~S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 66 ASEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred cCCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 9987654333 456788888888763 25899999999999999999999999999998877654
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.8e-15 Score=104.51 Aligned_cols=169 Identities=19% Similarity=0.276 Sum_probs=119.9
Q ss_pred CCCCeEEEEcCCC-----CCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC---CC-
Q 020916 61 PSKPVVVLVHGFA-----AEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG---VD- 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~-----~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~---~~- 130 (320)
+..|..|++|.-+ .+.. .-..++..|.+. |.++.+|+||.|.|...... ...+ .+|..++++.+. ..
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nk-vv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~-GiGE-~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNK-VVQTLARALVKRGFATLRFNFRGVGRSQGEFDN-GIGE-LEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCCceEEecCCCccccCccCCH-HHHHHHHHHHhCCceEEeecccccccccCcccC-Ccch-HHHHHHHHHHHHhhCCCc
Confidence 4778889988643 2333 445667788888 99999999999999876533 2222 344445554442 22
Q ss_pred c-EEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 131 K-CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 131 ~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
+ ..+.|+|+|+.+++.+|.+.|+ ....+.+.++....
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~----------------------------------------- 140 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY----------------------------------------- 140 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch-----------------------------------------
Confidence 2 4678999999999999999876 45555555443100
Q ss_pred CCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCC
Q 020916 210 FPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAG 289 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 289 (320)
....+....+|.++|+|+.|.+++.....++.+.. ..+++++++++
T Consensus 141 -------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~---~~~~i~i~~a~ 186 (210)
T COG2945 141 -------------------------------DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI---KITVITIPGAD 186 (210)
T ss_pred -------------------------------hhhhccCCCCCceeEecChhhhhcHHHHHHhhcCC---CCceEEecCCC
Confidence 00023445678999999999999998888888763 67899999999
Q ss_pred cccccCChHHHHHHHHHHHH
Q 020916 290 HLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 290 H~~~~~~~~~~~~~i~~fl~ 309 (320)
||++-. -..+.+.|.+||.
T Consensus 187 HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 187 HFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred ceeccc-HHHHHHHHHHHhh
Confidence 997754 6678899999985
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.8e-15 Score=122.96 Aligned_cols=223 Identities=13% Similarity=0.033 Sum_probs=133.3
Q ss_pred CCCCeEEEEcCCCCCccccH-----HHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCC
Q 020916 61 PSKPVVVLVHGFAAEGIVTW-----QFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~ 130 (320)
..+.|||+++.+-.... .+ +.++++|.++ +.|+.+|+++-+... ...+++++++.+.+.++.+ +.+
T Consensus 213 v~~~PLLIVPp~INK~Y-IlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 213 QHARPLLVVPPQINKFY-IFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred cCCCcEEEechhhhhhh-eeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 35789999999985544 55 5688888888 999999999865543 4577888887777777765 567
Q ss_pred cEEEEEeChhHHHHHH----HHHhCcc-ccccEEEecccccccccccccccc-cccc-----cccccccCcC-----cHH
Q 020916 131 KCVLVGFSYGGMVSFK----VAELYPN-LVQAMVVSGSILAMTDSINETNLN-RLGV-----SSSSELLLPN-----SVK 194 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~----~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~-----~~~ 194 (320)
++.++|+|+||.+++. +++++++ +|++++++.++..+........+. .... ........+. .+.
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~ 368 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFA 368 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 8999999999999997 7788886 899999999988765322111110 0000 0000000000 000
Q ss_pred H------H-HHHHhHhhhccccCCchhHHHHHHHHhcCh-hhHHHHhhhhhc------------cCCCCCCCCCCCcEEE
Q 020916 195 G------L-KALLSVATYKKLWFPSCLYKDFLEVMFANR-KERAELLEGLLI------------SNKDPTVPNFPQRVHL 254 (320)
Q Consensus 195 ~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~P~l~ 254 (320)
. + ................+ ...+......-. .....++. +.. .....++.+|+||+++
T Consensus 369 ~LrP~dliw~y~v~~yllg~~p~~fd-ll~Wn~D~t~lPg~~~~e~l~-ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~ 446 (560)
T TIGR01839 369 WMRPNDLIWNYWVNNYLLGNEPPAFD-ILYWNNDTTRLPAAFHGDLLD-MFKSNPLTRPDALEVCGTPIDLKKVKCDSFS 446 (560)
T ss_pred hcCchhhhHHHHHHHhhcCCCcchhh-HHHHhCcCccchHHHHHHHHH-HHhcCCCCCCCCEEECCEEechhcCCCCeEE
Confidence 0 0 00000000000000000 111111110000 01111111 111 1222578889999999
Q ss_pred EecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 255 LWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 255 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
+.|..|.++|++.+..+.+.+. .+++++..+ +||.
T Consensus 447 va~~~DHIvPw~s~~~~~~l~g-s~~~fvl~~-gGHI 481 (560)
T TIGR01839 447 VAGTNDHITPWDAVYRSALLLG-GKRRFVLSN-SGHI 481 (560)
T ss_pred EecCcCCcCCHHHHHHHHHHcC-CCeEEEecC-CCcc
Confidence 9999999999999999999887 467777776 4885
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.7e-16 Score=124.75 Aligned_cols=105 Identities=20% Similarity=0.238 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCCCCc-cccHHHH-HHH-hhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CCCc
Q 020916 62 SKPVVVLVHGFAAEG-IVTWQFQ-VGA-LTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GVDK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~-~~~~~~~-~~~-l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~~ 131 (320)
++|++|+|||++++. . .|... .+. |... ++|+++|+++++.+..+....+....++++.++++.+ +.++
T Consensus 35 ~~p~vilIHG~~~~~~~-~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEE-SWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCC-cHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 789999999999887 4 66544 443 4444 9999999998843322222234444556666666654 3468
Q ss_pred EEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
+++||||+||.+|..++.++|++|.++++++|....
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 999999999999999999999999999999987643
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.5e-14 Score=106.38 Aligned_cols=177 Identities=22% Similarity=0.210 Sum_probs=132.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC-CCCCCCC-------C----CCChhHHHHHHHHHHHHhC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF-GGSITDE-------A----DRSPTFQAQCLATGLAKLG 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~-G~s~~~~-------~----~~~~~~~~~~l~~~l~~~~ 128 (320)
..|.||++|++.+-.. ..+..++.|+.. |.|+++|+-+. |.+.... . ..+......|+.+.++.+.
T Consensus 26 ~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~ 104 (236)
T COG0412 26 GFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLA 104 (236)
T ss_pred CCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHH
Confidence 4489999999998888 899999999999 99999998763 3332211 0 1223566778888887773
Q ss_pred ------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhH
Q 020916 129 ------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSV 202 (320)
Q Consensus 129 ------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (320)
.+++.++|+||||.+++.++...| .+++.+..-+......
T Consensus 105 ~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~--------------------------------- 150 (236)
T COG0412 105 RQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD--------------------------------- 150 (236)
T ss_pred hCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc---------------------------------
Confidence 457999999999999999999887 6888887665541100
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCC--Ce
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD--HV 280 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~ 280 (320)
.....++++|+|+..|+.|..+|......+.+.+... .+
T Consensus 151 ---------------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~ 191 (236)
T COG0412 151 ---------------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKV 191 (236)
T ss_pred ---------------------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCe
Confidence 0124678999999999999999999888888777623 67
Q ss_pred EEEEecCCCcccccCC-----------hHHHHHHHHHHHHhhh
Q 020916 281 TFQGIKKAGHLVHLER-----------PCAYNRCLKQFLASLH 312 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~-----------~~~~~~~i~~fl~~~~ 312 (320)
++.+++++.|.++.+. .+.-.+.+.+|+++..
T Consensus 192 ~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 192 DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 8999999989887432 2456677778887653
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-14 Score=106.49 Aligned_cols=229 Identities=15% Similarity=0.228 Sum_probs=120.4
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC-
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF- 101 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~- 101 (320)
+.+.++||..|++|...|....+ ...++||+.+|++.... .|..++.+|+.+ |+|+.+|...|
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~--------------~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~Hv 69 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEP--------------KRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHV 69 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS-----------------S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B--
T ss_pred ceeEcCCCCEEEEeccCCCCCCc--------------ccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccc
Confidence 56788899999999988754332 25689999999999988 999999999999 99999998877
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 102 GGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 102 G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|.|++.-..++++...+++..+++.+ +..++.|+.-|+.|.+|+..|.+- .+.-+|..-+......... .....
T Consensus 70 GlSsG~I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TLe-~al~~ 146 (294)
T PF02273_consen 70 GLSSGDINEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDTLE-KALGY 146 (294)
T ss_dssp -----------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHH-HHHSS
T ss_pred cCCCCChhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHHH-HHhcc
Confidence 99998888899999888988888776 567899999999999999999854 3666676655443211100 00000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
-........ .+... . +....+ -.+.|+...+ .......... ..+..+.+|++.+++
T Consensus 147 Dyl~~~i~~-lp~dl-------d---feGh~l---~~~vFv~dc~e~~w~~l~ST~---------~~~k~l~iP~iaF~A 203 (294)
T PF02273_consen 147 DYLQLPIEQ-LPEDL-------D---FEGHNL---GAEVFVTDCFEHGWDDLDSTI---------NDMKRLSIPFIAFTA 203 (294)
T ss_dssp -GGGS-GGG---SEE-------E---ETTEEE---EHHHHHHHHHHTT-SSHHHHH---------HHHTT--S-EEEEEE
T ss_pred chhhcchhh-CCCcc-------c---cccccc---chHHHHHHHHHcCCccchhHH---------HHHhhCCCCEEEEEe
Confidence 000000000 00000 0 000000 0111222211 1111111111 234677899999999
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 258 EDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
++|.++......++...+.+..+++..++|++|.+-
T Consensus 204 ~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 204 NDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp TT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred CCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 999999999999999988767889999999999865
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.4e-14 Score=110.22 Aligned_cols=129 Identities=21% Similarity=0.321 Sum_probs=104.5
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc--------c--
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK--------K-- 90 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--------~-- 90 (320)
+.....++ .|.++|+....++..+. ...-.|++++|||+++-+ .|-.+++.|.+ .
T Consensus 124 f~qykTeI-eGL~iHFlhvk~p~~k~-------------~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~ 188 (469)
T KOG2565|consen 124 FKQYKTEI-EGLKIHFLHVKPPQKKK-------------KKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYA 188 (469)
T ss_pred hhhhhhhh-cceeEEEEEecCCcccc-------------CCcccceEEecCCCchHH-HHHhhhhhhcCccccCCcccee
Confidence 44455667 59999997766643321 123458999999999999 88888887753 2
Q ss_pred ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccc
Q 020916 91 YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
|.||++.+||+|-|+.+. ...+....|.-+..++=.++..++.|-|-.||+.++..+|..+|++|.|+=+-.+.
T Consensus 189 FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred EEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 899999999999999877 45788888899999999999999999999999999999999999999887554433
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-15 Score=116.95 Aligned_cols=231 Identities=16% Similarity=0.095 Sum_probs=83.8
Q ss_pred CCCeEEEEcCCCCCcc--ccHHHHHHHhhcc-ceEEecCCC----CCCCCCCCCCCCChhHHHHHHHHHHHHh-------
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQFQVGALTKK-YSVYIPDLL----FFGGSITDEADRSPTFQAQCLATGLAKL------- 127 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~l~~~l~~~------- 127 (320)
....||||.|++..-. ++...+++.|.+. |.|+-+.++ |+|.+ +++.-++||.++++++
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-------SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-------SLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-------hhhhHHHHHHHHHHHHHHhhccc
Confidence 5668999999986443 3677888999765 999988765 45544 6777788888888765
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCc-----cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHh
Q 020916 128 -GVDKCVLVGFSYGGMVSFKVAELYP-----NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLS 201 (320)
Q Consensus 128 -~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (320)
+.++|+|+|||.|+.-+++++.... ..|+++||-+|.......... ... ...........++.+.
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~--~~~-------~~~~~~~v~~A~~~i~ 175 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNF--LGE-------REAYEELVALAKELIA 175 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTS--HHH----------HHHHHHHHHHHHH
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhc--ccc-------hHHHHHHHHHHHHHHH
Confidence 2458999999999999999997652 569999999987643211110 000 0000000011111110
Q ss_pred HhhhccccCC----------chhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHH
Q 020916 202 VATYKKLWFP----------SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHN 270 (320)
Q Consensus 202 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~ 270 (320)
..... ..++ ..+.....-..........-+-.++........+..+.+|+|++.+++|..+|... .+.
T Consensus 176 ~g~~~-~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~ 254 (303)
T PF08538_consen 176 EGKGD-EILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEA 254 (303)
T ss_dssp CT-TT--GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT----------
T ss_pred cCCCC-ceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccc
Confidence 00000 0000 00111101111111111111111221111223566778899999999999998754 233
Q ss_pred HHHHhC-CC-----CeEEEEecCCCcccccCCh----HHHHHHHHHHHH
Q 020916 271 MKEQLG-AD-----HVTFQGIKKAGHLVHLERP----CAYNRCLKQFLA 309 (320)
Q Consensus 271 ~~~~~~-~~-----~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 309 (320)
+.+++. .. .....++||++|.+--+.. +.+.+.|..||+
T Consensus 255 Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 255 LLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 444443 00 1224589999999875432 467888888874
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-14 Score=105.71 Aligned_cols=226 Identities=19% Similarity=0.188 Sum_probs=144.0
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC-
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE- 108 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~- 108 (320)
+|.+|..|..-+..+ ++..|.||-.||.++... .|..+...-...|.|+.+|.||.|.|....
T Consensus 65 ~g~rI~gwlvlP~~~---------------~~~~P~vV~fhGY~g~~g-~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~ 128 (321)
T COG3458 65 GGARIKGWLVLPRHE---------------KGKLPAVVQFHGYGGRGG-EWHDMLHWAVAGYAVFVMDVRGQGSSSQDTA 128 (321)
T ss_pred CCceEEEEEEeeccc---------------CCccceEEEEeeccCCCC-CccccccccccceeEEEEecccCCCccccCC
Confidence 567777766554322 256799999999999988 887777666666999999999999884311
Q ss_pred ---CC-----------------CChhHHHHHHHHHHH------HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEec
Q 020916 109 ---AD-----------------RSPTFQAQCLATGLA------KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSG 162 (320)
Q Consensus 109 ---~~-----------------~~~~~~~~~l~~~l~------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 162 (320)
.. +-......|+..+++ ..+.+++.+.|.|.||.+++.+++..| ++++++..-
T Consensus 129 ~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~ 207 (321)
T COG3458 129 DPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADY 207 (321)
T ss_pred CCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccc
Confidence 00 001112233333333 335678999999999999999988775 799988776
Q ss_pred ccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC
Q 020916 163 SILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD 242 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (320)
|...--+... .......... ...+.+ .........+..+...+..
T Consensus 208 Pfl~df~r~i-------------~~~~~~~yde-------------------i~~y~k---~h~~~e~~v~~TL~yfD~~ 252 (321)
T COG3458 208 PFLSDFPRAI-------------ELATEGPYDE-------------------IQTYFK---RHDPKEAEVFETLSYFDIV 252 (321)
T ss_pred cccccchhhe-------------eecccCcHHH-------------------HHHHHH---hcCchHHHHHHHHhhhhhh
Confidence 6542111100 0000000011 111111 1111133344444445555
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
....++++|+|+..|-.|+++|+...-..+..+. ..+++.+++.-+|.-. |.-..+.+..|+..+
T Consensus 253 n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~-~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 253 NLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALT-TSKTIEIYPYFAHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred hHHHhhccceEEeecccCCCCCChhhHHHhhccc-CCceEEEeeccccccC---cchhHHHHHHHHHhh
Confidence 5667899999999999999999999999999988 6778888886667644 433444556666554
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.2e-13 Score=121.82 Aligned_cols=221 Identities=13% Similarity=0.087 Sum_probs=133.6
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~ 99 (320)
+..++...||.+|.++....+... ..++.|+||++||..+.+. ..|......|..+ |.|+.++.|
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~-------------~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~R 483 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHF-------------RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVR 483 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCC-------------CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcC
Confidence 344455569999998443221110 1245699999999877653 3566555666666 999999999
Q ss_pred CCCCCCCC--------CCCCChhHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccc
Q 020916 100 FFGGSITD--------EADRSPTFQAQCLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTD 169 (320)
Q Consensus 100 G~G~s~~~--------~~~~~~~~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 169 (320)
|-|.-... ....+++++++.+..+++.= +.+++.+.|.|.||.++..++.++|++++++|...+......
T Consensus 484 Gs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 484 GGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVT 563 (686)
T ss_pred CCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhh
Confidence 86543321 12244555544444444331 346899999999999999999999999999998887764322
Q ss_pred cccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCC
Q 020916 170 SINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFP 249 (320)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (320)
...... .+.....+. .+.. +.. ......+.....-..+.+++
T Consensus 564 ~~~~~~-------------~p~~~~~~~------e~G~---p~~----------------~~~~~~l~~~SP~~~v~~~~ 605 (686)
T PRK10115 564 TMLDES-------------IPLTTGEFE------EWGN---PQD----------------PQYYEYMKSYSPYDNVTAQA 605 (686)
T ss_pred hcccCC-------------CCCChhHHH------HhCC---CCC----------------HHHHHHHHHcCchhccCccC
Confidence 110000 000000000 0000 000 00011111122333456678
Q ss_pred Cc-EEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe---cCCCcccc
Q 020916 250 QR-VHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI---KKAGHLVH 293 (320)
Q Consensus 250 ~P-~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~gH~~~ 293 (320)
.| +|+++|.+|.-||+..+.++...+. +...+.+++ +++||...
T Consensus 606 ~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 606 YPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred CCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 89 5677999999999999988888875 234566777 89999843
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.61 E-value=3e-13 Score=98.99 Aligned_cols=179 Identities=20% Similarity=0.239 Sum_probs=108.6
Q ss_pred EEEEcCCCCCccccHHH--HHHHhhcc---ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 66 VVLVHGFAAEGIVTWQF--QVGALTKK---YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~--~~~~l~~~---~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
|+++||+.++.. +... +.+.+.+. ..+.++|++ .......+.+.++++....+.+.|||.|+|
T Consensus 2 ilYlHGF~Ssp~-S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlG 69 (187)
T PF05728_consen 2 ILYLHGFNSSPQ-SFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLG 69 (187)
T ss_pred eEEecCCCCCCC-CHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChH
Confidence 799999999887 5543 34555543 567777765 345666788888998888777999999999
Q ss_pred HHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc-hhHHHHH
Q 020916 141 GMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS-CLYKDFL 219 (320)
Q Consensus 141 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 219 (320)
|..|..++.+++ +++ |+++|...+..... ..+...... .+-.. .+.....
T Consensus 70 G~~A~~La~~~~--~~a-vLiNPav~p~~~l~-------------------------~~iG~~~~~-~~~e~~~~~~~~~ 120 (187)
T PF05728_consen 70 GFYATYLAERYG--LPA-VLINPAVRPYELLQ-------------------------DYIGEQTNP-YTGESYELTEEHI 120 (187)
T ss_pred HHHHHHHHHHhC--CCE-EEEcCCCCHHHHHH-------------------------HhhCccccC-CCCccceechHhh
Confidence 999999999886 444 88998874322111 110000000 00000 0000000
Q ss_pred HHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH
Q 020916 220 EVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA 299 (320)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 299 (320)
.. ...+ ......-..+++++.++.|.+++...+.. .+. ++..++.+|++|-+. +-++
T Consensus 121 ~~-----------l~~l-----~~~~~~~~~~~lvll~~~DEvLd~~~a~~---~~~--~~~~~i~~ggdH~f~--~f~~ 177 (187)
T PF05728_consen 121 EE-----------LKAL-----EVPYPTNPERYLVLLQTGDEVLDYREAVA---KYR--GCAQIIEEGGDHSFQ--DFEE 177 (187)
T ss_pred hh-----------cceE-----eccccCCCccEEEEEecCCcccCHHHHHH---Hhc--CceEEEEeCCCCCCc--cHHH
Confidence 00 0000 00112234689999999999999854433 333 445556678899754 4566
Q ss_pred HHHHHHHHH
Q 020916 300 YNRCLKQFL 308 (320)
Q Consensus 300 ~~~~i~~fl 308 (320)
....|.+|+
T Consensus 178 ~l~~i~~f~ 186 (187)
T PF05728_consen 178 YLPQIIAFL 186 (187)
T ss_pred HHHHHHHhh
Confidence 777777775
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-13 Score=99.46 Aligned_cols=255 Identities=13% Similarity=0.052 Sum_probs=144.6
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCC-eEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKP-VVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
.+..+||..+....+.. ++..+ .|++-.+.+.... .|++++..+++. |.|+.+|+||.|
T Consensus 9 ~l~~~DG~~l~~~~~pA------------------~~~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g 69 (281)
T COG4757 9 HLPAPDGYSLPGQRFPA------------------DGKASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIG 69 (281)
T ss_pred ccccCCCccCccccccC------------------CCCCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEeccccc
Confidence 35566898888876654 12333 3444444455555 899999999988 999999999999
Q ss_pred CCCCCCCC---CChhHHH-HHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc-
Q 020916 103 GSITDEAD---RSPTFQA-QCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE- 173 (320)
Q Consensus 103 ~s~~~~~~---~~~~~~~-~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~- 173 (320)
.|...... +...+++ .|+.+.++.++ ..+...||||+||.+.-.+. +++ +..+....+...........
T Consensus 70 ~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~ 147 (281)
T COG4757 70 QSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLR 147 (281)
T ss_pred CCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhh
Confidence 99876533 4555554 36666665553 35799999999999765544 344 45555544444332221111
Q ss_pred cccccccccccccccCcCcHHHHHHHHhHhhhcc-ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcE
Q 020916 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK-LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRV 252 (320)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 252 (320)
..+..+...... ......+...+....... ..++....+++.+.......... .-......+....+++|+
T Consensus 148 ~~l~~~~l~~lv----~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fd----dp~~~~~~q~yaaVrtPi 219 (281)
T COG4757 148 ERLGAVLLWNLV----GPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFD----DPAMRNYRQVYAAVRTPI 219 (281)
T ss_pred hcccceeecccc----ccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcccccc----ChhHhHHHHHHHHhcCce
Confidence 000000000000 000111111111111111 12334444444443321110000 000000112345688999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC----CCcccccCCh-HHHHHHHHHHH
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK----AGHLVHLERP-CAYNRCLKQFL 308 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 308 (320)
..+...+|+.+|+...+.+.+...+...+...++. -||+-...++ |.+.+.+.+|+
T Consensus 220 ~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 220 TFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred eeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 99999999999999999999888744455555653 4999888777 77777777765
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-12 Score=88.46 Aligned_cols=181 Identities=15% Similarity=0.152 Sum_probs=126.1
Q ss_pred CCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCCC-----CCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEE
Q 020916 63 KPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLFF-----GGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVL 134 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~-----G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~l 134 (320)
.-+||+-||.+.+.. ......+..|+.. +.|..++++-. |...+++ ...-...+...+.++...+...++++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 348899999987655 2566778888888 99999998742 3222222 22334456677777777777779999
Q ss_pred EEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchh
Q 020916 135 VGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL 214 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
-|+||||.++..++......|+++++++-+...+.. ++.
T Consensus 94 GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK----------------------------------------Pe~- 132 (213)
T COG3571 94 GGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK----------------------------------------PEQ- 132 (213)
T ss_pred ccccccchHHHHHHHhhcCCcceEEEecCccCCCCC----------------------------------------ccc-
Confidence 999999999999998765569999988865533221 000
Q ss_pred HHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 215 YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
.....+..+++|++|.+|+.|++-..+....+. + +...+++.++++.|.+--
T Consensus 133 -------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~--l-s~~iev~wl~~adHDLkp 184 (213)
T COG3571 133 -------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA--L-SDPIEVVWLEDADHDLKP 184 (213)
T ss_pred -------------------------chhhhccCCCCCeEEeecccccccCHHHHHhhh--c-CCceEEEEeccCcccccc
Confidence 011257889999999999999997776652221 2 258999999999997542
Q ss_pred ----------CChHHHHHHHHHHHHhhh
Q 020916 295 ----------ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 295 ----------~~~~~~~~~i~~fl~~~~ 312 (320)
++-...++.|..|+.++.
T Consensus 185 ~k~vsgls~~~hL~~~A~~va~~~~~l~ 212 (213)
T COG3571 185 RKLVSGLSTADHLKTLAEQVAGWARRLA 212 (213)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhhcC
Confidence 233456777777777653
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.5e-14 Score=88.37 Aligned_cols=72 Identities=22% Similarity=0.202 Sum_probs=60.0
Q ss_pred EEEeeccCCC-CCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHH
Q 020916 53 IEKEALKKPS-KPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLA 125 (320)
Q Consensus 53 ~~~~~~~~~~-~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~ 125 (320)
+...|.++.+ +.+|+++||++.++. .|..+++.|++. |.|+++|+||||.|...... .+++++++|+..+++
T Consensus 5 ~~~~w~p~~~~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 5 FYRRWKPENPPKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEecCCCCCCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 3333334444 889999999999999 999999999999 99999999999999975543 688899999988764
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.7e-12 Score=89.07 Aligned_cols=173 Identities=17% Similarity=0.122 Sum_probs=115.8
Q ss_pred CeEEEEcCCCCCccccHHHHHH-HhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVG-ALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGM 142 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~-~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ 142 (320)
+.+|++||+.++....|....+ .|. .+-.+++. .......+++++.+.+.+... .++++||+||+|+.
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 5689999999887646654432 222 22222322 112246778888888877777 46799999999999
Q ss_pred HHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHH
Q 020916 143 VSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVM 222 (320)
Q Consensus 143 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (320)
+++.++.+....|.|++|++++-...+....... .
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~-------------------------------------------~-- 106 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL-------------------------------------------M-- 106 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCCccccccchhhc-------------------------------------------c--
Confidence 9999998877789999999987522110000000 0
Q ss_pred hcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc---CChHH
Q 020916 223 FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL---ERPCA 299 (320)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~ 299 (320)
.. .......+.-|.+++.+.+|++++++.++.+++.+. ..++.+..+||+--. ..-.+
T Consensus 107 ---------------tf-~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg---s~lv~~g~~GHiN~~sG~g~wpe 167 (181)
T COG3545 107 ---------------TF-DPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWG---SALVDVGEGGHINAESGFGPWPE 167 (181)
T ss_pred ---------------cc-CCCccccCCCceeEEEecCCCCCCHHHHHHHHHhcc---HhheecccccccchhhcCCCcHH
Confidence 00 001223445689999999999999999999999984 678888888997442 23345
Q ss_pred HHHHHHHHHHhh
Q 020916 300 YNRCLKQFLASL 311 (320)
Q Consensus 300 ~~~~i~~fl~~~ 311 (320)
....+.+|+.+.
T Consensus 168 g~~~l~~~~s~~ 179 (181)
T COG3545 168 GYALLAQLLSRA 179 (181)
T ss_pred HHHHHHHHhhhh
Confidence 666777776553
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.1e-12 Score=101.08 Aligned_cols=104 Identities=16% Similarity=0.126 Sum_probs=86.3
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhh----ccceEEecCCCCCCCCCCC------CCCCChhHHHHHHHHHHHHhC----
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALT----KKYSVYIPDLLFFGGSITD------EADRSPTFQAQCLATGLAKLG---- 128 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~----~~~~vi~~d~~G~G~s~~~------~~~~~~~~~~~~l~~~l~~~~---- 128 (320)
+..|||++|.+|-.. .|..+++.|. .++.|+++.+.||-.+... ...++++++++...++++.+-
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 467999999999999 9999887775 3499999999999877654 245889998887777776552
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCc---cccccEEEecccccc
Q 020916 129 --VDKCVLVGFSYGGMVSFKVAELYP---NLVQAMVVSGSILAM 167 (320)
Q Consensus 129 --~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 167 (320)
..+++|+|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 346999999999999999999998 689999999888643
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.2e-12 Score=125.94 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-DKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~G 140 (320)
++++++|+||++++.. .|..+.+.|...++|++++.+|+|.+. ...++++.+++++.+.++.+.. ++++++|||+|
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchH-HHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 4578999999999999 999999999888999999999998653 3457999999999999988654 48999999999
Q ss_pred HHHHHHHHHh---CccccccEEEecccc
Q 020916 141 GMVSFKVAEL---YPNLVQAMVVSGSIL 165 (320)
Q Consensus 141 g~~a~~~a~~---~p~~v~~lvl~~~~~ 165 (320)
|.+|.++|.+ .++++..++++++..
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999986 467899999988643
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.5e-12 Score=103.61 Aligned_cols=272 Identities=18% Similarity=0.138 Sum_probs=158.8
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH------HHHHhhcc-ce
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF------QVGALTKK-YS 92 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~------~~~~l~~~-~~ 92 (320)
..+.+.|++.||..|........ .+.+|+|++.||+.+++. .|-. ++=.|++. |.
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~-----------------~~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYD 108 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRG-----------------KKKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYD 108 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCC-----------------CCCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCc
Confidence 36788899999987777544431 158899999999999988 7743 34456777 99
Q ss_pred EEecCCCCCCCCCCCC----------CCCChhHHH-HHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc---c
Q 020916 93 VYIPDLLFFGGSITDE----------ADRSPTFQA-QCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN---L 154 (320)
Q Consensus 93 vi~~d~~G~G~s~~~~----------~~~~~~~~~-~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~---~ 154 (320)
|+.-+.||-..|..-. -++++.+++ -||-+.|+++ +.++++.+|||.|+.....++...|+ +
T Consensus 109 VWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~k 188 (403)
T KOG2624|consen 109 VWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKK 188 (403)
T ss_pred eeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhh
Confidence 9999999966554311 124555543 3666666554 66789999999999999999988765 7
Q ss_pred cccEEEecccccccc--cccccccccc------ccccccc-ccCcCcHHHHHHHHhHhhh--------------ccccCC
Q 020916 155 VQAMVVSGSILAMTD--SINETNLNRL------GVSSSSE-LLLPNSVKGLKALLSVATY--------------KKLWFP 211 (320)
Q Consensus 155 v~~lvl~~~~~~~~~--~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------~~~~~~ 211 (320)
|+..++++|...... .......... ....... .+.+. ....+.+...... ......
T Consensus 189 I~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~-~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~ 267 (403)
T KOG2624|consen 189 IKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPS-NLFIKKFARKICSGSKIFADLCSNFLFLLVGWN 267 (403)
T ss_pred hheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccch-hhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcc
Confidence 999999999874320 1000000000 0000000 01110 0000111110100 000000
Q ss_pred chhHHHH-----HHHHh--cChhhHHHHhhhh--------------------hccCCCCCCCCCCCcEEEEecCCCCCCC
Q 020916 212 SCLYKDF-----LEVMF--ANRKERAELLEGL--------------------LISNKDPTVPNFPQRVHLLWGEDDQIFN 264 (320)
Q Consensus 212 ~~~~~~~-----~~~~~--~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 264 (320)
....... ..... .+......+.+.. ........+.++++|+.+.+|++|..+.
T Consensus 268 ~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~ 347 (403)
T KOG2624|consen 268 SNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLAD 347 (403)
T ss_pred hHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCC
Confidence 0000000 00000 0001111111111 0111224667789999999999999999
Q ss_pred HHHHHHHHHHhCCCCeEEE---EecCCCcccc---cCChHHHHHHHHHHHHhhh
Q 020916 265 VELAHNMKEQLGADHVTFQ---GIKKAGHLVH---LERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~---~~~~~gH~~~---~~~~~~~~~~i~~fl~~~~ 312 (320)
++....+...++ +.... .+++-.|.-+ .+.++++.+.|.+.++...
T Consensus 348 ~~DV~~~~~~~~--~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 348 PEDVLILLLVLP--NSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHHHHHhcc--cccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 999998888777 33322 2788899765 3678999999999988765
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.9e-13 Score=101.04 Aligned_cols=190 Identities=15% Similarity=0.148 Sum_probs=100.8
Q ss_pred EEEEcCCCC---CccccHHHHHHHhhc-c-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHH----HH-----hCCCc
Q 020916 66 VVLVHGFAA---EGIVTWQFQVGALTK-K-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGL----AK-----LGVDK 131 (320)
Q Consensus 66 vv~lhG~~~---~~~~~~~~~~~~l~~-~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l----~~-----~~~~~ 131 (320)
||++||.+. +.. ....++..+++ . +.|+.+|+|=.. ........+|+.+.+ ++ .+.++
T Consensus 1 v~~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~~Yrl~p-------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE-SHWPFAARLAAERGFVVVSIDYRLAP-------EAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTT-THHHHHHHHHHHHTSEEEEEE---TT-------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChH-HHHHHHHHHHhhccEEEEEeeccccc-------cccccccccccccceeeeccccccccccccc
Confidence 799999874 333 45566666665 4 999999999321 223334444444444 33 23568
Q ss_pred EEEEEeChhHHHHHHHHHhCcc----ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPN----LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
++|+|+|.||.+++.++....+ .++++++++|.............. .......
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~-----------------------~~~~~~~ 129 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDD-----------------------SNENKDD 129 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHH-----------------------HHHHSTT
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccc-----------------------ccccccc
Confidence 9999999999999999976433 389999999865330000000000 0000000
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI 285 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~ 285 (320)
...+......+.+.+.............+.. ..+.. -.|+++++|+.|.++ +....+.+.+. +.+++++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~----~~~~~-~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~ 202 (211)
T PF07859_consen 130 PFLPAPKIDWFWKLYLPGSDRDDPLASPLNA----SDLKG-LPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVY 202 (211)
T ss_dssp SSSBHHHHHHHHHHHHSTGGTTSTTTSGGGS----SCCTT-CHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEE
T ss_pred ccccccccccccccccccccccccccccccc----ccccc-CCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEE
Confidence 1112222222222222111111111121111 01222 238999999999875 44555665554 347899999
Q ss_pred cCCCcccc
Q 020916 286 KKAGHLVH 293 (320)
Q Consensus 286 ~~~gH~~~ 293 (320)
+|.+|.+.
T Consensus 203 ~g~~H~f~ 210 (211)
T PF07859_consen 203 PGMPHGFF 210 (211)
T ss_dssp TTEETTGG
T ss_pred CCCeEEee
Confidence 99999765
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.6e-13 Score=117.60 Aligned_cols=89 Identities=20% Similarity=0.176 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCC---------C-C-------------CCChhHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITD---------E-A-------------DRSPTFQA 117 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~---------~-~-------------~~~~~~~~ 117 (320)
..|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|... . . ..++.+.+
T Consensus 448 g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v 526 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSI 526 (792)
T ss_pred CCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHH
Confidence 4579999999999999 999999999866 99999999999999443 1 1 12667888
Q ss_pred HHHHHHHHHhC----------------CCcEEEEEeChhHHHHHHHHHhC
Q 020916 118 QCLATGLAKLG----------------VDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 118 ~~l~~~l~~~~----------------~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.|+..+...++ ..+++++||||||.++..++...
T Consensus 527 ~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 527 LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 89888887776 24899999999999999999753
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.3e-11 Score=96.02 Aligned_cols=219 Identities=15% Similarity=0.088 Sum_probs=124.1
Q ss_pred CCCCeEEEEcCCCC-----CccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH------h
Q 020916 61 PSKPVVVLVHGFAA-----EGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK------L 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~-----~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~------~ 127 (320)
...|.||++||.|. ... .|..+...++.. ..|+++|+|=--+.. -+-..++-.+.+..+.++ .
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~-~y~~~~~~~a~~~~~vvvSVdYRLAPEh~---~Pa~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSP-AYDSFCTRLAAELNCVVVSVDYRLAPEHP---FPAAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCc-hhHHHHHHHHHHcCeEEEecCcccCCCCC---CCccchHHHHHHHHHHHhHHHHhCC
Confidence 46799999999873 234 788888888776 889999998332222 223444444555555543 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC------ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHh
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELY------PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLS 201 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (320)
+.++++|+|-|.||.+|..+|.+. +-++++.|++-|................... ..........++
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~------~~~~~~~~~~~w- 236 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS------PELARPKIDKWW- 236 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCC------cchhHHHHHHHH-
Confidence 567899999999999999998653 3468999999998765443322111111000 000011111111
Q ss_pred HhhhccccCCchhHHHHHHHHhcChh--hHHHHhhhhhccCCCCCCCCCCC-cEEEEecCCCCCCCHHHHHHHHHHhCC-
Q 020916 202 VATYKKLWFPSCLYKDFLEVMFANRK--ERAELLEGLLISNKDPTVPNFPQ-RVHLLWGEDDQIFNVELAHNMKEQLGA- 277 (320)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~- 277 (320)
.....+.. ....+...... ..........+ |++++.++.|.+. +....+.+++.+
T Consensus 237 ------------------~~~lP~~~~~~~~p~~np~~~-~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~ 295 (336)
T KOG1515|consen 237 ------------------RLLLPNGKTDLDHPFINPVGN-SLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKA 295 (336)
T ss_pred ------------------HHhCCCCCCCcCCcccccccc-ccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHc
Confidence 11100000 00011111110 11112223344 4999999999885 444555555542
Q ss_pred -CCeEEEEecCCCcccccCC-----hHHHHHHHHHHHHhh
Q 020916 278 -DHVTFQGIKKAGHLVHLER-----PCAYNRCLKQFLASL 311 (320)
Q Consensus 278 -~~~~~~~~~~~gH~~~~~~-----~~~~~~~i~~fl~~~ 311 (320)
..+++..++++.|.++.-. ..++.+.+.+|+++.
T Consensus 296 Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 296 GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 3456667899999877533 356777777887653
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.1e-12 Score=98.09 Aligned_cols=231 Identities=17% Similarity=0.187 Sum_probs=127.9
Q ss_pred CCCCeEEEEcCCCCCccccHH-HH-HHHhhcc-ceEEecCCCCCCCCCCCCCC----CChhHH----------HHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ-FQ-VGALTKK-YSVYIPDLLFFGGSITDEAD----RSPTFQ----------AQCLATG 123 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~-~~-~~~l~~~-~~vi~~d~~G~G~s~~~~~~----~~~~~~----------~~~l~~~ 123 (320)
+.+|.+|.++|.|.+.. ..+ .+ +..|.+. +..+.+..|-||...+.... .+..++ +..+..+
T Consensus 90 ~~rp~~IhLagTGDh~f-~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGF-WRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccch-hhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 46889999999998765 332 23 4555555 99999999999987654321 222222 2334444
Q ss_pred HHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHh
Q 020916 124 LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVA 203 (320)
Q Consensus 124 l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (320)
++..+..++.+.|.||||.+|...|...|..+..+-.+++........ ...+... -.+..+.+-+...
T Consensus 169 l~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt-~Gvls~~-----------i~W~~L~~q~~~~ 236 (348)
T PF09752_consen 169 LEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFT-EGVLSNS-----------INWDALEKQFEDT 236 (348)
T ss_pred HHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchh-hhhhhcC-----------CCHHHHHHHhccc
Confidence 555588899999999999999999999998766655555443211100 0000000 0000000000000
Q ss_pred hhcc--ccCCchhHHHHH--HHHhcChhhHHHHhhhhhccCCCCCCCCCC-----CcEEEEecCCCCCCCHHHHHHHHHH
Q 020916 204 TYKK--LWFPSCLYKDFL--EVMFANRKERAELLEGLLISNKDPTVPNFP-----QRVHLLWGEDDQIFNVELAHNMKEQ 274 (320)
Q Consensus 204 ~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~P~l~i~g~~D~~~~~~~~~~~~~~ 274 (320)
.+.. ...+........ ............+...+. +....+.++. -.+.++.+++|.++|.+....+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~m--d~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~ 314 (348)
T PF09752_consen 237 VYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVM--DSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEI 314 (348)
T ss_pred chhhhhcccccCcccccchhhccccchHHHHHHHHHHH--HhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHh
Confidence 0000 000000000000 000000011111111111 1111222222 2378999999999999999999999
Q ss_pred hCCCCeEEEEecCCCccc-ccCChHHHHHHHHHHHH
Q 020916 275 LGADHVTFQGIKKAGHLV-HLERPCAYNRCLKQFLA 309 (320)
Q Consensus 275 ~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~ 309 (320)
+| ++++..++| ||.. ++-+.+.+.+.|.+-++
T Consensus 315 WP--GsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 315 WP--GSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CC--CCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 99 999999987 9974 45677888888887664
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-11 Score=93.01 Aligned_cols=100 Identities=20% Similarity=0.240 Sum_probs=86.2
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEeChhHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGFSYGGM 142 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~Gg~ 142 (320)
|+++|+|+.++... .|..+...|.....|+.++.||.|.- .....+++++++...+.|..+. ..+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPLLPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccCceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 57999999999999 99999999999999999999999862 2345688899888888887775 46899999999999
Q ss_pred HHHHHHHhC---ccccccEEEeccccc
Q 020916 143 VSFKVAELY---PNLVQAMVVSGSILA 166 (320)
Q Consensus 143 ~a~~~a~~~---p~~v~~lvl~~~~~~ 166 (320)
+|..+|.+. .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999763 446999999999876
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.3e-12 Score=101.63 Aligned_cols=224 Identities=15% Similarity=0.130 Sum_probs=131.8
Q ss_pred CCCeEEEEcCCCCCccccH-----HHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHH-----HHHHHHHHHhCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTW-----QFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQA-----QCLATGLAKLGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~-----~~l~~~l~~~~~~ 130 (320)
-+++++++|.+-.... .| ..++..|.++ +.|+.+++++-..+.. ..++++++ +.+..+.+..+.+
T Consensus 106 ~~~PlLiVpP~iNk~y-i~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFY-ILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCcee-EEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 5679999999876554 44 3467778777 9999999987655543 34555554 4444455556778
Q ss_pred cEEEEEeChhHHHHHHHHHhCccc-cccEEEecccccccccccccccccc------cccccccccCcCcH-H--------
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNL-VQAMVVSGSILAMTDSINETNLNRL------GVSSSSELLLPNSV-K-------- 194 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~-------- 194 (320)
++.++|+|.||.++..+++.++.+ |++++++.+...+........+... ..........+... .
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrp 261 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRP 261 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCc
Confidence 999999999999999999988887 9999999888765443221111111 00000000000000 0
Q ss_pred ---HHHHHHhHhhhccccC--------------CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 195 ---GLKALLSVATYKKLWF--------------PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 195 ---~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
....+........... +......+++..+....... ..+......-++.+|+||++.+.|
T Consensus 262 ndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~---g~~~v~G~~VdL~~It~pvy~~a~ 338 (445)
T COG3243 262 NDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIR---GGLEVSGTMVDLGDITCPVYNLAA 338 (445)
T ss_pred cccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhc---cceEECCEEechhhcccceEEEee
Confidence 0001111111111111 11112222222111110000 111112233578889999999999
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 258 EDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
++|.++|.+......+.++ ..++++.. ++||....
T Consensus 339 ~~DhI~P~~Sv~~g~~l~~-g~~~f~l~-~sGHIa~v 373 (445)
T COG3243 339 EEDHIAPWSSVYLGARLLG-GEVTFVLS-RSGHIAGV 373 (445)
T ss_pred cccccCCHHHHHHHHHhcC-CceEEEEe-cCceEEEE
Confidence 9999999999999998888 34666666 57998654
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.1e-12 Score=94.58 Aligned_cols=104 Identities=28% Similarity=0.355 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH-H------hCCCcE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA-K------LGVDKC 132 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~-~------~~~~~~ 132 (320)
+.-|+|||+||+..... .|..++++++.+ |-|+++|+...+..............++.+.+-++ . .+..++
T Consensus 15 g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l 93 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKL 93 (259)
T ss_pred CCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccce
Confidence 57899999999997777 899999999999 99999996654332111111111111121111111 1 134589
Q ss_pred EEEEeChhHHHHHHHHHhC-----ccccccEEEecccc
Q 020916 133 VLVGFSYGGMVSFKVAELY-----PNLVQAMVVSGSIL 165 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 165 (320)
.|.|||-||-+|..++..+ +.+++++++++|.-
T Consensus 94 ~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 94 ALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred EEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 9999999999999999887 45899999999875
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2e-10 Score=84.72 Aligned_cols=245 Identities=12% Similarity=0.037 Sum_probs=146.9
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc----ceEEecCCCCCCCCC---CC------CCCCChhHHHHHHHHHHHHh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK----YSVYIPDLLFFGGSI---TD------EADRSPTFQAQCLATGLAKL 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~----~~vi~~d~~G~G~s~---~~------~~~~~~~~~~~~l~~~l~~~ 127 (320)
.+++.|++++|.++... .|..++..|-.. +.++.+...||-.-+ .. .+.++++++++.-.++++..
T Consensus 27 ~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 47889999999999999 999988877654 458888888886544 11 13377888888888888766
Q ss_pred C--CCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEeccccccccccc-ccccccc-c----cccccc-ccCcCcHHHH
Q 020916 128 G--VDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVSGSILAMTDSIN-ETNLNRL-G----VSSSSE-LLLPNSVKGL 196 (320)
Q Consensus 128 ~--~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~-~~~~~~~-~----~~~~~~-~~~~~~~~~~ 196 (320)
- ..+++++|||-|+++.+.++..... .|.+++++-|......... ...+... . ...... ..........
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 3 3579999999999999999874322 5788888777653211111 1111100 0 000011 1122222333
Q ss_pred HHHHhHhhhccccCCchhHHHHHHHHh----cChh-hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHH
Q 020916 197 KALLSVATYKKLWFPSCLYKDFLEVMF----ANRK-ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNM 271 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 271 (320)
+.++..........+.+.....+...- ++.- ...+-+..... .....+.+-.+-+.+.+|..|..+|.+....+
T Consensus 186 r~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~-~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~ 264 (301)
T KOG3975|consen 186 RFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT-RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYY 264 (301)
T ss_pred HHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH-hHHHHHHhcCcEEEEEccCCCCCcchHHHHHH
Confidence 334333333333334443322111100 0000 00000000000 00011222234588999999999999999999
Q ss_pred HHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 272 KEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 272 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
.+.++..++++-+ ++..|.+...+.+..+..+.+.+
T Consensus 265 kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 265 KDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred hhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 9999966677766 78999999998888888887765
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-10 Score=97.82 Aligned_cols=127 Identities=17% Similarity=0.179 Sum_probs=87.1
Q ss_pred eEEEcCC---CceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHH---------------
Q 020916 24 HAVEIEP---GTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVG--------------- 85 (320)
Q Consensus 24 ~~~~~~~---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~--------------- 85 (320)
.++.+++ +..|.||...... ...+.|+||+++|.++.+. .+..+.+
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~---------------~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~ 113 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRN---------------GNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYN 113 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCC---------------CCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeE
Confidence 3455532 4567777665421 1246799999999999887 5533321
Q ss_pred ---HhhccceEEecCCC-CCCCCCCCCC--CCChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 86 ---ALTKKYSVYIPDLL-FFGGSITDEA--DRSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 86 ---~l~~~~~vi~~d~~-G~G~s~~~~~--~~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
.+.+..+++.+|.| |+|.|..... ..+.++.++|+.++++.. +..+++|+|||+||.++..+|.+.-
T Consensus 114 n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 114 NTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred CCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 12334789999975 8888875433 245567788888888743 3478999999999999988886521
Q ss_pred ----------cccccEEEeccccc
Q 020916 153 ----------NLVQAMVVSGSILA 166 (320)
Q Consensus 153 ----------~~v~~lvl~~~~~~ 166 (320)
-.++|+++.++...
T Consensus 194 ~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 194 MGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred hhccccCCceeeeEEEEEeccccC
Confidence 13788888887654
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3e-11 Score=107.59 Aligned_cols=219 Identities=12% Similarity=0.051 Sum_probs=122.1
Q ss_pred HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--------------------CCcEEEEEeChhH
Q 020916 83 QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--------------------VDKCVLVGFSYGG 141 (320)
Q Consensus 83 ~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--------------------~~~~~lvGhS~Gg 141 (320)
+.+.|..+ |.|+..|.||.|.|......... ...+|..++|+.+. .++|.++|.|+||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~-~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDY-QEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCH-HHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 44667777 99999999999999876433333 34566666776664 3689999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhc-ccc-CCchhHHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK-KLW-FPSCLYKDFL 219 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~ 219 (320)
.+++.+|...|+.++++|..++........... +...............+.......... ..+ ......+...
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~-----G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~ 424 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYREN-----GLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLL 424 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcC-----CceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHH
Confidence 999999998888899999877664321111000 000000000000011011110000000 000 0001111111
Q ss_pred HHHhc----ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccc
Q 020916 220 EVMFA----NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 220 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~ 293 (320)
..+.. .......++ ...+....+.++++|+|+|+|..|..+++..+.++.+.+. +...++.+.+ .+|...
T Consensus 425 ~~~~~~~~~~~~~y~~fW---~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~ 500 (767)
T PRK05371 425 AELTAAQDRKTGDYNDFW---DDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYP 500 (767)
T ss_pred hhhhhhhhhcCCCccHHH---HhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCC
Confidence 11000 000001111 1112224567899999999999999999888777777764 1346666555 488654
Q ss_pred c-CChHHHHHHHHHHHHhh
Q 020916 294 L-ERPCAYNRCLKQFLASL 311 (320)
Q Consensus 294 ~-~~~~~~~~~i~~fl~~~ 311 (320)
. ..+.++.+.+.+|++..
T Consensus 501 ~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 501 NNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred CchhHHHHHHHHHHHHHhc
Confidence 3 34567777888888665
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.8e-12 Score=94.32 Aligned_cols=161 Identities=17% Similarity=0.160 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHH----HHhhc-cceEEecCCCC-----CCCCCC------------CC-----------
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQV----GALTK-KYSVYIPDLLF-----FGGSIT------------DE----------- 108 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~----~~l~~-~~~vi~~d~~G-----~G~s~~------------~~----------- 108 (320)
.++.||||||++.++. .++... ..|.+ .+..+.+|-|- -|-... +.
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 5789999999999999 887654 45555 57788877542 111100 00
Q ss_pred CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCc--------cccccEEEeccccccccccccccccccc
Q 020916 109 ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYP--------NLVQAMVVSGSILAMTDSINETNLNRLG 180 (320)
Q Consensus 109 ~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--------~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 180 (320)
....+++..+.+.+.++..+. -..|+|+|.||.+|..++.... ..++-+|++++.......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 012234445566666666552 3579999999999998885421 236778888766521110
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCC
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDD 260 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 260 (320)
+... ..-..+++|+|.|+|.+|
T Consensus 151 ----------------------------------------------------~~~~------~~~~~i~iPtlHv~G~~D 172 (212)
T PF03959_consen 151 ----------------------------------------------------YQEL------YDEPKISIPTLHVIGEND 172 (212)
T ss_dssp ----------------------------------------------------GTTT------T--TT---EEEEEEETT-
T ss_pred ----------------------------------------------------hhhh------hccccCCCCeEEEEeCCC
Confidence 0000 023567899999999999
Q ss_pred CCCCHHHHHHHHHHhCCCC-eEEEEecCCCcccccC
Q 020916 261 QIFNVELAHNMKEQLGADH-VTFQGIKKAGHLVHLE 295 (320)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~ 295 (320)
.+++++..+.+.+.+. + .+++..++ ||.+...
T Consensus 173 ~~~~~~~s~~L~~~~~--~~~~v~~h~g-GH~vP~~ 205 (212)
T PF03959_consen 173 PVVPPERSEALAEMFD--PDARVIEHDG-GHHVPRK 205 (212)
T ss_dssp SSS-HHHHHHHHHHHH--HHEEEEEESS-SSS----
T ss_pred CCcchHHHHHHHHhcc--CCcEEEEECC-CCcCcCC
Confidence 9999999999999987 5 77777765 9988755
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.5e-11 Score=97.51 Aligned_cols=123 Identities=19% Similarity=0.203 Sum_probs=81.3
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHH---H------HHhhcc-ceEEecCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQ---V------GALTKK-YSVYIPDLL 99 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~---~------~~l~~~-~~vi~~d~~ 99 (320)
||++|+..++.| ... ..++.|+||..|+++.+........ . ..|.++ |.|+..|.|
T Consensus 1 DGv~L~adv~~P-~~~-------------~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~R 66 (272)
T PF02129_consen 1 DGVRLAADVYRP-GAD-------------GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVR 66 (272)
T ss_dssp TS-EEEEEEEEE---T-------------TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-T
T ss_pred CCCEEEEEEEec-CCC-------------CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCc
Confidence 688888866655 111 2246789999999996542011111 1 126666 999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
|.|.|....... ....++|..++|+.+. ..+|.++|.|++|..++.+|...|..+++++...+....
T Consensus 67 G~g~S~G~~~~~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 67 GTGGSEGEFDPM-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp TSTTS-S-B-TT-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred ccccCCCccccC-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 999998765443 4445677777776662 247999999999999999999888889999988776543
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7e-11 Score=95.76 Aligned_cols=104 Identities=22% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCC---CccccHHHHHHHhhc-c-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH---hC--CC
Q 020916 61 PSKPVVVLVHGFAA---EGIVTWQFQVGALTK-K-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK---LG--VD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~-~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~---~~--~~ 130 (320)
...|+||++||.+. +.. ....++..+.. . +.|+.+|+|---+-. -...+++..+.+..+.++ ++ .+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~-~~~~~~~~~~~~~g~~vv~vdYrlaPe~~---~p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLR-THDALVARLAAAAGAVVVSVDYRLAPEHP---FPAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCCcEEEEEeCCeeeecChh-hhHHHHHHHHHHcCCEEEecCCCCCCCCC---CCchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 46899999999874 333 44345544444 4 999999999432221 122333333333333333 23 56
Q ss_pred cEEEEEeChhHHHHHHHHHhCcc----ccccEEEeccccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPN----LVQAMVVSGSILAMT 168 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~ 168 (320)
++.++|+|.||.+++.++..-.+ .....+++.|.....
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 79999999999999999876543 467888888876543
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.3e-11 Score=86.96 Aligned_cols=181 Identities=12% Similarity=0.074 Sum_probs=110.0
Q ss_pred CCCCCeEEEEcCCC---CCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHH----HHHHHHHHHHhC-CCc
Q 020916 60 KPSKPVVVLVHGFA---AEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ----AQCLATGLAKLG-VDK 131 (320)
Q Consensus 60 ~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~----~~~l~~~l~~~~-~~~ 131 (320)
+...+..||+||.- ++...+....-..+...|+|..+++ +.+.. ..+++.. ..-+.-+++... .+.
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q---~htL~qt~~~~~~gv~filk~~~n~k~ 137 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQ---VHTLEQTMTQFTHGVNFILKYTENTKV 137 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcc---cccHHHHHHHHHHHHHHHHHhccccee
Confidence 35789999999963 2222133333445555588888754 44432 2344443 344444455544 345
Q ss_pred EEEEEeChhHHHHHHHHHh-CccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 132 CVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+.+-|||.|+.+|..+..+ +..+|.++++.++......-........+ .+
T Consensus 138 l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dl-----------------------------gL 188 (270)
T KOG4627|consen 138 LTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDL-----------------------------GL 188 (270)
T ss_pred EEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcccccc-----------------------------Cc
Confidence 6677999999999988765 34589999998887632111000000000 00
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCc
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 290 (320)
.. +-.+. .. -....+..++.|+|++.|++|...-.++.+.+...+. .+.+..+++.+|
T Consensus 189 t~----~~ae~-----------~S-----cdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~--~a~~~~f~n~~h 246 (270)
T KOG4627|consen 189 TE----RNAES-----------VS-----CDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR--KASFTLFKNYDH 246 (270)
T ss_pred cc----chhhh-----------cC-----ccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh--hcceeecCCcch
Confidence 00 00000 00 0002346678899999999998777888999999988 899999999999
Q ss_pred ccccCCh
Q 020916 291 LVHLERP 297 (320)
Q Consensus 291 ~~~~~~~ 297 (320)
+-.+++.
T Consensus 247 y~I~~~~ 253 (270)
T KOG4627|consen 247 YDIIEET 253 (270)
T ss_pred hhHHHHh
Confidence 9776543
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.8e-11 Score=92.25 Aligned_cols=202 Identities=20% Similarity=0.220 Sum_probs=116.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhh-cc---ceEEec--CCCCC----CCC----CCCC------CC--CChhHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALT-KK---YSVYIP--DLLFF----GGS----ITDE------AD--RSPTFQAQC 119 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~-~~---~~vi~~--d~~G~----G~s----~~~~------~~--~~~~~~~~~ 119 (320)
...|.||+||++++.. .+..++..+. +. -.++.+ +.-|. |.= ..|- .. .+....++.
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 5678999999999999 9999999997 43 333333 33331 211 1110 11 245567778
Q ss_pred HHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEecccccccccccccccccccccccccccCc
Q 020916 120 LATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLP 190 (320)
Q Consensus 120 l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
+..++..| +++++-+|||||||..++.++..+.. .+..+|.++++.............. . +
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~----~----~-- 158 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQN----D----L-- 158 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT---------C--
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhh----h----h--
Confidence 88887776 57899999999999999999987532 5899999998875432211100000 0 0
Q ss_pred CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC------CCCCCC
Q 020916 191 NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE------DDQIFN 264 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~ 264 (320)
.... |.. .....+.+... . .. .++ -++.+|-|.|. .|..||
T Consensus 159 ---------------~~~g-p~~-~~~~y~~l~~~----------~-~~----~~p-~~i~VLnI~G~~~~g~~sDG~V~ 205 (255)
T PF06028_consen 159 ---------------NKNG-PKS-MTPMYQDLLKN----------R-RK----NFP-KNIQVLNIYGDLEDGSNSDGIVP 205 (255)
T ss_dssp ---------------STT--BSS---HHHHHHHHT----------H-GG----GST-TT-EEEEEEEESBTTCSBTSSSB
T ss_pred ---------------cccC-Ccc-cCHHHHHHHHH----------H-Hh----hCC-CCeEEEEEecccCCCCCCCeEEe
Confidence 0000 000 01111111100 0 00 111 13459999998 789999
Q ss_pred HHHHHHHHHHhCC--CCeEEEEecC--CCcccccCChHHHHHHHHHHH
Q 020916 265 VELAHNMKEQLGA--DHVTFQGIKK--AGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 265 ~~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl 308 (320)
...+..+...+.. ...+-.++.| +.|.-..+++ ++.+.|.+||
T Consensus 206 ~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 206 NASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp HHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 9988887777752 2455566654 6898888877 4778999887
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.7e-11 Score=86.34 Aligned_cols=175 Identities=18% Similarity=0.182 Sum_probs=117.8
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCC-CCCCCCC-CC-------CCCChhHHHHHHHHHHHHh---C
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLL-FFGGSIT-DE-------ADRSPTFQAQCLATGLAKL---G 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~-G~G~s~~-~~-------~~~~~~~~~~~l~~~l~~~---~ 128 (320)
++..||++--+.+.....-+..+..++.+ |.|+.||+- |--.|.. .. ...+....-.++..+++.+ +
T Consensus 38 ~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g 117 (242)
T KOG3043|consen 38 SKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG 117 (242)
T ss_pred CCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC
Confidence 34566666665554442467788888888 999999974 3111111 00 1122333345555555544 4
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 129 -VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 129 -~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
..++.++|.+|||.++..+....| .+.+++..-|....
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d---------------------------------------- 156 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD---------------------------------------- 156 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC----------------------------------------
Confidence 567999999999999999988877 57777766654310
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC---CCCeEEEE
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG---ADHVTFQG 284 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~ 284 (320)
......+++|++++.|+.|..+|+.....+.+.+. ....++.+
T Consensus 157 ----------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~ 202 (242)
T KOG3043|consen 157 ----------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKT 202 (242)
T ss_pred ----------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEE
Confidence 01356778999999999999999999888888876 22346999
Q ss_pred ecCCCccccc-----CCh------HHHHHHHHHHHHhh
Q 020916 285 IKKAGHLVHL-----ERP------CAYNRCLKQFLASL 311 (320)
Q Consensus 285 ~~~~gH~~~~-----~~~------~~~~~~i~~fl~~~ 311 (320)
++|.+|.+.. +.| |+..+.+.+|+++.
T Consensus 203 f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 203 FSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred cCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 9999998763 233 45566666777654
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-10 Score=83.88 Aligned_cols=176 Identities=19% Similarity=0.202 Sum_probs=111.2
Q ss_pred CCCeEEEEcCCCCCccccHHHHH----HHhhccceEEecCCCC----CCCCC---------CCC----------------
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQV----GALTKKYSVYIPDLLF----FGGSI---------TDE---------------- 108 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~----~~l~~~~~vi~~d~~G----~G~s~---------~~~---------------- 108 (320)
.++.|||+||+-.+.. .|..-. ..|.+.+..+.+|-|- -+.+. .+.
T Consensus 4 ~k~rvLcLHGfrQsg~-~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGK-VFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccH-HHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 5788999999999888 775433 3344447777777662 01110 000
Q ss_pred -CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCc------c--ccccEEEeccccccccccccccccc
Q 020916 109 -ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYP------N--LVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 109 -~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p------~--~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
.....+...+.+.+.+...| | -.|+|.|.|+.++..++.... + .++-+|++++.......
T Consensus 83 ~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-------- 152 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-------- 152 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--------
Confidence 00122333455555555554 4 468999999999999987211 1 24555555544311000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE 258 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 258 (320)
.......+.+++|.|-|.|+
T Consensus 153 ------------------------------------------------------------~~~~~~~~~i~~PSLHi~G~ 172 (230)
T KOG2551|consen 153 ------------------------------------------------------------LDESAYKRPLSTPSLHIFGE 172 (230)
T ss_pred ------------------------------------------------------------hhhhhhccCCCCCeeEEecc
Confidence 00001346789999999999
Q ss_pred CCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 259 DDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 259 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.|.++|...+..+++.+. +..+..-+ +||++.... ...+.|.+|+.....
T Consensus 173 ~D~iv~~~~s~~L~~~~~--~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 173 TDTIVPSERSEQLAESFK--DATVLEHP-GGHIVPNKA--KYKEKIADFIQSFLQ 222 (230)
T ss_pred cceeecchHHHHHHHhcC--CCeEEecC-CCccCCCch--HHHHHHHHHHHHHHH
Confidence 999999999999999998 66655555 599987654 556666677666543
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1e-10 Score=87.14 Aligned_cols=103 Identities=21% Similarity=0.344 Sum_probs=74.6
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCC---CChhHHHHHHHHHHHHh-------C
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEAD---RSPTFQAQCLATGLAKL-------G 128 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~---~~~~~~~~~l~~~l~~~-------~ 128 (320)
.+.-|.|+|+||+.-..+ .|..++.+++.+ |-|+++++-..-. +... .+....++.+..-++++ +
T Consensus 43 ~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~n 118 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEAN 118 (307)
T ss_pred CCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCcccc
Confidence 467799999999999888 999999999999 9999999874211 1111 12222233333333332 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCc--cccccEEEeccccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYP--NLVQAMVVSGSILA 166 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~ 166 (320)
..++.++|||.||-.|..+|..+. -.++++|.++|...
T Consensus 119 l~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred cceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 468999999999999999998763 25889999998753
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.7e-10 Score=85.58 Aligned_cols=103 Identities=22% Similarity=0.322 Sum_probs=67.5
Q ss_pred CCCeEEEEcCCCCCccccHHHH--HHHhhcc--ceEEecCCCCCCCCCCC---------CCCCChhHHHHHHHHHHHHhC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ--VGALTKK--YSVYIPDLLFFGGSITD---------EADRSPTFQAQCLATGLAKLG 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~--~~~l~~~--~~vi~~d~~G~G~s~~~---------~~~~~~~~~~~~l~~~l~~~~ 128 (320)
+.|.||++||.+.+.. .+... ...|++. |-|+.++.......... ........++..+..+..+.+
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 5689999999999887 65442 2456665 88888885421111100 001112222233333333433
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 129 --VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 --~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
..+|++.|+|.||.++..++..+|+.+.++...++..
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 4579999999999999999999999999988877665
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.5e-11 Score=90.53 Aligned_cols=102 Identities=20% Similarity=0.190 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhh--------c-cceEEecCCCCCCCCCCCCCCCChhH----HHHHHHHHHHHh-
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALT--------K-KYSVYIPDLLFFGGSITDEADRSPTF----QAQCLATGLAKL- 127 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~--------~-~~~vi~~d~~G~G~s~~~~~~~~~~~----~~~~l~~~l~~~- 127 (320)
++.+||||||.+++.. .++.+...+. . .++++++|+......-. ...+.. ..+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~---g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH---GRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc---cccHHHHHHHHHHHHHHHHHhhh
Confidence 6889999999999888 8877775552 1 27899999875422211 122223 333444444444
Q ss_pred ----CCCcEEEEEeChhHHHHHHHHHhCc---cccccEEEecccccc
Q 020916 128 ----GVDKCVLVGFSYGGMVSFKVAELYP---NLVQAMVVSGSILAM 167 (320)
Q Consensus 128 ----~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 167 (320)
..++++||||||||.+|..++...+ +.|+.+|.++++...
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 4568999999999999998886543 479999999987643
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.3e-10 Score=99.07 Aligned_cols=231 Identities=19% Similarity=0.171 Sum_probs=146.7
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc------ccHHHHHHHhhcc-c
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI------VTWQFQVGALTKK-Y 91 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~------~~~~~~~~~l~~~-~ 91 (320)
.-.+...+.. ||....+...-|+.-++. +.-|.+|.+||.+++.. ..|..+ ..... +
T Consensus 496 p~~~~~~i~~-~~~~~~~~~~lP~~~~~~-------------~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~ 559 (755)
T KOG2100|consen 496 PIVEFGKIEI-DGITANAILILPPNFDPS-------------KKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGF 559 (755)
T ss_pred CcceeEEEEe-ccEEEEEEEecCCCCCCC-------------CCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCe
Confidence 3456677777 899999977766443322 35688899999986322 133332 23444 9
Q ss_pred eEEecCCCCCCCCCCCC--------CCCChhHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCccc-cccEEE
Q 020916 92 SVYIPDLLFFGGSITDE--------ADRSPTFQAQCLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELYPNL-VQAMVV 160 (320)
Q Consensus 92 ~vi~~d~~G~G~s~~~~--------~~~~~~~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl 160 (320)
.|+.+|.||-|.....- ......++...+..+++.. +.+++.++|+|.||.+++..+...|+. ++..+.
T Consensus 560 ~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgva 639 (755)
T KOG2100|consen 560 AVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVA 639 (755)
T ss_pred EEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEE
Confidence 99999999987665331 2234455555555555543 456899999999999999999998855 455588
Q ss_pred ecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccC
Q 020916 161 SGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240 (320)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (320)
++|.....-......... ...+......+.+ ..
T Consensus 640 vaPVtd~~~yds~~tery-----------------------------mg~p~~~~~~y~e------------------~~ 672 (755)
T KOG2100|consen 640 VAPVTDWLYYDSTYTERY-----------------------------MGLPSENDKGYEE------------------SS 672 (755)
T ss_pred ecceeeeeeecccccHhh-----------------------------cCCCccccchhhh------------------cc
Confidence 888764321000000000 0001110100111 11
Q ss_pred CCCCCCCCCCcE-EEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCCh-HHHHHHHHHHHHhhh
Q 020916 241 KDPTVPNFPQRV-HLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERP-CAYNRCLKQFLASLH 312 (320)
Q Consensus 241 ~~~~~~~~~~P~-l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~~ 312 (320)
....+..++.|. |++||+.|..+..+.+..+.+.+. +-..+..++|+.+|.+..-.. ..+...+..|+..+-
T Consensus 673 ~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 673 VSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCF 748 (755)
T ss_pred ccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 122344455555 999999999999998888888876 335788999999999887443 678888889988543
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.7e-09 Score=77.61 Aligned_cols=169 Identities=11% Similarity=0.162 Sum_probs=94.8
Q ss_pred EEEEcCCCCCcccc--HHH-HHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-C---CCcEEEEEeC
Q 020916 66 VVLVHGFAAEGIVT--WQF-QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-G---VDKCVLVGFS 138 (320)
Q Consensus 66 vv~lhG~~~~~~~~--~~~-~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-~---~~~~~lvGhS 138 (320)
||++||+.+++. + ... ....+....+++ +++ ........+.+.+.+..+ . .+++.|||+|
T Consensus 2 IlYlHGF~SS~~-S~~~Ka~~l~~~~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSP-GNHEKVLQLQFIDPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCC-ccHHHHHhheeeCCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 799999999888 5 321 111221113333 221 123333344444554431 1 2579999999
Q ss_pred hhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHH
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDF 218 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (320)
+||..|..++.++. -..|+++|...+... +...+. ...... .+....
T Consensus 69 LGGyyA~~La~~~g---~~aVLiNPAv~P~~~-------------------------L~~~ig----~~~~y~-~~~~~h 115 (180)
T PRK04940 69 LGGYWAERIGFLCG---IRQVIFNPNLFPEEN-------------------------MEGKID----RPEEYA-DIATKC 115 (180)
T ss_pred hHHHHHHHHHHHHC---CCEEEECCCCChHHH-------------------------HHHHhC----CCcchh-hhhHHH
Confidence 99999999999986 367888988743211 000000 000000 111111
Q ss_pred HHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCe-EEEEecCCCcccccCCh
Q 020916 219 LEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV-TFQGIKKAGHLVHLERP 297 (320)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~ 297 (320)
+... . .+-.-..+++..+.|.+.+...+..... ++ +..+.+|++|-+ ++-
T Consensus 116 ~~eL--------------~--------~~~p~r~~vllq~gDEvLDyr~a~~~y~-----~~y~~~v~~GGdH~f--~~f 166 (180)
T PRK04940 116 VTNF--------------R--------EKNRDRCLVILSRNDEVLDSQRTAEELH-----PYYEIVWDEEQTHKF--KNI 166 (180)
T ss_pred HHHh--------------h--------hcCcccEEEEEeCCCcccCHHHHHHHhc-----cCceEEEECCCCCCC--CCH
Confidence 1111 0 0112236899999999998877665443 44 688888888864 345
Q ss_pred HHHHHHHHHHHH
Q 020916 298 CAYNRCLKQFLA 309 (320)
Q Consensus 298 ~~~~~~i~~fl~ 309 (320)
++....|.+|++
T Consensus 167 e~~l~~I~~F~~ 178 (180)
T PRK04940 167 SPHLQRIKAFKT 178 (180)
T ss_pred HHHHHHHHHHHh
Confidence 667778888874
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.6e-10 Score=81.74 Aligned_cols=176 Identities=19% Similarity=0.251 Sum_probs=113.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCC------------------CCCCCChhHHHHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSIT------------------DEADRSPTFQAQCLAT 122 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~------------------~~~~~~~~~~~~~l~~ 122 (320)
...+||++||.+.+.. .|..+++.|.-. ...|++.-|-.-.+.. +.........++.+..
T Consensus 2 h~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred ceEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 3468999999999999 999888887766 7778775542211110 0011223334556666
Q ss_pred HHHHh---C--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHH
Q 020916 123 GLAKL---G--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLK 197 (320)
Q Consensus 123 ~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (320)
++++. + ..++.+-|.|+||.+++..+..+|..+.+++-..+.........
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~------------------------- 135 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGL------------------------- 135 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhc-------------------------
Confidence 66654 2 34689999999999999999999877777776555432110000
Q ss_pred HHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC-
Q 020916 198 ALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG- 276 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~- 276 (320)
... ..... ..|++..||+.|+++|....+...+.+.
T Consensus 136 ------------------------------------~~~-----~~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~ 172 (206)
T KOG2112|consen 136 ------------------------------------PGW-----LPGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKS 172 (206)
T ss_pred ------------------------------------cCC-----ccccC--cchhheecccCCceeehHHHHHHHHHHHH
Confidence 000 00001 5689999999999999876555544443
Q ss_pred -CCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 277 -ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 277 -~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
...++++.++|.+|...-+.-+ .+..|+.+
T Consensus 173 ~~~~~~f~~y~g~~h~~~~~e~~----~~~~~~~~ 203 (206)
T KOG2112|consen 173 LGVRVTFKPYPGLGHSTSPQELD----DLKSWIKT 203 (206)
T ss_pred cCCceeeeecCCccccccHHHHH----HHHHHHHH
Confidence 1258899999999987644333 44455544
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.2e-10 Score=93.08 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCC-CCC--C------C---------------CC-C--
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGS-ITD--E------A---------------DR-S-- 112 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s-~~~--~------~---------------~~-~-- 112 (320)
+.-|+|||-||++++.. .|..++..|+.+ |-|+++|+|..-.+ ... . . .. .
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 36799999999999999 999999999999 99999999943111 000 0 0 00 0
Q ss_pred --------hhHHHHHHHHHHHHh--------------------------CCCcEEEEEeChhHHHHHHHHHhCccccccE
Q 020916 113 --------PTFQAQCLATGLAKL--------------------------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAM 158 (320)
Q Consensus 113 --------~~~~~~~l~~~l~~~--------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 158 (320)
++..++++..+++.+ +.+++.++|||+||..++..+... .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 001133444444332 134799999999999999988876 679999
Q ss_pred EEecccc
Q 020916 159 VVSGSIL 165 (320)
Q Consensus 159 vl~~~~~ 165 (320)
|++++..
T Consensus 256 I~LD~W~ 262 (379)
T PF03403_consen 256 ILLDPWM 262 (379)
T ss_dssp EEES---
T ss_pred EEeCCcc
Confidence 9999875
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-09 Score=82.90 Aligned_cols=95 Identities=22% Similarity=0.142 Sum_probs=70.6
Q ss_pred EEcCCC--CCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-hCCCcEEEEEeChhHHHH
Q 020916 68 LVHGFA--AEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-LGVDKCVLVGFSYGGMVS 144 (320)
Q Consensus 68 ~lhG~~--~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~lvGhS~Gg~~a 144 (320)
++|+.+ ++.. .|..+...|...+.|++++.+|++.+... ..+.+.+++.+...+.. ....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPH-EYARLAAALRGRRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHH-HHHHHHHhcCCCccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 455544 4556 89999999988899999999999876533 34566666655554443 345689999999999999
Q ss_pred HHHHHh---CccccccEEEecccc
Q 020916 145 FKVAEL---YPNLVQAMVVSGSIL 165 (320)
Q Consensus 145 ~~~a~~---~p~~v~~lvl~~~~~ 165 (320)
..++.+ .++.+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 998876 345688998887654
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.6e-10 Score=79.52 Aligned_cols=96 Identities=25% Similarity=0.219 Sum_probs=74.5
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeC
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFS 138 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS 138 (320)
..+||+-|=++-.. .=..+++.|+++ +.|+.+|-+-+=.+ ..+.++.+.|+..++++. +.++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~-----~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWS-----ERTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhh-----hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 35777777766555 556788999998 99999997644333 356778888888888665 56789999999
Q ss_pred hhHHHHHHHHHhCcc----ccccEEEecccc
Q 020916 139 YGGMVSFKVAELYPN----LVQAMVVSGSIL 165 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 165 (320)
+|+-+.-....+.|. +|+.++|+++..
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 999988888877764 688999998765
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.13 E-value=4e-10 Score=85.35 Aligned_cols=138 Identities=22% Similarity=0.319 Sum_probs=64.0
Q ss_pred CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
+++.|+|.|.||-+|+.+|..+| .|+++|.+++....................... .... .....
T Consensus 22 ~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~-----~~~~-------~~~~~-- 86 (213)
T PF08840_consen 22 DKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPF-----DISK-------FSWNE-- 86 (213)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B------GGG--------EE-T--
T ss_pred CCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCc-----Chhh-------ceecC--
Confidence 58999999999999999999998 699999999876543322111100000000000 0000 00000
Q ss_pred CCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhC----CCCeEEEE
Q 020916 210 FPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLG----ADHVTFQG 284 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~----~~~~~~~~ 284 (320)
+. ....... ......-......-.+.++++|+|+|.|++|...|... ++.+.+++. ..+.+++.
T Consensus 87 -~~---------~~~~~~~-~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~ 155 (213)
T PF08840_consen 87 -PG---------LLRSRYA-FELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLS 155 (213)
T ss_dssp -TS----------EE-TT--B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEE
T ss_pred -Cc---------ceehhhh-hhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEE
Confidence 00 0000000 00000000011123466789999999999999998755 344444443 12578899
Q ss_pred ecCCCcccc
Q 020916 285 IKKAGHLVH 293 (320)
Q Consensus 285 ~~~~gH~~~ 293 (320)
++++||++.
T Consensus 156 Y~~aGH~i~ 164 (213)
T PF08840_consen 156 YPGAGHLIE 164 (213)
T ss_dssp ETTB-S---
T ss_pred cCCCCceec
Confidence 999999853
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-08 Score=83.21 Aligned_cols=82 Identities=23% Similarity=0.261 Sum_probs=61.8
Q ss_pred HHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCcccccc
Q 020916 83 QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-----GVDKCVLVGFSYGGMVSFKVAELYPNLVQA 157 (320)
Q Consensus 83 ~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 157 (320)
+...|...+.|+.+.+. ..+.+..++.+.......+++.+ +..+++|+|.|.||..++.+|+.+|+.+.-
T Consensus 93 vG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gp 167 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGP 167 (581)
T ss_pred HHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCc
Confidence 45567767777776654 23445568888777666666655 234899999999999999999999999999
Q ss_pred EEEecccccccc
Q 020916 158 MVVSGSILAMTD 169 (320)
Q Consensus 158 lvl~~~~~~~~~ 169 (320)
+|+.+++.....
T Consensus 168 lvlaGaPlsywa 179 (581)
T PF11339_consen 168 LVLAGAPLSYWA 179 (581)
T ss_pred eeecCCCccccc
Confidence 999888876544
|
Their function is unknown. |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-08 Score=79.38 Aligned_cols=87 Identities=15% Similarity=0.076 Sum_probs=65.5
Q ss_pred CCCCeEEEEcCCCCCccccH------HHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC----
Q 020916 61 PSKPVVVLVHGFAAEGIVTW------QFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG---- 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~------~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~---- 128 (320)
.+...||++-|.++.-+ .. ...+..+++. .+|+.+++||.|.|.... +.++++.|-.+.++++.
T Consensus 135 ~~~RWiL~s~GNg~~~E-~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~---s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYE-NRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP---SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCCcEEEEEcCChHHhh-hhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---CHHHHHHHHHHHHHHHHhccc
Confidence 47789999999887655 31 1223444444 899999999999998765 45788887777777662
Q ss_pred ---CCcEEEEEeChhHHHHHHHHHhC
Q 020916 129 ---VDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 129 ---~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+++++.|||+||.++..++..+
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhc
Confidence 25799999999999999877664
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.8e-10 Score=87.52 Aligned_cols=104 Identities=28% Similarity=0.294 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCCCccc---c----------H----HHHHHHhhcc-ceEEecCCCCCCCCCCCCCC-----CChhHH-
Q 020916 61 PSKPVVVLVHGFAAEGIV---T----------W----QFQVGALTKK-YSVYIPDLLFFGGSITDEAD-----RSPTFQ- 116 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~---~----------~----~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~-----~~~~~~- 116 (320)
++-|.||++||-++.... . + ..+...|+++ |-|+++|.+|+|+....... ++.+.+
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 567899999997765420 0 1 1246778888 99999999999998654311 111121
Q ss_pred --------------HHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 117 --------------AQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 117 --------------~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+-|....++.+ +.++|.++|+||||..++.+++.. ++|++.|..+...
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 22333455555 345799999999999999999886 5798888776544
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.7e-09 Score=86.93 Aligned_cols=227 Identities=17% Similarity=0.157 Sum_probs=135.4
Q ss_pred EcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc----ccHHHH--HHHhhcc-ceEEecCCC
Q 020916 27 EIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI----VTWQFQ--VGALTKK-YSVYIPDLL 99 (320)
Q Consensus 27 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~----~~~~~~--~~~l~~~-~~vi~~d~~ 99 (320)
....|.++..-++.+..-. .-++-|+++++-|.++-.- ..+... ...|+.. |-|+.+|-|
T Consensus 619 qs~tg~~lYgmiyKPhn~~-------------pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR 685 (867)
T KOG2281|consen 619 QSKTGLTLYGMIYKPHNFQ-------------PGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNR 685 (867)
T ss_pred ecCCCcEEEEEEEccccCC-------------CCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCC
Confidence 4444666655555543222 1135689999999886322 022222 2345555 999999999
Q ss_pred CCCCCCCCC--------CCCChhHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 100 FFGGSITDE--------ADRSPTFQAQCLATGLAKLG---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 100 G~G~s~~~~--------~~~~~~~~~~~l~~~l~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
|.-...... ..-..+++++.+.-+.++.+ .+++.+-|||+||.+++....++|+-++..|.-+|... +
T Consensus 686 GS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~-W 764 (867)
T KOG2281|consen 686 GSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTD-W 764 (867)
T ss_pred CccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCccee-e
Confidence 854433211 23467778888888888764 57899999999999999999999986665554443321 1
Q ss_pred ccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC
Q 020916 169 DSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (320)
......... +-...|+..-..|.. ....... ..++.-
T Consensus 765 ~~YDTgYTE----------------------------RYMg~P~~nE~gY~a------gSV~~~V---------eklpde 801 (867)
T KOG2281|consen 765 RLYDTGYTE----------------------------RYMGYPDNNEHGYGA------GSVAGHV---------EKLPDE 801 (867)
T ss_pred eeecccchh----------------------------hhcCCCccchhcccc------hhHHHHH---------hhCCCC
Confidence 100000000 000011000000000 0000111 234444
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHHHh
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 310 (320)
....|++||--|..+-......+...+- ++..+++++|+-.|.+-. +...-+...+..|+++
T Consensus 802 pnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 802 PNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 4558999999999988777666665553 346799999999998864 4446677778888875
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.06 E-value=6e-08 Score=82.22 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=85.7
Q ss_pred eEEEcC--CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHH----------------
Q 020916 24 HAVEIE--PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVG---------------- 85 (320)
Q Consensus 24 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~---------------- 85 (320)
.++++. .+..|.||....... ..+.|.||++.|.++++. .+..+.+
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~~---------------~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~ 77 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRND---------------PEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLED 77 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SSG---------------GCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE
T ss_pred EEEecCCCCCcEEEEEEEEeCCC---------------CCCccEEEEecCCceecc-ccccccccCceEEeecccccccc
Confidence 356665 678899988765331 247899999999999988 7755432
Q ss_pred ---HhhccceEEecCCC-CCCCCCCCCCC---CChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHh-
Q 020916 86 ---ALTKKYSVYIPDLL-FFGGSITDEAD---RSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAEL- 150 (320)
Q Consensus 86 ---~l~~~~~vi~~d~~-G~G~s~~~~~~---~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~- 150 (320)
.+.+..+++.+|.| |.|.|...... .+.+..++++..+|+.. ...+++|.|-|+||..+-.+|..
T Consensus 78 n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i 157 (415)
T PF00450_consen 78 NPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYI 157 (415)
T ss_dssp -TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHH
T ss_pred cccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhh
Confidence 12233789999955 89999765543 46777888888888754 34589999999999988777743
Q ss_pred ---C------ccccccEEEecccccc
Q 020916 151 ---Y------PNLVQAMVVSGSILAM 167 (320)
Q Consensus 151 ---~------p~~v~~lvl~~~~~~~ 167 (320)
. +-.++|+++.++....
T Consensus 158 ~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 158 LQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hhccccccccccccccceecCccccc
Confidence 2 2347899998887654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=8.2e-10 Score=87.32 Aligned_cols=206 Identities=18% Similarity=0.136 Sum_probs=113.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC--CCCCCCCCC---CC---hhHHHHHHHHHHHHh-----
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF--GGSITDEAD---RS---PTFQAQCLATGLAKL----- 127 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~--G~s~~~~~~---~~---~~~~~~~l~~~l~~~----- 127 (320)
..|.||+-||.++... .|..+++.|++. |-|.++|.+|- |........ +. +.+...|+..+|+.+
T Consensus 70 ~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 6799999999999988 999999999999 99999999983 333221111 11 112234444444333
Q ss_pred --------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccc--ccccccc-cccccccccccccccccCcCcHHHH
Q 020916 128 --------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI--LAMTDSI-NETNLNRLGVSSSSELLLPNSVKGL 196 (320)
Q Consensus 128 --------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
+..+|.++|||+||..+++.+....+......-+... ....... ....+...
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~----------------- 211 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQC----------------- 211 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccc-----------------
Confidence 3458999999999999999986654321111101100 0000000 00000000
Q ss_pred HHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHH--hhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHH
Q 020916 197 KALLSVATYKKLWFPSCLYKDFLEVMFANRKERAEL--LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKE 273 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~ 273 (320)
...+.+ ......++......+ ...+...--...+.+++.|++++.|..|.+.|... ......
T Consensus 212 ---------~av~~~------~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~ 276 (365)
T COG4188 212 ---------AAVWLP------RQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFG 276 (365)
T ss_pred ---------cccccc------hhhhccccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccc
Confidence 000000 000000000000000 00000001134677899999999999999776543 445566
Q ss_pred HhCCCCeEEEEecCCCcccccCChHHH
Q 020916 274 QLGADHVTFQGIKKAGHLVHLERPCAY 300 (320)
Q Consensus 274 ~~~~~~~~~~~~~~~gH~~~~~~~~~~ 300 (320)
.+++...-+..++++.|+-+.+-.++.
T Consensus 277 ~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 277 YLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cCCcchhheeecCCCccccccccCccc
Confidence 676333468889999999998866553
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.4e-10 Score=89.84 Aligned_cols=107 Identities=22% Similarity=0.285 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCCCCCc-cccHH-HHHH-Hhhc--c-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------C
Q 020916 61 PSKPVVVLVHGFAAEG-IVTWQ-FQVG-ALTK--K-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------G 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~-~~~~~-~~~~-~l~~--~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~ 128 (320)
.++|++|++|||.++. ...|. .+.+ .|.. . ++||++|+...-...-...........+.+..+|+.| .
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 5789999999999887 32454 3444 4555 4 9999999963211100000011222233344444333 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEecccccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVSGSILAM 167 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 167 (320)
.++++|||||+||.+|-.++..... +|.+++.++|+.+.
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 5689999999999999999988877 89999999998754
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.4e-10 Score=82.54 Aligned_cols=98 Identities=26% Similarity=0.245 Sum_probs=55.3
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhcc-ce---EEecCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHhCCCcEEEE
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YS---VYIPDLLFFGGSITDEAD----RSPTFQAQCLATGLAKLGVDKCVLV 135 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~---vi~~d~~G~G~s~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~lv 135 (320)
.||||+||.+++....|..+.+.|.++ |. |+++++-....+...... .+..++.+.+.+++++-+. ++.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 479999999985544999999999988 87 899998543332111100 1112334444555556687 99999
Q ss_pred EeChhHHHHHHHHHhCccccccEEEecc
Q 020916 136 GFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
||||||.++-.+..-. ..++..+-+.+
T Consensus 81 gHS~G~~iaR~yi~~~-~~~d~~~~lg~ 107 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG-GGADKVVNLGP 107 (219)
T ss_dssp EETCHHHHHHHHHHHC-TGGGTEEE---
T ss_pred EcCCcCHHHHHHHHHc-CCCCcccCccc
Confidence 9999999999888654 33444444443
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.3e-08 Score=77.69 Aligned_cols=129 Identities=21% Similarity=0.323 Sum_probs=89.3
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH--HHhhcc--ceEEe
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV--GALTKK--YSVYI 95 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~--~~l~~~--~~vi~ 95 (320)
..+...+.. +|.+.+|+.+.|+..+ .+.|.||++||..++.. .++... +.|++. |-|+.
T Consensus 34 ~~~~~s~~~-~g~~r~y~l~vP~g~~---------------~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~y 96 (312)
T COG3509 34 GSSVASFDV-NGLKRSYRLYVPPGLP---------------SGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAY 96 (312)
T ss_pred cCCcccccc-CCCccceEEEcCCCCC---------------CCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEEC
Confidence 445566666 6888999887765432 35589999999999887 666554 666665 99999
Q ss_pred cCCC-------CCCCCCCCCC----CCChhHHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhCccccccEEEec
Q 020916 96 PDLL-------FFGGSITDEA----DRSPTFQAQCLATGLAKLGVD--KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSG 162 (320)
Q Consensus 96 ~d~~-------G~G~s~~~~~----~~~~~~~~~~l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 162 (320)
+|-- +.+.+..+.. ......+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..++
T Consensus 97 Pdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VA 176 (312)
T COG3509 97 PDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVA 176 (312)
T ss_pred cCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeee
Confidence 8521 2233322221 122333344444445555555 79999999999999999999999999988887
Q ss_pred ccc
Q 020916 163 SIL 165 (320)
Q Consensus 163 ~~~ 165 (320)
+..
T Consensus 177 g~~ 179 (312)
T COG3509 177 GLL 179 (312)
T ss_pred ccc
Confidence 765
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.95 E-value=7.8e-09 Score=86.10 Aligned_cols=91 Identities=15% Similarity=0.084 Sum_probs=68.4
Q ss_pred CccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHH----HHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 75 EGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT----GLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~----~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
... .|..+++.|.+...+...|++|+|.+-... ...+...+++.+ +.+..+.++++|+||||||.++..++..
T Consensus 106 ~~~-~~~~li~~L~~~GY~~~~dL~g~gYDwR~~--~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 106 EVY-YFHDMIEQLIKWGYKEGKTLFGFGYDFRQS--NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred hHH-HHHHHHHHHHHcCCccCCCcccCCCCcccc--ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 445 899999999998445589999999986543 223333444444 4445567899999999999999999988
Q ss_pred Cccc----cccEEEeccccccc
Q 020916 151 YPNL----VQAMVVSGSILAMT 168 (320)
Q Consensus 151 ~p~~----v~~lvl~~~~~~~~ 168 (320)
+|+. |+++|.++++....
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCC
Confidence 8763 78999998876543
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.2e-08 Score=77.61 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=62.3
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHh-------hcc-ceEEecCCCC-CCCCCCCCCCCChhHHHHHHHHH-HHHhC--CC
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGAL-------TKK-YSVYIPDLLF-FGGSITDEADRSPTFQAQCLATG-LAKLG--VD 130 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l-------~~~-~~vi~~d~~G-~G~s~~~~~~~~~~~~~~~l~~~-l~~~~--~~ 130 (320)
-|.|||+||.+..+......+...+ .+. +-|+++.+-- +-.++. ..........+.+.+. .++.+ ..
T Consensus 191 ~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~~l~~~idli~~vlas~ynID~s 269 (387)
T COG4099 191 YPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLLYLIEKIDLILEVLASTYNIDRS 269 (387)
T ss_pred ccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-ccchhHHHHHHHHHHHHhhccCcccc
Confidence 3999999999987763444333221 111 3455555221 111221 1111222233334422 23334 35
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
++.++|.|+||..++.++.++|+.+.+.+++++..
T Consensus 270 RIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 270 RIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred eEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 79999999999999999999999999999998764
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.2e-08 Score=81.73 Aligned_cols=177 Identities=18% Similarity=0.210 Sum_probs=114.0
Q ss_pred CCCeEEEEcCCC-C---Ccc-ccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH--------HhC
Q 020916 62 SKPVVVLVHGFA-A---EGI-VTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA--------KLG 128 (320)
Q Consensus 62 ~~~~vv~lhG~~-~---~~~-~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~--------~~~ 128 (320)
..|.++++||.+ . +.+ ..|........+...+-++|++.- ....++...++.+..+.+ ++.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~------igG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP------IGGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC------CCCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 568899999988 1 111 123333333343378888888732 111344444444444443 223
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCc-cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYP-NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
..+++|+|.|||+.++.+...... ..|+++|.++-+........
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr----------------------------------- 293 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR----------------------------------- 293 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc-----------------------------------
Confidence 458999999999888887775543 24888888775542211100
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK 287 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (320)
...++.+-.++.|+|+|.|.+|..++++..+.+.+++. ...+++++.+
T Consensus 294 -------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMq-A~~elhVI~~ 341 (784)
T KOG3253|consen 294 -------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQ-AEVELHVIGG 341 (784)
T ss_pred -------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhh-ccceEEEecC
Confidence 11222345577899999999999999999999999987 6788999999
Q ss_pred CCcccccCC---------hHHHHHHHHHHHHhh
Q 020916 288 AGHLVHLER---------PCAYNRCLKQFLASL 311 (320)
Q Consensus 288 ~gH~~~~~~---------~~~~~~~i~~fl~~~ 311 (320)
++|.+-... ..++...+.++|.++
T Consensus 342 adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 342 ADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred CCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 999865422 245555555555544
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.5e-07 Score=68.99 Aligned_cols=102 Identities=19% Similarity=0.157 Sum_probs=72.0
Q ss_pred CeEEEEcCCCCCccccHHHHHHHhhccc------eEEecCCCCC----CCCCC----C-------CCCCChhHHHHHHHH
Q 020916 64 PVVVLVHGFAAEGIVTWQFQVGALTKKY------SVYIPDLLFF----GGSIT----D-------EADRSPTFQAQCLAT 122 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~~~~~l~~~~------~vi~~d~~G~----G~s~~----~-------~~~~~~~~~~~~l~~ 122 (320)
-|.|||||.+++.. +...++..|...+ -++.+|--|- |.=+. | ....+..++...+..
T Consensus 46 iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 47899999999999 9999998887664 2445554441 11010 1 012345555666766
Q ss_pred HHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEeccccc
Q 020916 123 GLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILA 166 (320)
Q Consensus 123 ~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 166 (320)
++..| ++.++.+|||||||.-...++..+.. .+..+|.++++..
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 66655 67899999999999999999877532 3889999998765
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.7e-08 Score=75.53 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCC-----C--CCC--------------CC------
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSIT-----D--EAD--------------RS------ 112 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~-----~--~~~--------------~~------ 112 (320)
+.-|.|||-||++++.. .|..+.-.|+.+ |-|.+++.|-+-.+-. . .+. ..
T Consensus 116 ~k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 45699999999999999 999999999999 9999999985433210 0 000 00
Q ss_pred --hhHHHHHHHH---HHHHh------------------------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 113 --PTFQAQCLAT---GLAKL------------------------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 113 --~~~~~~~l~~---~l~~~------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
+...+..+.. +|+.+ +-.++.++|||+||..++.....+. .++..|++++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeee
Confidence 1111222222 22222 1126889999999999988877654 5888888887
Q ss_pred cc
Q 020916 164 IL 165 (320)
Q Consensus 164 ~~ 165 (320)
..
T Consensus 274 WM 275 (399)
T KOG3847|consen 274 WM 275 (399)
T ss_pred ee
Confidence 65
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.5e-07 Score=73.59 Aligned_cols=46 Identities=15% Similarity=0.164 Sum_probs=39.4
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhC--C-CCeEEEEecCCCcccc
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLG--A-DHVTFQGIKKAGHLVH 293 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~gH~~~ 293 (320)
.+.|+++.+|..|.++|....+.+.+.+. + .+++++.+++.+|...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 46899999999999999999988888776 3 4688899999999864
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-07 Score=65.80 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=64.6
Q ss_pred EEEEcCCCCCccccHHHHH--HHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHH
Q 020916 66 VVLVHGFAAEGIVTWQFQV--GALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMV 143 (320)
Q Consensus 66 vv~lhG~~~~~~~~~~~~~--~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~ 143 (320)
||.+||+.+|.. +.+... +.+.+..+-+.+-- +.....+...++.+..++...+.+.+.|+|.|+||+.
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~~~~~i~y~~--------p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDEDVRDIEYST--------PHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhccccceeeec--------CCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 899999999888 776543 44444433332221 2334577888999999999998777999999999999
Q ss_pred HHHHHHhCccccccEEEeccccc
Q 020916 144 SFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 144 a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|..++.++. +++ |+++|...
T Consensus 73 At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 73 ATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred HHHHHHHhC--Chh-hhcCCCcC
Confidence 999999875 454 44666653
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.7e-07 Score=74.26 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHh-hcc----ceEEecCCCCCC-CCCCCC-CCCChhHHHHHHHHHHHHh-----C
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGAL-TKK----YSVYIPDLLFFG-GSITDE-ADRSPTFQAQCLATGLAKL-----G 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l-~~~----~~vi~~d~~G~G-~s~~~~-~~~~~~~~~~~l~~~l~~~-----~ 128 (320)
...|+|+++||............+..| .+. .-++.+|..+.. .+.... .....+.+++++.-.++.. +
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 356899999995422110112233333 222 346677753211 111001 1112233456666666653 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
.++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3568999999999999999999999999999998764
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.8e-08 Score=70.85 Aligned_cols=81 Identities=16% Similarity=0.232 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccc-eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKY-SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
++..|||..|||++.. .+.++. +.+.+ -++++|+|-.- .+. + ..+.+.+.|||+|||
T Consensus 10 ~~~LilfF~GWg~d~~-~f~hL~--~~~~~D~l~~yDYr~l~----------~d~---~------~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 10 GKELILFFAGWGMDPS-PFSHLI--LPENYDVLICYDYRDLD----------FDF---D------LSGYREIYLVAWSMG 67 (213)
T ss_pred CCeEEEEEecCCCChH-Hhhhcc--CCCCccEEEEecCcccc----------ccc---c------cccCceEEEEEEeHH
Confidence 4679999999999988 666553 23333 35678887321 110 1 124578999999999
Q ss_pred HHHHHHHHHhCccccccEEEeccccc
Q 020916 141 GMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 141 g~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
-.+|..+....| ++..|.+++.+.
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCC
Confidence 999988876543 666666766553
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.2e-08 Score=74.39 Aligned_cols=105 Identities=19% Similarity=0.200 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHH---HhhccceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHh----CCCcE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVG---ALTKKYSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKL----GVDKC 132 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~---~l~~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~----~~~~~ 132 (320)
+.+..+||+||+..+........++ .+.-...++.+.+|+.|.-..-. ...+...-...+..+|+.+ +.+++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 4788999999999875522222222 22222589999999887632211 1122333345555555554 56789
Q ss_pred EEEEeChhHHHHHHHHHhC----c-----cccccEEEecccc
Q 020916 133 VLVGFSYGGMVSFKVAELY----P-----NLVQAMVVSGSIL 165 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~----p-----~~v~~lvl~~~~~ 165 (320)
+|++||||+.+.+...... + .++..+|+++|-.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 9999999999999887541 1 2577888887654
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.74 E-value=9.6e-07 Score=68.78 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=52.3
Q ss_pred CCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHH
Q 020916 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFL 308 (320)
Q Consensus 246 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 308 (320)
....+|-++++++.|.+++.+..++..+... +.+++...++++.|..|+ .+|++..+.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4456899999999999999998888776654 235788888999999886 58999999999884
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.74 E-value=7e-06 Score=65.94 Aligned_cols=128 Identities=12% Similarity=0.107 Sum_probs=80.1
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHHHHHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~vi~~d 97 (320)
-+.+.+..++..-+..|.... .......||+|||.+.+.. .....+-..|.+. +..+++.
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~-----------------~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit 124 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPAN-----------------SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSIT 124 (310)
T ss_pred hhcEEeecCCEEEEEEEeccc-----------------CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEec
Confidence 355667775444555555443 1235669999999998875 1334555677777 9999988
Q ss_pred CCCC--CCCCC-----------CC---CCC-------------C----hhHHHHHHHHHHHH---hCCCcEEEEEeChhH
Q 020916 98 LLFF--GGSIT-----------DE---ADR-------------S----PTFQAQCLATGLAK---LGVDKCVLVGFSYGG 141 (320)
Q Consensus 98 ~~G~--G~s~~-----------~~---~~~-------------~----~~~~~~~l~~~l~~---~~~~~~~lvGhS~Gg 141 (320)
+|.- ..... .. ... . .+.+..-|.+++.. .+..+++|+||+.|+
T Consensus 125 ~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA 204 (310)
T PF12048_consen 125 LPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGA 204 (310)
T ss_pred CCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhH
Confidence 8861 10000 00 000 0 11222333333333 354569999999999
Q ss_pred HHHHHHHHhCcc-ccccEEEecccc
Q 020916 142 MVSFKVAELYPN-LVQAMVVSGSIL 165 (320)
Q Consensus 142 ~~a~~~a~~~p~-~v~~lvl~~~~~ 165 (320)
.+++.+....+. .++++|++++..
T Consensus 205 ~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 205 GWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHHHHHHhcCCCcccCeEEEEeCCC
Confidence 999999988764 589999999865
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.9e-08 Score=74.26 Aligned_cols=99 Identities=23% Similarity=0.234 Sum_probs=69.0
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHH-HHHHhCC--CcEEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT-GLAKLGV--DKCVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~-~l~~~~~--~~~~lvGhS~ 139 (320)
+..|||+-|..+-.+ -.-+...+...|.|+.+++||++.|...+-.......++.+.+ .|..++. +.+++.|+|.
T Consensus 243 q~LvIC~EGNAGFYE--vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSI 320 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYE--VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSI 320 (517)
T ss_pred ceEEEEecCCccceE--eeeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeec
Confidence 557788877665433 1112233444599999999999999876644333333343333 3566664 5799999999
Q ss_pred hHHHHHHHHHhCccccccEEEeccc
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
||..++.+|..+|+ |+++|+-++.
T Consensus 321 GGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 321 GGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred CCchHHHHhhcCCC-ceEEEeecch
Confidence 99999999999997 8998876654
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.9e-08 Score=73.55 Aligned_cols=86 Identities=16% Similarity=0.164 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhc---cceEEecCCCCCCCCCCCCCCCChhHH----HHHHHHHHHHhCC--CcE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTK---KYSVYIPDLLFFGGSITDEADRSPTFQ----AQCLATGLAKLGV--DKC 132 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~---~~~vi~~d~~G~G~s~~~~~~~~~~~~----~~~l~~~l~~~~~--~~~ 132 (320)
+...|||+||+.++.. .|..+...+.. .+.-..+...++.... ......++.. ++.+.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 5678999999999988 88887776665 2211122222221111 1111233333 4444444444443 479
Q ss_pred EEEEeChhHHHHHHHHH
Q 020916 133 VLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~ 149 (320)
.+|||||||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999976665
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.8e-07 Score=76.10 Aligned_cols=103 Identities=26% Similarity=0.148 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhcc-ce---EEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeC
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK-YS---VYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFS 138 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS 138 (320)
.-++|++||++.+.. .|..+...+... +. ++.+++++- +.........+.+..-+.+++...+.+++.|+|||
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 458999999977777 888877776665 55 888888865 22122234455566677777778888999999999
Q ss_pred hhHHHHHHHHHhCc--cccccEEEeccccccc
Q 020916 139 YGGMVSFKVAELYP--NLVQAMVVSGSILAMT 168 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~~ 168 (320)
+||.+...++...+ .+|+.++.++++-...
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 99999999999887 7899999999876543
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.7e-07 Score=67.92 Aligned_cols=231 Identities=16% Similarity=0.147 Sum_probs=121.5
Q ss_pred CCCeEEEEcCCCCCccccHHH--HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHH--------HHHHHH-----
Q 020916 62 SKPVVVLVHGFAAEGIVTWQF--QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQC--------LATGLA----- 125 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~--~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~--------l~~~l~----- 125 (320)
.++..|.+-|-+.+.. +++ +...+.++ ...+.++-|-+|...++..-...-..+.| |.+...
T Consensus 112 ~~~KOG~~a~tgdh~y--~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws 189 (371)
T KOG1551|consen 112 MADLCLSWALTGDHVY--TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWS 189 (371)
T ss_pred cCCeeEEEeecCCcee--EeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence 4455555555555543 333 33444444 77888888988887654322111111122 222222
Q ss_pred -HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh
Q 020916 126 -KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT 204 (320)
Q Consensus 126 -~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (320)
..+.+++.++|-||||.+|......++..|.-+-++++....... .+..+.. ....+.++.....
T Consensus 190 ~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~-teg~l~~-------------~~s~~~~~~~~t~ 255 (371)
T KOG1551|consen 190 SADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSA-TEGLLLQ-------------DTSKMKRFNQTTN 255 (371)
T ss_pred cccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhh-hhhhhhh-------------hhHHHHhhccCcc
Confidence 225679999999999999999998887666555444433211110 0000000 0011111111000
Q ss_pred hc--cccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCc-----EEEEecCCCCCCCHHHHHHHHHHhC
Q 020916 205 YK--KLWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQR-----VHLLWGEDDQIFNVELAHNMKEQLG 276 (320)
Q Consensus 205 ~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P-----~l~i~g~~D~~~~~~~~~~~~~~~~ 276 (320)
+. ....+..-.....+... ..+.....++..+...- ..+..+.+| +.++.+++|..+|......+.+.+|
T Consensus 256 ~~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~--T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WP 333 (371)
T KOG1551|consen 256 KSGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDEC--THVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWP 333 (371)
T ss_pred hhhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhh--chhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCC
Confidence 00 00011111111111111 11222222333222111 122222222 6788899999999988999999999
Q ss_pred CCCeEEEEecCCCcccc-cCChHHHHHHHHHHHHhhhh
Q 020916 277 ADHVTFQGIKKAGHLVH-LERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 277 ~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~~ 313 (320)
++++..++ +||..- +-+-+.+...|.+-|+++..
T Consensus 334 --g~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 334 --GCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred --CCEEEEee-cCceeeeehhchHHHHHHHHHHHhhhh
Confidence 99999998 599754 56778999999999988764
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.7e-06 Score=73.16 Aligned_cols=127 Identities=18% Similarity=0.140 Sum_probs=86.7
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEc--CCCCCccc--cHHHHHH---Hhhcc-ceEEe
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVH--GFAAEGIV--TWQFQVG---ALTKK-YSVYI 95 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lh--G~~~~~~~--~~~~~~~---~l~~~-~~vi~ 95 (320)
..|...||++|.-.++.+.+ .++.|+++..+ ...-.... .-....+ .++.+ |.|+.
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~----------------~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~ 85 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAG----------------AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVN 85 (563)
T ss_pred eeEEecCCeEEEEEEEccCC----------------CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEE
Confidence 45677799999998777632 25778888888 32222100 1112223 46666 99999
Q ss_pred cCCCCCCCCCCCCCCCChh--HHHHHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 96 PDLLFFGGSITDEADRSPT--FQAQCLATGLAKLG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 96 ~d~~G~G~s~~~~~~~~~~--~~~~~l~~~l~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
.|.||.|.|.......... .-..|+.+.+.... .+++..+|.|++|...+.+|+..|..+++++...+...
T Consensus 86 qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 86 QDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 9999999999765443221 12334444444442 36899999999999999999999888888887776654
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.6e-05 Score=64.38 Aligned_cols=105 Identities=15% Similarity=0.130 Sum_probs=69.1
Q ss_pred CCCeEEEEcCCCCCccccHHHH-------HHHhhccceEEecCCCCCCCC-CCCCCCCChhHHHHHHHHHHHHhCCCcEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ-------VGALTKKYSVYIPDLLFFGGS-ITDEADRSPTFQAQCLATGLAKLGVDKCV 133 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~-------~~~l~~~~~vi~~d~~G~G~s-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 133 (320)
+.|+||++||+|-.-. ....+ ...|. ...+++.|+.-...- ....-+..+.+.++-...+++..+.++++
T Consensus 121 ~DpVlIYlHGGGY~l~-~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLG-TTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEec-CCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 5799999999885443 22222 23333 468888888643200 01112234445566666777677888999
Q ss_pred EEEeChhHHHHHHHHHhCc-----cccccEEEeccccccc
Q 020916 134 LVGFSYGGMVSFKVAELYP-----NLVQAMVVSGSILAMT 168 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~~~ 168 (320)
|+|-|.||.+++.+++... ...+++|+++|.....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999998875421 1368999999998665
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.7e-05 Score=64.65 Aligned_cols=61 Identities=21% Similarity=0.292 Sum_probs=49.5
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC---------------------C-C-CeEEEEecCCCcccccCChHHHHHHHH
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG---------------------A-D-HVTFQGIKKAGHLVHLERPCAYNRCLK 305 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------------------~-~-~~~~~~~~~~gH~~~~~~~~~~~~~i~ 305 (320)
..+||+..|+.|.+++.-..+.+.+.+. . . +.+++.+-+|||+.. .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 3689999999999999877777766553 0 1 267778889999996 68999999999
Q ss_pred HHHHh
Q 020916 306 QFLAS 310 (320)
Q Consensus 306 ~fl~~ 310 (320)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.1e-05 Score=65.19 Aligned_cols=105 Identities=20% Similarity=0.180 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHH----------------H-------hhccceEEecC-CCCCCCCCCCCC--CCChh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVG----------------A-------LTKKYSVYIPD-LLFFGGSITDEA--DRSPT 114 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~----------------~-------l~~~~~vi~~d-~~G~G~s~~~~~--~~~~~ 114 (320)
...|.|+++-|.++++. .+..+.+ . +.+..+++.+| ..|.|.|..... ..+.+
T Consensus 66 ~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~ 144 (437)
T PLN02209 66 QEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDT 144 (437)
T ss_pred CCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 46799999999998887 5543321 1 12226899999 558888864332 12233
Q ss_pred HHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhC----------ccccccEEEeccccc
Q 020916 115 FQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELY----------PNLVQAMVVSGSILA 166 (320)
Q Consensus 115 ~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~----------p~~v~~lvl~~~~~~ 166 (320)
..++++..+++.. ...+++|.|.|+||..+-.+|..- +-.++|+++.++...
T Consensus 145 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 4456666666543 235799999999999777776431 114678888887654
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.8e-06 Score=59.93 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=73.3
Q ss_pred CCCeEEEEcCCCCCcc--ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC----CcEEE
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV----DKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~l 134 (320)
.+..|||+-|++..-. ..-..+...|.+. |.++-+.++.+-. .....++.+-++|+..++++++. ..++|
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~---G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN---GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc---ccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 4567999999886543 2456677888887 9999988763210 01224566678999999998853 37999
Q ss_pred EEeChhHHHHHHHHHh--CccccccEEEeccccc
Q 020916 135 VGFSYGGMVSFKVAEL--YPNLVQAMVVSGSILA 166 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 166 (320)
+|||.|+.-.+.+... .+..+.+.|+.+|...
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 9999999999988833 3556778788777653
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.4e-06 Score=64.69 Aligned_cols=101 Identities=20% Similarity=0.118 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCC--CCccccHHHHHHHhhc--cceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHHHhC--CCcEEE
Q 020916 62 SKPVVVLVHGFA--AEGIVTWQFQVGALTK--KYSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLAKLG--VDKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~--~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~~~~--~~~~~l 134 (320)
...|||+.||++ .+.. ....+.+.+.+ .+.+..+. .|-+. ...- ..+.++++.+.+.+.... .+-+.+
T Consensus 25 ~~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~G~na 99 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELSEGYNI 99 (306)
T ss_pred CCCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhcCceEE
Confidence 456899999999 4444 67777777752 23333333 22121 1111 345566666665554421 135999
Q ss_pred EEeChhHHHHHHHHHhCcc--ccccEEEecccccc
Q 020916 135 VGFSYGGMVSFKVAELYPN--LVQAMVVSGSILAM 167 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 167 (320)
||+|.||.++-.++.+.|+ .|+.+|.++++...
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 9999999999999999877 49999999887543
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.6e-06 Score=67.63 Aligned_cols=150 Identities=15% Similarity=0.151 Sum_probs=93.4
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh-hc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT-YK 206 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 206 (320)
.++++++.|.|==|..++..|. ...||++++-+.-... .....+...+.... ..
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~L------------------------N~~~~l~h~y~~yG~~w 224 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVL------------------------NMKANLEHQYRSYGGNW 224 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccC------------------------CcHHHHHHHHHHhCCCC
Confidence 5779999999999999998888 4568888775432221 01111222222111 11
Q ss_pred cccCCchhHHHHHHHHhc---ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEE
Q 020916 207 KLWFPSCLYKDFLEVMFA---NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ 283 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 283 (320)
. ....+|...-+. +.+....+..- -+.-....+++.|.++|.|..|++..++....+.+.++ +...+.
T Consensus 225 s-----~a~~dY~~~gi~~~l~tp~f~~L~~i---vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~-G~K~lr 295 (367)
T PF10142_consen 225 S-----FAFQDYYNEGITQQLDTPEFDKLMQI---VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLP-GEKYLR 295 (367)
T ss_pred c-----cchhhhhHhCchhhcCCHHHHHHHHh---cCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCC-CCeeEE
Confidence 1 111122211110 11111111111 12222335668999999999999999999999999999 677899
Q ss_pred EecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 284 GIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 284 ~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
.+|+++|.... ..+.+.+..|+..+...
T Consensus 296 ~vPN~~H~~~~---~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 296 YVPNAGHSLIG---SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred eCCCCCcccch---HHHHHHHHHHHHHHHcC
Confidence 99999998776 66778888898886543
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.3e-06 Score=71.84 Aligned_cols=104 Identities=17% Similarity=0.108 Sum_probs=68.9
Q ss_pred CCCeEEEEcCCCCCcccc--HHHHHHHhhcc--ceEEecCCCCCCCCCCCC-------CCCChhHHHHHHHHHHHHhC--
Q 020916 62 SKPVVVLVHGFAAEGIVT--WQFQVGALTKK--YSVYIPDLLFFGGSITDE-------ADRSPTFQAQCLATGLAKLG-- 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~--~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~-------~~~~~~~~~~~l~~~l~~~~-- 128 (320)
++|.+|++-|=+ ..... ...++..|+++ --++++++|-+|.|.+.. ...+.++..+|+..+++++.
T Consensus 28 ~gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 466666665443 33212 22355667777 789999999999998532 23677778889988887763
Q ss_pred -----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 129 -----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 129 -----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
..|++++|-|+||.+|..+-.++|+.|.+.+..+++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 23799999999999999999999999999998888765
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.1e-06 Score=67.01 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhc--c-ceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHHHh----CCCcE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTK--K-YSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLAKL----GVDKC 132 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--~-~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~~~----~~~~~ 132 (320)
..+..+||+||+..+-...-.+.++-... . ...+.+.+|..|.--.-..+ .+...-..++..+|+.+ ..+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 46789999999987655333344433322 2 78899999976653322211 22222344555555554 46789
Q ss_pred EEEEeChhHHHHHHHHHhC--------ccccccEEEecccc
Q 020916 133 VLVGFSYGGMVSFKVAELY--------PNLVQAMVVSGSIL 165 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~--------p~~v~~lvl~~~~~ 165 (320)
+|++||||..++++...+. +.+++-+|+.+|-.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999999999887642 33577777766544
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.00015 Score=60.69 Aligned_cols=128 Identities=15% Similarity=0.116 Sum_probs=82.8
Q ss_pred ceEEEcC--CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHh-------------
Q 020916 23 PHAVEIE--PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGAL------------- 87 (320)
Q Consensus 23 ~~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l------------- 87 (320)
..++.+. .+..|+||...... .+..+|.||++.|.++.+. .- .+..++
T Consensus 46 sGYv~v~~~~~~~LFYwf~eS~~---------------~P~~dPlvLWLnGGPGCSS-l~-G~~~E~GPf~v~~~G~tL~ 108 (454)
T KOG1282|consen 46 SGYVTVNESEGRQLFYWFFESEN---------------NPETDPLVLWLNGGPGCSS-LG-GLFEENGPFRVKYNGKTLY 108 (454)
T ss_pred cceEECCCCCCceEEEEEEEccC---------------CCCCCCEEEEeCCCCCccc-hh-hhhhhcCCeEEcCCCCcce
Confidence 3567775 58899998776532 1246899999999999887 33 222221
Q ss_pred ------hccceEEecCCC-CCCCCCCCCC-C--CChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHh
Q 020916 88 ------TKKYSVYIPDLL-FFGGSITDEA-D--RSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 88 ------~~~~~vi~~d~~-G~G~s~~~~~-~--~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.+..+++.+|.| |.|.|-.... + .+.+..++|+..++... .-.++.|.|-|++|...-.+|.+
T Consensus 109 ~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 109 LNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred eCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 122578888876 7777764432 1 24445566666665432 34689999999999877777653
Q ss_pred ----Cc------cccccEEEecccccc
Q 020916 151 ----YP------NLVQAMVVSGSILAM 167 (320)
Q Consensus 151 ----~p------~~v~~lvl~~~~~~~ 167 (320)
+. -.++|+++-++....
T Consensus 189 I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 189 ILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred HHhccccccCCcccceEEEecCcccCc
Confidence 21 147788877776543
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.2e-06 Score=71.08 Aligned_cols=129 Identities=16% Similarity=0.123 Sum_probs=80.8
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHH-HhhccceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVG-ALTKKYSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~-~l~~~~~vi~~d~~ 99 (320)
++......||++|.|.+.+. ..+ ..+.|++|+--|...-+. +.|..... .|.+....+..+.|
T Consensus 395 eQ~~atSkDGT~IPYFiv~K-~~~--------------~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIR 459 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRK-GAK--------------KDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIR 459 (648)
T ss_pred EEEEEEcCCCccccEEEEec-CCc--------------CCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecc
Confidence 44455555999999987752 111 125777776655443322 45555554 45555777778899
Q ss_pred CCCCCCCCC----CCCChhHHHHHHHHHHHHh---C---CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 100 FFGGSITDE----ADRSPTFQAQCLATGLAKL---G---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 100 G~G~s~~~~----~~~~~~~~~~~l~~~l~~~---~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
|=|+=.+.- ...+-+...+|..++.+.| + .+++.+.|-|-||.+.-....++|+.+.++|+--|..
T Consensus 460 GGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 460 GGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred cCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 866543211 1122233455555555554 2 3578999999999999999999999888877655544
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.36 E-value=7.9e-06 Score=65.90 Aligned_cols=68 Identities=19% Similarity=0.249 Sum_probs=53.3
Q ss_pred CCCCCC-CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH---HHHHHHHHHHHhh
Q 020916 244 TVPNFP-QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC---AYNRCLKQFLASL 311 (320)
Q Consensus 244 ~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~ 311 (320)
.+..+. +|+|+++|.+|..+|......+.+.......+...+++++|........ +....+.+|+.+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 344454 7999999999999999999998888872256888888999998864433 6778888888764
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.7e-05 Score=62.04 Aligned_cols=102 Identities=18% Similarity=0.151 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCCCCcc-ccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CCcEEEEE
Q 020916 62 SKPVVVLVHGFAAEGI-VTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--VDKCVLVG 136 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvG 136 (320)
...|+|+.||+|.+.. .....+.+.+... ..+.++.. |.+....--..+.++++.+.+.+.... .+-+.+||
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 5568999999998765 2333444444332 34444432 333211122455566666666555421 13599999
Q ss_pred eChhHHHHHHHHHhCcc--ccccEEEeccccc
Q 020916 137 FSYGGMVSFKVAELYPN--LVQAMVVSGSILA 166 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~ 166 (320)
+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999987 5999999988754
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.8e-06 Score=55.57 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=56.8
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
..|+|+|.++.|+++|.+.++.+.+.++ +.+++++++.||..+.....-+.+.+.+||..-.-+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~--~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~lP 97 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP--GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGTLP 97 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC--CceEEEEeccCcceecCCChHHHHHHHHHHHcCCCC
Confidence 4899999999999999999999999998 899999999999988755677899999999865443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.4e-05 Score=69.35 Aligned_cols=103 Identities=18% Similarity=0.163 Sum_probs=62.3
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhh-----------------ccceEEecCCCCCCCCCCCCCCCChhHHHHHHHH
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALT-----------------KKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~-----------------~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~ 122 (320)
+.++-||+|++|..|+.. .-+.++..-. .+++.+++|+-+- -..-...++.++++-+.+
T Consensus 86 elsGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe---~tAm~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE---FTAMHGHILLDQTEYVND 161 (973)
T ss_pred cCCCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch---hhhhccHhHHHHHHHHHH
Confidence 346789999999998877 6665543222 1256666665420 000112345555555555
Q ss_pred HHHHh-----C--------CCcEEEEEeChhHHHHHHHHHh---CccccccEEEeccccc
Q 020916 123 GLAKL-----G--------VDKCVLVGFSYGGMVSFKVAEL---YPNLVQAMVVSGSILA 166 (320)
Q Consensus 123 ~l~~~-----~--------~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~~ 166 (320)
.|+.+ + ...++++||||||.+|...+.. .++.|.-++..+++..
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 55433 1 2249999999999999877743 2345666666666543
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.3e-05 Score=69.62 Aligned_cols=105 Identities=18% Similarity=0.072 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCCCC---cc-ccHHHHHHHhhccceEEecCCC-C---CCCCCCCC--CCCChhHHHHH---HHHHHHHh
Q 020916 61 PSKPVVVLVHGFAAE---GI-VTWQFQVGALTKKYSVYIPDLL-F---FGGSITDE--ADRSPTFQAQC---LATGLAKL 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~---~~-~~~~~~~~~l~~~~~vi~~d~~-G---~G~s~~~~--~~~~~~~~~~~---l~~~l~~~ 127 (320)
+..|+||++||.+.. .. .....++.... .+.|+.+++| | +..+.... ....+.+.... +.+-++..
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 467999999996532 22 01222222211 2889999998 3 33222111 22333443333 33334444
Q ss_pred C--CCcEEEEEeChhHHHHHHHHHh--CccccccEEEeccccc
Q 020916 128 G--VDKCVLVGFSYGGMVSFKVAEL--YPNLVQAMVVSGSILA 166 (320)
Q Consensus 128 ~--~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 166 (320)
+ .++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4 4579999999999999888765 2346888888876553
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.7e-06 Score=66.08 Aligned_cols=51 Identities=22% Similarity=0.268 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHh-CC--CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 116 QAQCLATGLAKL-GV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 116 ~~~~l~~~l~~~-~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+.++|...|+.. .. ++..|+|+||||..|+.++.++|+.+.+++.+++...
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 455666666543 22 2279999999999999999999999999999998753
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00025 Score=54.56 Aligned_cols=105 Identities=17% Similarity=0.120 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
..|.|+++-.+.++.....+...+.|-....|+.-|+-.-..-+-....++++++++-+.+.+..+|.+ +++++.|.-+
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 456888888887766535566677787778899988864333333345689999999999999999965 7888888755
Q ss_pred HH-----HHHHHHhCccccccEEEecccccc
Q 020916 142 MV-----SFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 142 ~~-----a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
.- ++..+...|....+.++++++...
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 43 333444567678899999887653
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.9e-05 Score=57.54 Aligned_cols=104 Identities=17% Similarity=0.141 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCCCccccHHH---HHHHhhcc-ceEEecCCCCCCCC-----CCCC-------------C----CC-Chh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQF---QVGALTKK-YSVYIPDLLFFGGS-----ITDE-------------A----DR-SPT 114 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G~s-----~~~~-------------~----~~-~~~ 114 (320)
.-|++.++-|+..+.. .+.. +.+.-+++ +.|+++|-.-.|.. +..+ + .+ -.+
T Consensus 43 ~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHE-NFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred cCceEEEecCCcccch-hhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHH
Confidence 4689999999988776 4432 22233344 89999995433322 1111 0 01 122
Q ss_pred HHHHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 115 FQAQCLATGLAK----LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 115 ~~~~~l~~~l~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
...+.+-+++.. ++..++.|.||||||.=|+..+.+.|.+.+++-..+|...
T Consensus 122 Yv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 122 YVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 234555555552 2345799999999999999999999998888777666553
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00014 Score=59.33 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=44.5
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe-----------cCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 252 VHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI-----------KKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 252 ~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~-----------~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.+..|+..|..+|.+.-..+.+.+. +=+++++.+ .+..|.+-+..-..+.+.+-..++++..
T Consensus 296 yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 296 YVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQG 370 (403)
T ss_pred EEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhc
Confidence 6788999999999998888777664 246777777 3346776666666677777777766543
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00035 Score=60.01 Aligned_cols=108 Identities=17% Similarity=0.148 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCCCCCCCCC--------CCCCChhHHHHHHHHHHHHh--
Q 020916 60 KPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLFFGGSITD--------EADRSPTFQAQCLATGLAKL-- 127 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~--------~~~~~~~~~~~~l~~~l~~~-- 127 (320)
+++.|.+|..-|.-+.+. ..|....-.|.++ +--...-.||=|.-... ....++.++++....+++.=
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~ 524 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT 524 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC
Confidence 357788888777644433 3444333233344 33333344664443221 12356666665555555432
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
..+.++++|-|.||++.-..+...|+.++++|+--|....
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 2347999999999999999999999999999987776643
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.6e-05 Score=65.43 Aligned_cols=132 Identities=15% Similarity=0.119 Sum_probs=78.8
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~ 99 (320)
+...+...||+.+.-.+.-.+..+ ..+++|.+|..+|.-+-+- ..|..--..|.+. +-....|.|
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk~~k-------------~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VR 508 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKKDIK-------------LDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVR 508 (712)
T ss_pred EEEEEecCCCCccceEEEEechhh-------------hcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeec
Confidence 344455558877665433221111 2357888888877644322 3444332233344 666677889
Q ss_pred CCCCCCCCC--------CCCChhHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 100 FFGGSITDE--------ADRSPTFQAQCLATGLAK--LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 100 G~G~s~~~~--------~~~~~~~~~~~l~~~l~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|=|.-...- ...+++++.....-+++. ....+..+.|.|.||.++..++..+|+.+.++|+--|...
T Consensus 509 GGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 509 GGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred cCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 865443211 123444444443333332 1346799999999999999999999999999887666553
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=6e-05 Score=62.53 Aligned_cols=119 Identities=18% Similarity=0.252 Sum_probs=73.6
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCCC--C
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLLF--F 101 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~G--~ 101 (320)
+|...|.+|.+.. ...+.|++|+|||.+ ++.. ....--..|+++ +-|+.+++|= +
T Consensus 77 EDCL~LNIwaP~~-----------------~a~~~PVmV~IHGG~y~~Gs~s-~~~ydgs~La~~g~vVvVSvNYRLG~l 138 (491)
T COG2272 77 EDCLYLNIWAPEV-----------------PAEKLPVMVYIHGGGYIMGSGS-EPLYDGSALAARGDVVVVSVNYRLGAL 138 (491)
T ss_pred ccceeEEeeccCC-----------------CCCCCcEEEEEeccccccCCCc-ccccChHHHHhcCCEEEEEeCcccccc
Confidence 4777888888772 123679999999975 3333 222223456655 8888888871 1
Q ss_pred CCC--------CCCCCCCChhHHH---HHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCcc---ccccEEEecccc
Q 020916 102 GGS--------ITDEADRSPTFQA---QCLATGLAKLG--VDKCVLVGFSYGGMVSFKVAELYPN---LVQAMVVSGSIL 165 (320)
Q Consensus 102 G~s--------~~~~~~~~~~~~~---~~l~~~l~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~ 165 (320)
|.- .....+..+.+++ +.+.+-|++.| .++|.|+|+|.||+.++.+++. |. .+.++|+.++..
T Consensus 139 GfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 139 GFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred eeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 211 1111223444444 34444555665 4579999999999998877764 43 577777777766
Q ss_pred c
Q 020916 166 A 166 (320)
Q Consensus 166 ~ 166 (320)
.
T Consensus 218 ~ 218 (491)
T COG2272 218 S 218 (491)
T ss_pred C
Confidence 4
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.95 E-value=9.4e-05 Score=56.16 Aligned_cols=99 Identities=20% Similarity=0.224 Sum_probs=69.1
Q ss_pred CeEEEEcCCCCCcccc--HHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CCcEEEEEe
Q 020916 64 PVVVLVHGFAAEGIVT--WQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--VDKCVLVGF 137 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~--~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvGh 137 (320)
.|+|++||++.++. . ...+.+.+.+. ..|++.|. |-| .....-..+.++++.+.+.+.... .+-+.++|.
T Consensus 24 ~P~ii~HGigd~c~-~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCS-SLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccc-cchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 67999999998877 5 77777777776 77888876 344 111112345555665555555332 245999999
Q ss_pred ChhHHHHHHHHHhCcc-ccccEEEeccccc
Q 020916 138 SYGGMVSFKVAELYPN-LVQAMVVSGSILA 166 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 166 (320)
|.||.++-.++..-++ .|+.+|.++++-.
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999999887654 5889998887653
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00013 Score=61.02 Aligned_cols=81 Identities=19% Similarity=0.173 Sum_probs=56.6
Q ss_pred cHHHHHHHhhcc-c------eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHH
Q 020916 79 TWQFQVGALTKK-Y------SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 79 ~~~~~~~~l~~~-~------~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a 148 (320)
.|..+++.|.+. | ...-+|+|- +. ...+.....+...|+.. ..++++||||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~-----~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SP-----AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---ch-----hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 688999998763 2 333368771 11 12334455555555543 347899999999999999999
Q ss_pred HhCcc------ccccEEEecccccc
Q 020916 149 ELYPN------LVQAMVVSGSILAM 167 (320)
Q Consensus 149 ~~~p~------~v~~lvl~~~~~~~ 167 (320)
...+. .|+++|.++++...
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCC
Confidence 87743 59999999988653
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.82 E-value=9.9e-05 Score=64.97 Aligned_cols=121 Identities=17% Similarity=0.075 Sum_probs=65.7
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc----ccHHHHHHHhhcc-ceEEecCCC----
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI----VTWQFQVGALTKK-YSVYIPDLL---- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~----~~~~~~~~~l~~~-~~vi~~d~~---- 99 (320)
+|-..|.+|.+..... ....|++|+|||.+.... ..+. -...+..+ .-||.+++|
T Consensus 106 EDCL~LnI~~P~~~~~---------------~~~lPV~v~ihGG~f~~G~~~~~~~~-~~~~~~~~~vivVt~nYRlg~~ 169 (535)
T PF00135_consen 106 EDCLYLNIYTPSNASS---------------NSKLPVMVWIHGGGFMFGSGSFPPYD-GASLAASKDVIVVTINYRLGAF 169 (535)
T ss_dssp S---EEEEEEETSSSS---------------TTSEEEEEEE--STTTSSCTTSGGGH-THHHHHHHTSEEEEE----HHH
T ss_pred chHHHHhhhhcccccc---------------ccccceEEEeecccccCCCccccccc-ccccccCCCEEEEEeccccccc
Confidence 3666777777665221 114699999999764322 0222 22333444 999999998
Q ss_pred CCCCCCCCC---CCCChhHHHHHHHHHHH---HhC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 100 FFGGSITDE---ADRSPTFQAQCLATGLA---KLG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 100 G~G~s~~~~---~~~~~~~~~~~l~~~l~---~~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
|+-.+.... ....+.++...|..+-+ ..| .++|.|+|||.||..+..++..- ...++++|+.++..
T Consensus 170 Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 170 GFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 332222111 33445555444444433 344 45799999999999988777652 24699999998854
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.6e-05 Score=59.70 Aligned_cols=104 Identities=16% Similarity=0.091 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCCCCcc--ccHHHHHHHhhc---cceEEecCCCCCCCCC-CCCC-CCChhHHHHHHHHHHHHhC--CCcE
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQFQVGALTK---KYSVYIPDLLFFGGSI-TDEA-DRSPTFQAQCLATGLAKLG--VDKC 132 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~---~~~vi~~d~~G~G~s~-~~~~-~~~~~~~~~~l~~~l~~~~--~~~~ 132 (320)
+..|||+.||+|.+.. ..+..+.+.+.+ ..-|.+++.- -+.+. .... -..+...++.+.+.+.... ..-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 5568999999997642 134444444433 3456666552 21110 0000 0234445555666555432 1459
Q ss_pred EEEEeChhHHHHHHHHHhCcc-ccccEEEeccccc
Q 020916 133 VLVGFSYGGMVSFKVAELYPN-LVQAMVVSGSILA 166 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 166 (320)
.++|+|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 999999999999999999865 6999999988753
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0032 Score=51.28 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=48.6
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhC----------------------CCC-eEEEEecCCCcccccCChHHHHHHHHH
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLG----------------------ADH-VTFQGIKKAGHLVHLERPCAYNRCLKQ 306 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~ 306 (320)
.+||+..|+.|.+++.-..+.+.+.+. ..+ .+++.+-+|||+.. .+|+...+.+..
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~ 312 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQR 312 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHH
Confidence 689999999999999877777666553 012 67777889999996 589999999999
Q ss_pred HHHh
Q 020916 307 FLAS 310 (320)
Q Consensus 307 fl~~ 310 (320)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9965
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00022 Score=57.70 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=74.0
Q ss_pred CeEEEEcCCCCCccccHHH---HHHHhhcc--ceEEecCCCCCCCCCCCCC----------CCChhHHHHHHHHHHHHhC
Q 020916 64 PVVVLVHGFAAEGIVTWQF---QVGALTKK--YSVYIPDLLFFGGSITDEA----------DRSPTFQAQCLATGLAKLG 128 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~~~~~---~~~~l~~~--~~vi~~d~~G~G~s~~~~~----------~~~~~~~~~~l~~~l~~~~ 128 (320)
.+|+|--|.-++-. .|.. ++-.++.. .-+|..++|-+|+|.+-.. ..+.++-.+|.+.++.+++
T Consensus 81 gPIffYtGNEGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 66888888877665 4432 33444444 6788889999999975331 2455566778888887774
Q ss_pred ------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 129 ------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 ------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
..+++.+|-|+||+++..+=.++|+.|.|....+++.
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 2479999999999999999999999888876655554
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00076 Score=56.09 Aligned_cols=109 Identities=25% Similarity=0.280 Sum_probs=80.2
Q ss_pred eccCCCCCeEEEEcCCCCCccccHHH----HHHHhhcc--ceEEecCCCCCCCCCCCCC-------CCChhHHHHHHHHH
Q 020916 57 ALKKPSKPVVVLVHGFAAEGIVTWQF----QVGALTKK--YSVYIPDLLFFGGSITDEA-------DRSPTFQAQCLATG 123 (320)
Q Consensus 57 ~~~~~~~~~vv~lhG~~~~~~~~~~~----~~~~l~~~--~~vi~~d~~G~G~s~~~~~-------~~~~~~~~~~l~~~ 123 (320)
.+..+.+|..|+|-|=+.... .|.. ..-.++++ ..|+..++|-+|.|.+... ..+..+...|+..+
T Consensus 80 ~~~~~~gPiFLmIGGEgp~~~-~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~f 158 (514)
T KOG2182|consen 80 QWAKPGGPIFLMIGGEGPESD-KWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEF 158 (514)
T ss_pred ccccCCCceEEEEcCCCCCCC-CccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHH
Confidence 334567888999988665543 3411 22334444 7899999999998864331 14556678899999
Q ss_pred HHHhCC-------CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 124 LAKLGV-------DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 124 l~~~~~-------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|++++. .|.+.+|-|+-|.++..+=..+|+.+.|.|..+++..
T Consensus 159 I~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 159 IKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 988742 2799999999999999999999999999888777664
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0015 Score=47.90 Aligned_cols=105 Identities=21% Similarity=0.344 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCCCCccccHHH---------------HH-HHhhccceEEecCCCC---CCCCCCCC--CCCChhHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF---------------QV-GALTKKYSVYIPDLLF---FGGSITDE--ADRSPTFQAQC 119 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~---------------~~-~~l~~~~~vi~~d~~G---~G~s~~~~--~~~~~~~~~~~ 119 (320)
.++..+|+|||.|--....|.+ ++ +..+..|.|+..+.-- +-.+...+ ...+..+.+.-
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 3566899999988644435533 12 2333448888776431 11111111 11222222222
Q ss_pred -HHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc--ccccEEEecccc
Q 020916 120 -LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN--LVQAMVVSGSIL 165 (320)
Q Consensus 120 -l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 165 (320)
...++.....+.+.++.||.||...+.+..++|+ +|.++.+.+++.
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 2233344456789999999999999999999875 677777777664
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00035 Score=50.27 Aligned_cols=38 Identities=16% Similarity=0.021 Sum_probs=29.7
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCcc----ccccEEEecccc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPN----LVQAMVVSGSIL 165 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 165 (320)
...+++++|||+||.+|..++..... .+..++..+++.
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 45789999999999999999887654 456666666654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0099 Score=45.37 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCC--CccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHH----HHHHHHHHh----CC-
Q 020916 62 SKPVVVLVHGFAA--EGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ----CLATGLAKL----GV- 129 (320)
Q Consensus 62 ~~~~vv~lhG~~~--~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~----~l~~~l~~~----~~- 129 (320)
++.+|=|+-|... .....|+.+.+.|+++ |.|++.-+.- | .+-...+. .....++.+ +.
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t--------fDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T--------FDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C--------CcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4456667766533 3335899999999988 9999976641 1 11111222 122222222 21
Q ss_pred ---CcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 130 ---DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 130 ---~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
-+++-+|||+|+-+-+.+...++..-++-++++..-
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 267889999999999988877765556777776543
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00023 Score=41.85 Aligned_cols=48 Identities=23% Similarity=0.367 Sum_probs=27.6
Q ss_pred CCCceEEEcCCCceeeEeccCccc-ccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETI-EKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW 80 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~ 80 (320)
..+.+.|.++||..|..+....+. ..+ ..+.+|+|++.||+.+++. .|
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~------------~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSN------------QNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTT------------TTTT--EEEEE--TT--GG-GG
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcc------------cCCCCCcEEEECCcccChH-HH
Confidence 357889999999999886554432 110 2257899999999999988 76
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0011 Score=53.33 Aligned_cols=108 Identities=19% Similarity=0.148 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCCCCcc--ccHHHHHHHhhcc-ceEEecCCC--------------CCCCCCCCC---C-----CCChhH
Q 020916 61 PSKPVVVLVHGFAAEGI--VTWQFQVGALTKK-YSVYIPDLL--------------FFGGSITDE---A-----DRSPTF 115 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~vi~~d~~--------------G~G~s~~~~---~-----~~~~~~ 115 (320)
.+-|+++++||..++.. .....+-+..... +.++++|-. |-+.|--.+ . .+.++.
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 35678899999987753 1122222333333 666665322 222221111 1 123332
Q ss_pred -HHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 116 -QAQCLATGLAKLGV-----DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 116 -~~~~l~~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
+.+++-+.+++... ++-.++||||||.=|+.+|.++|++++.+...++.....
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 35566645543322 268999999999999999999999999998888877544
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0058 Score=56.53 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=69.9
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCC-CCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSIT-DEADRSPTFQAQCLATGLAKLGV-DKCVLVGFS 138 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS 138 (320)
...|++.|+|..-+... .+..++..|. .|-+|.... ..+..+++..++....-++.+.. +|+.++|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 47899999999988777 6777666553 234443322 22446788888877777777764 689999999
Q ss_pred hhHHHHHHHHHhCc--cccccEEEecccccc
Q 020916 139 YGGMVSFKVAELYP--NLVQAMVVSGSILAM 167 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~ 167 (320)
+|+.++..+|.... +....+|++++.+..
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 99999999986542 335668999877643
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00023 Score=49.47 Aligned_cols=79 Identities=14% Similarity=0.092 Sum_probs=53.2
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccc-eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKY-SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
...||+.-||+..+. ....++ +.+++ -++++|+..... +.++ .+ .+.+.||++|||-
T Consensus 11 d~LIvyFaGwgtpps-~v~HLi--lpeN~dl~lcYDY~dl~l------dfDf-------sA------y~hirlvAwSMGV 68 (214)
T COG2830 11 DHLIVYFAGWGTPPS-AVNHLI--LPENHDLLLCYDYQDLNL------DFDF-------SA------YRHIRLVAWSMGV 68 (214)
T ss_pred CEEEEEEecCCCCHH-HHhhcc--CCCCCcEEEEeehhhcCc------ccch-------hh------hhhhhhhhhhHHH
Confidence 348899999998887 666554 44553 567888873311 1111 11 2567899999999
Q ss_pred HHHHHHHHhCccccccEEEecccc
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
.+|-++....+ +++.+.+++..
T Consensus 69 wvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCC
Confidence 99999988765 66666666543
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0064 Score=44.36 Aligned_cols=53 Identities=30% Similarity=0.159 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 114 TFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+.-+.+|..+++.+. ..++.++|||+|+.++-..+...+..++.+|+++++..
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 334566667766553 23699999999999999998886678999999988753
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0062 Score=47.69 Aligned_cols=103 Identities=19% Similarity=0.129 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCCC--CccccHHHHHHHhhcc----ceEEecCCCCC---CCCCCCCCCCChhHHHHHHHHHHHHh----
Q 020916 61 PSKPVVVLVHGFAA--EGIVTWQFQVGALTKK----YSVYIPDLLFF---GGSITDEADRSPTFQAQCLATGLAKL---- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~--~~~~~~~~~~~~l~~~----~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~l~~~l~~~---- 127 (320)
.+-|++++.||-.. +.. .++.+-..+.+. -.++.+|.--- ...-. ........+++++.-.++..
T Consensus 96 ~k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-CNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred ccccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-ccHHHHHHHHHHhhhhhhccCccc
Confidence 36789999998432 222 333333333333 45566654310 00000 00112222333333333322
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 128 -GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 128 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
....-+|.|.|+||.+++..+..+|+++-.++..++..
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 12356899999999999999999999999988888765
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00081 Score=47.52 Aligned_cols=36 Identities=22% Similarity=0.169 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
..+.+..+++.....++++.|||+||.+|..++...
T Consensus 50 ~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 50 ILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 345555555555556799999999999999888753
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0018 Score=43.18 Aligned_cols=48 Identities=19% Similarity=0.376 Sum_probs=29.4
Q ss_pred HhcCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHH
Q 020916 17 KMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQ 83 (320)
Q Consensus 17 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~ 83 (320)
....+....+++ +|..||+....++ .++..+|||+|||+++-. .|..+
T Consensus 64 ~lN~~phf~t~I-~g~~iHFih~rs~-----------------~~~aiPLll~HGWPgSf~-Ef~~v 111 (112)
T PF06441_consen 64 RLNSFPHFKTEI-DGLDIHFIHVRSK-----------------RPNAIPLLLLHGWPGSFL-EFLKV 111 (112)
T ss_dssp HHTTS-EEEEEE-TTEEEEEEEE--S------------------TT-EEEEEE--SS--GG-GGHHH
T ss_pred HHHcCCCeeEEE-eeEEEEEEEeeCC-----------------CCCCeEEEEECCCCccHH-hHHhh
Confidence 344677778888 6999999776652 246779999999999877 66554
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0019 Score=49.25 Aligned_cols=47 Identities=17% Similarity=0.067 Sum_probs=35.0
Q ss_pred HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC----ccccccEEEecccc
Q 020916 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY----PNLVQAMVVSGSIL 165 (320)
Q Consensus 118 ~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~~ 165 (320)
+-+..+++..+ +++.+.|||.||.+|..++... .++|.++...+++.
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 33444444444 4699999999999999999874 34788888888765
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0019 Score=49.72 Aligned_cols=38 Identities=18% Similarity=0.367 Sum_probs=34.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+.++-.++|||+||.+++.....+|+.+...++++|..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34568999999999999999999999999999999875
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.008 Score=50.52 Aligned_cols=105 Identities=16% Similarity=0.026 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHH-------------------hhccceEEecC-CCCCCCCCCCC--CCCChhHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGA-------------------LTKKYSVYIPD-LLFFGGSITDE--ADRSPTFQAQC 119 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~-------------------l~~~~~vi~~d-~~G~G~s~~~~--~~~~~~~~~~~ 119 (320)
++|.|+++.|.++++. .|..+.+. +...-.++.+| .-|.|.|.... ...+.....+|
T Consensus 100 ~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 5899999999999998 77766431 11124688899 66888887522 22333333444
Q ss_pred HHHHHHH-------hC--CCcEEEEEeChhHHHHHHHHHhCcc---ccccEEEecccccc
Q 020916 120 LATGLAK-------LG--VDKCVLVGFSYGGMVSFKVAELYPN---LVQAMVVSGSILAM 167 (320)
Q Consensus 120 l~~~l~~-------~~--~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 167 (320)
+..+.+. .. ..+.+|+|-|+||.-+..+|...-+ ..++++++.+....
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlig 238 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIG 238 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeec
Confidence 4444332 22 2489999999999999988865433 35667666655443
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.077 Score=43.20 Aligned_cols=238 Identities=14% Similarity=0.077 Sum_probs=117.4
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhC--CCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLG--VDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~--~~~~~lvGh 137 (320)
...+||++=||.+............+.+. +.++.+-.|-+-..-... ...+......-+.+++...+ ..++++--.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 44456666677766651333444445454 788887777543322211 22444455566677776655 456777789
Q ss_pred ChhHHHHHHHH-H---hC-c---cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 138 SYGGMVSFKVA-E---LY-P---NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 138 S~Gg~~a~~~a-~---~~-p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
|+||...+... . ++ | +...+++....+................ ........+.+..........+
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~-------~~~~~~~~~~~~~~~i~~~~~~ 189 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSS-------PPDDYVARWARLNYHITLLTMA 189 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceecccc-------CchhhHHHHHhcCeEEEEEEee
Confidence 99988776544 1 12 2 2355666666554322211111110000 0000000000000000000000
Q ss_pred CC---chhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEE
Q 020916 210 FP---SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQG 284 (320)
Q Consensus 210 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~ 284 (320)
.. .......+....... ...++..+.. .-.....+.+.+.+..|.++|.+..+.+.+... +.+++.+-
T Consensus 190 ~~~~~~~~~~~~~~~~~~~r--~~~~~~r~~~-----~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~ 262 (350)
T KOG2521|consen 190 GNEGGAYLLGPLAEKISMSR--KYHFLDRYEE-----QRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVK 262 (350)
T ss_pred ecccchhhhhhhhhcccccc--chHHHHHHHh-----hhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEee
Confidence 00 001111111100000 0000110000 111123457888899999999999888865554 23566666
Q ss_pred ecCCCccccc-CChHHHHHHHHHHHHhhhh
Q 020916 285 IKKAGHLVHL-ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 285 ~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 313 (320)
+.++-|..++ ..|..+.+...+|++....
T Consensus 263 ~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 263 FKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred ccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 7789999886 4899999999999998764
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0032 Score=48.74 Aligned_cols=24 Identities=25% Similarity=0.228 Sum_probs=20.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 345799999999999999888753
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0049 Score=53.06 Aligned_cols=83 Identities=17% Similarity=0.233 Sum_probs=52.5
Q ss_pred cHHHHHHHhhcc-ce-----EEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHH
Q 020916 79 TWQFQVGALTKK-YS-----VYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 79 ~~~~~~~~l~~~-~~-----vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a 148 (320)
.|..+++.|.+. |. ...+|+| .+. .....-+.+...+..+|+.. +-++++|+||||||.+++.+.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~--~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWR---LSF--QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccc---cCc--cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 678899988765 53 4444555 111 10111234444555555533 357899999999999999987
Q ss_pred HhCc---------------cccccEEEeccccc
Q 020916 149 ELYP---------------NLVQAMVVSGSILA 166 (320)
Q Consensus 149 ~~~p---------------~~v~~lvl~~~~~~ 166 (320)
.... ..|+++|.++++..
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccccC
Confidence 6321 24889999988754
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.003 Score=52.43 Aligned_cols=83 Identities=18% Similarity=0.188 Sum_probs=51.8
Q ss_pred cHHHHHHHhhcc-ce------EEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH----HhCCCcEEEEEeChhHHHHHHH
Q 020916 79 TWQFQVGALTKK-YS------VYIPDLLFFGGSITDEADRSPTFQAQCLATGLA----KLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 79 ~~~~~~~~l~~~-~~------vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
.|..+++.|..- |. -..+|+|- |. ......+.+...+...++ .-+.+|++||+||||+.+.+.+
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~--~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRL---SY--HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhh---cc--CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 677777777653 33 45567662 11 111122333444444443 3355899999999999999999
Q ss_pred HHhCcc--------ccccEEEeccccc
Q 020916 148 AELYPN--------LVQAMVVSGSILA 166 (320)
Q Consensus 148 a~~~p~--------~v~~lvl~~~~~~ 166 (320)
...+++ .|++.+-++++..
T Consensus 200 l~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 200 LKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HhcccccchhHHHHHHHHHHccCchhc
Confidence 988776 3666666665543
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.34 Score=41.01 Aligned_cols=109 Identities=19% Similarity=0.228 Sum_probs=67.9
Q ss_pred cceEEEeeccCCCCCeEEEEcCCCCCccccHH--HHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh
Q 020916 50 EKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ--FQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL 127 (320)
Q Consensus 50 ~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~--~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~ 127 (320)
.+.+++...++-..|..|..-|+-. +. -|+ .+++.|.. =-.+.-|.|=-|.+--.....--+...+-|.+.++.|
T Consensus 276 eEi~yYFnPGD~KPPL~VYFSGyR~-aE-GFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~L 352 (511)
T TIGR03712 276 QEFIYYFNPGDFKPPLNVYFSGYRP-AE-GFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYL 352 (511)
T ss_pred CeeEEecCCcCCCCCeEEeeccCcc-cC-cchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHh
Confidence 3455555556667788899999865 33 333 34455543 2334447776555532222212334566777888888
Q ss_pred CCC--cEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 128 GVD--KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 128 ~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
+.+ .++|-|-|||..-|+.+++... ..++|+--|
T Consensus 353 gF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKP 388 (511)
T TIGR03712 353 GFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKP 388 (511)
T ss_pred CCCHHHeeeccccccchhhhhhcccCC--CceEEEcCc
Confidence 864 5999999999999999998753 345554433
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.018 Score=46.95 Aligned_cols=86 Identities=26% Similarity=0.199 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVG 136 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvG 136 (320)
+...-||+-|=|+-.. .=+.+.++|.+. +.|+.+|-.=|=.| ..+.+..++|+..+++.. +..++.|+|
T Consensus 259 sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW~-----~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFWS-----ERTPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhhc-----cCCHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 3445667767665555 556678899888 99999995433333 357788899999988765 567899999
Q ss_pred eChhHHHHHHHHHhCcc
Q 020916 137 FSYGGMVSFKVAELYPN 153 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~ 153 (320)
+|+|+-+.-..-.+.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999988776666554
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0073 Score=45.06 Aligned_cols=68 Identities=16% Similarity=0.073 Sum_probs=44.8
Q ss_pred HHHhhccceEEecCCCCCCCCCCC-----C----CCCChhHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhC
Q 020916 84 VGALTKKYSVYIPDLLFFGGSITD-----E----ADRSPTFQAQCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 84 ~~~l~~~~~vi~~d~~G~G~s~~~-----~----~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
+..|....+|++|-+|--...... . ......+..+....+|++.+. ++++|+|||.|+.++.++..++
T Consensus 39 as~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 344555588999988853222211 0 112334445556666777754 5899999999999999999874
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.027 Score=45.34 Aligned_cols=64 Identities=13% Similarity=0.141 Sum_probs=50.9
Q ss_pred CCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 246 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.++..|-.++.+..|.++.++.+..+.+.+| +...+..+|+..|... +..+.+.+..|+.+...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LP-G~kaLrmvPN~~H~~~---n~~i~esl~~flnrfq~ 389 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLP-GEKALRMVPNDPHNLI---NQFIKESLEPFLNRFQM 389 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCC-CceeeeeCCCCcchhh---HHHHHHHHHHHHHHHhc
Confidence 5677889999999999999999999999999 5667889999999765 34455666667766554
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0043 Score=50.51 Aligned_cols=87 Identities=23% Similarity=0.255 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCCC-CccccHHHHHHHhhccceEEecCCCCCCCCCCCCC---CCChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 61 PSKPVVVLVHGFAA-EGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEA---DRSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 61 ~~~~~vv~lhG~~~-~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
+++-.||+.||+-+ +.. .|...+......+.=..+..+|+-....... ..--...++++.+.+....++++..+|
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvg 156 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVG 156 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeee
Confidence 45679999999988 445 7777777766662222333333322221111 111223355555555555678999999
Q ss_pred eChhHHHHHHHH
Q 020916 137 FSYGGMVSFKVA 148 (320)
Q Consensus 137 hS~Gg~~a~~~a 148 (320)
||+||.++..+.
T Consensus 157 hSLGGLvar~AI 168 (405)
T KOG4372|consen 157 HSLGGLVARYAI 168 (405)
T ss_pred eecCCeeeeEEE
Confidence 999999887554
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.033 Score=49.31 Aligned_cols=103 Identities=17% Similarity=0.063 Sum_probs=58.2
Q ss_pred CCeEEEEcCCCCCcc--ccHHH--HHHHhhcc-ceEEecCCC----CCCCCC--CCCCCCChhHHHHHHHHH---HHHhC
Q 020916 63 KPVVVLVHGFAAEGI--VTWQF--QVGALTKK-YSVYIPDLL----FFGGSI--TDEADRSPTFQAQCLATG---LAKLG 128 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~--~~~~~--~~~~l~~~-~~vi~~d~~----G~G~s~--~~~~~~~~~~~~~~l~~~---l~~~~ 128 (320)
.|++|++||.+.... ..+.. ....+..+ .-|+.+.+| |+.... .......+.++...+..+ |...+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 699999999864322 02211 11222332 667777776 222221 123445555555444443 44444
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 129 --VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 129 --~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
.+++.|+|||.||..+..+...- ...+.++|..++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 46799999999999998776421 23456666665544
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0098 Score=49.78 Aligned_cols=33 Identities=30% Similarity=0.327 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 117 ~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
.+.+.+++......++++.|||+||.+|..+|.
T Consensus 265 ~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344555555545557999999999999998764
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.011 Score=49.58 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
..+.+.++++.....++++.|||+||.+|..+|.
T Consensus 270 i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 4556677777666668999999999999998875
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.013 Score=43.22 Aligned_cols=74 Identities=20% Similarity=0.090 Sum_probs=41.9
Q ss_pred ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH----HhCCCcEEEEEeChhHHHHHHHHHh------CccccccEEE
Q 020916 91 YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA----KLGVDKCVLVGFSYGGMVSFKVAEL------YPNLVQAMVV 160 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~lvGhS~Gg~~a~~~a~~------~p~~v~~lvl 160 (320)
..+..+++|--.... .-..+...=+.++...++ .-...+++|+|+|.||.++..++.. ..++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 677777777422211 000122222333444443 3344689999999999999999877 2357889998
Q ss_pred eccccc
Q 020916 161 SGSILA 166 (320)
Q Consensus 161 ~~~~~~ 166 (320)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 887654
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0094 Score=49.39 Aligned_cols=36 Identities=14% Similarity=0.036 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHh
Q 020916 115 FQAQCLATGLAKLGVD--KCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 115 ~~~~~l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 150 (320)
++.+++..+++..... ++++.|||+||.+|+..|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4456666666655432 68999999999999998864
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.011 Score=48.97 Aligned_cols=32 Identities=22% Similarity=0.153 Sum_probs=22.6
Q ss_pred HHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHh
Q 020916 119 CLATGLAKLGVD--KCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 119 ~l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.+..+++..... ++++.|||+||.+|+..|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444443333 39999999999999999854
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.059 Score=42.65 Aligned_cols=129 Identities=18% Similarity=0.144 Sum_probs=83.8
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHH------h-------hcc
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA------L-------TKK 90 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~------l-------~~~ 90 (320)
.++++.++..+.+|.+....+- ...+|..+.+.|.++.+..-|..+-+. + -+.
T Consensus 6 g~v~vr~~a~~F~wly~~~~~~--------------ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~ 71 (414)
T KOG1283|consen 6 GYVDVRTGAHMFWWLYYATANV--------------KSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD 71 (414)
T ss_pred cceeeecCceEEEEEeeecccc--------------ccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh
Confidence 3566777888888877643221 136788999999876655233333211 1 122
Q ss_pred ceEEecCCC-CCCCCCCCCCC---CChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhCcc------
Q 020916 91 YSVYIPDLL-FFGGSITDEAD---RSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELYPN------ 153 (320)
Q Consensus 91 ~~vi~~d~~-G~G~s~~~~~~---~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~p~------ 153 (320)
..++.+|.| |-|.|--.... .+..+.+.|+.++++.+ .-.|++|+.-|+||-+|..++...-+
T Consensus 72 adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~ 151 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGE 151 (414)
T ss_pred ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCc
Confidence 567777766 67777543322 34566788999998865 33589999999999999998865322
Q ss_pred ---ccccEEEeccccc
Q 020916 154 ---LVQAMVVSGSILA 166 (320)
Q Consensus 154 ---~v~~lvl~~~~~~ 166 (320)
.+.+++|-++...
T Consensus 152 i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 152 IKLNFIGVALGDSWIS 167 (414)
T ss_pred eeecceeEEccCcccC
Confidence 2556777666554
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.017 Score=47.23 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCC--cEEEEEeChhHHHHHHHHHhC
Q 020916 117 AQCLATGLAKLGVD--KCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 117 ~~~l~~~l~~~~~~--~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+.+..+++..... ++++.|||+||.+|..+|...
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 45556666655433 589999999999999988653
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.028 Score=45.71 Aligned_cols=39 Identities=28% Similarity=0.392 Sum_probs=31.6
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEeccccc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILA 166 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 166 (320)
+.+|+.|||||+|+.+....+....+ .|+.+++++++..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 66789999999999999988765444 3888999987663
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.034 Score=46.12 Aligned_cols=35 Identities=17% Similarity=0.058 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+.+..+++... ..++.+.|||+||.+|+..|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 4455666665542 1368999999999999988854
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.032 Score=39.72 Aligned_cols=102 Identities=8% Similarity=0.038 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCCCCccccHHH------HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHH---HH-HHHHHHhCCC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQF------QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ---CL-ATGLAKLGVD 130 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~------~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~---~l-~~~l~~~~~~ 130 (320)
.+.+||+.+-.++.-. .|.. +++.+.+. .+.++++ |...-+.........+.++ .. .-+++..-..
T Consensus 25 aG~pVvvFpts~Grf~-eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH~AyerYv~eEalpg 101 (227)
T COG4947 25 AGIPVVVFPTSGGRFN-EYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERHRAYERYVIEEALPG 101 (227)
T ss_pred CCCcEEEEecCCCcch-hhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 4556666666666555 4543 34555555 5666655 2211111111122222222 12 2223333345
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
..++-|.||||..|..+.-++|+...++|.+++...
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 677889999999999999999999999999987763
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.023 Score=46.64 Aligned_cols=104 Identities=20% Similarity=0.167 Sum_probs=79.1
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCC---CChhHHHHHHHHHHHHhC---CCcEE
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEAD---RSPTFQAQCLATGLAKLG---VDKCV 133 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~---~~~~~~~~~l~~~l~~~~---~~~~~ 133 (320)
..++|+|+..-|.+.+...........|. -+-+.+++|-+|.|.+...+ .++.+-+.|...+++.++ .++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 34679999999998765422233333333 57788999999999876644 567777889888887774 36788
Q ss_pred EEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 134 LVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
--|-|-||+.++.+=.-+|+.|++.|.--++.
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 88999999999998888999999988765554
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.027 Score=47.79 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 116 ~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
....+..+++.....++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 4455666666665568999999999999998874
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.032 Score=46.32 Aligned_cols=34 Identities=21% Similarity=0.073 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHh
Q 020916 117 AQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 117 ~~~l~~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.+.+..+++.... -++++.|||+||.+|+..|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4456666665542 258999999999999988854
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.028 Score=41.15 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=46.2
Q ss_pred CcEEEEecCCCCCCCHHHHHHHH---HHhCCCCeEEEEecCCCcccccCCh---HHHHHHHHHHHHh
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMK---EQLGADHVTFQGIKKAGHLVHLERP---CAYNRCLKQFLAS 310 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 310 (320)
++++-|-|+.|.++.+.+..... ..++......++.+|+||+-.+.-+ +++.-.|.+|+.+
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 56778999999999877655544 4445445567888899999876543 7888899999875
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.042 Score=46.66 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+.+..+++.... .++++.|||+||.+|...|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34455666655432 258999999999999988864
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.04 Score=46.97 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLGV-----DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
....+..+++.... -++++.|||+||.+|+..|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455566655432 379999999999999998853
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.04 Score=46.91 Aligned_cols=35 Identities=14% Similarity=0.076 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+++..+++... ..++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456667766553 1359999999999999988854
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.05 Score=46.37 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHH
Q 020916 116 QAQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 116 ~~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+...+..+++... .-++++.|||+||.+|+..|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 4455666665542 126999999999999998885
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.059 Score=45.89 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHh
Q 020916 116 QAQCLATGLAKLGV-----DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 116 ~~~~l~~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
....+..+++.... .++.+.|||+||.+|+..|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34455555554431 269999999999999998853
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.11 Score=42.72 Aligned_cols=37 Identities=16% Similarity=-0.023 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 114 ~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4566777777877776679999999999999988864
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.12 Score=44.91 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=18.3
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 020916 130 DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 379999999999999988754
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.5 Score=40.90 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=48.7
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhC----C------CCeEEEEecCCCcccccC--ChHHHHHHHHHHHHhhhhc
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLG----A------DHVTFQGIKKAGHLVHLE--RPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~~~ 314 (320)
-.+++.||-.|+++|+.....+++++. . .-.++..+||.+|+.--. .+-.....|.+|+++-..+
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 479999999999999877666655542 1 235788999999997643 4456788899999876544
|
It also includes several bacterial homologues of unknown function. |
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=91.51 E-value=5.2 Score=33.38 Aligned_cols=37 Identities=27% Similarity=0.391 Sum_probs=25.0
Q ss_pred CCcEEEEEeChhHHHHHHHHHh----CccccccEEEecccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAEL----YPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lvl~~~~~ 165 (320)
.++++|-|.|.||.-++..+.. .|..++-..+.++..
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 4679999999999998876643 454444444455544
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.32 Score=42.03 Aligned_cols=102 Identities=17% Similarity=0.124 Sum_probs=58.4
Q ss_pred CCCCCeEEEEcCCCC---CccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH---HhC--C
Q 020916 60 KPSKPVVVLVHGFAA---EGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA---KLG--V 129 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~---~~~--~ 129 (320)
..++-.|+-+||.|. ++. .-+...+.++.. ..|+.+|+.---+.+ .+...++..-....+|+ .+| .
T Consensus 393 p~S~sli~HcHGGGfVAqsSk-SHE~YLr~Wa~aL~cPiiSVdYSLAPEaP---FPRaleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 393 PRSRSLIVHCHGGGFVAQSSK-SHEPYLRSWAQALGCPIISVDYSLAPEAP---FPRALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred CCCceEEEEecCCceeeeccc-cccHHHHHHHHHhCCCeEEeeeccCCCCC---CCcHHHHHHHHHHHHhcCHHHhCccc
Confidence 346668888999874 333 344444444444 889999975322221 12233333333333343 334 3
Q ss_pred CcEEEEEeChhHHHHHHHHHh----CccccccEEEecccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAEL----YPNLVQAMVVSGSIL 165 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lvl~~~~~ 165 (320)
++++++|-|.||.+.+-.+.+ .-.-.+|+++.-++.
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 689999999999876665543 111246777765553
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=91.12 E-value=2.7 Score=27.55 Aligned_cols=82 Identities=16% Similarity=0.186 Sum_probs=54.2
Q ss_pred cHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCCh-hHHHHHHHHHHHHhCCCcEEEEEeChhH--HHHHHHHHhCccc
Q 020916 79 TWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSP-TFQAQCLATGLAKLGVDKCVLVGFSYGG--MVSFKVAELYPNL 154 (320)
Q Consensus 79 ~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~lvGhS~Gg--~~a~~~a~~~p~~ 154 (320)
.|..+.+.+..+ +..=.+.++..|.+......... +.-...+..+++.....++++||-|--. -+-..+|.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 556666677665 66555666666554322211122 3556778888888888899999988643 3444677889999
Q ss_pred cccEEE
Q 020916 155 VQAMVV 160 (320)
Q Consensus 155 v~~lvl 160 (320)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 988764
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.54 Score=36.78 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=22.4
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 125 AKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 125 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.....++.|-|||+||.+|..+..++.
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 271 RIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhccccC
Confidence 3334467999999999999999988774
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.54 Score=36.78 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=22.4
Q ss_pred HHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 125 AKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 125 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+.....++.|-|||+||.+|..+..++.
T Consensus 271 ~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 271 RIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HhCCCceEEEeccccchHHHHHhccccC
Confidence 3334467999999999999999988774
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=90.54 E-value=1.6 Score=33.64 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=28.4
Q ss_pred CChhHHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 111 RSPTFQAQCLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 111 ~~~~~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+...=++.+.+.++.. .-++++++|+|+|+.++...+.+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 34444455565555542 236899999999999999887654
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.60 E-value=0.74 Score=40.06 Aligned_cols=53 Identities=19% Similarity=0.216 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHh-----Ccc------ccccEEEecccc
Q 020916 113 PTFQAQCLATGLAKLG---VDKCVLVGFSYGGMVSFKVAEL-----YPN------LVQAMVVSGSIL 165 (320)
Q Consensus 113 ~~~~~~~l~~~l~~~~---~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~~ 165 (320)
.......+.+.+.+.+ .++++.+||||||.++=.+... .|+ ...|+|+++.+.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3333445555555544 3579999999999988766543 232 256777777653
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.92 E-value=0.79 Score=39.10 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=32.5
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhC-----ccccccEEEecccccc
Q 020916 126 KLGVDKCVLVGFSYGGMVSFKVAELY-----PNLVQAMVVSGSILAM 167 (320)
Q Consensus 126 ~~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~ 167 (320)
..|.+|+.|||+|+|+.+....+... -..|..+++++++...
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 34778999999999999999776532 2358889999987744
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=85.92 E-value=1.5 Score=38.05 Aligned_cols=83 Identities=17% Similarity=0.214 Sum_probs=55.9
Q ss_pred HHHHhhccceEEecCCCCCCCCCC---CCCCCChhHH-----------HHHHHHHHHHh---CCCcEEEEEeChhHHHHH
Q 020916 83 QVGALTKKYSVYIPDLLFFGGSIT---DEADRSPTFQ-----------AQCLATGLAKL---GVDKCVLVGFSYGGMVSF 145 (320)
Q Consensus 83 ~~~~l~~~~~vi~~d~~G~G~s~~---~~~~~~~~~~-----------~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~ 145 (320)
+...+...|.++.=|- ||..+.. .....+.+.+ +.--+++++.. ..+.-+..|.|.||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4566777799999986 6655543 1111222221 11222333332 345688999999999999
Q ss_pred HHHHhCccccccEEEeccccc
Q 020916 146 KVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 146 ~~a~~~p~~v~~lvl~~~~~~ 166 (320)
..|+++|+..++++.-+|...
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHhChhhcCeEEeCCchHH
Confidence 999999999999999888765
|
It also includes several bacterial homologues of unknown function. |
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
Probab=83.73 E-value=5.6 Score=44.62 Aligned_cols=98 Identities=17% Similarity=-0.002 Sum_probs=68.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~G 140 (320)
..+.+++.|...++.. .+..+...|.....++.+..++.-.... ...++..++....+.+.... ..+..+.|+|+|
T Consensus 3691 ~~~~l~~~h~~~r~~~-~~~~l~~~l~~~~~~~~l~~~~~~~d~~--~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVF-DYEPLAVILEGDRHVLGLTCRHLLDDGW--QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cccceeeechhhcchh-hhHHHHHHhCCCCcEEEEeccccccccC--CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 3456999999998888 8888888887777888887765422221 23455666666666666554 357999999999
Q ss_pred HHHHHHHHHh---CccccccEEEec
Q 020916 141 GMVSFKVAEL---YPNLVQAMVVSG 162 (320)
Q Consensus 141 g~~a~~~a~~---~p~~v~~lvl~~ 162 (320)
|.++..++.. ..+.+.-+.+++
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999988764 334455555554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 320 | ||||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 8e-08 | ||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 3e-07 | ||
| 3pdc_A | 344 | Crystal Structure Of Hydrolase Domain Of Human Solu | 1e-05 | ||
| 3ans_A | 336 | Human Soluble Epoxide Hydrolase In Complex With A S | 1e-05 | ||
| 1s8o_A | 555 | Human Soluble Epoxide Hydrolase Length = 555 | 1e-05 | ||
| 2og1_A | 286 | Crystal Structure Of Bphd, A C-C Hydrolase From Bur | 3e-05 | ||
| 2puh_A | 286 | Crystal Structure Of The S112a Mutant Of A C-C Hydr | 6e-05 | ||
| 2rht_A | 283 | Crystal Structure Of The S112a Mutant Of A C-C Hydr | 6e-05 | ||
| 3v1k_A | 286 | Crystal Structure Of The H265q Mutant Of A C-C Hydr | 2e-04 | ||
| 1cqz_A | 554 | Crystal Structure Of Murine Soluble Epoxide Hydrola | 3e-04 | ||
| 3v1l_A | 286 | Crystal Structure Of The S112aH265Q MUTANT OF A C-C | 5e-04 | ||
| 1u2e_A | 289 | Crystal Structure Of The C-C Bond Hydrolase Mhpc Le | 7e-04 |
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor Length = 344 | Back alignment and structure |
|
| >pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A Synthetic Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase Length = 555 | Back alignment and structure |
|
| >pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From Burkholderia Xenovorans Lb400 Length = 286 | Back alignment and structure |
|
| >pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In Complex With Its Substrate Hopda Length = 286 | Back alignment and structure |
|
| >pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In Complex With 3-Cl Hopda Length = 283 | Back alignment and structure |
|
| >pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400. Length = 286 | Back alignment and structure |
|
| >pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase. Length = 554 | Back alignment and structure |
|
| >pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400 Length = 286 | Back alignment and structure |
|
| >pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc Length = 289 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-40
Identities = 52/268 (19%), Positives = 101/268 (37%), Gaps = 24/268 (8%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS-ITDEADRSPTFQAQ 118
+ V+V +HGF ++ T+ + T Y V DL G + + + +
Sbjct: 13 VETNQVLVFLHGFLSDS-RTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITT 71
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
L L K L G+S GG V+ A + +++ + + + N+ L R
Sbjct: 72 LLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQ--LER 129
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKER-AELLEGLL 237
V + +L G++ V ++KL + +E+ R++R ++ +
Sbjct: 130 RLVDDARAKVLDI--AGIELF--VNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMA 185
Query: 238 ISNKD----------PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIK 286
+ +D P + +L GE D+ F V++A M + + I
Sbjct: 186 KALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKF-VQIAKKMANLIPNSKCKL---IS 241
Query: 287 KAGHLVHLERPCAYNRCLKQFLASLHAD 314
GH +H+E ++ + FL D
Sbjct: 242 ATGHTIHVEDSDEFDTMILGFLKEEQND 269
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 5e-39
Identities = 46/255 (18%), Positives = 90/255 (35%), Gaps = 18/255 (7%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS-ITDEADRSPTFQAQC 119
P +VL+HG W + + KY Y D++ I + + T A
Sbjct: 65 EDAPPLVLLHGALF-SSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANW 123
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179
L LG++K ++G S GG+ + P V++ + ++ L
Sbjct: 124 LLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYAL 183
Query: 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKER--AELLEGLL 237
G+++S G++ L+ + K F + R +G
Sbjct: 184 GLTAS---------NGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFP 234
Query: 238 ISNKDPTVPNFPQRVHLLWGEDDQIFN-VELAHNMKEQL-GADHVTFQGIKKAGHLVHLE 295
D + + + LL GE + I++ H + + + AGH++ +E
Sbjct: 235 YVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKN---AGHVLSME 291
Query: 296 RPCAYNRCLKQFLAS 310
+P N + +F +
Sbjct: 292 QPTYVNERVMRFFNA 306
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 5e-39
Identities = 34/258 (13%), Positives = 87/258 (33%), Gaps = 17/258 (6%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTK--KYSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
++ +HG + + L+ +Y DL G S S +
Sbjct: 22 TPIIFLHGLSL-DKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIE 80
Query: 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV 181
+G + +L G SYGG ++ +A + + ++ ++ S + +
Sbjct: 81 AIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHS--KRLTGKHIN 138
Query: 182 SSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNK 241
++ + + LS+ + + D+ ++ ++ + L +N
Sbjct: 139 ILEEDINPVENKEYFADFLSMNVI----INNQAWHDYQNLIIPGLQKEDKTFIDQLQNNY 194
Query: 242 DPTV------PNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE 295
T N+ ++ G +DQ+ + + ++ + + GH + ++
Sbjct: 195 SFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHN--ENGEIVLLNRTGHNLMID 252
Query: 296 RPCAYNRCLKQFLASLHA 313
+ A FL L++
Sbjct: 253 QREAVGFHFDLFLDELNS 270
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 7e-38
Identities = 50/260 (19%), Positives = 97/260 (37%), Gaps = 17/260 (6%)
Query: 61 PSKPVVVLVHGFA--AEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSIT-DEADRSPTFQ 116
VVL+HG A G + + L + Y V + D +G S + +
Sbjct: 34 QGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLN 93
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
A+ L + + +L + K L+G S GG S +P V +V+ G +
Sbjct: 94 ARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTP--M 151
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGL 236
G+ ++L +++ LK ++ + + L++ L M + R ++ L
Sbjct: 152 PTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSL 211
Query: 237 LISNKDPTVPNFPQRVH-------LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAG 289
P+F R+ ++WG +D+ ++ + + + G
Sbjct: 212 E--ANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGI--AGSELHIFRDCG 267
Query: 290 HLVHLERPCAYNRCLKQFLA 309
H E A+N+ + FLA
Sbjct: 268 HWAQWEHADAFNQLVLNFLA 287
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 3e-37
Identities = 51/263 (19%), Positives = 100/263 (38%), Gaps = 22/263 (8%)
Query: 61 PSKPVVVLVHGFA--AEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRS-PTFQA 117
+ VVL+HG A + + L + + V D +G S + A
Sbjct: 34 GNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAA 93
Query: 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
L +LG+ + LVG + GG + + A YP +V+ G ++ ++ +
Sbjct: 94 MALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPG-GLSINLFAPDPT 152
Query: 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFA--NRKERAELLEG 235
GV S+ + + + L+A L V Y + + + ++ FA + E
Sbjct: 153 E-GVKRLSKFSVAPTRENLEAFLRVMVYD----KNLITPELVDQRFALASTPESLTATRA 207
Query: 236 LLIS--NKDPTVPNFPQRVH-------LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIK 286
+ S D + V+ L+WG +D++ ++ A + +
Sbjct: 208 MGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTI--PRAQLHVFG 265
Query: 287 KAGHLVHLERPCAYNRCLKQFLA 309
+ GH V +E+ +N+ +FL
Sbjct: 266 QCGHWVQVEKFDEFNKLTIEFLG 288
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 5e-37
Identities = 56/271 (20%), Positives = 94/271 (34%), Gaps = 34/271 (12%)
Query: 61 PSKPVVVLVHGF--AAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS-----ITDEADRSP 113
P P VVL+HG A W+ + L + + V PDL+ FG S
Sbjct: 27 PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWV 86
Query: 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173
+ + + + G++K +VG S GG V+ ++ P + + GS+ A ++
Sbjct: 87 GMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPP 146
Query: 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL--------------YKDFL 219
L + + L+ Y FP +
Sbjct: 147 ELARLLA------FYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQ 200
Query: 220 EVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADH 279
EVMF + K E L T+ P V + G D+I ++ + + + L H
Sbjct: 201 EVMFESMKAGMESLVIP-----PATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL--KH 253
Query: 280 VTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
+ + GH LER A L + +
Sbjct: 254 AELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 6e-36
Identities = 50/263 (19%), Positives = 100/263 (38%), Gaps = 22/263 (8%)
Query: 62 SKPVVVLVHGFA--AEGIVTWQFQVGALTKKYSVYIPDLLFFGGSIT-DEADRSPTFQAQ 118
V+L+HG W+ + AL+K Y V PD++ FG + + + S
Sbjct: 24 EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVD 83
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
+ + L ++K +VG ++GG ++ A Y V MV+ G+ D LN
Sbjct: 84 HIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEG--LNA 141
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVM--------FANRKERA 230
+ S++ ++ LL + Y + L + E F++
Sbjct: 142 V-------WGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEP 194
Query: 231 ELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290
+++ D + P ++ G +DQ+ + + + E + D + GH
Sbjct: 195 RQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI--DRAQLHVFGRCGH 252
Query: 291 LVHLERPCAYNRCLKQFLASLHA 313
+E+ +NR + +F +
Sbjct: 253 WTQIEQTDRFNRLVVEFFNEANT 275
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 2e-35
Identities = 48/258 (18%), Positives = 87/258 (33%), Gaps = 19/258 (7%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVG----ALTKKYSVYIPDLLFFGGSITDEADR-SPTFQAQ 118
V+++HG G W + Y V + D F S D A+
Sbjct: 34 ETVIMLHGGGP-GAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNAR 92
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
+ + L +D+ LVG + GG + A YP+ + +++ G + S+ +
Sbjct: 93 AVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPG-GLGPSMFAP-MPM 150
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI 238
G+ +L S + LK +L V Y + L + E + + L
Sbjct: 151 EGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISA-- 208
Query: 239 SNKDPTVPNFPQRVH-------LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291
+ + R+ + WG DD+ ++ + + D K G
Sbjct: 209 QKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI--DDARLHVFSKCGAW 266
Query: 292 VHLERPCAYNRCLKQFLA 309
E +NR + FL
Sbjct: 267 AQWEHADEFNRLVIDFLR 284
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 3e-33
Identities = 43/256 (16%), Positives = 96/256 (37%), Gaps = 15/256 (5%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
+VL+HG+ V W+ L+ +++++ DL FG S +A
Sbjct: 13 NVHLVLLHGWGLNAEV-WRCIDEELSSHFTLHLVDLPGFGRS-----RGFGALSLADMAE 66
Query: 123 GLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVS 182
+ + DK + +G+S GG+V+ ++A +P V+A+V S + + ++
Sbjct: 67 AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLA 126
Query: 183 SSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL--ISN 240
+ L + + ++ L++ T + + + A ++L G L +
Sbjct: 127 GFQQQLSDDQQRTVERFLALQTMGTETARQ-DARALKKTVLALPMPEVDVLNGGLEILKT 185
Query: 241 KD--PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHLVHLERP 297
D + N L+G D + ++ + + ++ F A H + P
Sbjct: 186 VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAK---AAHAPFISHP 242
Query: 298 CAYNRCLKQFLASLHA 313
+ L + +
Sbjct: 243 AEFCHLLVALKQRVGS 258
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 7e-33
Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 28/259 (10%)
Query: 64 PVVVLVHGF--AAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
V+L+HG AE W+ + L + Y V D+L FG + + + + + + L
Sbjct: 37 QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLH 96
Query: 122 TGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
+ + D K +VG S GG V+ L+ LV A+V+ GS + I+E L +
Sbjct: 97 DFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA-GLVVEIHED-LRPI- 153
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKE---RAELLEGLL 237
+ + +G+ L+ T + + + + R + +
Sbjct: 154 ------INYDFTREGMVHLVKALTND----GFKIDDAMINSRYTYATDEATRKAYVATMQ 203
Query: 238 ISNKDPTVPNFPQRVH-------LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290
+ + P+ + ++ G+DD++ VE A+ + + D I GH
Sbjct: 204 WIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI--DDSWGYIIPHCGH 261
Query: 291 LVHLERPCAYNRCLKQFLA 309
+E P + FL+
Sbjct: 262 WAMIEHPEDFANATLSFLS 280
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 5e-32
Identities = 51/268 (19%), Positives = 83/268 (30%), Gaps = 27/268 (10%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSI-TDEADRSPTFQAQC 119
PVVVL+ G G W Q+ L ++Y V D G + T D S A
Sbjct: 13 ADAPVVVLISGLGGSG-SYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAE 71
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179
L L G++ +VG + G +V ++A YP V ++ L + R
Sbjct: 72 LHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRE 131
Query: 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKER---------- 229
LL + V +P+ + A
Sbjct: 132 ------RLLYSGGAQAW-----VEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNL 180
Query: 230 AELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKA 288
L L ++ V ++ DD + + + L + +
Sbjct: 181 LRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPY---G 237
Query: 289 GHLVHLERPCAYNRCLKQFLASLHADEQ 316
GH ++ P +N L LASL +
Sbjct: 238 GHACNVTDPETFNALLLNGLASLLHHRE 265
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-30
Identities = 31/270 (11%), Positives = 76/270 (28%), Gaps = 20/270 (7%)
Query: 51 KIIEKEALKKPSKPVVVLVHGFAAEG-IVTWQFQVGALTKKYSVYIPDLLFFGGS-ITDE 108
+ + P V + G + + L + D G S ++++
Sbjct: 29 LLGPIYTCHREGNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQ 88
Query: 109 ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV--SGSILA 166
A+ + +L S GG + ++ + +++
Sbjct: 89 ANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMI 148
Query: 167 MTDSINETNLNRLGVSSSSELLLPNSVKGLKAL----LSVATYKKLWFPSCLYKDFLEVM 222
+ +L + + + LK L S +K+LW + L +
Sbjct: 149 YRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDV 208
Query: 223 --FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280
+ K R L E + +P + + +E + + + +
Sbjct: 209 QSLPDFKIRLALGEEDFKTGISEKIP-----SIVFSESFREKEYLESEY-LNKHTQTKLI 262
Query: 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
H +H + ++Q L++
Sbjct: 263 LCGQ----HHYLHWSETNSILEKVEQLLSN 288
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 3e-30
Identities = 35/259 (13%), Positives = 87/259 (33%), Gaps = 19/259 (7%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P ++L+ G+ + +++ + L + V +P+ G S ++ D Q +
Sbjct: 25 TDGPAILLLPGWCHDH-RVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDA 83
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNRL 179
L +LGV+ + V S+GG V ++ E P ++ ++ +L L
Sbjct: 84 LEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLL 143
Query: 180 ----GVSSSSELLLPNSVKGLKALLSVATYKKLW--FPSCLYKDFLEVMFANRKERAELL 233
+ L + G + + + V+ +
Sbjct: 144 KDPERWREGTHGLFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPM 203
Query: 234 EGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHLV 292
+ + +N T P + ++ + + ++ + EQ + G H
Sbjct: 204 QMM--ANLTKTRP-----IRHIFSQPTEPEYEKINSDFAEQHPWFSYAKLGG---PTHFP 253
Query: 293 HLERPCAYNRCLKQFLASL 311
++ P +++F ++
Sbjct: 254 AIDVPDRAAVHIREFATAI 272
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 3e-30
Identities = 46/272 (16%), Positives = 81/272 (29%), Gaps = 46/272 (16%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ----AQ 118
K ++ GF + V W A + + V + D + G S D + AQ
Sbjct: 20 KASIMFAPGFGCDQSV-WNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQ 78
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
+ L + + V VG S G ++ + P L +V+ G +N+
Sbjct: 79 DVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCY---LNDPPEYY 135
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL- 237
G + GL ++ Y W F + +R E+ E L
Sbjct: 136 GGFEEE-------QLLGLLEMME-KNYIG-WA-----TVFAATVLNQP-DRPEIKEELES 180
Query: 238 ----------------ISNKD--PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GAD 278
D + +L DD I + M + L +
Sbjct: 181 RFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSS 240
Query: 279 HVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
+ GH H+ P + + +L +
Sbjct: 241 LKQMEA---RGHCPHMSHPDETIQLIGDYLKA 269
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 4e-30
Identities = 40/265 (15%), Positives = 92/265 (34%), Gaps = 26/265 (9%)
Query: 49 GEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE 108
+ K S ++ VHG + + L + Y+ + DL G S +
Sbjct: 2 NAMLHYVHVGNKKSPNTLLFVHGSGCNLKI-FGELEKYL-EDYNCILLDLKGHGES-KGQ 58
Query: 109 ADRSPTFQAQCLATGLAKLGV----DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI 164
+ +A + V L+G+S GG + VA V+ +V
Sbjct: 59 CPSTVYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGG 118
Query: 165 LAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL-WFPSCLYKDFLEVMF 223
A D +++ + ++ + L + G+ LS ++ L P + D +
Sbjct: 119 -ARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIMINDLIACKL 177
Query: 224 ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ 283
+ + + + +P V + +D+ + VE + +K+++ ++ +
Sbjct: 178 IDLVDNLKNI----------DIP-----VKAIVAKDELLTLVEYSEIIKKEV--ENSELK 220
Query: 284 GIKKAGHLVHLERPCAYNRCLKQFL 308
+ H + + +K F+
Sbjct: 221 IFETGKHFLLVVNAKGVAEEIKNFI 245
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 4e-30
Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 20/260 (7%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS--ITDEADRSPTFQAQCLA 121
P + + H ++ E T YSVY+ +L G S ++++ S T + L
Sbjct: 24 PPLCVTHLYS-EYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLE 82
Query: 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV 181
L ++K G S GGM++ A + ++V G A + + +
Sbjct: 83 AIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGG-AAASKEYASHKDSIYCSK 141
Query: 182 SSSSELLL--------PNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELL 233
+ ++ ++V+ + LS ++ ++ L++ + + L
Sbjct: 142 NVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLN 201
Query: 234 EGLLISNKDPTVPNFPQRVH----LLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKA 288
+ KD V + V + G+ D + + + A F +++
Sbjct: 202 YFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPNATLTKF---EES 258
Query: 289 GHLVHLERPCAYNRCLKQFL 308
H +E +N+ + L
Sbjct: 259 NHNPFVEEIDKFNQFVNDTL 278
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 6e-30
Identities = 40/276 (14%), Positives = 86/276 (31%), Gaps = 46/276 (16%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS--ITDEADRSPTFQ--A 117
+ V+L HGF + + W+F + L K+++V + D + G S + R + + A
Sbjct: 27 GEKTVLLAHGFGCDQNM-WRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYA 85
Query: 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
+ + L L + ++G S +++ + + + + + +N
Sbjct: 86 KDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCF---MNFPPDY 142
Query: 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL 237
G ++ L L+ Y ++ +EL+ L
Sbjct: 143 VGGFERD-------DLEELINLMD-KNYIG------WANYLAPLVMGAS-HSSELIGELS 187
Query: 238 --ISNKDPTV-----------------PNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GA 277
DP V + + D + + E+ M E + +
Sbjct: 188 GSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNS 247
Query: 278 DHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
Q GH +H+ L F+ +
Sbjct: 248 QLELIQA---EGHCLHMTDAGLITPLLIHFIQNNQT 280
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 6e-30
Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 15/254 (5%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATG 123
P+++ HG + ++ + L+ +++ D G S E A +A
Sbjct: 69 PLMLFFHGITSNS-AVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYADDIAGL 127
Query: 124 LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSS 183
+ L +LVG S G S A YP+LV+++V + + R+
Sbjct: 128 IRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVN--- 184
Query: 184 SSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL----EVMFANRKERAELLEGLLIS 239
+ L +K ++A L+ + + + A + +
Sbjct: 185 -AGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGL 243
Query: 240 NKD--PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHLVHLER 296
D P + + V ++ GE ++ + V G A H V+
Sbjct: 244 RSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPDLPVVVVPG---ADHYVNEVS 300
Query: 297 PCAYNRCLKQFLAS 310
P + + F+ +
Sbjct: 301 PEITLKAITNFIDA 314
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 3e-29
Identities = 55/278 (19%), Positives = 94/278 (33%), Gaps = 32/278 (11%)
Query: 59 KKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSIT-DEADRSPTFQ 116
KK + ++L+HG TW+ + L Y V D + F S S
Sbjct: 42 KKANGRTILLMHGKN-FCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQL 100
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
A L +LGV + ++G S GGM++ + A LYP V+ +V+ I + +
Sbjct: 101 AANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI--GLEDWKALGV 158
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL-YKDFLEVMFANRKERAELLEG 235
V L S +G++ Y W P + M+ + +
Sbjct: 159 PWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNS 218
Query: 236 LLISNKDPT------VPNFPQRVHLLWGEDDQIF----------------NVELAHNMKE 273
L + T + LL GE D +L +
Sbjct: 219 ALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAAR 278
Query: 274 QL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
++ A V F GH ++ P +++ L + L +
Sbjct: 279 RIPQATLVEFPD---LGHTPQIQAPERFHQALLEGLQT 313
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 5e-29
Identities = 53/253 (20%), Positives = 92/253 (36%), Gaps = 25/253 (9%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTF---Q 116
V+L+ G G + Q+ L KK ++V D +G S + D F
Sbjct: 21 EGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERD 80
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
A+ + L K L+G+S GG+ + A YP+ + MV+ G+ +TD +
Sbjct: 81 AKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYE 140
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGL 236
VS SE K L+AL + + E ++ L +G
Sbjct: 141 GIRDVSKWSERTR----KPLEALYGYDYFARTC----------EKWVDGIRQFKHLPDGN 186
Query: 237 LISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHLVHLE 295
+ +P ++ GE D + A + + + G+ H +HL
Sbjct: 187 IC---RHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPE---GKHNLHLR 240
Query: 296 RPCAYNRCLKQFL 308
+N+ + FL
Sbjct: 241 FADEFNKLAEDFL 253
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 8e-29
Identities = 46/259 (17%), Positives = 92/259 (35%), Gaps = 26/259 (10%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
KP++ L + + W Q+ ALT+ + V D G S + + +
Sbjct: 25 AEKPLLALSNSIGTTLHM-WDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDV 83
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
L L V + +G S GG+V +A P ++ +V++ + + + R+
Sbjct: 84 LELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPA--AQWDERIA 141
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFP-------SCLYKDFLEVMFANRKER-AEL 232
+E + A + WFP + + F ++ A + A
Sbjct: 142 AVLQAE--------DMSET--AAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGS 191
Query: 233 LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHL 291
+ ++ + + ++ G D + + + GA VT A HL
Sbjct: 192 FAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTL----PAVHL 247
Query: 292 VHLERPCAYNRCLKQFLAS 310
++E P A+ + FL +
Sbjct: 248 SNVEFPQAFEGAVLSFLGA 266
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 6e-27
Identities = 48/263 (18%), Positives = 96/263 (36%), Gaps = 26/263 (9%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQC 119
P+VVLVHG G WQ + L + + DL G + D +
Sbjct: 14 ARTPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEA-VEM 71
Query: 120 LATGLAKLGVD--KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
+ + +LVG+S GG + + +I+ + N
Sbjct: 72 IEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRG--AIIEGGHFGLQENEE 129
Query: 178 RLGVSSSSELLLPN-SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKER-----AE 231
+ + S + ++ +LS + ++ L + + + A R A
Sbjct: 130 KAARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSS--LNHEQRQTLIAQRSANLGSSVAH 187
Query: 232 LLEGLLISNKD---PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKA 288
+L ++ + P + +H + GE D F +LA + +++ + +A
Sbjct: 188 MLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-QQLAESS-------GLSYSQVAQA 239
Query: 289 GHLVHLERPCAYNRCLKQFLASL 311
GH VH E+P A+ + ++ + S+
Sbjct: 240 GHNVHHEQPQAFAKIVQAMIHSI 262
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-26
Identities = 45/266 (16%), Positives = 86/266 (32%), Gaps = 17/266 (6%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSP-TFQ--A 117
P + ++HG + + + + V D G S+ D T
Sbjct: 23 VEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALV 82
Query: 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
+ LGV++ L+ +G +V+ +V +P A++++ + L
Sbjct: 83 EDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAP-WVNFPWL--AARLA 139
Query: 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSC---LYKDFLEVMFANRKERAELLE 234
+ N + LK A + +L FP+ + ++L A L
Sbjct: 140 EAAGLAPLPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLA 199
Query: 235 GLLISNKDPTVPNFPQRVH----LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290
L + +L GE D + +L A AGH
Sbjct: 200 FLRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPYAEE-VASRLRAPIRVLPE---AGH 255
Query: 291 LVHLERPCAYNRCLKQFLASLHADEQ 316
+ ++ P A+ K+ LA+L +
Sbjct: 256 YLWIDAPEAFEEAFKEALAALVPALR 281
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-26
Identities = 45/258 (17%), Positives = 91/258 (35%), Gaps = 27/258 (10%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
+ P +VL + + + W QV AL+K + V D G S + + +
Sbjct: 24 GNAPWIVLSNSLGTDLSM-WAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDV 82
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
+ L + + G S GG+ +A + + ++ + + + + E + R
Sbjct: 83 LGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSP--EVWVPRAV 140
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPS-------CLYKDFLEVMFANRKER-AEL 232
+ + +G+ AL WF + + +V KE A
Sbjct: 141 KART---------EGMHAL--ADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASN 189
Query: 233 LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHL 291
E + ++ P P ++ G D + + + GA +V A H+
Sbjct: 190 CEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAGARYVELD----ASHI 245
Query: 292 VHLERPCAYNRCLKQFLA 309
++ER A+ + + FL
Sbjct: 246 SNIERADAFTKTVVDFLT 263
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-25
Identities = 44/272 (16%), Positives = 87/272 (31%), Gaps = 34/272 (12%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS--ITDEADRSPTFQAQ 118
S+P V+ + G ++ L + V P++ G S D P Q
Sbjct: 27 ISRPPVLCLPGLTRNAR-DFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQ 85
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
L LA+ G+++ V +G S GG+++ +A P + A V + + ++ L R
Sbjct: 86 DLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAV----LNDVGPEVSPEGLER 141
Query: 179 LGVSSSSELLLPNSVKGLKALLS-VATYKKLWFPSCLYKDFLEVMFANRKERAE------ 231
+ + + + + +P +L +
Sbjct: 142 IR----GYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFD 197
Query: 232 ----LLEGLLISNKDPTVPNFPQR--------VHLLWGEDDQIFNVELAHNMKEQLGADH 279
+ E + + +L GE I + + A M + G +
Sbjct: 198 YDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILSAQTAAKMASRPGVEL 257
Query: 280 VTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311
VT GH L+ P + + + L +
Sbjct: 258 VTLPR---IGHAPTLDEPESIAA-IGRLLERV 285
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 3e-24
Identities = 46/256 (17%), Positives = 80/256 (31%), Gaps = 25/256 (9%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTF----Q 116
+ +VLVHG L +++ D+ G S R P
Sbjct: 14 HNNSPIVLVHGLFGSLD-NLGVLARDLVNDHNIIQVDVRNHGLS-----PREPVMNYPAM 67
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
AQ L L L +DK +G S GG + L P+ + +V A D +
Sbjct: 68 AQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDI--APVDYHVRRHD 125
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGL 236
++ + + A++ FL + E + L
Sbjct: 126 EIFAAINAVSESDAQTRQQAAAIMRQ------HLNEEGVIQFL-LKSFVDGEWRFNVPVL 178
Query: 237 LISNKD----PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292
+P + + G + + + ++ Q I AGH V
Sbjct: 179 WDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF--PQARAHVIAGAGHWV 236
Query: 293 HLERPCAYNRCLKQFL 308
H E+P A R ++++L
Sbjct: 237 HAEKPDAVLRAIRRYL 252
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 2e-23
Identities = 49/259 (18%), Positives = 83/259 (32%), Gaps = 18/259 (6%)
Query: 64 PVVVLVHGFAAEGIVTWQFQV--GALTKKYSVYIPDLLFFGGSITDEADRSPTFQ--AQC 119
VV + G G W L Y D G + E T Q
Sbjct: 44 DPVVFIAGRGGAGRT-WHPHQVPAFLAAGYRCITFDNRGIGAT---ENAEGFTTQTMVAD 99
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179
A + L + +VG S G ++ ++ + P LV + V+ + + + N+
Sbjct: 100 TAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRA--RQFFNKA 157
Query: 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL-- 237
+ +A L +K D++ + + L L
Sbjct: 158 EAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDC 217
Query: 238 ISNKD--PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHLVHL 294
+ P N V ++ DD + L + + L ++ AGHL
Sbjct: 218 APQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPD---AGHLGFF 274
Query: 295 ERPCAYNRCLKQFLASLHA 313
ERP A N + +F AS+ A
Sbjct: 275 ERPEAVNTAMLKFFASVKA 293
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 2e-23
Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 16/256 (6%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P P + L+ G+ + ++ L + + V PD TD D AQ L
Sbjct: 19 PHAPTLFLLSGWCQDH-RLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLAQDL 77
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINET---NL 176
+ G+ +V S+G V+ V E + ++ +L +
Sbjct: 78 LAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQ 137
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKL--WFPSCLYKDFLEVMFANRKERAELLE 234
+ + + + + + WF +++ + AN + L+
Sbjct: 138 HPTEYVAGRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLD 197
Query: 235 GLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294
+ + P + + L + Q+ G H L
Sbjct: 198 RMDSLPQKPEICHIY--SQPLSQDYRQL----QLEFAAGHSWFHPRHIPG---RTHFPSL 248
Query: 295 ERPCAYNRCLKQFLAS 310
E P A + +++FL +
Sbjct: 249 ENPVAVAQAIREFLQA 264
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 5e-23
Identities = 45/284 (15%), Positives = 83/284 (29%), Gaps = 49/284 (17%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQF----QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ 116
V+ +HG T + + + + PDL+ G S + D
Sbjct: 30 RDGTPVLFLHGNP-----TSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDH 84
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
+ L + LG+++ VLV +G + F A+ P V+ + E
Sbjct: 85 VRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACM-----------EFIR 133
Query: 177 NRLGVSSSSEL------LLPNSVKGLKALLSVATYKKLWFPSCLYKDFL-EVM------F 223
E + G + ++ + + P C+ + M F
Sbjct: 134 PFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPF 193
Query: 224 ANRKERAELLE---GLLISNKDPT-VPNFPQ----------RVHLLWGEDDQIFNVELAH 269
+R L L I+ + V L WG + A
Sbjct: 194 LKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAA 253
Query: 270 NMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
+ E L + I H + + P + ++L +LH
Sbjct: 254 RLAESL--PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHH 295
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 1e-21
Identities = 56/278 (20%), Positives = 89/278 (32%), Gaps = 55/278 (19%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
VVL+HG+ +G +W+ Q L + Y V D FGGS A L T
Sbjct: 24 QPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHT 82
Query: 123 GLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNRLGV 181
L L + VLVGFS G + Y V + ++ + + + N GV
Sbjct: 83 VLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLA---SLEPFLVQRDDNPEGV 139
Query: 182 SSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFA-NRKERAELLEGLLISN 240
G++A + DF + + + + + E + +
Sbjct: 140 PQE-------VFDGIEAAAKGD-------RFAWFTDFYKNFYNLDENLGSRISEQAVTGS 185
Query: 241 KDP---------------------------TVPNFPQRVHLLWGEDDQIFNVEL-AHNMK 272
+ P +L G D I ++ A
Sbjct: 186 WNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKP--TLILHGTKDNILPIDATARRFH 243
Query: 273 EQL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
+ + AD+V +G A H + N LK FLA
Sbjct: 244 QAVPEADYVEVEG---APHGLLWTHADEVNAALKTFLA 278
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 91.4 bits (226), Expect = 1e-21
Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 20/261 (7%)
Query: 60 KPSKPVVVLVHGFAA-----EGIVTWQFQVGALTKKYSVYIPDL--LFFGGSITDEADRS 112
KP +P + H + + + + + D + G + +
Sbjct: 32 KPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQY 91
Query: 113 PTFQ--AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170
P+ A + L L + VG G + + A +P+ V+ +V+
Sbjct: 92 PSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGW 151
Query: 171 INETNLNRLGVSSS-SELLLPN--SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK 227
++ G++SS +++L + S + L + + + +E+ + +
Sbjct: 152 MDWAAHKLTGLTSSIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYN 211
Query: 228 ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK 287
R +L V L+ G+ + +L +F +
Sbjct: 212 NRRDLNFER------GGETTLKCPVMLVVGDQAPH--EDAVVECNSKLDPTQTSFLKMAD 263
Query: 288 AGHLVHLERPCAYNRCLKQFL 308
+G L +P K FL
Sbjct: 264 SGGQPQLTQPGKLTEAFKYFL 284
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 3e-21
Identities = 46/256 (17%), Positives = 84/256 (32%), Gaps = 15/256 (5%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
+V HG+ +W+ Q+ L + Y V D G S + A LA
Sbjct: 20 QPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQ 78
Query: 123 GLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSI--LAMTDSINETNLNRL 179
+ L + VL GFS GG + + V + ++ L + N L
Sbjct: 79 LIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPME 138
Query: 180 GVSSSSELLLPNSVKGLKALLSVATYKKLW-----FPSCLYKDFLEVMFANRKERAELLE 234
+ L + + K L S + + +L+ M A K + ++
Sbjct: 139 VFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIK 198
Query: 235 GLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL--GADHVTFQGIKKAGHLV 292
++ + ++ G+ DQ+ +E + L G+ + G A H +
Sbjct: 199 AFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSG---APHGL 255
Query: 293 HLERPCAYNRCLKQFL 308
N L F+
Sbjct: 256 TDTHKDQLNADLLAFI 271
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 6e-21
Identities = 46/277 (16%), Positives = 76/277 (27%), Gaps = 42/277 (15%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
P+V+LVHGF + W + L K+++V PDL G S + S A L
Sbjct: 29 QGPLVMLVHGFG-QTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLH 87
Query: 122 TGLAKLGVDKCV-LVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
+ D+ LV G ++ + + +V + + G
Sbjct: 88 KLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQG 147
Query: 181 VSSSS------------ELLLPNSVKG-LKALLSVATYKKLWFPSCLYKDFLEVM----- 222
S E L+ + L+ + F L +
Sbjct: 148 ESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHS 207
Query: 223 ----------FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMK 272
+ L + +P L G MK
Sbjct: 208 LNASFEYYRALNESVRQNAELAKTRL-----QMP-----TMTLAGGGAGGMGTFQLEQMK 257
Query: 273 EQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
A+ V + GH + E NR + FL+
Sbjct: 258 AY--AEDVEGHVLPGCGHWLPEECAAPMNRLVIDFLS 292
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-20
Identities = 52/265 (19%), Positives = 84/265 (31%), Gaps = 31/265 (11%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
VVL+HGF G +W+ Q AL Y V D FG S A L T
Sbjct: 24 QPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNT 82
Query: 123 GLAKLGVDKCVLVGFSYGG-MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV 181
L L + VLVGFS G V+ V+ + + ++ + +T+ N G
Sbjct: 83 VLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLA---SLEPFLLKTDDNPDGA 139
Query: 182 SSSS------ELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEG 235
+ + + + + + ++ + +
Sbjct: 140 APQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAA 199
Query: 236 LLISNKDP---------TVPNFPQRVHLLWGEDDQIFNVE-LAHNMKEQL-GADHVTFQG 284
+ VP +L G D+ +E A + L A++V +G
Sbjct: 200 AAPTTWYTDFRADIPRIDVP-----ALILHGTGDRTLPIENTARVFHKALPSAEYVEVEG 254
Query: 285 IKKAGHLVHLERPCAYNRCLKQFLA 309
A H + N L FLA
Sbjct: 255 ---APHGLLWTHAEEVNTALLAFLA 276
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 1e-20
Identities = 49/272 (18%), Positives = 88/272 (32%), Gaps = 47/272 (17%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
VVL+HG+ G +W++QV AL + Y V D FG S L
Sbjct: 28 KPVVLIHGWPLSG-RSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQ 86
Query: 123 GLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNRLGV 181
L +L + LVGFS GG + Y + ++ +V +G A+ + ++ + G
Sbjct: 87 LLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAG---AVPPYLYKSEDHPEGA 143
Query: 182 SSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL---- 237
+ ++ K+ + +F + FA + E
Sbjct: 144 LDDAT------IETFKSGVINDRLA-------FLDEFTKGFFAAGDRTDLVSESFRLYNW 190
Query: 238 -----------------ISNKD--PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL--G 276
S D + F ++ G+ D E + + +
Sbjct: 191 DIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPN 250
Query: 277 ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
+ +G H ++ +N L FL
Sbjct: 251 SKVALIKG---GPHGLNATHAKEFNEALLLFL 279
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 1e-20
Identities = 49/277 (17%), Positives = 90/277 (32%), Gaps = 54/277 (19%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQ--AQCL 120
VV +HG+ G WQ Q+ A+ Y D G S F A L
Sbjct: 20 RPVVFIHGWPLNGDA-WQDQLKAVVDAGYRGIAHDRRGHGHS--TPVWDGYDFDTFADDL 76
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNRL 179
L L + LV S GG + + +++ V+ A+ + +++ N
Sbjct: 77 NDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLS---AIPPVMIKSDKNPD 133
Query: 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL-- 237
GV LK + + +KD E F+ + ++ +G
Sbjct: 134 GVPDE-------VFDALKNGVLTERSQ-------FWKDTAEGFFSANRPGNKVTQGNKDA 179
Query: 238 -------------------ISNKD--PTVPNFPQRVHLLWGEDDQIFNVE-LAHNMKEQL 275
D + F ++ G+DDQ+ ++ + +
Sbjct: 180 FWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQII 239
Query: 276 -GADHVTFQGIKKAGHLVHL--ERPCAYNRCLKQFLA 309
A+ ++G + H + + +NR L +FL
Sbjct: 240 PNAELKVYEG---SSHGIAMVPGDKEKFNRDLLEFLN 273
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 89.0 bits (221), Expect = 2e-20
Identities = 44/283 (15%), Positives = 95/283 (33%), Gaps = 46/283 (16%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTF-- 115
+P ++++HG + + AL + +V D + G S T D F
Sbjct: 51 QPHALPLIVLHGGPGMAH-NYVANIAALADETGRTVIHYDQVGCGNS-THLPDAPADFWT 108
Query: 116 ---QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172
LG+++ ++G S+GGM+ ++A P+ + ++ + S +M
Sbjct: 109 PQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSE 168
Query: 173 ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAEL 232
R + + + L ++ Y + Y+ + + ++ A+
Sbjct: 169 AAGDLRAQLPAETRAALDRHEA--AGTITHPDYLQAAAE--FYRRHVCRVVPTPQDFADS 224
Query: 233 LEGLLISNKDPTVPNFPQRVH-------------------------LLWGEDDQIFNVEL 267
+ + +PTV + + ++ GE D+ +
Sbjct: 225 VAQM---EAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEAT-PKT 280
Query: 268 AHNMKEQL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
+ + F G H HLE+P + + QFL
Sbjct: 281 WQPFVDHIPDVRSHVFPG---TSHCTHLEKPEEFRAVVAQFLH 320
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 89.5 bits (222), Expect = 4e-20
Identities = 59/284 (20%), Positives = 89/284 (31%), Gaps = 57/284 (20%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
VVL+HGF G +W+ Q AL Y V D FG S A L T
Sbjct: 25 VPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNT 83
Query: 123 GLAKLGVDKCVLVGFSYGG-MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV 181
L L + VLVGFS G V+ V+ + A+ ++ + +T+ N G
Sbjct: 84 VLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLA---SLEPFLLKTDDNPDGA 140
Query: 182 SSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFA-NRKERAELLEGLL--- 237
+ G+ A + Y Y F + + + E +
Sbjct: 141 APQEFF------DGIVAAVKADRYA-------FYTGFFNDFYNLDENLGTRISEEAVRNS 187
Query: 238 ---------------ISNKDP---------TVPNFPQRVHLLWGEDDQIFNVE-LAHNMK 272
+ VP +L G D+ +E A
Sbjct: 188 WNTAASGGFFAAAAAPTTWYTDFRADIPRIDVP-----ALILHGTGDRTLPIENTARVFH 242
Query: 273 EQL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHADE 315
+ L A++V +G A H + N L FLA +
Sbjct: 243 KALPSAEYVEVEG---APHGLLWTHAEEVNTALLAFLAKALEAQ 283
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 4e-19
Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 21/259 (8%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLAT 122
V+ HG+ + W++Q+ L+ + Y D FG S A +A
Sbjct: 20 KPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQ 78
Query: 123 GLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNRLGV 181
+ L + + LVGFS GG + + V +V+ G A+T + GV
Sbjct: 79 LIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG---AVTPLFGQKPDYPQGV 135
Query: 182 SSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD---------FLEVMFANRKERAEL 232
+ +A ++ + ++ + + A+ K +
Sbjct: 136 PLDVFARFKTELLKDRAQF-ISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDC 194
Query: 233 LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL--GADHVTFQGIKKAGH 290
+ ++ P + ++ G+ DQI E + +L GA+ ++ A H
Sbjct: 195 VTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKD---APH 251
Query: 291 LVHLERPCAYNRCLKQFLA 309
+ N L FL
Sbjct: 252 GFAVTHAQQLNEDLLAFLK 270
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 6e-19
Identities = 50/264 (18%), Positives = 81/264 (30%), Gaps = 21/264 (7%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQC 119
VV HG+ W Q+ Y V D G S A
Sbjct: 19 RDGLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAAD 77
Query: 120 LATGLAKLGVDKCVLVGFSYGG-MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
+A L + V +G S GG V+ VA P V V+ A+ + +++ N
Sbjct: 78 VAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVS---AVPPVMVKSDTNP 134
Query: 179 LGVSSSS-----ELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLE-----VMFANRKE 228
G+ L N + + S Y + + + ++ M
Sbjct: 135 DGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANA 194
Query: 229 RAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE-LAHNMKEQL-GADHVTFQGIK 286
E + ++ + V + G DDQ+ A E L A +++G
Sbjct: 195 HYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEG-- 252
Query: 287 KAGHLVHLERPCAYNRCLKQFLAS 310
H + P N L F+ S
Sbjct: 253 -LPHGMLSTHPEVLNPDLLAFVKS 275
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 6e-19
Identities = 48/265 (18%), Positives = 85/265 (32%), Gaps = 23/265 (8%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSP----TF 115
PV+ HG+ W Q+ Y V D G S +
Sbjct: 20 RDAPVIHFHHGWPLSADD-WDAQLLFFLAHGYRVVAHDRRGHGRS---SQVWDGHDMDHY 75
Query: 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN-LVQAMVVSGSI--LAMTDSIN 172
A +A +A LG+ V VG S GG + +P V V+ ++ L + N
Sbjct: 76 -ADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGN 134
Query: 173 ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLE-----VMFANRK 227
L + + N + + + + Y + + M + K
Sbjct: 135 PGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAK 194
Query: 228 ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL--GADHVTFQGI 285
+ + ++ + Q V ++ G+DDQI E + + +L T++G
Sbjct: 195 AHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKG- 253
Query: 286 KKAGHLVHLERPCAYNRCLKQFLAS 310
H + N L F+ S
Sbjct: 254 --YPHGMPTTHADVINADLLAFIRS 276
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 9e-19
Identities = 50/288 (17%), Positives = 86/288 (29%), Gaps = 50/288 (17%)
Query: 61 PSKPVVVLVHGFAAEGIVTW--QFQVGALTKKYSVYIPDLLFFGGSITDEADRSP-TFQ- 116
P+ P ++LV G + W +F V D G S T + P F
Sbjct: 21 PADPALLLVMGGNLSALG-WPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGE 79
Query: 117 -AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175
A L GVD+ +VG S G ++ +A + + + ++ + D
Sbjct: 80 LAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIE 139
Query: 176 LNRLGVSSSSEL------------LLPNSVKGLKALL--SVATYKKLWFPSCLYKDFLEV 221
G + L L+ +G A + V+ ++ L F +
Sbjct: 140 RVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTG---VPFDDA 196
Query: 222 MFANRKER---------AELLEGLLISNKDP---------TVPNFPQRVHLLWGEDDQIF 263
+A +ER AE ++ P TVP ++ E D I
Sbjct: 197 EYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVP-----TLVIQAEHDPIA 251
Query: 264 NVELAHNMKEQL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
++ + A G GH + + S
Sbjct: 252 PAPHGKHLAGLIPTARLAEIPG---MGHALPSSVHGPLAEVILAHTRS 296
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 2e-18
Identities = 41/262 (15%), Positives = 71/262 (27%), Gaps = 40/262 (15%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATG 123
P VVLV G + L ++V D G S D + + + LA
Sbjct: 24 PPVVLVGGALSTR-AGGAPLAERLAPHFTVICYDRRGRGDS-GDTPPYAVEREIEDLAAI 81
Query: 124 LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN---------ET 174
+ G + G S G +S A + + V +
Sbjct: 82 IDAAG-GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDDSRPPVPPDYQTRLDA 140
Query: 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF------PSCLYKDFLEVMFANRKE 228
L + + V L++ +W + Y VM N
Sbjct: 141 LLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPY--DHAVMGDNTIP 198
Query: 229 RAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKK 287
A ++P ++ G + A + + + A +VT +
Sbjct: 199 TARF--------ASISIP-----TLVMDGGASPAWIRHTAQELADTIPNARYVTLEN--- 242
Query: 288 AGHLVHLERPCAYNRCLKQFLA 309
H V + A L +F
Sbjct: 243 QTHTVAPD---AIAPVLVEFFT 261
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 3e-18
Identities = 50/278 (17%), Positives = 90/278 (32%), Gaps = 43/278 (15%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS----ITDEADRSPTFQA 117
+ P ++L+HG+ W +G L + Y V +PDL FG S + D + S A
Sbjct: 28 AGPTLLLLHGWP-GFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAA 86
Query: 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
A L LG++K +VG + +V K Y + V + I
Sbjct: 87 DDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPD---FGPVYFG 143
Query: 178 RLGVSSSS-----------ELLLPN---SVKGLKALLSVATYKKLWFPSCLYKDFLEVMF 223
V S E++ + K K +Y+ + ++
Sbjct: 144 LGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNC- 202
Query: 224 ANRKE---------RAELLEGLLISNKDP----TVPNFPQRVHLLWGEDDQIFNVELAHN 270
+ + RA + + +P V ++WG D
Sbjct: 203 -MKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLP-----VTMIWGLGDTCVPYAPLIE 256
Query: 271 MKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
+ + T + I+ GH + +E+P +K
Sbjct: 257 FVPKY-YSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 3e-18
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 48 KGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQ--VGALTKK-YSVYIPDLLFFGGS 104
G ++ +++ + ++ + L HG++ + W +K Y+VY PD FG S
Sbjct: 12 NGTRVFQRKMVTDSNRRSIALFHGYSFTSM-DWDKADLFNNYSKIGYNVYAPDYPGFGRS 70
Query: 105 ----ITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159
A+ + L GV + V++G S GG + YP++V ++
Sbjct: 71 ASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGII 129
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 4e-05
Identities = 15/90 (16%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 222 MFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVT 281
+ + + + + + + Q+ L+WG D + + L+ +
Sbjct: 120 QYPDIVDGIIAVAPAWVESLKGDMKKIRQKTLLVWGSKDHVVPIALSKEYASII--SGSR 177
Query: 282 FQGIKKAGHLVHLERPCAYNRCLKQFLASL 311
+ ++ +GH V++E+P + R FL +L
Sbjct: 178 LEIVEGSGHPVYIEKPEEFVRITVDFLRNL 207
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 3e-18
Identities = 46/275 (16%), Positives = 89/275 (32%), Gaps = 49/275 (17%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSI-TDEADRSPTFQAQC 119
S P V+ +HG TW + L DL G S ++ + SP ++
Sbjct: 79 GSAPRVIFLHGGGQNAH-TWDTVIVGLG--EPALAVDLPGHGHSAWREDGNYSPQLNSET 135
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179
LA L +L +VG S GG+ + ++A + P+LV +V+ + E +
Sbjct: 136 LAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQR 195
Query: 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL-- 237
G + L + + + ++ D +R + L G+
Sbjct: 196 GT-----VALMHGEREFPSFQAML-------------DLTIAAAPHR-DVKSLRRGVFHN 236
Query: 238 ---------------------ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL- 275
+ V + L+ G + + +
Sbjct: 237 SRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRAT 296
Query: 276 GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
V ++K+GH V ++P A ++ L +
Sbjct: 297 HFRGV--HIVEKSGHSVQSDQPRALIEIVRGVLDT 329
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 8e-18
Identities = 52/304 (17%), Positives = 99/304 (32%), Gaps = 28/304 (9%)
Query: 27 EIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA 86
+ P ++ E +E + K + PV++L+HG + +W A
Sbjct: 2 DFSPVPWSQYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSAL-SWAVFTAA 60
Query: 87 LTKK--YSVYIPDLLFFGGS-ITDEADRSPTFQAQCLATGLAKLGVD---KCVLVGFSYG 140
+ + + DL G + + + D S A+ + + + D +L+G S G
Sbjct: 61 IISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMG 120
Query: 141 GMVSFKVA-ELYPNLVQAMVVS----GSILAMTDSINETNLNRLGVSSSSELLLPNSVKG 195
G ++ A + + + G+ + +S+ R S E + SVK
Sbjct: 121 GAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKS 180
Query: 196 LK------ALLSVATYKK----LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTV 245
+ A +S+ K + P KD + + +G
Sbjct: 181 GQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWF-RGLSNLF 239
Query: 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLK 305
+ P LL D++ M Q + + GH VH + P +
Sbjct: 240 LSCPIPKLLLLAGVDRLDKDLTIGQM-----QGKFQMQVLPQCGHAVHEDAPDKVAEAVA 294
Query: 306 QFLA 309
FL
Sbjct: 295 TFLI 298
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 79.2 bits (195), Expect = 1e-17
Identities = 30/147 (20%), Positives = 46/147 (31%), Gaps = 9/147 (6%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQF--QVGALTKK-YSVYIPDLLFFGGSI--TDEADRSPTF 115
++ V+L+HG TWQ + L + Y DL G S A
Sbjct: 30 QARFSVLLLHGIRF-SSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELA 88
Query: 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET- 174
LA + L + V++ S GM S + + V I +
Sbjct: 89 PGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKINAANYA 148
Query: 175 --NLNRLGVSSSSELLLPNSVKGLKAL 199
L V + + S + LK L
Sbjct: 149 SVKTPALIVYGDQDPMGQTSFEHLKQL 175
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 39.1 bits (91), Expect = 8e-04
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311
+++G+ D + + + +QL + +K AGH +L++P ++ L FL L
Sbjct: 156 IVYGDQDPM--GQTSFEHLKQL--PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-17
Identities = 54/288 (18%), Positives = 95/288 (32%), Gaps = 54/288 (18%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS-----ITDEADRSPTFQAQ 118
P ++L+HGF + V W L +++ V + DL +G S + A+
Sbjct: 34 PPLLLLHGFP-QTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAK 92
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
L + +LG L G + G VS+++A P + + IL + N
Sbjct: 93 QLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSK-LAVLDILPTYEYWQRMNRAY 151
Query: 179 LGVSSS----------SELLLPNSVKG-LKALLS---------------VATYKKLWF-P 211
E LL +KA L+ V Y+ + P
Sbjct: 152 ALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADP 211
Query: 212 SCL------YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNV 265
Y+ F + ++ ++ G I VP + LWG +
Sbjct: 212 MRRHVMCEDYRAGAYADFEH--DKIDVEAGNKI-----PVP-----MLALWGASGIAQSA 259
Query: 266 ELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
++ + A V I+ +GH + E P L +F ++
Sbjct: 260 ATPLDVWRKW-ASDVQGAPIE-SGHFLPEEAPDQTAEALVRFFSAAPG 305
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 79.6 bits (196), Expect = 2e-17
Identities = 51/252 (20%), Positives = 90/252 (35%), Gaps = 23/252 (9%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEAD-RSPTFQAQ 118
+ VLVHG + W L + V DL G + + + ++
Sbjct: 8 KQQKHFVLVHGGCLGAWI-WYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSE 66
Query: 119 CLATGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
L +A + D K VL+G S+GGM E YP + V +++ +
Sbjct: 67 PLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFE 126
Query: 178 RLGVSSSSELLLPNSVK--------GLKALLSVATYKKLWFPSCLYKDFLEVMFANRKER 229
+ ++++L + G+ +L F +C +D R
Sbjct: 127 KYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGS 186
Query: 230 ---AELLEGLLISN-KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGI 285
+L + S + +V ++ +D+ F VE E +GAD V I
Sbjct: 187 LFFQDLAKAKKFSTERYGSVK-----RAYIFCNEDKSFPVEFQKWFVESVGADKVKE--I 239
Query: 286 KKAGHLVHLERP 297
K+A H+ L +P
Sbjct: 240 KEADHMGMLSQP 251
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 2e-17
Identities = 46/286 (16%), Positives = 87/286 (30%), Gaps = 42/286 (14%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQF----QVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ 116
PVV+ +HG T + ++ PDL+ FG S +
Sbjct: 27 QDAPVVLFLHGNP-----TSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFDH 81
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
+ L + + GV LV +G ++F +A P+ V+ + + + + +
Sbjct: 82 VRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRG-LAFMEFIRPMPTWQDFHH 140
Query: 177 NRLGVSSSSE-------LLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL-EVM------ 222
+ +G +L + + P + + E M
Sbjct: 141 TEVAEEQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTP 200
Query: 223 FANRKERAELLE---GLLISNKDPTVPNFPQRVH-----------LLWGEDDQIFNVELA 268
F + R +L L I+ + V Q H L GE + + E A
Sbjct: 201 FPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFA 260
Query: 269 HNMKEQL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
L + H + + A R + ++A + A
Sbjct: 261 ERFAASLTRCALIRLGA---GLHYLQEDHADAIGRSVAGWIAGIEA 303
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 5e-17
Identities = 51/286 (17%), Positives = 95/286 (33%), Gaps = 36/286 (12%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSIT-DEADRSPTFQAQ 118
K ++ V+ +HG A W+ V + IPDL+ G S +
Sbjct: 40 KHAENAVIFLHGNATSS-YLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYK 98
Query: 119 CLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
L L + K + VG +G ++F A + + ++A+V S++ + +
Sbjct: 99 YLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIE------SW 152
Query: 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL-EVM------FANRKE-R 229
++ L S +G K +L + + PS + + E F + E R
Sbjct: 153 DEWPDIEEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVR 212
Query: 230 AELLEG-----LLISNKDPTVPNFPQR---------VHLLWGEDDQIFNVELAHNMKEQL 275
L L+ K V + L+ E D F ++
Sbjct: 213 RPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPGFFSNAIVEGAKKF 272
Query: 276 -GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHADEQFTPS 320
+ V K H + + P + +K F+ + +EQ
Sbjct: 273 PNTEFVKV----KGLHFLQEDAPDEMGKYIKSFVERVLKNEQVDHH 314
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 79.4 bits (195), Expect = 9e-17
Identities = 34/300 (11%), Positives = 75/300 (25%), Gaps = 56/300 (18%)
Query: 59 KKPSKPVVVLVH--GFAAEGIVTWQFQVGALTKKY--------SVYIPDLLFFGGSITDE 108
+ ++ +V +H G + W++ + L V + D + G S
Sbjct: 48 RTATRLNLVFLHGSGMSKV---VWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRN 104
Query: 109 ADRSPTF-----QAQCLATGLAKLGVD------KCVLVGFSYGGMVSFKVAELYPNLVQA 157
R T A+ + V++G S GG + L PNL
Sbjct: 105 RGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHL 164
Query: 158 MVV-----------SGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK 206
+++ + + N + + ++
Sbjct: 165 LILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFF 224
Query: 207 KLWFPSCLYKDFLEVMFANRKERAELLEGL------------------LISNKDPTVPNF 248
L ++ ++ E + V
Sbjct: 225 TNAHSQIL-QNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFV 283
Query: 249 PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
+R + G + +++ L + I HLV++E P + +
Sbjct: 284 RKRTIHIVGARSNWCPPQNQLFLQKTLQ--NYHLDVIPGGSHLVNVEAPDLVIERINHHI 341
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 9e-17
Identities = 46/267 (17%), Positives = 95/267 (35%), Gaps = 23/267 (8%)
Query: 56 EALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGS--ITDEADRS 112
+ + ++ + +HG + ++ + T V PDL FG S TD+A +
Sbjct: 39 DEGPRDAEHTFLCLHGEPSWSF-LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYT 97
Query: 113 PTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172
F + L L L +++ LV +GG++ + P LV ++V + LA+ S
Sbjct: 98 FGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPG 157
Query: 173 ETNLNRLGVSSSSELLLPNSV--KGLKALLS--VATYKKLWFPSCLYKDFLEVM------ 222
+ + ++S L + + + + VA Y FP +K +
Sbjct: 158 KGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDA-PFPGPEFKAGVRRFPAIVPI 216
Query: 223 FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVT 281
+ + + + + + P + G D + E+ +++ + G
Sbjct: 217 TPDMEGAEIGRQAMSFWSTQWSGP-----TFMAVGAQDPVLGPEVMGMLRQAIRGCPEPM 271
Query: 282 FQGIKKAGHLVHLERPCAYNRCLKQFL 308
++ GH V L F
Sbjct: 272 I--VEAGGHFVQEHGEPIARAALAAFG 296
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-16
Identities = 51/263 (19%), Positives = 94/263 (35%), Gaps = 36/263 (13%)
Query: 61 PSKPVVVLVHGF---AAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQ 116
P PVV+ +HG WQ L + Y V PDL G S E S +
Sbjct: 24 PEHPVVLCIHGILEQGL----AWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSL 79
Query: 117 --AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174
+ + +L +LVG S G M++ +A + P ++ +++ L +S E+
Sbjct: 80 TFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKES 139
Query: 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAE--- 231
+N+L + L + + A+ + PS L ++F ++ + +
Sbjct: 140 AVNQLT-TCLDYLSSTPQHPIFPDVATAASRLRQAIPS-LSEEFSYILAQRITQPNQGGV 197
Query: 232 --------LLEGLLISNKDPTVPNFPQR--------VHLLWGEDDQIFNVELAHNMKEQL 275
+L N P + L++G+ ++ E K +
Sbjct: 198 RWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTM 257
Query: 276 -GADHVTFQGIKKAGHLVHLERP 297
A V G GH +H++
Sbjct: 258 TQAKRVFLSG----GHNLHIDAA 276
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 2e-16
Identities = 36/275 (13%), Positives = 81/275 (29%), Gaps = 35/275 (12%)
Query: 62 SKPVVVLVHGFAAEGIVTWQF----QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQ 116
S V+ +HG T + + + Y PDL+ G S + +
Sbjct: 28 SGQPVLFLHGNP-----TSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDH 82
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL-AMTDSINETN 175
+ + LG+D VLV +G ++ + A L P+ V A+ +++ +
Sbjct: 83 VAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEA 142
Query: 176 LNRLGVSSSSELLLPNSVKGL---KALLSVATYKKLWFPSCLYKDFLEVM---FANRKER 229
+ +L + + + ++ L + + F R+ R
Sbjct: 143 MGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSR 202
Query: 230 AELLE---GLLISNKDPTVPNFPQR-----------VHLLWGEDDQIFNVELAHNMKEQL 275
L+ + I + + L E + + + E +
Sbjct: 203 LPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENV 262
Query: 276 -GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
+ H + + P + + +L
Sbjct: 263 PNLEVRFVGA---GTHFLQEDHPHLIGQGIADWLR 294
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-16
Identities = 48/283 (16%), Positives = 93/283 (32%), Gaps = 43/283 (15%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS-----ITDEADRSPTFQ 116
S P ++L+HGF + + W L +Y+V DL +GGS D A+ S
Sbjct: 24 SGPALLLLHGFP-QNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYSFRAM 82
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
A + LG ++ LVG + GG ++A +P+ V ++ V I+ E +
Sbjct: 83 ASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVL-DIIPTYVMFEEVDR 141
Query: 177 NRLGVSSSS-----------ELLLPNSVKGLKALL-SVATYKKLWFPSCLYKDFLEVMFA 224
+++ + + L F +++ +
Sbjct: 142 FVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQW-- 199
Query: 225 NRKE---------RAELLEGLLISNKDP----TVPNFPQRVHLLWGEDDQIFNV-ELAHN 270
RA + + D P + G + ++ E+
Sbjct: 200 RDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCP-----ALVFSGSAGLMHSLFEMQVV 254
Query: 271 MKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
+ ++ F + GH P R L++FL+ +
Sbjct: 255 WAPR--LANMRFASL-PGGHFFVDRFPDDTARILREFLSDARS 294
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 75.8 bits (186), Expect = 4e-16
Identities = 45/259 (17%), Positives = 79/259 (30%), Gaps = 30/259 (11%)
Query: 57 ALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTF 115
++ K VLVH W V + ++V DL G + A + P F
Sbjct: 6 SMSPFVKKHFVLVHAAFHGAWC-WYKIVALMRSSGHNVTALDLGASGINPKQ-ALQIPNF 63
Query: 116 Q--AQCLATGLAKL-GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172
L +A L +K +LVG + GG+ K E +P + V ++ +
Sbjct: 64 SDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDA 123
Query: 173 ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN--RKERA 230
T + G + +L + FL + E
Sbjct: 124 TTVCTKAGSAVLGQL--------DNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDL 175
Query: 231 ELLEGLLISNKDPTVPNFPQRVHL------------LWGEDDQIFNVELAHNMKEQLGAD 278
L L+ + + V L + ++ E M E+ D
Sbjct: 176 ALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPD 235
Query: 279 HVTFQGIKKAGHLVHLERP 297
V I+ + H+ + +P
Sbjct: 236 EVKE--IEGSDHVTMMSKP 252
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 6e-16
Identities = 51/274 (18%), Positives = 92/274 (33%), Gaps = 40/274 (14%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS-----ITDEADRSPTFQAQ 118
++L+HG+ + V W L ++V DL +G S + + S AQ
Sbjct: 26 APLLLLHGYP-QTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQ 84
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
++KLG ++ +VG G V+ ++A +P+ V+ + + I T+
Sbjct: 85 DQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLAL-LDIAPTHKMYRTTDQEF 143
Query: 179 LGVSSSS----------ELLLPNSVKG-LKALLSVATYKKLWFPSCLYKDFLEVMFANRK 227
E L+ + + L+ L F +++ ++
Sbjct: 144 ATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCF--SQP 201
Query: 228 E---------RAELLEGLLISNKDP----TVPNFPQRVHLLWGEDDQIFNVELAHNMKEQ 274
RA L D + P V +LWGE I +
Sbjct: 202 AVIHATCEDYRAAATIDLEHDELDMKQKISCP-----VLVLWGEKGIIGRKYDVLATWRE 256
Query: 275 LGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
A V+ Q + GH + E P + + FL
Sbjct: 257 R-AIDVSGQSL-PCGHFLPEEAPEETYQAIYNFL 288
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 8e-16
Identities = 46/280 (16%), Positives = 74/280 (26%), Gaps = 40/280 (14%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS----ITDEADRSPTFQA 117
+V HG W+ + L + DL+ G S + S Q
Sbjct: 27 KGDAIVFQHGNPTSS-YLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQR 85
Query: 118 QCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
L L + D VLV +G + F A + + VQ + +I+
Sbjct: 86 DFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMT------W 139
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL-EVM------FANRKE- 228
+ S +G L + + P + + E M F N E
Sbjct: 140 ADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGED 199
Query: 229 RAELLE---GLLISNKDPTVPNFPQR-----------VHLLWGEDDQIFNVELAHNMKEQ 274
R L L I + V + E I +
Sbjct: 200 RRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAII-TGRIRDYVRS 258
Query: 275 L-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
+T H V + P + QF+ L +
Sbjct: 259 WPNQTEITV----PGVHFVQEDSPEEIGAAIAQFVRRLRS 294
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 75.6 bits (186), Expect = 8e-16
Identities = 41/280 (14%), Positives = 90/280 (32%), Gaps = 35/280 (12%)
Query: 56 EALKKPSKPVVVLVHGFAAEGIVTWQF----QVGALTKK-YSVYIPDLLFFGGSITDEAD 110
+ ++ V + +HG TW + + + V PD FG S +
Sbjct: 40 DEGNSDAEDVFLCLHGEP-----TWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDE 94
Query: 111 RSPTFQAQC--LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168
TF+ L + +L + LV +GG + + P+ + +++ + MT
Sbjct: 95 EDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIM-NAXLMT 153
Query: 169 DSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVM---FAN 225
D + + + + + L + + K W P+ L + F +
Sbjct: 154 DPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPT-LTEAEASAYAAPFPD 212
Query: 226 RKERAELLE---GLLISNKDPTVPNFPQR----------VHLLWGEDDQIFNVELAHNMK 272
+A + + + ++ + + G D++ ++ + MK
Sbjct: 213 TSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMK 272
Query: 273 EQLGA--DHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
+ + + AGH V LK F +
Sbjct: 273 ALINGCPEPLEIAD---AGHFVQEFGEQVAREALKHFAET 309
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 72.2 bits (178), Expect = 1e-14
Identities = 54/282 (19%), Positives = 101/282 (35%), Gaps = 52/282 (18%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTK-KYSVYIPDLLFFGGSITDEADRSP-TFQ--A 117
K ++ +HG + + +TK +V D G S +E D+S T
Sbjct: 27 EKAKLMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQFGCGRS--EEPDQSKFTIDYGV 83
Query: 118 QCLATGLAKL-GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
+ +KL G +K L+G SYGG ++ A Y + ++ ++VSG + ++ ++ E +
Sbjct: 84 EEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKE--M 141
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATY---------KKLWFPSCLYKDFLEVMFANRK 227
NRL + L +K S +Y + L +
Sbjct: 142 NRLI-----DELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSL 196
Query: 228 ERAE-------------------LLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELA 268
E AE + + + + + GE D++ +A
Sbjct: 197 EYAERRNVYRIMNGPNEFTITGTIKDWDITDK----ISAIKIPTLITVGEYDEVT-PNVA 251
Query: 269 HNMKEQL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
+ E++ G++ F+ HL E YN+ L F+
Sbjct: 252 RVIHEKIAGSELHVFRD---CSHLTMWEDREGYNKLLSDFIL 290
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 1e-14
Identities = 43/255 (16%), Positives = 90/255 (35%), Gaps = 29/255 (11%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
+ V+L+HGF + L K Y+ + P G + P Q +
Sbjct: 15 GERAVLLLHGFT-GNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDV 73
Query: 121 ATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
G L G +K + G S GG+ S K+ P ++ +V + + + ET
Sbjct: 74 MNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSE--ETMYE 129
Query: 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL 237
+ + + E + + +K P K E++ R +
Sbjct: 130 GV-LEYAREYKKREGKSEEQIEQEMEKFK--QTPMKTLKALQELIADVRDHLDLI----- 181
Query: 238 ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297
P ++ D++ N + A+ + ++ + + +++GH++ L++
Sbjct: 182 ------YAP-----TFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQE 230
Query: 298 C-AYNRCLKQFLASL 311
+ + FL SL
Sbjct: 231 KDQLHEDIYAFLESL 245
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 1e-14
Identities = 36/280 (12%), Positives = 70/280 (25%), Gaps = 40/280 (14%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS----ITDEADRSPTFQA 117
+ ++ HG W+ + + DL+ G S + +
Sbjct: 28 TGDPILFQHGNPTSS-YLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHR 86
Query: 118 QCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
L L + D+ VLV +G + F A + VQ + +I +
Sbjct: 87 DYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIE------W 140
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKE----RAEL 232
S G + +L + + P + + E A +E E
Sbjct: 141 ADFPEQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEA 200
Query: 233 LEGLL-------ISNKDPTVPNFPQRVH-----------LLWGEDDQIFNVELAHNMKEQ 274
L I+ V + + E + +
Sbjct: 201 RRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALT-TGRMRDFCRT 259
Query: 275 L-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
+T H + + P + F+ L
Sbjct: 260 WPNQTEITV----AGAHFIQEDSPDEIGAAIAAFVRRLRP 295
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 70.8 bits (173), Expect = 3e-14
Identities = 48/253 (18%), Positives = 77/253 (30%), Gaps = 27/253 (10%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQ--AQ 118
VLVHG G +W L + V DL G + + T
Sbjct: 3 EGKHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRK-IEELRTLYDYTL 60
Query: 119 CLATGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
L + L D K +LVG S GGM E YP + A V + + + + L
Sbjct: 61 PLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLE 120
Query: 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANR--KERAELLEG 235
+ + +E L L + ++ FL E L
Sbjct: 121 QYNERTPAENWLDT------QFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASS 174
Query: 236 LL----ISNKDPTVPNFPQ-------RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQG 284
L+ + +D + + + + +D+ E + +G
Sbjct: 175 LVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIE-- 232
Query: 285 IKKAGHLVHLERP 297
IK A H+ L P
Sbjct: 233 IKGADHMAMLCEP 245
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 70.5 bits (172), Expect = 3e-14
Identities = 41/245 (16%), Positives = 73/245 (29%), Gaps = 13/245 (5%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQ--AQ 118
+ VL+H W L + V DL G + +F ++
Sbjct: 2 AFAHFVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQ-IEEIGSFDEYSE 59
Query: 119 CLATGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPNLVQAMV-VSGSILAMTDSINETNL 176
L T L L K +LVG S GG+ A+ Y + A V + + +
Sbjct: 60 PLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVD 119
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLE---VMFANRKERAELL 233
+ V + + ++ LY + + L
Sbjct: 120 KLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLF 179
Query: 234 EGLLISNKDPTVPNFPQ-RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292
+ +L T + + +W + D+IF E E D V ++ H +
Sbjct: 180 QNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYK--VEGGDHKL 237
Query: 293 HLERP 297
L +
Sbjct: 238 QLTKT 242
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 3e-13
Identities = 40/262 (15%), Positives = 87/262 (33%), Gaps = 36/262 (13%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ 118
+ V+LVHGF + + A K Y+V +P L G D +
Sbjct: 37 ENGPVGVLLVHGFT-GTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVA 95
Query: 119 CLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
+ G L + G S GG ++ +AE +P++ + ++ ++ +
Sbjct: 96 SVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVD----------I 145
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLW---FPSCLYKDFLEVMFANRKERAELL 233
+ + LP + + + L K+L P+ +M + + +
Sbjct: 146 PAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRI- 204
Query: 234 EGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293
P + ++D + A + + + + ++ + H+
Sbjct: 205 ----------VCP-----ALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVAT 249
Query: 294 L--ERPCAYNRCLKQFLASLHA 313
L ++P R L +F A
Sbjct: 250 LDYDQPMIIERSL-EFFAKHAG 270
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 5e-13
Identities = 40/245 (16%), Positives = 84/245 (34%), Gaps = 11/245 (4%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEAD-RSPTFQAQ 118
K VLVH + W L + V +L G + ++
Sbjct: 2 ERKHHFVLVHNAYHGAWI-WYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSK 60
Query: 119 CLATGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPNLVQAMV-VSGSILAMTDSINETNL 176
L L L + + +LVGFS+GG+ A+++P ++ +V ++ + T +
Sbjct: 61 PLIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLD 120
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDF--LEVMFANRKERAELLE 234
+ + +S + +S+ + + LY++ + A R
Sbjct: 121 KYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFF 180
Query: 235 GLLISNKDP-TVPNFPQ-RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292
+S K+ + + + + +D+ + M + V I H+V
Sbjct: 181 TEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVSKVYE--IDGGDHMV 238
Query: 293 HLERP 297
L +P
Sbjct: 239 MLSKP 243
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 67.0 bits (163), Expect = 7e-13
Identities = 32/281 (11%), Positives = 81/281 (28%), Gaps = 55/281 (19%)
Query: 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF 82
H + + G ++ W PK+ +++ GFA + +
Sbjct: 9 AHVLRVNNGQELHVW-----ETPPKENVP---------FKNNTILIASGFA-RRMDHFAG 53
Query: 83 QVGALTKK-YSVYIPDLL---------FFGGSITDEADRSPTFQAQCLATGLAKLGVDKC 132
L+ + V+ D L ++T + + L G
Sbjct: 54 LAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKN-----SLCTVYHWLQTKGTQNI 108
Query: 133 VLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNS 192
L+ S V+++V + ++ + ++ + D++ + + L
Sbjct: 109 GLIAASLSARVAYEVISDLE--LSFLITAVGVVNLRDTLEK---------ALGFDYLSLP 157
Query: 193 VKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRV 252
+ L L +K + F+ F + + + + + P +
Sbjct: 158 IDELPNDLDFEGHKLGS------EVFVRDCFEHHWDTLDSTLDKVANTSVP--------L 203
Query: 253 HLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293
+D E ++M + H + + H +
Sbjct: 204 IAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG 244
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 61.4 bits (149), Expect = 3e-11
Identities = 41/242 (16%), Positives = 73/242 (30%), Gaps = 37/242 (15%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQA--Q 118
+ VVL+H + F AL + Y VY+P G +
Sbjct: 21 TDTGVVLLHAYT-GSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWA 79
Query: 119 CLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
+ +A + K + G S GG+ + K E P + V S IL +
Sbjct: 80 ESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHL----- 134
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKER-AELLEG 235
+ L A Y D + A + A + +
Sbjct: 135 -------------------VPGFLKYAEYMNRLAGK---SDESTQILAYLPGQLAAIDQ- 171
Query: 236 LLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHLVHL 294
+ + Q + D++ + LA+ +++ L A V F A H++ +
Sbjct: 172 -FATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITV 230
Query: 295 ER 296
Sbjct: 231 NS 232
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 62.0 bits (150), Expect = 4e-11
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 66 VVLVHGFA-----AEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQC 119
++LVHG A + W L ++ +VY+ +L F S R A
Sbjct: 11 IILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQ-SDDGPNGRGEQLLAY- 68
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
+ T LA G K LVG S GG+ S VA + P+LV ++ G+
Sbjct: 69 VKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGT 112
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 5e-11
Identities = 34/263 (12%), Positives = 73/263 (27%), Gaps = 49/263 (18%)
Query: 59 KKPSKPVVVLVHGFAAEGIVT-WQFQVGALTKK-YSVYIPDLL--------FFGGSITDE 108
P+ +++HGF L + + D+ F ++
Sbjct: 23 NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKW 82
Query: 109 ADRSPTFQAQCLATGLAKLG-VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167
+ KL V + G S GG+ A + ++++A++ +
Sbjct: 83 LT-----NILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMI 137
Query: 168 TDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK 227
+ L L + ++ G K L +++ V R
Sbjct: 138 PEIARTGELLGLKFDPENIPDELDAWDGRK----------------LKGNYVRVAQTIRV 181
Query: 228 ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK 287
E V + + V ++ G+ D+ E + +Q + I
Sbjct: 182 EDF--------------VDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK--NCKLVTIPG 225
Query: 288 AGHLVHLERPCAYNRCLKQFLAS 310
H +K+F+
Sbjct: 226 DTHCYDHHLE-LVTEAVKEFMLE 247
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 5e-11
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQC 119
P+VVL+HGF E +W+ Q+ AL Y V D +G S ++ +
Sbjct: 25 QQGPLVVLLHGFP-ESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELV 83
Query: 120 --LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
+ L G ++ +VG +G V++ A L+P+ +V
Sbjct: 84 GDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVG 126
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 241 KDPTVPNFPQRVHLLWGEDD--QIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298
D + G+ D I+ + E + ++ I GH + E P
Sbjct: 283 ADQQGKPLTPPALFIGGQYDVGTIWGAQAIERAHEVM-PNYRGTHMIADVGHWIQQEAPE 341
Query: 299 AYNRCLKQFLASL 311
NR L FL L
Sbjct: 342 ETNRLLLDFLGGL 354
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 2e-09
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
P ++ +HGF E +W+ Q+ L ++ Y PDL +G + + F L
Sbjct: 30 EGPTILFIHGFP-ELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHL 88
Query: 121 ATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
+ L +K +V +G ++++ + P+ V+A+V
Sbjct: 89 VGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVN 134
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Query: 254 LLWGEDDQIFNVELAHNMKEQLG-----ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
+ GE D ++++ A G ++ A H V ERP ++ + F+
Sbjct: 266 FIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDFI 325
Query: 309 ASL 311
Sbjct: 326 QKF 328
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 3e-09
Identities = 44/295 (14%), Positives = 89/295 (30%), Gaps = 58/295 (19%)
Query: 39 PRETIEKPKKGEKIIEKEALK---------KPSKPVVVLVHGFAA--EGIVTWQFQVGAL 87
RE + +E++ L+ + ++ HGF A + +
Sbjct: 13 GRENLYFQGMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLR 72
Query: 88 TKKYSVYIPDLL--------FFGGSITDEADRSPTFQAQCLATGLAKL-GVDKCVLVGFS 138
+ + D F ++ +E + A + + V LVG +
Sbjct: 73 DENIASVRFDFNGHGDSDGKFENMTVLNEIE-----DANAILNYVKTDPHVRNIYLVGHA 127
Query: 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKA 198
GG+V+ +A LYP+L++ +V+ + E N +G+
Sbjct: 128 QGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNT-----------------QGVTY 170
Query: 199 LLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE 258
+ + L +L + + E F + V L+ G
Sbjct: 171 NPDHIPDRLPFKDLTLGGFYLRIAQQLP-----IYE---------VSAQFTKPVCLIHGT 216
Query: 259 DDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
DD + + + + + T I+ A H FL + +A
Sbjct: 217 DDTVVSPNASKKYDQIYQ--NSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNNNA 269
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* Length = 316 | Back alignment and structure |
|---|
Score = 54.0 bits (129), Expect = 2e-08
Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 14/158 (8%)
Query: 3 NLVAAQRPLLQGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPS 62
+L+ RP G +G+ +P + V + A
Sbjct: 14 DLMPYARPFAVGKRTCSGIVGLPSGSDPAFSQPKSVLDAGLTCQG---------ASPSSV 64
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
++LV G G ++ L+ + Y+ F ++ + + +
Sbjct: 65 SKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFM---LNDTQVNTEYMVNAI 121
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAM 158
T A G +K ++ +S GG+V+ +P++ +
Sbjct: 122 TTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 159
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* Length = 317 | Back alignment and structure |
|---|
Score = 53.6 bits (128), Expect = 2e-08
Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 7/105 (6%)
Query: 57 ALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFG-GSITDEADRSP 113
A ++LV G G ++ L+ + Y+ F +
Sbjct: 25 ASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTE--- 81
Query: 114 TFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAM 158
+ + A G +K ++ +S GG+V+ +P++ +
Sbjct: 82 -YMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 125
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 4e-08
Identities = 35/156 (22%), Positives = 61/156 (39%), Gaps = 14/156 (8%)
Query: 13 QGLMKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGF 72
L ++ V + P P + + + ++ S P V L HGF
Sbjct: 208 TALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGF 267
Query: 73 AAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQA---QCLA---TGLA 125
E +W++Q+ AL + Y V D+ +G S P + + L
Sbjct: 268 P-ESWYSWRYQIPALAQAGYRVLAMDMKGYGES-----SAPPEIEEYCMEVLCKEMVTFL 321
Query: 126 K-LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
LG+ + V +G +GGM+ + +A YP V+A+
Sbjct: 322 DKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVAS 357
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 3e-06
Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
++ E D + +++ +M++ H+ I+ GH +++P N+ L ++L S
Sbjct: 490 MVTAEKDFVLVPQMSQHMEDW--IPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDAR 547
Query: 314 D 314
+
Sbjct: 548 N 548
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 1e-07
Identities = 41/261 (15%), Positives = 71/261 (27%), Gaps = 46/261 (17%)
Query: 36 FWVPRETIEKPKKGEKI--IEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSV 93
P E E G + + P V+++ G + ++Q + L + +
Sbjct: 123 LSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMAT 182
Query: 94 YIPDLLFFGGSI---TDEADRSPTFQAQC-LATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149
D G D A L T L + D ++G S GG + K A
Sbjct: 183 ATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAA 242
Query: 150 LYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209
P + A + S +D L K
Sbjct: 243 CEPR-LAACI---SWGGFSD--------------------------LDYWDLETPLTKES 272
Query: 210 FPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAH 269
+ D LE + E + ++L G D++ +
Sbjct: 273 WKYVSKVDTLEEARLHVHAALET---------RDVLSQIACPTYILHGVHDEVP-LSFVD 322
Query: 270 NMKEQLGADHVTFQGIKKAGH 290
+ E + A+H+ K H
Sbjct: 323 TVLELVPAEHLNLVVEKDGDH 343
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 4e-07
Identities = 51/262 (19%), Positives = 90/262 (34%), Gaps = 48/262 (18%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADR--SPTFQ 116
K ++ + HG E ++ L V+ D + G S E +R F
Sbjct: 57 GTPKALIFVSHGAG-EHSGRYEELARMLMGLDLLVFAHDHVGHGQS---EGERMVVSDFH 112
Query: 117 ------AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170
Q + + L+G S GG ++ A P MV+ ++
Sbjct: 113 VFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVL---- 168
Query: 171 INETNLNRLGVSSSSEL--LLPN-SVKGLKA-LLS-----VATYK------KLWFPSCLY 215
N + V ++ L +LPN S+ + + +LS V Y + C
Sbjct: 169 ANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFG 228
Query: 216 KDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL 275
L + + +L TVP LL G D++ + + A+ + E
Sbjct: 229 IQLLNAVSRVERALPKL-----------TVP-----FLLLQGSADRLCDSKGAYLLMELA 272
Query: 276 GADHVTFQGIKKAGHLVHLERP 297
+ T + + A H++H E P
Sbjct: 273 KSQDKTLKIYEGAYHVLHKELP 294
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 6e-07
Identities = 53/261 (20%), Positives = 90/261 (34%), Gaps = 46/261 (17%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADR--SPTFQ 116
K ++ + HG E ++ L V+ D + G S E +R F
Sbjct: 39 GTPKALIFVSHGAG-EHSGRYEELARMLMGLDLLVFAHDHVGHGQS---EGERMVVSDFH 94
Query: 117 ------AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS-ILAMTD 169
Q + + L+G S GG ++ A P MV+ +LA +
Sbjct: 95 VFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPE 154
Query: 170 SINETNLNRLGVSSSSELLLPN-SVKGLKA-LLS-----VATYK------KLWFPSCLYK 216
S + V +S +LPN S + + +LS V Y + C
Sbjct: 155 SATTFKVLAAKVLNS---VLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGI 211
Query: 217 DFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG 276
L + + +L TVP LL G D++ + + A+ + E
Sbjct: 212 QLLNAVSRVERALPKL-----------TVP-----FLLLQGSADRLCDSKGAYLLMELAK 255
Query: 277 ADHVTFQGIKKAGHLVHLERP 297
+ T + + A H++H E P
Sbjct: 256 SQDKTLKIYEGAYHVLHKELP 276
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 7e-07
Identities = 47/284 (16%), Positives = 80/284 (28%), Gaps = 61/284 (21%)
Query: 38 VPRETIEKPKKGEKIIEKEA-LKKPSK-PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVY 94
+IE P +++ L P+ P V+ VHG+ +
Sbjct: 4 AKLSSIEIPVGQDEL---SGTLLTPTGMPGVLFVHGWG-GSQHHSLVRAREAVGLGCICM 59
Query: 95 IPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVD--KCVLVGFSYGGMVSFKVA 148
DL G + + + +L VD +VG SYGG +S +
Sbjct: 60 TFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLT 119
Query: 149 ELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLL-PNSVKGLKALLSVATYKK 207
P V+ + + L ++ ++ + + AL + A YK
Sbjct: 120 RERP--VEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKG 177
Query: 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL 267
+L+ V E+D I +
Sbjct: 178 ---D------------------------VLL-------------VE---AENDVIVPHPV 194
Query: 268 AHNMKEQLGADH-VTFQGIKKAGH-LVHLERPCAYNRCLKQFLA 309
N + +T + I A H L E Y R L +L
Sbjct: 195 MRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLT 238
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 8e-07
Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 16/122 (13%)
Query: 57 ALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTF 115
+ + K +++ +HG + ++ + + D G
Sbjct: 18 RIPEAPKALLLALHGLQ-GSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPR 76
Query: 116 --------------QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVS 161
+A+ +A + L G S G V+ + +
Sbjct: 77 YVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFI 136
Query: 162 GS 163
GS
Sbjct: 137 GS 138
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-06
Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 11/100 (11%)
Query: 66 VVLVHGFAAEGIVTWQFQVGALTKK----YSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
VV+VHG + L + +Y D G+ + ++ +
Sbjct: 6 VVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPV----LSRFVQ 60
Query: 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELY--PNLVQAMV 159
L + G K +V S GG + + N V +V
Sbjct: 61 KVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 100
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 2e-06
Identities = 25/109 (22%), Positives = 34/109 (31%), Gaps = 12/109 (11%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVG-ALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
+V+ HG + V L + + + DLL D R F L
Sbjct: 35 TGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLL 94
Query: 121 ATGLA----------KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159
A+ L K G S GG + A P VQA+V
Sbjct: 95 ASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVV 143
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 Length = 285 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 3e-06
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 61 PSKPVVVLVHGFAA----EGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTF 115
+K +VL HG G+ W AL + VY+ ++ + R
Sbjct: 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEV----SQLDTSEVRGEQL 60
Query: 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159
Q + +A G K L+G S+GG VA + P+L+ +
Sbjct: 61 LQQ-VEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASAT 103
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 3e-05
Identities = 55/371 (14%), Positives = 106/371 (28%), Gaps = 119/371 (32%)
Query: 38 VPRETIEKPKKGEKIIEKEALK--KPSKPVVVLVHG--------FAAEGI---------- 77
V R + K+ ++AL +P+K V++ G A +
Sbjct: 131 VSR-----LQPYLKL--RQALLELRPAKNVLI--DGVLGSGKTWVALDVCLSYKVQCKMD 181
Query: 78 --VTWQFQVGALTKKYSVYIP--DLLF-FGGSITDEADRSPTFQAQC--LATGLAKLGVD 130
+ W + +V LL+ + T +D S + + + L +L
Sbjct: 182 FKIFW-LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 131 K----CVLVGFSYGGMVSFKVAEL----YPNLVQAMVVSGSILAMT------DSINETNL 176
K C+LV L A +S IL T D ++
Sbjct: 241 KPYENCLLV--------------LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286
Query: 177 NRLGV---------SSSSELL----------LPNSVKG--------LKALLS--VAT--- 204
+ + LL LP V + + +AT
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 205 YKKLWFP--SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG----E 258
+K + + + + L V+ E ++ + L + +P + L+W
Sbjct: 347 WKHVNCDKLTTIIESSLNVL--EPAEYRKMFDRLSVFPPSAHIP--TILLSLIWFDVIKS 402
Query: 259 DDQIFNVELA-------HNMKEQLGADHVTFQGIKKAGHLVHLERPC--AYN--RCLKQF 307
D + +L + + + + K + L R YN +
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 308 -LASLHADEQF 317
L + D+ F
Sbjct: 463 DLIPPYLDQYF 473
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 4e-05
Identities = 18/109 (16%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGA---LTKKYSVYIPDLLFFGGSITDEADRSPTFQAQC 119
PVV++ G + + T +++ ++ D+ G S + Q
Sbjct: 193 HPVVIVSAGL--DSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQA 250
Query: 120 L---ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165
+ + + + L+GF +GG +++ L ++A V+ G+ +
Sbjct: 251 VLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPI 299
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 2e-04
Identities = 18/95 (18%), Positives = 30/95 (31%), Gaps = 9/95 (9%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-----YSVYIPDLLFFGGSITDEADRSPTF 115
S+ +L HGF + +V AL + ++ PD
Sbjct: 2 MSRGHCILAHGFESG---PDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRG 58
Query: 116 QAQCLATGLAKL-GVDKCVLVGFSYGGMVSFKVAE 149
+ Q L VL G S G ++ +V+
Sbjct: 59 RLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSL 93
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 2e-04
Identities = 34/224 (15%), Positives = 69/224 (30%), Gaps = 20/224 (8%)
Query: 61 PSKPVVVLVHGF--AAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQ 118
++ +++V G + E + + Y+V + DL G + +A
Sbjct: 157 KAQDTLIVVGGGDTSRE-DLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARA- 214
Query: 119 CLATGLAKLGVD--KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
++ L K + GFS GG + + E ++A + S I + + +
Sbjct: 215 AISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDKR-IKAWIASTPIYDVAEVFRISFS 273
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGL 236
L + V + + V K W F +V F +
Sbjct: 274 TALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQ-------FGQVDFITSVNEVLEQAQI 326
Query: 237 LISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280
+ NK VP L G + + + + + +
Sbjct: 327 VDYNK-IDVP-----SLFLVGAGEDSELMRQSQVLYDNFKQRGI 364
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 6e-04
Identities = 34/241 (14%), Positives = 73/241 (30%), Gaps = 36/241 (14%)
Query: 59 KKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSI--TDEADRSPTFQ 116
P ++ + G G++ ++ + A ++ F D +
Sbjct: 154 GPGPFPGIIDIFGIG-GGLLEYRASLLA-GHGFATLALAYYNFEDLPNNMDNISLEYFEE 211
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
A C ++ L+G S G + +A N+ + ++GS ++ +IN +
Sbjct: 212 AVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAINYKH- 270
Query: 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGL 236
++ L + K + R L+ G
Sbjct: 271 --------------------------SSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGY 304
Query: 237 LISNKDPTVPNFPQRVHLLWGEDDQIFN-VELAHNMKEQL---GADHVTFQGIKKAGHLV 292
+ P + + L+ G+DD + A + E+L G + GH +
Sbjct: 305 KNPSMIP-IEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYI 363
Query: 293 H 293
Sbjct: 364 E 364
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 100.0 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 100.0 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 100.0 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 100.0 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 100.0 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 100.0 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 100.0 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 100.0 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 100.0 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 100.0 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 100.0 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 100.0 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 100.0 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 100.0 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.97 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.97 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.97 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.97 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.97 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.97 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.97 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.97 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.96 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.96 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.96 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.96 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.96 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.96 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.96 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.96 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.96 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.95 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.95 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.95 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.95 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.95 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.95 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.95 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.95 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.95 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.95 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.95 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.95 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.95 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.94 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.94 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.94 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.94 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.94 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.94 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.94 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.94 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.94 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.94 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.94 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.94 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.94 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.94 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.93 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.93 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.93 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.93 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.92 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.92 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.92 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.92 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.92 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.92 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.92 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.91 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.91 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.91 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.91 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.91 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.91 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.91 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.91 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.91 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.91 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.91 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.91 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.9 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.9 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.9 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.9 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.89 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.89 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.89 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.89 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.89 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.89 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.89 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.89 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.88 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.88 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.88 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.88 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.88 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.88 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.87 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.87 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.87 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.87 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.87 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.85 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.85 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.85 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.85 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.84 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.84 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.84 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.84 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.84 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.84 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.83 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.83 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.83 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.82 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.82 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.81 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.81 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.8 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.78 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.78 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.77 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.76 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.76 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.75 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.75 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.75 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.73 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.72 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.72 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.71 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.71 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.7 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.7 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.7 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.69 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.69 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.68 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.67 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.65 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.65 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.63 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.58 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.56 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.56 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.54 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.45 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.44 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 99.25 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.14 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 99.1 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.09 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 99.03 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.02 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.92 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.91 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.83 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.8 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.65 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.63 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.61 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.51 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 98.5 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.48 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 98.43 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.43 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.42 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 98.39 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 98.36 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.36 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.28 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.27 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.14 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.14 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.1 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 98.0 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.95 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.82 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.74 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.59 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.49 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 97.33 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 97.06 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.96 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.93 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 96.64 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.64 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.64 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 96.62 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.55 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.5 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.43 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.36 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.34 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 96.3 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.14 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 95.68 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.09 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 91.94 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=268.64 Aligned_cols=257 Identities=16% Similarity=0.203 Sum_probs=186.7
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG 103 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~ 103 (320)
.++...||.+|+|...|+ +++|+|||+||++.+.. .|..+++.|+++|+|+++|+||||.
T Consensus 7 ~~~~~~~g~~l~y~~~G~-------------------~~~p~lvl~hG~~~~~~-~w~~~~~~L~~~~~vi~~D~rG~G~ 66 (266)
T 3om8_A 7 SFLATSDGASLAYRLDGA-------------------AEKPLLALSNSIGTTLH-MWDAQLPALTRHFRVLRYDARGHGA 66 (266)
T ss_dssp EEEECTTSCEEEEEEESC-------------------TTSCEEEEECCTTCCGG-GGGGGHHHHHTTCEEEEECCTTSTT
T ss_pred eEEeccCCcEEEEEecCC-------------------CCCCEEEEeCCCccCHH-HHHHHHHHhhcCcEEEEEcCCCCCC
Confidence 344555899999998885 36789999999999999 9999999999889999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSS 183 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
|+.+...++++.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++......... .......
T Consensus 67 S~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~--~~~~~~~-- 142 (266)
T 3om8_A 67 SSVPPGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQ--WDERIAA-- 142 (266)
T ss_dssp SCCCCSCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHH--HHHHHHH--
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhH--HHHHHHH--
Confidence 998777899999999999999999999999999999999999999999999999999998654322110 0000000
Q ss_pred cccccCcCcHHHHHHHHhHhhhcc-ccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCC
Q 020916 184 SSELLLPNSVKGLKALLSVATYKK-LWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQ 261 (320)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 261 (320)
... ................... ........+.+..... ............+...+....+.++++|+|+|+|++|.
T Consensus 143 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~ 220 (266)
T 3om8_A 143 VLQ--AEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDT 220 (266)
T ss_dssp HHH--CSSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCS
T ss_pred HHc--cccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCC
Confidence 000 0000000111111100000 0001122222222221 11222222333334445556788999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 262 IFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
++|++..+.+.+.++ ++++++++ +||++++|+|+++++.|.+||+
T Consensus 221 ~~~~~~~~~l~~~ip--~a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 221 VTAASHGELIAASIA--GARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp SSCHHHHHHHHHHST--TCEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhCC--CCEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999 99999998 7999999999999999999985
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=263.50 Aligned_cols=262 Identities=17% Similarity=0.244 Sum_probs=182.8
Q ss_pred ceEEEcCC-C---ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHH-HHhhccceEE
Q 020916 23 PHAVEIEP-G---TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQV-GALTKKYSVY 94 (320)
Q Consensus 23 ~~~~~~~~-g---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~-~~l~~~~~vi 94 (320)
.+++++++ | .+++|...| ++++|||+||++ ++.. .|..++ +.|+++|+|+
T Consensus 10 ~~~~~~~~~g~~~~~l~y~~~G---------------------~g~~vvllHG~~~~~~~~~-~w~~~~~~~L~~~~~vi 67 (286)
T 2puj_A 10 SKFVKINEKGFSDFNIHYNEAG---------------------NGETVIMLHGGGPGAGGWS-NYYRNVGPFVDAGYRVI 67 (286)
T ss_dssp EEEEEECSTTCSSEEEEEEEEC---------------------CSSEEEEECCCSTTCCHHH-HHTTTHHHHHHTTCEEE
T ss_pred ceEEEecCCCcceEEEEEEecC---------------------CCCcEEEECCCCCCCCcHH-HHHHHHHHHHhccCEEE
Confidence 35677732 7 899998766 357999999997 6777 899999 9998889999
Q ss_pred ecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 95 IPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 95 ~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
++|+||||.|+.+.. .++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..........
T Consensus 68 ~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~ 147 (286)
T 2puj_A 68 LKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAP 147 (286)
T ss_dssp EECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSC
T ss_pred EECCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccc
Confidence 999999999987765 6889999999999999999999999999999999999999999999999999986532111000
Q ss_pred cccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhh-----ccCCCCCCCCC
Q 020916 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL-----ISNKDPTVPNF 248 (320)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 248 (320)
...... ..............+...+...........++..................+...+. ..+....+.++
T Consensus 148 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 225 (286)
T 2puj_A 148 MPMEGI--KLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEI 225 (286)
T ss_dssp SSCHHH--HHHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGC
T ss_pred cchhhH--HHHHHHhhCCcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhc
Confidence 000000 00000000011112222222222221112222222222211111111111111110 12233467789
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++|+|+|+|++|.++|.+..+.+.+.++ ++++++++++||+++.|+|+++++.|.+||++
T Consensus 226 ~~P~Lii~G~~D~~~p~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 226 KAKTFITWGRDDRFVPLDHGLKLLWNID--DARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHSS--SEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCccCHHHHHHHHHHCC--CCeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998 89999999999999999999999999999974
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=261.31 Aligned_cols=265 Identities=18% Similarity=0.240 Sum_probs=182.1
Q ss_pred hcCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecC
Q 020916 18 MAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPD 97 (320)
Q Consensus 18 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d 97 (320)
..+++..++.+ +|.+++|...| ++|+|||+||++++.. .|..+++.|+++|+|+++|
T Consensus 6 ~~~~~~~~~~~-~g~~l~y~~~G---------------------~g~~lvllHG~~~~~~-~w~~~~~~L~~~~~via~D 62 (294)
T 1ehy_A 6 PEDFKHYEVQL-PDVKIHYVREG---------------------AGPTLLLLHGWPGFWW-EWSKVIGPLAEHYDVIVPD 62 (294)
T ss_dssp GGGSCEEEEEC-SSCEEEEEEEE---------------------CSSEEEEECCSSCCGG-GGHHHHHHHHTTSEEEEEC
T ss_pred CCCcceeEEEE-CCEEEEEEEcC---------------------CCCEEEEECCCCcchh-hHHHHHHHHhhcCEEEecC
Confidence 34566677877 79999998766 4689999999999999 9999999999889999999
Q ss_pred CCCCCCCCCCCC-----CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc
Q 020916 98 LLFFGGSITDEA-----DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172 (320)
Q Consensus 98 ~~G~G~s~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 172 (320)
+||||.|+.+ . .++.+.+++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|+++++........
T Consensus 63 l~G~G~S~~~-~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~ 141 (294)
T 1ehy_A 63 LRGFGDSEKP-DLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVY 141 (294)
T ss_dssp CTTSTTSCCC-CTTCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC----
T ss_pred CCCCCCCCCC-ccccccCcCHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhh
Confidence 9999999987 4 589999999999999999999999999999999999999999999999999997432111000
Q ss_pred ccccc---ccc--cc--ccccccCcCcH---HH-HHHHHhHhhhccccCCchhHHHHHHHHhcChhh--HHHHhhhhhcc
Q 020916 173 ETNLN---RLG--VS--SSSELLLPNSV---KG-LKALLSVATYKKLWFPSCLYKDFLEVMFANRKE--RAELLEGLLIS 239 (320)
Q Consensus 173 ~~~~~---~~~--~~--~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 239 (320)
..... .+. .. ........... .. ...++..........+++....+.......... ...++..+...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (294)
T 1ehy_A 142 FGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRP 221 (294)
T ss_dssp -------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSS
T ss_pred ccchhccCceEEEecCcchhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhh
Confidence 00000 000 00 00000000011 11 111111111111223333334444333211111 11122222111
Q ss_pred CCCC----CCCCCCCcEEEEecCCCCCCC-HHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 240 NKDP----TVPNFPQRVHLLWGEDDQIFN-VELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 240 ~~~~----~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
.... .+.++++|+|+|+|++|.++| .+..+.+.+.++ ++++++++++||++++|+|+++++.|.+||
T Consensus 222 ~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 222 DAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYS--NYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp SCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBS--SEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred hhhhcCCcccCcCCCCEEEEEeCCCCCcchHHHHHHHHHHcC--CCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 1111 234899999999999999998 467778888888 999999999999999999999999999997
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=260.47 Aligned_cols=257 Identities=16% Similarity=0.256 Sum_probs=182.3
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG 103 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~ 103 (320)
.++++ ||.+++|...|+. .+++|+|||+||++++.. .|..+++.|++.|+|+++|+||||.
T Consensus 5 ~~~~~-~g~~l~y~~~g~~-----------------~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~ 65 (266)
T 2xua_A 5 PYAAV-NGTELHYRIDGER-----------------HGNAPWIVLSNSLGTDLS-MWAPQVAALSKHFRVLRYDTRGHGH 65 (266)
T ss_dssp CEEEC-SSSEEEEEEESCS-----------------SSCCCEEEEECCTTCCGG-GGGGGHHHHHTTSEEEEECCTTSTT
T ss_pred CeEEE-CCEEEEEEEcCCc-----------------cCCCCeEEEecCccCCHH-HHHHHHHHHhcCeEEEEecCCCCCC
Confidence 45677 7999999988751 012789999999999999 9999999998889999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSS 183 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
|..+...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... ........ .
T Consensus 66 S~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~--~ 141 (266)
T 2xua_A 66 SEAPKGPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSP--EVWVPRAV--K 141 (266)
T ss_dssp SCCCSSCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCH--HHHHHHHH--H
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCch--HHHHHHHH--H
Confidence 9977667899999999999999999999999999999999999999999999999999987543211 00000000 0
Q ss_pred cccccCcCcHHHH-HHHHhHhhhcccc--CCchhHHHHHHHHhc-ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCC
Q 020916 184 SSELLLPNSVKGL-KALLSVATYKKLW--FPSCLYKDFLEVMFA-NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGED 259 (320)
Q Consensus 184 ~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 259 (320)
.. ......+ ....... ..... ..+...+.+...... ...........+...+....+.++++|+++|+|++
T Consensus 142 ~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 216 (266)
T 2xua_A 142 AR----TEGMHALADAVLPRW-FTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTH 216 (266)
T ss_dssp HH----HHCHHHHHHHHHHHH-SCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETT
T ss_pred HH----hcChHHHHHHHHHHH-cCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCC
Confidence 00 0000000 0000000 00000 001111112111111 11111112222222333456778999999999999
Q ss_pred CCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 260 DQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 260 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
|.++|++..+.+.+.++ +.++++++ +||+++.|+|+++++.|.+||++.
T Consensus 217 D~~~~~~~~~~~~~~~~--~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 265 (266)
T 2xua_A 217 DLAATPAQGRELAQAIA--GARYVELD-ASHISNIERADAFTKTVVDFLTEQ 265 (266)
T ss_dssp CSSSCHHHHHHHHHHST--TCEEEEES-CCSSHHHHTHHHHHHHHHHHHTC-
T ss_pred CCcCCHHHHHHHHHhCC--CCEEEEec-CCCCchhcCHHHHHHHHHHHHHhc
Confidence 99999999999999998 88999999 999999999999999999999753
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=259.00 Aligned_cols=256 Identities=18% Similarity=0.164 Sum_probs=178.3
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE 108 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~ 108 (320)
||.+++|...| ++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+.
T Consensus 11 ~g~~l~y~~~g---------------------~g~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~ 68 (277)
T 1brt_A 11 TSIDLYYEDHG---------------------TGQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPT 68 (277)
T ss_dssp EEEEEEEEEEC---------------------SSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCS
T ss_pred CCcEEEEEEcC---------------------CCCeEEEECCCCCcHH-HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCC
Confidence 68888887766 3567999999999999 999999999987 999999999999999877
Q ss_pred CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc-ccccEEEecccccccccccccc---ccccccccc
Q 020916 109 ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN-LVQAMVVSGSILAMTDSINETN---LNRLGVSSS 184 (320)
Q Consensus 109 ~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~ 184 (320)
..++.+.+++|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++............ .........
T Consensus 69 ~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (277)
T 1brt_A 69 TGYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGI 148 (277)
T ss_dssp SCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHH
Confidence 778999999999999999999999999999999999999999999 9999999997532211000000 000000000
Q ss_pred ccccCcCcHHHHHHHHhHhhh----ccccCCchhHHHHHHHHhc-ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCC
Q 020916 185 SELLLPNSVKGLKALLSVATY----KKLWFPSCLYKDFLEVMFA-NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGED 259 (320)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 259 (320)
...........+..+...... ......++....+...... ...........+ ..+....+.++++|+|+|+|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~ 227 (277)
T 1brt_A 149 VAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-YTDFRADIPRIDVPALILHGTG 227 (277)
T ss_dssp HHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGT-TCCCTTTGGGCCSCEEEEEETT
T ss_pred HHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHH-hccchhhcccCCCCeEEEecCC
Confidence 000000000011111111100 0111222333333322221 111111222222 2333456788999999999999
Q ss_pred CCCCCHHHH-HHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 260 DQIFNVELA-HNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 260 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
|.++|.+.. +.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 228 D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 228 DRTLPIENTARVFHKALP--SAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp CSSSCGGGTHHHHHHHCT--TSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CccCChHHHHHHHHHHCC--CCcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 999998887 88999988 89999999999999999999999999999963
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=256.76 Aligned_cols=244 Identities=20% Similarity=0.283 Sum_probs=171.9
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
+++|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+. ..++++++++|+.++++.++.++++|+||||
T Consensus 13 ~~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 91 (268)
T 3v48_A 13 ADAPVVVLISGLGGSGS-YWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHAL 91 (268)
T ss_dssp TTCCEEEEECCTTCCGG-GGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHTTCCSEEEEEETH
T ss_pred CCCCEEEEeCCCCccHH-HHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHcCCCCeEEEEecH
Confidence 46899999999999999 999999999888999999999999998664 4589999999999999999999999999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc---hhHH
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS---CLYK 216 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 216 (320)
||.+|+.+|.++|++|+++|++++.......... ..... ...........+........+...+... ....
T Consensus 92 GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (268)
T 3v48_A 92 GALVGMQLALDYPASVTVLISVNGWLRINAHTRR-CFQVR-----ERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEA 165 (268)
T ss_dssp HHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHH-HHHHH-----HHHHHHHHHHHHHHHHHHHHSCHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHhChhhceEEEEeccccccchhhhH-HHHHH-----HHHHhccchhhhhhhhhhhcCchhhhhcccccchh
Confidence 9999999999999999999999876432211000 00000 0000000000000000000000000000 0000
Q ss_pred HHHHHH--hcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 217 DFLEVM--FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 217 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
...... ..........+..+...+....+.++++|+|+|+|++|.++|.+..+.+.+.++ +.++++++++||+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p--~~~~~~~~~~GH~~~~ 243 (268)
T 3v48_A 166 EDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALP--DSQKMVMPYGGHACNV 243 (268)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCS--SEEEEEESSCCTTHHH
T ss_pred hHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCC--cCeEEEeCCCCcchhh
Confidence 000000 011111122223333344556788899999999999999999999999999998 9999999999999999
Q ss_pred CChHHHHHHHHHHHHhhhh
Q 020916 295 ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~~~~ 313 (320)
|+|+++++.|.+||.+...
T Consensus 244 e~p~~~~~~i~~fl~~~~~ 262 (268)
T 3v48_A 244 TDPETFNALLLNGLASLLH 262 (268)
T ss_dssp HCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcc
Confidence 9999999999999987643
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=261.02 Aligned_cols=260 Identities=19% Similarity=0.273 Sum_probs=180.8
Q ss_pred EEEcCCC-ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhccceEEecCCCC
Q 020916 25 AVEIEPG-TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKKYSVYIPDLLF 100 (320)
Q Consensus 25 ~~~~~~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~~~vi~~d~~G 100 (320)
++.+ +| .+++|...|+ +.+|+|||+||++ ++.. .|..+++.|+++|+|+++|+||
T Consensus 17 ~~~~-~g~~~l~y~~~G~-------------------g~~~~vvllHG~~pg~~~~~-~w~~~~~~L~~~~~via~Dl~G 75 (291)
T 2wue_A 17 EVDV-DGPLKLHYHEAGV-------------------GNDQTVVLLHGGGPGAASWT-NFSRNIAVLARHFHVLAVDQPG 75 (291)
T ss_dssp EEES-SSEEEEEEEEECT-------------------TCSSEEEEECCCCTTCCHHH-HTTTTHHHHTTTSEEEEECCTT
T ss_pred EEEe-CCcEEEEEEecCC-------------------CCCCcEEEECCCCCccchHH-HHHHHHHHHHhcCEEEEECCCC
Confidence 6777 79 9999988774 2346999999997 7777 8999999998889999999999
Q ss_pred CCCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccc
Q 020916 101 FGGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179 (320)
Q Consensus 101 ~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 179 (320)
||.|+.+.. .++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++................
T Consensus 76 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 155 (291)
T 2wue_A 76 YGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGV 155 (291)
T ss_dssp STTSCCCSCCSSHHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHH
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhh
Confidence 999987765 6889999999999999999999999999999999999999999999999999987532111000000000
Q ss_pred cccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhh---hh---ccCCC--CCCCCCCCc
Q 020916 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEG---LL---ISNKD--PTVPNFPQR 251 (320)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~--~~~~~~~~P 251 (320)
..............+...+...........++......... ............ .. ..... ..+.++++|
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 232 (291)
T 2wue_A 156 --KRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALA-STPESLTATRAMGKSFAGADFEAGMMWREVYRLRQP 232 (291)
T ss_dssp --HHHHHHHHSCCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHH-TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSC
T ss_pred --HHHHHHhccCCHHHHHHHHHHhccCcccCCHHHHHHHHHHh-cCchHHHHHHHHHhhccccccccchhHHHHhhCCCC
Confidence 00000000011112222222111111112222222222211 111111111111 00 00112 467789999
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 252 VHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 252 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|+|+|++|.++|.+..+.+.+.++ ++++++++++||++++|+|+++++.|.+||++
T Consensus 233 ~lvi~G~~D~~~~~~~~~~~~~~~p--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 233 VLLIWGREDRVNPLDGALVALKTIP--RAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp EEEEEETTCSSSCGGGGHHHHHHST--TEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred eEEEecCCCCCCCHHHHHHHHHHCC--CCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 89999999999999999999999999999964
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=253.80 Aligned_cols=256 Identities=21% Similarity=0.345 Sum_probs=179.0
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHHHHHHHhhccceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
+.+++.+ +|.+++|...| ++++|||+||++.+.. ..|..+++.|++.|+|+++|+|
T Consensus 6 ~~~~~~~-~g~~l~y~~~G---------------------~g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~ 63 (282)
T 1iup_A 6 IGKSILA-AGVLTNYHDVG---------------------EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMV 63 (282)
T ss_dssp CCEEEEE-TTEEEEEEEEC---------------------CSSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCT
T ss_pred ccceEEE-CCEEEEEEecC---------------------CCCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCC
Confidence 3567777 79999998776 4578999999875433 2677888889777999999999
Q ss_pred CCCCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 100 FFGGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 100 G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|||.|+.+. ..++.+.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++....... .. ....
T Consensus 64 G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~-~~-~~~~ 141 (282)
T 1iup_A 64 GFGFTDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDV-TE-GLNA 141 (282)
T ss_dssp TSTTSCCCTTCCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCC-CH-HHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCC-CH-HHHH
Confidence 999998765 36899999999999999999999999999999999999999999999999999986532111 00 0000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHH-----------HHhhhhhccCCCCCCCC
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA-----------ELLEGLLISNKDPTVPN 247 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 247 (320)
.. .. ......+...............++.......... ...... .+...+ ......+.+
T Consensus 142 ~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~ 211 (282)
T 1iup_A 142 VW--GY-----TPSIENMRNLLDIFAYDRSLVTDELARLRYEASI-QPGFQESFSSMFPEPRQRWIDAL--ASSDEDIKT 211 (282)
T ss_dssp HH--TC-----CSCHHHHHHHHHHHCSSGGGCCHHHHHHHHHHHT-STTHHHHHHHHSCSSTHHHHHHH--CCCHHHHTT
T ss_pred Hh--cC-----CCcHHHHHHHHHHhhcCcccCCHHHHHHHHhhcc-ChHHHHHHHHHHhcccccccccc--ccchhhhhh
Confidence 00 00 0111222222222211111122222221111111 000000 000000 001135678
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+++|+|+|+|++|.++|.+..+.+.+.++ +.++++++++||+++.|+|+++++.|.+||++...
T Consensus 212 i~~P~lii~G~~D~~~p~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 275 (282)
T 1iup_A 212 LPNETLIIHGREDQVVPLSSSLRLGELID--RAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEANT 275 (282)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCT--TEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTC--
T ss_pred cCCCEEEEecCCCCCCCHHHHHHHHHhCC--CCeEEEECCCCCCccccCHHHHHHHHHHHHhcCCC
Confidence 89999999999999999999999999998 89999999999999999999999999999987543
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-40 Score=264.55 Aligned_cols=269 Identities=16% Similarity=0.206 Sum_probs=179.1
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLF 100 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G 100 (320)
++..++.+ +|.+++|...|+ +.+|+|||+||++++.. .|..+++.|++.|+||++|+||
T Consensus 7 ~~~~~~~~-~g~~l~y~~~G~-------------------g~~~pvvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G 65 (316)
T 3afi_E 7 IEIRRAPV-LGSSMAYRETGA-------------------QDAPVVLFLHGNPTSSH-IWRNILPLVSPVAHCIAPDLIG 65 (316)
T ss_dssp ---CEEEE-TTEEEEEEEESC-------------------TTSCEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECCTT
T ss_pred ccceeEEe-CCEEEEEEEeCC-------------------CCCCeEEEECCCCCchH-HHHHHHHHHhhCCEEEEECCCC
Confidence 44567777 699999988774 23459999999999999 9999999998889999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc---ccc
Q 020916 101 FGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET---NLN 177 (320)
Q Consensus 101 ~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~ 177 (320)
||.|+.+...++++.+++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++........... ...
T Consensus 66 ~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 145 (316)
T 3afi_E 66 FGQSGKPDIAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAE 145 (316)
T ss_dssp STTSCCCSSCCCHHHHHHHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGG
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhcc
Confidence 99998776678999999999999999999999999999999999999999999999999999743211000000 000
Q ss_pred c----cccccccccc-CcCcHHHH----HHHHhHhhh--ccccCCchhHHHHHHHHhcChhhH---HHHhhhhhc-----
Q 020916 178 R----LGVSSSSELL-LPNSVKGL----KALLSVATY--KKLWFPSCLYKDFLEVMFANRKER---AELLEGLLI----- 238 (320)
Q Consensus 178 ~----~~~~~~~~~~-~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----- 238 (320)
. .......... .+...... ..+...... ......++....+.... ...... ..+...+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 224 (316)
T 3afi_E 146 EQDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPF-PTPESRRPVLAFPRELPIAGEPA 224 (316)
T ss_dssp GHHHHHHHHHHHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTC-CSTGGGHHHHHTGGGSCBTTBSH
T ss_pred ccccchhHHHHHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhc-CCccchhHHHHHHHhccccccch
Confidence 0 0000000000 00000000 000000000 00111111111111110 000000 000000000
Q ss_pred ------cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 239 ------SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 239 ------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
......+.++++|+|+|+|++|.++|.+..+.+.+.++ ++++++++++||++++|+|+++++.|.+||++..
T Consensus 225 ~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p--~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~~ 302 (316)
T 3afi_E 225 DVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAASLT--RCALIRLGAGLHYLQEDHADAIGRSVAGWIAGIE 302 (316)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSS--SEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCC--CCeEEEcCCCCCCchhhCHHHHHHHHHHHHhhcC
Confidence 00011234589999999999999999999999999998 9999999999999999999999999999998765
Q ss_pred h
Q 020916 313 A 313 (320)
Q Consensus 313 ~ 313 (320)
.
T Consensus 303 ~ 303 (316)
T 3afi_E 303 A 303 (316)
T ss_dssp H
T ss_pred C
Confidence 4
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=256.42 Aligned_cols=263 Identities=17% Similarity=0.140 Sum_probs=176.8
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++...||.+|+|...|+ +++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.
T Consensus 3 ~~~~~~g~~l~y~~~g~-------------------~~~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~D~~G~G~ 62 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWGP-------------------RDAPVIHFHHGWPLSAD-DWDAQLLFFLAHGYRVVAHDRRGHGR 62 (276)
T ss_dssp EEECTTSCEEEEEEESC-------------------TTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred eEECCCCcEEEEEecCC-------------------CCCCeEEEECCCCcchh-HHHHHHHHHHhCCCEEEEecCCCCCC
Confidence 45666899999988774 25689999999999999 999999999987 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccc--cccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINET--NLNRLG 180 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~ 180 (320)
|+.+...++++.+++|+.+++++++.++++|+||||||.+|+.++.++ |++|+++|++++........... ......
T Consensus 63 S~~~~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 142 (276)
T 1zoi_A 63 SSQVWDGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSV 142 (276)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHH
Confidence 987666789999999999999999999999999999999999988887 99999999999754321110000 000000
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhcc----ccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKK----LWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
...............+..+.....+.. ....+.....+..... ............+...+....+.++++|+|+|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i 222 (276)
T 1zoi_A 143 FDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVM 222 (276)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEE
Confidence 000000000000000011110000000 0111222222222111 11111111122222222223456789999999
Q ss_pred ecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 256 WGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 256 ~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
+|++|.++|.+ ..+.+.+.++ ++++++++++||+++.++|+++++.|.+||+
T Consensus 223 ~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 223 HGDDDQIVPYENSGVLSAKLLP--NGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp EETTCSSSCSTTTHHHHHHHST--TEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred EcCCCcccChHHHHHHHHhhCC--CceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 99999999987 4566777777 8999999999999999999999999999985
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-40 Score=261.50 Aligned_cols=254 Identities=16% Similarity=0.178 Sum_probs=177.6
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG 103 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~ 103 (320)
.++.+ +|.+++|+..|+ +++|+|||+||++++....|..+++.|++.|+|+++|+||||.
T Consensus 6 ~~~~~-~g~~l~~~~~G~-------------------~~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~ 65 (286)
T 2yys_A 6 GYVPV-GEAELYVEDVGP-------------------VEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGR 65 (286)
T ss_dssp EEEEC-SSCEEEEEEESC-------------------TTSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTT
T ss_pred eEEeE-CCEEEEEEeecC-------------------CCCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCC
Confidence 45666 799999988875 3578999999999887624999999997779999999999999
Q ss_pred CCC-CCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccc
Q 020916 104 SIT-DEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180 (320)
Q Consensus 104 s~~-~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 180 (320)
|+. +.. .++++.+++|+.+++++++.++++|+||||||.+|+.+|.++|+ |+++|++++....... .........
T Consensus 66 S~~~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~-~~~~~~~~~ 143 (286)
T 2yys_A 66 SLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWL-AARLAEAAG 143 (286)
T ss_dssp SCCCCSCGGGCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHH-HHHHHHHTT
T ss_pred CCCCccCcccCcHHHHHHHHHHHHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHH-HHHHHHHhc
Confidence 987 555 68999999999999999999999999999999999999999999 9999999986521110 000000000
Q ss_pred ccccccccCcCcHHHHHH---------HHhHhhhccccCCch--hHHHHHHHHhcC---hhhHHH-HhhhhhccCCCCCC
Q 020916 181 VSSSSELLLPNSVKGLKA---------LLSVATYKKLWFPSC--LYKDFLEVMFAN---RKERAE-LLEGLLISNKDPTV 245 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~ 245 (320)
. .. .......+.. ...... ..... ............ ...... ....+...+....+
T Consensus 144 ~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 214 (286)
T 2yys_A 144 L--AP---LPDPEENLKEALKREEPKALFDRLM----FPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYL 214 (286)
T ss_dssp C--CC---CSCHHHHHHHHHHHSCHHHHHHHHH----CSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGC
T ss_pred c--cc---chhHHHHHHHHhccCChHHHHHhhh----ccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhh
Confidence 0 00 0000000100 000000 01110 111111111111 000111 11222222334567
Q ss_pred CCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 246 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
.++++|+|+|+|++|.+++.+ .+.+.+ ++ ++++++++++||+++.|+|+++++.|.+||+++.
T Consensus 215 ~~i~~P~lvi~G~~D~~~~~~-~~~~~~-~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 277 (286)
T 2yys_A 215 TPERRPLYVLVGERDGTSYPY-AEEVAS-RL--RAPIRVLPEAGHYLWIDAPEAFEEAFKEALAALV 277 (286)
T ss_dssp CCCSSCEEEEEETTCTTTTTT-HHHHHH-HH--TCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCEEEEEeCCCCcCCHh-HHHHHh-CC--CCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhhh
Confidence 889999999999999999999 999999 88 8999999999999999999999999999998754
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=259.50 Aligned_cols=257 Identities=18% Similarity=0.204 Sum_probs=174.6
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCC
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITD 107 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~ 107 (320)
.+|.+++|...| ++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+
T Consensus 14 ~~g~~l~y~~~G---------------------~g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~ 71 (281)
T 3fob_A 14 QAPIEIYYEDHG---------------------TGKPVVLIHGWPLSGR-SWEYQVPALVEAGYRVITYDRRGFGKSSQP 71 (281)
T ss_dssp TEEEEEEEEEES---------------------SSEEEEEECCTTCCGG-GGTTTHHHHHHTTEEEEEECCTTSTTSCCC
T ss_pred CCceEEEEEECC---------------------CCCeEEEECCCCCcHH-HHHHHHHHHHhCCCEEEEeCCCCCCCCCCC
Confidence 378899998777 4678999999999999 999999999876 99999999999999988
Q ss_pred CCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-CccccccEEEeccccccccccc---ccccccccccc
Q 020916 108 EADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSIN---ETNLNRLGVSS 183 (320)
Q Consensus 108 ~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~ 183 (320)
...++.+.+++|+.+++++++.++++|+||||||.+++.++.. .|++++++|++++......... ...........
T Consensus 72 ~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (281)
T 3fob_A 72 WEGYEYDTFTSDLHQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIET 151 (281)
T ss_dssp SSCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHH
Confidence 7789999999999999999999999999999999988777665 5899999999997643211100 00000000000
Q ss_pred cccccCcCcHHHHHHHHhHhhhc---cccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCC
Q 020916 184 SSELLLPNSVKGLKALLSVATYK---KLWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGED 259 (320)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 259 (320)
............+..+....... .....+........... ............+...+....+.++++|+|+|+|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~ 231 (281)
T 3fob_A 152 FKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDS 231 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETT
T ss_pred HHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCC
Confidence 00000000000011111111110 01111111111111111 111222222333333334455788999999999999
Q ss_pred CCCCCHHHH-HHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 260 DQIFNVELA-HNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 260 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
|.++|.+.. +.+.+.++ ++++++++++||+++.|+|+++++.|.+||+
T Consensus 232 D~~~p~~~~~~~~~~~~p--~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 232 DATVPFEYSGKLTHEAIP--NSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp CSSSCGGGTHHHHHHHST--TCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHhCC--CceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 999998865 66778888 9999999999999999999999999999985
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=252.66 Aligned_cols=262 Identities=18% Similarity=0.183 Sum_probs=174.8
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++...||.+|+|...| ++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.
T Consensus 2 ~~~~~~g~~l~y~~~G---------------------~g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~ 59 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG---------------------SGKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGR 59 (271)
T ss_dssp EEECTTSCEEEEEEES---------------------SSSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTT
T ss_pred eEEcCCCCEEEEEccC---------------------CCCeEEEECCCCCcHH-HHHHHHHHHHhCCceEEEecCCCCcc
Confidence 3555689999998877 4678999999999999 999999999876 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-CccccccEEEeccccccccccccc--cccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSINET--NLNRLG 180 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~ 180 (320)
|+.+...++.+.+++|+.+++++++.++++|+||||||.+++.++.. .|++|+++|++++........... ......
T Consensus 60 S~~~~~~~~~~~~a~d~~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 139 (271)
T 3ia2_A 60 SDQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDV 139 (271)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHH
Confidence 99877778999999999999999999999999999999877666655 589999999998764321110000 000000
Q ss_pred ccccccccCcCcHHHHHHHHhHhhh-c-cccCCchhHHHHHHHH-hcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATY-K-KLWFPSCLYKDFLEVM-FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
..................+...... . ................ .............+...+....+.++++|+|+|+|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G 219 (271)
T 3ia2_A 140 FARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHG 219 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEE
T ss_pred HHHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEe
Confidence 0000000000000000000000000 0 0111111111111111 11112222222222223333456789999999999
Q ss_pred CCCCCCCHHH-HHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 258 EDDQIFNVEL-AHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 258 ~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++|.++|++. .+.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 220 ~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 220 DGDQIVPFETTGKVAAELIK--GAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp TTCSSSCGGGTHHHHHHHST--TCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CCCCcCChHHHHHHHHHhCC--CceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 9999999887 455566666 89999999999999999999999999999863
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=253.02 Aligned_cols=264 Identities=18% Similarity=0.123 Sum_probs=176.3
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++...||.+|+|...|+ +++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.
T Consensus 2 ~~~~~~g~~l~y~~~g~-------------------~~~~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~ 61 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWGP-------------------RDGLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGR 61 (275)
T ss_dssp EEECTTSCEEEEEEESC-------------------TTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred eEEccCCCEEEEEEcCC-------------------CCCceEEEECCCCCchh-hHHHHHHHHHHCCceEEEEcCCcCCC
Confidence 35566899999988774 35689999999999999 999999999987 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccc--cccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINET--NLNRLG 180 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~ 180 (320)
|..+...++++++++|+.+++++++.++++|+||||||.+++.++.++ |++|+++|++++........... ......
T Consensus 62 S~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 141 (275)
T 1a88_A 62 SDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEV 141 (275)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHH
Confidence 987766789999999999999999999999999999999999988876 99999999999754321100000 000000
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhcc----ccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKK----LWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
...............+..+.....+.. ....+.....+..... ............+...+....+.++++|+|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 221 (275)
T 1a88_A 142 FDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVA 221 (275)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEE
T ss_pred HHHHHHHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEE
Confidence 000000000000000011100000000 0011222222222111 11111111111121122223456789999999
Q ss_pred ecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 256 WGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 256 ~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|++|.++|++ ..+.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 222 ~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 222 HGTDDQVVPYADAAPKSAELLA--NATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp EETTCSSSCSTTTHHHHHHHST--TEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred ecCCCccCCcHHHHHHHHhhCC--CcEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 99999999887 4455667777 89999999999999999999999999999963
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=264.90 Aligned_cols=259 Identities=11% Similarity=0.104 Sum_probs=176.6
Q ss_pred cCCCceEEEcCCC----ceeeEeccCcccccCCCCcceEEEeeccCCC-CCeEEEEcCCCCCccccHHHHHHHhhcc-ce
Q 020916 19 AGVQPHAVEIEPG----TTMNFWVPRETIEKPKKGEKIIEKEALKKPS-KPVVVLVHGFAAEGIVTWQFQVGALTKK-YS 92 (320)
Q Consensus 19 ~~~~~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~ 92 (320)
..++.+++++ +| .+++|...|+ ++ +|+|||+||+++++. .|+.+++.|+++ |+
T Consensus 18 ~~~~~~~~~~-~g~~~g~~l~y~~~G~-------------------~~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~r 76 (310)
T 1b6g_A 18 YPFSPNYLDD-LPGYPGLRAHYLDEGN-------------------SDAEDVFLCLHGEPTWSY-LYRKMIPVFAESGAR 76 (310)
T ss_dssp CCCCCEEEES-CTTCTTCEEEEEEEEC-------------------TTCSCEEEECCCTTCCGG-GGTTTHHHHHHTTCE
T ss_pred CCCCceEEEe-cCCccceEEEEEEeCC-------------------CCCCCEEEEECCCCCchh-hHHHHHHHHHhCCCe
Confidence 3556778888 56 9999988774 24 789999999999999 999999999998 99
Q ss_pred EEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 93 VYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 93 vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
||++|+||||.|+.+. ..++++.+++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.......
T Consensus 77 via~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~ 156 (310)
T 1b6g_A 77 VIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPV 156 (310)
T ss_dssp EEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTT
T ss_pred EEEeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCc
Confidence 9999999999998765 35899999999999999999999999999999999999999999999999999985421010
Q ss_pred ----------ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcC--hhhHHHHhhhhh-
Q 020916 171 ----------INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN--RKERAELLEGLL- 237 (320)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 237 (320)
........+... . .. .+..... ....... ....+.....+...+... ......+...+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (310)
T 1b6g_A 157 TQPAFSAFVTQPADGFTAWKYD-L-VT-PSDLRLD--QFMKRWA---PTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQ 228 (310)
T ss_dssp TCTHHHHTTTSSTTTHHHHHHH-H-HS-CSSCCHH--HHHHHHS---TTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHS
T ss_pred cccchhhhhhccchHHHHHHHH-h-cc-Cchhhhh--hHHhhcC---CCCCHHHHHHHhcccCCccchHHHHHHHHHhcc
Confidence 000000000000 0 00 0000000 0000000 011111111111100000 000000000000
Q ss_pred --------ccCCCCCCC-CCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEe--cCCCcccccCChHHHHHHHHH
Q 020916 238 --------ISNKDPTVP-NFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGI--KKAGHLVHLERPCAYNRCLKQ 306 (320)
Q Consensus 238 --------~~~~~~~~~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~--~~~gH~~~~~~~~~~~~~i~~ 306 (320)
.......+. ++++|+|+|+|++|.+++ +..+.+.+.++ +++++++ +++||++++ +|+++++.|.+
T Consensus 229 ~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~ip--~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~ 304 (310)
T 1b6g_A 229 RDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLG-PDVMYPMKALI--NGCPEPLEIADAGHFVQE-FGEQVAREALK 304 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSS-HHHHHHHHHHS--TTCCCCEEETTCCSCGGG-GHHHHHHHHHH
T ss_pred cccchhhhhhhHhhhhhccccCceEEEeccCcchhh-hHHHHHHHhcc--cccceeeecCCcccchhh-ChHHHHHHHHH
Confidence 000012345 789999999999999999 88889999998 7777777 999999999 99999999999
Q ss_pred HHHh
Q 020916 307 FLAS 310 (320)
Q Consensus 307 fl~~ 310 (320)
||++
T Consensus 305 Fl~~ 308 (310)
T 1b6g_A 305 HFAE 308 (310)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9975
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=252.64 Aligned_cols=258 Identities=21% Similarity=0.301 Sum_probs=178.6
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhccceEEecCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
.+++.+ +|.+++|...|+ ...|+|||+||++ ++.. .|..+++.|++.|+|+++|+|
T Consensus 9 ~~~~~~-~g~~l~y~~~g~-------------------~g~p~vvllHG~~~~~~~~~-~~~~~~~~L~~~~~vi~~D~~ 67 (285)
T 1c4x_A 9 EKRFPS-GTLASHALVAGD-------------------PQSPAVVLLHGAGPGAHAAS-NWRPIIPDLAENFFVVAPDLI 67 (285)
T ss_dssp EEEECC-TTSCEEEEEESC-------------------TTSCEEEEECCCSTTCCHHH-HHGGGHHHHHTTSEEEEECCT
T ss_pred ceEEEE-CCEEEEEEecCC-------------------CCCCEEEEEeCCCCCCcchh-hHHHHHHHHhhCcEEEEecCC
Confidence 455666 799999988773 1334599999997 6666 899999999888999999999
Q ss_pred CCCCCCCCCC-CCChhHH----HHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 100 FFGGSITDEA-DRSPTFQ----AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 100 G~G~s~~~~~-~~~~~~~----~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
|||.|..+.. .++.+.+ ++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 68 G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 147 (285)
T 1c4x_A 68 GFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPE 147 (285)
T ss_dssp TSTTSCCCSSCCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHH
T ss_pred CCCCCCCCCCcccchhhhhhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchh
Confidence 9999987654 5789999 9999999999999999999999999999999999999999999999865322110000
Q ss_pred ccccccccccccccCcCcHHHHHHHHhHhhhccccC--CchhHHHHHHHHhcChhhHHHHhhhh------h--ccCCCCC
Q 020916 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF--PSCLYKDFLEVMFANRKERAELLEGL------L--ISNKDPT 244 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~ 244 (320)
.... ...............+.......... .++......... ........+...+ . .......
T Consensus 148 -~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T 1c4x_A 148 -LARL-----LAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVA-NDPEVRRIQEVMFESMKAGMESLVIPPAT 220 (285)
T ss_dssp -HHHH-----HTGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHH-HCHHHHHHHHHHHHHHSSCCGGGCCCHHH
T ss_pred -HHHH-----HHHhccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhc-cCHHHHHHHHHHhccccccccccccchhh
Confidence 0000 00000011122222222211111111 111111111111 1111111111110 0 0001134
Q ss_pred CCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 245 VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 245 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+.++++|+|+|+|++|.++|++..+.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 221 l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 221 LGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLK--HAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp HTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS--SEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred hccCCCCEEEEEeCCCeeeCHHHHHHHHHhCC--CceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 57789999999999999999999999999998 89999999999999999999999999999974
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=251.80 Aligned_cols=257 Identities=19% Similarity=0.242 Sum_probs=181.1
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhccceEEecC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKKYSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~~~vi~~d 97 (320)
.+.+++.+ +|.+++|...| ++++|||+||++ ++.. .|..+++.|.+.|+|+++|
T Consensus 16 ~~~~~~~~-~g~~l~y~~~g---------------------~g~~vvllHG~~~~~~~~~-~~~~~~~~L~~~~~vi~~D 72 (296)
T 1j1i_A 16 YVERFVNA-GGVETRYLEAG---------------------KGQPVILIHGGGAGAESEG-NWRNVIPILARHYRVIAMD 72 (296)
T ss_dssp CEEEEEEE-TTEEEEEEEEC---------------------CSSEEEEECCCSTTCCHHH-HHTTTHHHHTTTSEEEEEC
T ss_pred CcceEEEE-CCEEEEEEecC---------------------CCCeEEEECCCCCCcchHH-HHHHHHHHHhhcCEEEEEC
Confidence 45667777 79999998766 357999999997 6666 8999999998889999999
Q ss_pred CCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc
Q 020916 98 LLFFGGSITDEA-DRSPTFQAQCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175 (320)
Q Consensus 98 ~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 175 (320)
+||||.|. +.. .++.+.+++|+.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++......... .
T Consensus 73 l~G~G~S~-~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~-~- 149 (296)
T 1j1i_A 73 MLGFGKTA-KPDIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHE-D- 149 (296)
T ss_dssp CTTSTTSC-CCSSCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC------
T ss_pred CCCCCCCC-CCCCCCCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCc-h-
Confidence 99999999 544 68999999999999999998 8999999999999999999999999999999998653211110 0
Q ss_pred cccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcC--hhhHHHHhhhhh----ccCCCCCCCCCC
Q 020916 176 LNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN--RKERAELLEGLL----ISNKDPTVPNFP 249 (320)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~ 249 (320)
.... ... ......+...+...........+............. ............ .......+.+++
T Consensus 150 ~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 222 (296)
T 1j1i_A 150 LRPI-----INY--DFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQ 222 (296)
T ss_dssp -----------C--CSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCC
T ss_pred HHHH-----hcc--cCCchHHHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCC
Confidence 0000 000 111122223322222222222222222221111100 001111111110 011113457789
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
+|+|+|+|++|.++|++..+.+.+.++ +.++++++++||+++.|+|+++++.|.+||.+..
T Consensus 223 ~P~Lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 223 VPTLVVQGKDDKVVPVETAYKFLDLID--DSWGYIIPHCGHWAMIEHPEDFANATLSFLSLRV 283 (296)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHCT--TEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC-
T ss_pred CCEEEEEECCCcccCHHHHHHHHHHCC--CCEEEEECCCCCCchhcCHHHHHHHHHHHHhccC
Confidence 999999999999999999999999998 8999999999999999999999999999998754
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=250.11 Aligned_cols=260 Identities=15% Similarity=0.143 Sum_probs=174.4
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++...||.+++|...| ++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.
T Consensus 2 ~~~~~~g~~l~y~~~g---------------------~g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~ 59 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWG---------------------QGRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGH 59 (274)
T ss_dssp EEECTTSCEEEEEEEC---------------------SSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred eEEccCCCEEEEEecC---------------------CCceEEEECCCcchHH-HHHHHHHHHHhCCCeEEEEcCCCCCC
Confidence 3556689999997766 4678999999999999 999999999887 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccc--cccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINET--NLNRLG 180 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~ 180 (320)
|..+...++++.+++|+.+++++++.++++|+||||||.+++.++.++ |++|+++|++++........... ......
T Consensus 60 S~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 139 (274)
T 1a8q_A 60 STPVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEV 139 (274)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHH
Confidence 987766789999999999999999999999999999999999988776 99999999999754221100000 000000
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhcc----ccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKK----LWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
...............+..+.. ..+.. ..........+..... ............+...+....+.++++|+|+|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 218 (274)
T 1a8q_A 140 FDALKNGVLTERSQFWKDTAE-GFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVV 218 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEE
T ss_pred HHHHHHHhhccHHHHHHHhcc-cccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEE
Confidence 000000000000000001100 01110 0112222222222111 11111111112222222234567889999999
Q ss_pred ecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccC--ChHHHHHHHHHHHH
Q 020916 256 WGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLE--RPCAYNRCLKQFLA 309 (320)
Q Consensus 256 ~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~ 309 (320)
+|++|.++|++ ..+.+.+.++ ++++++++++||+++.+ +|+++++.|.+||+
T Consensus 219 ~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 219 HGDDDQVVPIDATGRKSAQIIP--NAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp EETTCSSSCGGGTHHHHHHHST--TCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred ecCcCCCCCcHHHHHHHHhhCC--CceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 99999999987 4456667777 89999999999999999 99999999999985
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=251.23 Aligned_cols=260 Identities=16% Similarity=0.121 Sum_probs=174.3
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++...||.+++|...| ++++|||+||++++.. .|..+++.|.++ |+|+++|+||||.
T Consensus 2 ~~~~~~g~~l~y~~~g---------------------~~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~ 59 (273)
T 1a8s_A 2 TFTTRDGTQIYYKDWG---------------------SGQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGR 59 (273)
T ss_dssp EEECTTSCEEEEEEES---------------------CSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred eEecCCCcEEEEEEcC---------------------CCCEEEEECCCCCcHH-HHhhHHhhHhhCCcEEEEECCCCCCC
Confidence 3556689999997766 4578999999999999 999999999987 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccccccccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNRLGVS 182 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
|..+...++++.+++|+.+++++++.++++|+||||||.+++.++.++ |++|+++|++++............ ......
T Consensus 60 S~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~ 138 (273)
T 1a8s_A 60 SSQPWSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANP-GGLPME 138 (273)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCT-TSBCHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCcccc-ccCcHH
Confidence 987766789999999999999999999999999999999999977776 999999999997542211000000 000000
Q ss_pred ccccccCcCcHHHHHHHHhHhh----hcc----ccCCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEE
Q 020916 183 SSSELLLPNSVKGLKALLSVAT----YKK----LWFPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVH 253 (320)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 253 (320)
....+...........+.... +.. ....+.....+..... ............+...+....+.++++|+|
T Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 217 (273)
T 1a8s_A 139 -VFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTL 217 (273)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEE
T ss_pred -HHHHHHHHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEE
Confidence 000000000000000111000 000 0011122222222111 111111111222222222234567899999
Q ss_pred EEecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 254 LLWGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 254 ~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|+|++|.++|.+ ..+.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 218 ii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 218 VVHGDADQVVPIEASGIASAALVK--GSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp EEEETTCSSSCSTTTHHHHHHHST--TCEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred EEECCCCccCChHHHHHHHHHhCC--CcEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 9999999999987 4556667777 89999999999999999999999999999963
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=252.60 Aligned_cols=263 Identities=18% Similarity=0.305 Sum_probs=179.0
Q ss_pred ceEEEcC-CC--ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHH-HHhhccceEEe
Q 020916 23 PHAVEIE-PG--TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQV-GALTKKYSVYI 95 (320)
Q Consensus 23 ~~~~~~~-~g--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~-~~l~~~~~vi~ 95 (320)
.++++++ +| .+++|...|+ ..++|||+||++ ++.. .|..++ +.|.+.|+|++
T Consensus 13 ~~~~~~~~~g~~~~l~y~~~g~--------------------g~~~vvllHG~~~~~~~~~-~~~~~~~~~l~~~~~vi~ 71 (289)
T 1u2e_A 13 SRFLNVEEAGKTLRIHFNDCGQ--------------------GDETVVLLHGSGPGATGWA-NFSRNIDPLVEAGYRVIL 71 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEECC--------------------CSSEEEEECCCSTTCCHHH-HTTTTHHHHHHTTCEEEE
T ss_pred ceEEEEcCCCcEEEEEEeccCC--------------------CCceEEEECCCCcccchhH-HHHHhhhHHHhcCCeEEE
Confidence 3567763 28 8999988773 233999999997 5566 788888 88988899999
Q ss_pred cCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 96 PDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 96 ~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
+|+||||.|+.+.. .++.+.+++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...........
T Consensus 72 ~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 151 (289)
T 1u2e_A 72 LDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPM 151 (289)
T ss_dssp ECCTTSTTSCCCCCSSCHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCS
T ss_pred EcCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCcccccccccc
Confidence 99999999987664 57889999999999999999999999999999999999999999999999999865321111000
Q ss_pred ccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhh-----ccCCCCCCCCCC
Q 020916 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL-----ISNKDPTVPNFP 249 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 249 (320)
.... ...............+...+...........++..................+...+. ..+....+.+++
T Consensus 152 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 229 (289)
T 1u2e_A 152 PTEG--IKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIK 229 (289)
T ss_dssp SCHH--HHHHHHHHHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCC
T ss_pred chhh--HHHHHHHHhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcC
Confidence 0000 000000000011111222222111111112222222222211111111111211111 111224567789
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|+|+|+|++|.++|++..+.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 230 ~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 230 AQTLIVWGRNDRFVPMDAGLRLLSGIA--GSELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp SCEEEEEETTCSSSCTHHHHHHHHHST--TCEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred CCeEEEeeCCCCccCHHHHHHHHhhCC--CcEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 999999999999999999999999998 89999999999999999999999999999863
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=252.51 Aligned_cols=263 Identities=14% Similarity=0.047 Sum_probs=177.5
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH-HHHHhhcc-ceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF-QVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~-~~~~l~~~-~~vi~~d~~ 99 (320)
+..++.. ||.+++|...|+ +++|+|||+||++++.. .|.. +++.|+++ |+|+++|+|
T Consensus 2 ~~~~~~~-~g~~l~y~~~G~-------------------~~~~~vvllHG~~~~~~-~w~~~~~~~L~~~G~~vi~~D~r 60 (298)
T 1q0r_A 2 SERIVPS-GDVELWSDDFGD-------------------PADPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHR 60 (298)
T ss_dssp CEEEEEE-TTEEEEEEEESC-------------------TTSCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCT
T ss_pred CCceecc-CCeEEEEEeccC-------------------CCCCeEEEEcCCCCCcc-chHHHHHHHHHhCCCEEEeeCCC
Confidence 4566776 799999988874 35789999999999999 9977 55999988 999999999
Q ss_pred CCCCCCC--C-CCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccc-cc-----
Q 020916 100 FFGGSIT--D-EADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT-DS----- 170 (320)
Q Consensus 100 G~G~s~~--~-~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~-~~----- 170 (320)
|||.|+. + ...++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..... ..
T Consensus 61 G~G~S~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 140 (298)
T 1q0r_A 61 DTGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIER 140 (298)
T ss_dssp TSTTSCCCCTTTSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHH
T ss_pred CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhh
Confidence 9999986 2 3458999999999999999999999999999999999999999999999999999865211 00
Q ss_pred ---------cccccccccccccccccc-CcCcHHH-HHHHHhH--hhhc-cccCCchhHHHHHHHHhc-C--hhhH-HHH
Q 020916 171 ---------INETNLNRLGVSSSSELL-LPNSVKG-LKALLSV--ATYK-KLWFPSCLYKDFLEVMFA-N--RKER-AEL 232 (320)
Q Consensus 171 ---------~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~-~--~~~~-~~~ 232 (320)
......... ........ ....... ....... .... .....+.....+...... . .... ...
T Consensus 141 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (298)
T 1q0r_A 141 VMRGEPTLDGLPGPQQPF-LDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAH 219 (298)
T ss_dssp HHHTCCCSSCSCCCCHHH-HHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGG
T ss_pred hhhhhhhhcccccccHHH-HHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhh
Confidence 000000000 00000000 0001111 1111100 0000 111222222222222211 0 0000 001
Q ss_pred hhhhhccCCCCC-CCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 233 LEGLLISNKDPT-VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 233 ~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+......+.... +.++++|+|+|+|++|.++|++..+.+.+.++ ++++++++++|| +.|+++++.|.+||.+.
T Consensus 220 ~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p--~~~~~~i~~~gH----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 220 YSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP--TARLAEIPGMGH----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp GGCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTST--TEEEEEETTCCS----SCCGGGHHHHHHHHHHH
T ss_pred hhhhcCcccccccccccCCCEEEEEeCCCccCCHHHHHHHHHhCC--CCEEEEcCCCCC----CCcHHHHHHHHHHHHHH
Confidence 110001111234 77899999999999999999999999999998 899999999999 78999999999999876
Q ss_pred h
Q 020916 312 H 312 (320)
Q Consensus 312 ~ 312 (320)
.
T Consensus 294 ~ 294 (298)
T 1q0r_A 294 T 294 (298)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=253.29 Aligned_cols=269 Identities=18% Similarity=0.178 Sum_probs=190.4
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDL 98 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~ 98 (320)
.+++.+++.+ ||.+++|...| ++|+|||+||++++.. .|..+++.|.+.|+|+++|+
T Consensus 8 ~~~~~~~~~~-~g~~l~~~~~g---------------------~~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~vi~~D~ 64 (301)
T 3kda_A 8 NGFESAYREV-DGVKLHYVKGG---------------------QGPLVMLVHGFGQTWY-EWHQLMPELAKRFTVIAPDL 64 (301)
T ss_dssp TTCEEEEEEE-TTEEEEEEEEE---------------------SSSEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECC
T ss_pred cccceEEEee-CCeEEEEEEcC---------------------CCCEEEEECCCCcchh-HHHHHHHHHHhcCeEEEEcC
Confidence 3567777888 79999998877 4689999999999999 99999999998899999999
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc
Q 020916 99 LFFGGSITDEADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177 (320)
Q Consensus 99 ~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 177 (320)
||||.|..+...++.+++++|+.+++++++.++ ++|+||||||.+++.+|.++|++|+++|++++..............
T Consensus 65 ~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 144 (301)
T 3kda_A 65 PGLGQSEPPKTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFT 144 (301)
T ss_dssp TTSTTCCCCSSCSSHHHHHHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEE
T ss_pred CCCCCCCCCCCCccHHHHHHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhc
Confidence 999999988778899999999999999999888 9999999999999999999999999999999875332211100000
Q ss_pred cccc------------cccccccCcCcH-HHHHHHHhHhhhccccCCchhHHHHHHHHhcCh--hhHHHHhhhh-----h
Q 020916 178 RLGV------------SSSSELLLPNSV-KGLKALLSVATYKKLWFPSCLYKDFLEVMFANR--KERAELLEGL-----L 237 (320)
Q Consensus 178 ~~~~------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~ 237 (320)
.... ............ ..+..++...........+.....+........ ......+..+ .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (301)
T 3kda_A 145 AQGESLVWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQ 224 (301)
T ss_dssp TTEECSSTHHHHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHH
T ss_pred chhhhhhhhHHHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhh
Confidence 0000 000000001111 111222222222223334444444433322111 1111111111 0
Q ss_pred ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 238 ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 238 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
.......+.++++|+++|+|++| ++....+.+.+.++ ++++++++++||+++.++|+++++.|.+|+++....
T Consensus 225 ~~~~~~~l~~i~~P~l~i~G~~D--~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~~~ 297 (301)
T 3kda_A 225 NAELAKTRLQMPTMTLAGGGAGG--MGTFQLEQMKAYAE--DVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGRHH 297 (301)
T ss_dssp HHHHTTSCBCSCEEEEEECSTTS--CTTHHHHHHHTTBS--SEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSCCC
T ss_pred cccchhhccccCcceEEEecCCC--CChhHHHHHHhhcc--cCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCchh
Confidence 11112345589999999999999 67788888888888 899999999999999999999999999999986643
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=250.70 Aligned_cols=243 Identities=19% Similarity=0.238 Sum_probs=166.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
++++|||+||++++.. .|..+++.|++.|+|+++|+||||.|..+.. .++++.+++|+.+++++++.++++|+|||||
T Consensus 15 ~g~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G 93 (269)
T 2xmz_A 15 TNQVLVFLHGFLSDSR-TYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYKDKSITLFGYSMG 93 (269)
T ss_dssp CSEEEEEECCTTCCGG-GGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGGGTTSEEEEEEETHH
T ss_pred CCCeEEEEcCCCCcHH-HHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHcCCCcEEEEEECch
Confidence 4568999999999999 9999999998889999999999999998765 6899999999999999999999999999999
Q ss_pred HHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccc-----cCCchhH
Q 020916 141 GMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL-----WFPSCLY 215 (320)
Q Consensus 141 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 215 (320)
|.+|+.+|.++|++|+++|++++.+....... ..............+.. .....+......... ..+....
T Consensus 94 g~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (269)
T 2xmz_A 94 GRVALYYAINGHIPISNLILESTSPGIKEEAN-QLERRLVDDARAKVLDI---AGIELFVNDWEKLPLFQSQLELPVEIQ 169 (269)
T ss_dssp HHHHHHHHHHCSSCCSEEEEESCCSCCSSHHH-HHHHHHHHHHHHHHHHH---HCHHHHHHHHTTSGGGGGGGGSCHHHH
T ss_pred HHHHHHHHHhCchheeeeEEEcCCcccCCchh-HHHHhhhhhHHHHhhcc---ccHHHHHHHHHhCccccccccCCHHHH
Confidence 99999999999999999999997653221110 00000000000000000 001111111100000 0122222
Q ss_pred HHHHHHHhc-ChhhHHHHhhhhh---ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 216 KDFLEVMFA-NRKERAELLEGLL---ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
..+...... ........+..+. ..+....+.++++|+++|+|++|.+++.+..+ +.+.++ ++++++++++||+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~--~~~~~~i~~~gH~ 246 (269)
T 2xmz_A 170 HQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLIP--NSKCKLISATGHT 246 (269)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHST--TEEEEEETTCCSC
T ss_pred HHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCC--CcEEEEeCCCCCC
Confidence 222222211 1111111111111 11122456788999999999999999887755 888888 8999999999999
Q ss_pred cccCChHHHHHHHHHHHHhhh
Q 020916 292 VHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~~~~ 312 (320)
++.|+|+++++.|.+|+++..
T Consensus 247 ~~~e~p~~~~~~i~~fl~~~~ 267 (269)
T 2xmz_A 247 IHVEDSDEFDTMILGFLKEEQ 267 (269)
T ss_dssp HHHHSHHHHHHHHHHHHHHHC
T ss_pred hhhcCHHHHHHHHHHHHHHhc
Confidence 999999999999999998643
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-38 Score=254.54 Aligned_cols=274 Identities=16% Similarity=0.184 Sum_probs=179.7
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc--cceEEecC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK--KYSVYIPD 97 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--~~~vi~~d 97 (320)
..+.+++.+ +|.+++|...|+... ...+++|||+||++++.. .|..++..|.+ .|+|+++|
T Consensus 27 ~~~~~~v~~-~g~~l~y~~~G~~~~---------------~~~g~plvllHG~~~~~~-~w~~~~~~l~~~~~~~Via~D 89 (330)
T 3nwo_A 27 PVSSRTVPF-GDHETWVQVTTPENA---------------QPHALPLIVLHGGPGMAH-NYVANIAALADETGRTVIHYD 89 (330)
T ss_dssp --CEEEEEE-TTEEEEEEEECCSSC---------------CTTCCCEEEECCTTTCCS-GGGGGGGGHHHHHTCCEEEEC
T ss_pred cCcceeEee-cCcEEEEEEecCccC---------------CCCCCcEEEECCCCCCch-hHHHHHHHhccccCcEEEEEC
Confidence 456778888 799999998885210 012458999999999988 89888888884 49999999
Q ss_pred CCCCCCCCCCC----CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 98 LLFFGGSITDE----ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 98 ~~G~G~s~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
+||||.|+... ..++.+.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|.++|+++++.........
T Consensus 90 ~rG~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~ 169 (330)
T 3nwo_A 90 QVGCGNSTHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEA 169 (330)
T ss_dssp CTTSTTSCCCTTSCGGGCCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHH
T ss_pred CCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHH
Confidence 99999998622 23788999999999999999999999999999999999999999999999999986532110000
Q ss_pred --cccccccc---cc------cccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHH--------hh
Q 020916 174 --TNLNRLGV---SS------SSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAEL--------LE 234 (320)
Q Consensus 174 --~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 234 (320)
........ .. ......+........++..........+.... .....+.......... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (330)
T 3nwo_A 170 AGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFA-DSVAQMEAEPTVYHTMNGPNEFHVVG 248 (330)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHH-HHHHHHHHSCHHHHHHTCSCSSSCCS
T ss_pred HHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHH-HHHHhhccchhhhhcccCchhhhhhc
Confidence 00000000 00 00000000000111111111111111111111 1111111111000000 00
Q ss_pred hhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 235 GLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 235 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
.+...+....+.++++|+|+|+|++|.++| ...+.+.+.++ ++++++++++||++++|+|+++++.|.+||++....
T Consensus 249 ~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p-~~~~~~~~~ip--~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~~~~ 325 (330)
T 3nwo_A 249 TLGDWSVIDRLPDVTAPVLVIAGEHDEATP-KTWQPFVDHIP--DVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQHDLA 325 (330)
T ss_dssp GGGGCBCGGGGGGCCSCEEEEEETTCSSCH-HHHHHHHHHCS--SEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCchhhhcccCCCCeEEEeeCCCccCh-HHHHHHHHhCC--CCcEEEeCCCCCchhhcCHHHHHHHHHHHHHhcccc
Confidence 111122334577889999999999999875 46788889898 999999999999999999999999999999987643
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=244.37 Aligned_cols=248 Identities=19% Similarity=0.223 Sum_probs=173.6
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCC-ccccHHHHHHHhhcc-ceEEecCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAE-GIVTWQFQVGALTKK-YSVYIPDL 98 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~-~~~~~~~~~~~l~~~-~~vi~~d~ 98 (320)
++..++.+ +|.+++|...++ .+++|||+||++++ .. .|..+++.|.+. |+|+++|+
T Consensus 2 ~~~~~~~~-~g~~l~~~~~g~--------------------~~~~vvllHG~~~~~~~-~~~~~~~~l~~~g~~vi~~D~ 59 (254)
T 2ocg_A 2 VTSAKVAV-NGVQLHYQQTGE--------------------GDHAVLLLPGMLGSGET-DFGPQLKNLNKKLFTVVAWDP 59 (254)
T ss_dssp CEEEEEEE-TTEEEEEEEEEC--------------------CSEEEEEECCTTCCHHH-HCHHHHHHSCTTTEEEEEECC
T ss_pred CceeEEEE-CCEEEEEEEecC--------------------CCCeEEEECCCCCCCcc-chHHHHHHHhhCCCeEEEECC
Confidence 34566777 799999987774 44689999999888 56 799999999988 99999999
Q ss_pred CCCCCCCCCCCCCC---hhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc
Q 020916 99 LFFGGSITDEADRS---PTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175 (320)
Q Consensus 99 ~G~G~s~~~~~~~~---~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 175 (320)
||||.|..+...++ ..+.++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.......... .
T Consensus 60 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~ 138 (254)
T 2ocg_A 60 RGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSM-I 138 (254)
T ss_dssp TTSTTCCSSCCCCCTTHHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHH-H
T ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHH-H
Confidence 99999987655566 6677899999999999999999999999999999999999999999999876432211000 0
Q ss_pred cccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 176 LNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
.... .... .........+... +.... .......+.... ..+............+.++++|+|+|
T Consensus 139 ~~~~--~~~~-----~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~i~~P~lii 202 (254)
T 2ocg_A 139 YEGI--RDVS-----KWSERTRKPLEAL-YGYDY-FARTCEKWVDGI-------RQFKHLPDGNICRHLLPRVQCPALIV 202 (254)
T ss_dssp HHTT--SCGG-----GSCHHHHHHHHHH-HCHHH-HHHHHHHHHHHH-------HGGGGSGGGBSSGGGGGGCCSCEEEE
T ss_pred HHHH--HHHH-----HHHHHhHHHHHHH-hcchh-hHHHHHHHHHHH-------HHHHhccCCchhhhhhhcccCCEEEE
Confidence 0000 0000 0000011100000 00000 000001111100 00110000111224567889999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
+|++|.++|.+..+.+.+.++ +.++++++++||+++.++|+++++.|.+||+
T Consensus 203 ~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 203 HGEKDPLVPRFHADFIHKHVK--GSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp EETTCSSSCHHHHHHHHHHST--TCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred ecCCCccCCHHHHHHHHHhCC--CCEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 999999999999999999998 8999999999999999999999999999983
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=251.16 Aligned_cols=256 Identities=18% Similarity=0.193 Sum_probs=174.0
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE 108 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~ 108 (320)
+|.+++|...+ ++++|||+||++++.. .|..+++.|.++ |+|+++|+||||.|+.+.
T Consensus 11 ~g~~l~y~~~g---------------------~~~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~ 68 (279)
T 1hkh_A 11 TPIELYYEDQG---------------------SGQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVN 68 (279)
T ss_dssp EEEEEEEEEES---------------------SSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCS
T ss_pred CCeEEEEEecC---------------------CCCcEEEEcCCCchhh-HHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC
Confidence 67788887665 3567999999999999 999999999887 999999999999999877
Q ss_pred CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc-ccccEEEecccccccccccccc--cccccccccc
Q 020916 109 ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN-LVQAMVVSGSILAMTDSINETN--LNRLGVSSSS 185 (320)
Q Consensus 109 ~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~ 185 (320)
..++.+.+++|+.+++++++.++++|+||||||.+++.+|.++|+ +|+++|++++............ ..........
T Consensus 69 ~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (279)
T 1hkh_A 69 TGYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIE 148 (279)
T ss_dssp SCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHH
Confidence 778999999999999999999999999999999999999999998 9999999997542211000000 0000000000
Q ss_pred cccCcCcHHHHHHHHhHhhh----ccccCCchhHHHHHHHHhc-ChhhHHHHhhhhhccCCCCCCCCC---CCcEEEEec
Q 020916 186 ELLLPNSVKGLKALLSVATY----KKLWFPSCLYKDFLEVMFA-NRKERAELLEGLLISNKDPTVPNF---PQRVHLLWG 257 (320)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~P~l~i~g 257 (320)
..........+..+...... ............+...... ...........+ ..+....+.++ ++|+|+|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~~~P~lii~G 227 (279)
T 1hkh_A 149 AAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAW-IEDFRSDVEAVRAAGKPTLILHG 227 (279)
T ss_dssp HHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHH-TCBCHHHHHHHHHHCCCEEEEEE
T ss_pred HHhhhhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHH-hhchhhhHHHhccCCCCEEEEEc
Confidence 00000000011111110000 0111222222222222211 111111111111 11222234567 899999999
Q ss_pred CCCCCCCHHHH-HHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 258 EDDQIFNVELA-HNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 258 ~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++|.++|.+.. +.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 228 ~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 228 TKDNILPIDATARRFHQAVP--EADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp TTCSSSCTTTTHHHHHHHCT--TSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CCCccCChHHHHHHHHHhCC--CeeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 99999998876 88888888 89999999999999999999999999999963
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=246.26 Aligned_cols=255 Identities=14% Similarity=0.159 Sum_probs=168.6
Q ss_pred eEEEcCCCceeeEecc--CcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCC
Q 020916 24 HAVEIEPGTTMNFWVP--RETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
.++.+ +|.+++|... |. .+|+|||+||++++.. .|..+++.|+++|+||++|+|||
T Consensus 7 ~~~~~-~g~~l~y~~~~~G~--------------------~~p~vvllHG~~~~~~-~w~~~~~~L~~~~rvia~DlrGh 64 (276)
T 2wj6_A 7 HETLV-FDNKLSYIDNQRDT--------------------DGPAILLLPGWCHDHR-VYKYLIQELDADFRVIVPNWRGH 64 (276)
T ss_dssp EEEEE-TTEEEEEEECCCCC--------------------SSCEEEEECCTTCCGG-GGHHHHHHHTTTSCEEEECCTTC
T ss_pred eEEee-CCeEEEEEEecCCC--------------------CCCeEEEECCCCCcHH-HHHHHHHHHhcCCEEEEeCCCCC
Confidence 34666 7999999887 53 5689999999999999 99999999998899999999999
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccccccccc
Q 020916 102 GGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNRLG 180 (320)
Q Consensus 102 G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 180 (320)
|.|+.+...++++.+++|+.++++++++++++|+||||||.+|+.+|.++ |++|+++|++++........ ......
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~---~~~~~~ 141 (276)
T 2wj6_A 65 GLSPSEVPDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPD---FAKSLT 141 (276)
T ss_dssp SSSCCCCCCCCHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHH---HHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCch---HHHHhh
Confidence 99997766789999999999999999999999999999999999999999 99999999998753211110 000000
Q ss_pred ccccccccCcCcH-HHHHHHHhHhhhccccCCchhHHHHHHHHhcCh-hhHH----HHhhhhhc-cCCCCCCCCCCCcEE
Q 020916 181 VSSSSELLLPNSV-KGLKALLSVATYKKLWFPSCLYKDFLEVMFANR-KERA----ELLEGLLI-SNKDPTVPNFPQRVH 253 (320)
Q Consensus 181 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~-~~~~~~~~~~~~P~l 253 (320)
. . ...... ......+...... .........+........ .... ........ ......+..+++|++
T Consensus 142 ~--~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 214 (276)
T 2wj6_A 142 L--L---KDPERWREGTHGLFDVWLDG--HDEKRVRHHLLEEMADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRP 214 (276)
T ss_dssp H--H---HCTTTHHHHHHHHHHHHHTT--BCCHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCC
T ss_pred h--c---cCcchHHHHHHHHHHHhhcc--cchHHHHHHHHHHhhhcchhhhhhccchhHHHHhhccchhhHHhhcCCCce
Confidence 0 0 000000 0011111110000 001111111110000000 0000 00000000 000123456788998
Q ss_pred EEecCCCCCCC--HHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 254 LLWGEDDQIFN--VELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 254 ~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
+++|..|...+ ....+.+.+.++ ++++++++++||++++|+|+++++.|.+||++..
T Consensus 215 v~~~~~~~~~~~~~~~~~~~~~~~p--~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~~ 273 (276)
T 2wj6_A 215 IRHIFSQPTEPEYEKINSDFAEQHP--WFSYAKLGGPTHFPAIDVPDRAAVHIREFATAIR 273 (276)
T ss_dssp EEEEECCSCSHHHHHHHHHHHHHCT--TEEEEECCCSSSCHHHHSHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccchhHHHHHHHHHhhCC--CeEEEEeCCCCCcccccCHHHHHHHHHHHHhhcc
Confidence 88764332222 334567778888 9999999999999999999999999999998763
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=244.66 Aligned_cols=256 Identities=14% Similarity=0.202 Sum_probs=181.5
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc--cceEEecCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK--KYSVYIPDLLFFG 102 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G 102 (320)
++++ +|.+++|...| ++|+|||+||++++.. .|..+++.|.+ .|+|+++|+||||
T Consensus 5 ~~~~-~g~~l~y~~~g---------------------~~~~vv~lhG~~~~~~-~~~~~~~~l~~~~g~~v~~~d~~G~G 61 (272)
T 3fsg_A 5 KEYL-TRSNISYFSIG---------------------SGTPIIFLHGLSLDKQ-STCLFFEPLSNVGQYQRIYLDLPGMG 61 (272)
T ss_dssp CCEE-CTTCCEEEEEC---------------------CSSEEEEECCTTCCHH-HHHHHHTTSTTSTTSEEEEECCTTST
T ss_pred EEEe-cCCeEEEEEcC---------------------CCCeEEEEeCCCCcHH-HHHHHHHHHhccCceEEEEecCCCCC
Confidence 4566 79999998766 5689999999999999 99999999998 4999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHH-hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAK-LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV 181 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 181 (320)
.|..+.. ++.+++++++.+++++ ++.++++|+|||+||.+|+.+|.++|++|+++|++++..................
T Consensus 62 ~s~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 140 (272)
T 3fsg_A 62 NSDPISP-STSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINIL 140 (272)
T ss_dssp TCCCCSS-CSHHHHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEE
T ss_pred CCCCCCC-CCHHHHHHHHHHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhh
Confidence 9998777 8999999999999999 7889999999999999999999999999999999998764332211110000000
Q ss_pred -cccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh----cChhhHHHHhhhhhccCCC--CCCCCCCCcEEE
Q 020916 182 -SSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF----ANRKERAELLEGLLISNKD--PTVPNFPQRVHL 254 (320)
Q Consensus 182 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~P~l~ 254 (320)
.......... ....+...... ........+..... .........+......... ..+..+++|+++
T Consensus 141 ~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 213 (272)
T 3fsg_A 141 EEDINPVENKE---YFADFLSMNVI----INNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKI 213 (272)
T ss_dssp CSCCCCCTTGG---GHHHHHHHCSE----ESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEE
T ss_pred hhhhhcccCHH---HHHHHHHHhcc----CCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEE
Confidence 1111111111 11111111111 11112222222111 1111111111111001111 145788999999
Q ss_pred EecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 255 LWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 255 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
|+|++|.++|++..+.+.+.++ ++++++++++||+++.++|+++++.|.+||+++..
T Consensus 214 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 214 MVGRNDQVVGYQEQLKLINHNE--NGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELNS 270 (272)
T ss_dssp EEETTCTTTCSHHHHHHHTTCT--TEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHHHC
T ss_pred EEeCCCCcCCHHHHHHHHHhcC--CCeEEEecCCCCCchhcCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999998 89999999999999999999999999999998754
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-38 Score=248.61 Aligned_cols=245 Identities=15% Similarity=0.188 Sum_probs=167.0
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC----CCCChhHHHHHHHHHHHHhCCCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE----ADRSPTFQAQCLATGLAKLGVDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~lvGh 137 (320)
.+|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+. ..++++.+++|+.+++++++.++++|+||
T Consensus 19 g~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 97 (271)
T 1wom_A 19 GKASIMFAPGFGCDQS-VWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGH 97 (271)
T ss_dssp CSSEEEEECCTTCCGG-GGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred CCCcEEEEcCCCCchh-hHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCCCCeEEEEe
Confidence 4589999999999999 999999999888999999999999998653 22578899999999999999999999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEeccccccccccccccccccccccccccc--CcCcHHHHHHHHhHhhhccccCCchhH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELL--LPNSVKGLKALLSVATYKKLWFPSCLY 215 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (320)
||||.+|+.+|.++|++|+++|++++.+....... ............... .......+...+...... ....+...
T Consensus 98 S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 175 (271)
T 1wom_A 98 SVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPP-EYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLN-QPDRPEIK 175 (271)
T ss_dssp THHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETT-TEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHC-CTTCHHHH
T ss_pred CHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCc-hhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhc-CCCchHHH
Confidence 99999999999999999999999998642211100 000000000000000 000000000000000000 01112222
Q ss_pred HHHHHHHhcC-hhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 216 KDFLEVMFAN-RKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
+.+...+... ......+.......+....+.++++|+++|+|++|.++|.+..+.+.+.++ ++++++++++||+++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~ 253 (271)
T 1wom_A 176 EELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP--YSSLKQMEARGHCPHM 253 (271)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSS--SEEEEEEEEESSCHHH
T ss_pred HHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCC--CCEEEEeCCCCcCccc
Confidence 2332222211 111111111222222233567889999999999999999999999999998 8999999999999999
Q ss_pred CChHHHHHHHHHHHHhh
Q 020916 295 ERPCAYNRCLKQFLASL 311 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~~ 311 (320)
++|+++++.|.+|+++.
T Consensus 254 e~p~~~~~~i~~fl~~~ 270 (271)
T 1wom_A 254 SHPDETIQLIGDYLKAH 270 (271)
T ss_dssp HCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhc
Confidence 99999999999999764
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=243.61 Aligned_cols=233 Identities=19% Similarity=0.215 Sum_probs=163.0
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
++++|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+. .++++.+++|+.++++.++.++++|+||||||
T Consensus 15 ~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~-~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg 92 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLD-NLGVLARDLVNDHNIIQVDVRNHGLSPREP-VMNYPAMAQDLVDTLDALQIDKATFIGHSMGG 92 (255)
T ss_dssp CCCCEEEECCTTCCTT-TTHHHHHHHTTTSCEEEECCTTSTTSCCCS-CCCHHHHHHHHHHHHHHHTCSCEEEEEETHHH
T ss_pred CCCCEEEEcCCcccHh-HHHHHHHHHHhhCcEEEecCCCCCCCCCCC-CcCHHHHHHHHHHHHHHcCCCCeeEEeeCccH
Confidence 6789999999999999 999999999888999999999999998654 67899999999999999999999999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccc-cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSI-NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLE 220 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (320)
.+|+.+|.++|++|+++|++++.+...... ......... ....... .........+. ..........++.
T Consensus 93 ~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~ 163 (255)
T 3bf7_A 93 KAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAIN--AVSESDA-QTRQQAAAIMR------QHLNEEGVIQFLL 163 (255)
T ss_dssp HHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHH--HHHHSCC-CSHHHHHHHHT------TTCCCHHHHHHHH
T ss_pred HHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHH--hcccccc-ccHHHHHHHHh------hhcchhHHHHHHH
Confidence 999999999999999999997643221110 000000000 0000000 00000000000 0111111111111
Q ss_pred HHhc------ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 221 VMFA------NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 221 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
.... ........+..+. ....++++++|+++|+|++|.+++++..+.+.+.++ ++++++++++||+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~ 238 (255)
T 3bf7_A 164 KSFVDGEWRFNVPVLWDQYPHIV---GWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP--QARAHVIAGAGHWVHA 238 (255)
T ss_dssp TTEETTEESSCHHHHHHTHHHHH---CCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCT--TEEECCBTTCCSCHHH
T ss_pred HhccCCceeecHHHHHhhhhhcc---ccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCC--CCeEEEeCCCCCcccc
Confidence 1100 0000011111111 112467899999999999999999998999999998 8999999999999999
Q ss_pred CChHHHHHHHHHHHHh
Q 020916 295 ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~ 310 (320)
|+|+++++.|.+|+++
T Consensus 239 e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 239 EKPDAVLRAIRRYLND 254 (255)
T ss_dssp HCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhc
Confidence 9999999999999975
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=241.96 Aligned_cols=262 Identities=16% Similarity=0.183 Sum_probs=174.6
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLF 100 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G 100 (320)
++..++...+|.+++|...|++ .++++|||+||++++.. .|..+++.|++.|+|+++|+||
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~------------------~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G 65 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGD------------------ISRPPVLCLPGLTRNAR-DFEDLATRLAGDWRVLCPEMRG 65 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBC------------------TTSCCEEEECCTTCCGG-GGHHHHHHHBBTBCEEEECCTT
T ss_pred cccCeeecCCCceEEEEEcCCC------------------CCCCcEEEECCCCcchh-hHHHHHHHhhcCCEEEeecCCC
Confidence 4455566668999999988751 12789999999999999 9999999999889999999999
Q ss_pred CCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 101 FGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 101 ~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
||.|+.+. ..++++.+++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.+.............
T Consensus 66 ~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 145 (285)
T 3bwx_A 66 RGDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGY 145 (285)
T ss_dssp BTTSCCCSSGGGCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHH
T ss_pred CCCCCCCCCccccCHHHHHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHH
Confidence 99998654 3578999999999999999999999999999999999999999999999999875432211100000000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhc-cccCCchhHHHHHHHHhcCh-hh------HHHHhhhhhcc---CCCC----
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYK-KLWFPSCLYKDFLEVMFANR-KE------RAELLEGLLIS---NKDP---- 243 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~---~~~~---- 243 (320)
.. ..............+...... ...........+........ .. .......+... ....
T Consensus 146 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (285)
T 3bwx_A 146 VG-----QGRNFETWMHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWP 220 (285)
T ss_dssp TT-----CCCEESSHHHHHHHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHH
T ss_pred hc-----CCcccccHHHHHHHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhH
Confidence 00 000001111111111111000 00111111222222211110 00 00000011000 0000
Q ss_pred CCCCC-CCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 244 TVPNF-PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 244 ~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
.+..+ ++|+|+|+|++|.+++++..+.+.+. + ++++++++++||+++.++|+.+ +.|.+||++
T Consensus 221 ~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~-~--~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 221 LFDALATRPLLVLRGETSDILSAQTAAKMASR-P--GVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp HHHHHTTSCEEEEEETTCSSSCHHHHHHHHTS-T--TEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred HHHHccCCCeEEEEeCCCCccCHHHHHHHHhC-C--CcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 11224 79999999999999999999999988 8 9999999999999999999987 579999965
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=251.33 Aligned_cols=255 Identities=15% Similarity=0.134 Sum_probs=172.5
Q ss_pred CCCceEEEcCCC----ceeeEeccCcccccCCCCcceEEEeeccCCC-CCeEEEEcCCCCCccccHHHHHHHhhcc-ceE
Q 020916 20 GVQPHAVEIEPG----TTMNFWVPRETIEKPKKGEKIIEKEALKKPS-KPVVVLVHGFAAEGIVTWQFQVGALTKK-YSV 93 (320)
Q Consensus 20 ~~~~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v 93 (320)
..+.+++++ +| .+++|...|+ ++ +++|||+||+++++. .|..+++.|+++ |+|
T Consensus 18 ~~~~~~~~~-~g~~~g~~l~y~~~G~-------------------~~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rv 76 (297)
T 2xt0_A 18 PYAPHYLEG-LPGFEGLRMHYVDEGP-------------------RDAEHTFLCLHGEPSWSF-LYRKMLPVFTAAGGRV 76 (297)
T ss_dssp CCCCEEECC-CTTCTTCCEEEEEESC-------------------TTCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEE
T ss_pred CCccEEEec-cCCCCceEEEEEEccC-------------------CCCCCeEEEECCCCCcce-eHHHHHHHHHhCCcEE
Confidence 456677888 56 9999988774 24 789999999999999 999999999988 999
Q ss_pred EecCCCCCCCCCCCCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 94 YIPDLLFFGGSITDEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 94 i~~d~~G~G~s~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
+++|+||||.|+.+.. .++.+.+++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.... ...
T Consensus 77 ia~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~-~~~ 155 (297)
T 2xt0_A 77 VAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAV-GLS 155 (297)
T ss_dssp EEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCS-SSC
T ss_pred EEeCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCc-ccC
Confidence 9999999999987653 6899999999999999999999999999999999999999999999999999985411 100
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChh---hHHHHhhhhh----------c
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK---ERAELLEGLL----------I 238 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----------~ 238 (320)
.......+.. .... .+... ....+.... ....+.....+...+ .... ....+..... .
T Consensus 156 ~~~~~~~~~~--~~~~-~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (297)
T 2xt0_A 156 PGKGFESWRD--FVAN-SPDLD--VGKLMQRAI---PGITDAEVAAYDAPF-PGPEFKAGVRRFPAIVPITPDMEGAEIG 226 (297)
T ss_dssp SCHHHHHHHH--HHHT-CTTCC--HHHHHHHHS---TTCCHHHHHHHHTTC-SSGGGCHHHHHGGGGSCCSTTSTTHHHH
T ss_pred CchhHHHHHH--Hhhc-ccccc--hhHHHhccC---ccCCHHHHHHHhccc-cCcchhHHHHHHHHhCccccccchhhHH
Confidence 0000000000 0000 00000 000000000 011111111111100 0000 0000000000 0
Q ss_pred cCCCCCCC-CCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEE--EecCCCcccccCChHHHHHHHHHHHH
Q 020916 239 SNKDPTVP-NFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ--GIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 239 ~~~~~~~~-~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
.+....+. ++++|+|+|+|++|.+++ +..+.+.+.++ +.+++ .++++||+++. +|+++++.|.+||+
T Consensus 227 ~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~~~~~~p--~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 227 RQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMGMLRQAI--RGCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHHHHHHHS--TTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred HHHHHHhhhccCCCeEEEEeCCCcccC-hHHHHHHHhCC--CCeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 00001345 789999999999999999 78888999998 65554 47899999999 99999999999985
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=247.99 Aligned_cols=269 Identities=17% Similarity=0.215 Sum_probs=187.4
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
.++.+++.+ ||.+++|...++ +++|+|||+||++++.. .|..+++.|++.|+|+++|+|
T Consensus 9 ~~~~~~~~~-~g~~l~~~~~g~-------------------~~~~~vl~lHG~~~~~~-~~~~~~~~l~~~~~v~~~d~~ 67 (299)
T 3g9x_A 9 PFDPHYVEV-LGERMHYVDVGP-------------------RDGTPVLFLHGNPTSSY-LWRNIIPHVAPSHRCIAPDLI 67 (299)
T ss_dssp CCCCEEEEE-TTEEEEEEEESC-------------------SSSCCEEEECCTTCCGG-GGTTTHHHHTTTSCEEEECCT
T ss_pred ccceeeeee-CCeEEEEEecCC-------------------CCCCEEEEECCCCccHH-HHHHHHHHHccCCEEEeeCCC
Confidence 467788888 799999998885 35789999999999999 999999999877999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc-cc--
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET-NL-- 176 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~-- 176 (320)
|||.|..+...++.+++++++.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++........... ..
T Consensus 68 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3g9x_A 68 GMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARE 147 (299)
T ss_dssp TSTTSCCCCCCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHH
T ss_pred CCCCCCCCCCcccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHH
Confidence 999999888789999999999999999999999999999999999999999999999999999554332111100 00
Q ss_pred --ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHH---HHhhhhhc-----------cC
Q 020916 177 --NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA---ELLEGLLI-----------SN 240 (320)
Q Consensus 177 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----------~~ 240 (320)
..+........................ ............+..... ...... .+...... .+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
T 3g9x_A 148 TFQAFRTADVGRELIIDQNAFIEGALPKC--VVRPLTEVEMDHYREPFL-KPVDREPLWRFPNELPIAGEPANIVALVEA 224 (299)
T ss_dssp HHHHHTSSSHHHHHHTTSCHHHHTHHHHT--CSSCCCHHHHHHHHGGGS-SGGGGHHHHHHHHHSCBTTBSHHHHHHHHH
T ss_pred HHHHHcCCCcchhhhccchhhHHHhhhhh--hccCCCHHHHHHHHHHhc-cccccchhhhhhhhhhhccccchhhhhhhh
Confidence 000000000000000000011111100 001112222222211111 000000 00000000 00
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 241 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
....+.++++|+++|+|++|.+++++..+.+.+.++ ++++++++++||+++.++|+++++.|.+++.+...+
T Consensus 225 ~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 225 YMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLP--NCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHHH 296 (299)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHST--TEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGCCC
T ss_pred hhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhCC--CCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhhhc
Confidence 011246678999999999999999999999999998 899999999999999999999999999999887654
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=247.29 Aligned_cols=267 Identities=17% Similarity=0.285 Sum_probs=175.0
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d 97 (320)
...+..++.+ +|.+++|...| ++|+|||+||++++.. .|..+++.|.+. |+|+++|
T Consensus 9 ~~~~~~~~~~-~g~~l~y~~~G---------------------~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~D 65 (328)
T 2cjp_A 9 KKIEHKMVAV-NGLNMHLAELG---------------------EGPTILFIHGFPELWY-SWRHQMVYLAERGYRAVAPD 65 (328)
T ss_dssp CCCEEEEEEE-TTEEEEEEEEC---------------------SSSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEEC
T ss_pred hhhheeEecC-CCcEEEEEEcC---------------------CCCEEEEECCCCCchH-HHHHHHHHHHHCCcEEEEEC
Confidence 3456667777 79999998776 3589999999999999 999999999876 9999999
Q ss_pred CCCCCCCCCC--C--CCCChhHHHHHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc-
Q 020916 98 LLFFGGSITD--E--ADRSPTFQAQCLATGLAKLG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS- 170 (320)
Q Consensus 98 ~~G~G~s~~~--~--~~~~~~~~~~~l~~~l~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~- 170 (320)
+||||.|+.+ . ..++++.+++|+.+++++++ .++++|+||||||.+|+.+|.++|++|+++|+++++......
T Consensus 66 l~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~ 145 (328)
T 2cjp_A 66 LRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPK 145 (328)
T ss_dssp CTTSTTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSS
T ss_pred CCCCCCCCCcCcCCcccccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCccccc
Confidence 9999999876 2 35789999999999999999 999999999999999999999999999999999875422110
Q ss_pred -ccccccccc-ccccccccc-CcCc----HH--HHHHHHhHhhh---c---------------------cccCCchhHHH
Q 020916 171 -INETNLNRL-GVSSSSELL-LPNS----VK--GLKALLSVATY---K---------------------KLWFPSCLYKD 217 (320)
Q Consensus 171 -~~~~~~~~~-~~~~~~~~~-~~~~----~~--~~~~~~~~~~~---~---------------------~~~~~~~~~~~ 217 (320)
......... ........+ .+.. .. .....+..... . ..+........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (328)
T 2cjp_A 146 MNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDY 225 (328)
T ss_dssp CCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHH
T ss_pred CChHHHHHhhcccchHHHhhhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHH
Confidence 000000000 000000000 0000 00 01111111110 0 00111111112
Q ss_pred HHHHHhc-ChhhHHHHhhhhhc---cCCCCCCCCCCCcEEEEecCCCCCCCHH----HH--HHHHHHhCCCCe-EEEEec
Q 020916 218 FLEVMFA-NRKERAELLEGLLI---SNKDPTVPNFPQRVHLLWGEDDQIFNVE----LA--HNMKEQLGADHV-TFQGIK 286 (320)
Q Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~----~~--~~~~~~~~~~~~-~~~~~~ 286 (320)
+...+.. ........+..+.. ......+..+++|+++|+|++|.++|+. .. +.+.+.++ +. ++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~i~ 303 (328)
T 2cjp_A 226 YANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVP--LLEEVVVLE 303 (328)
T ss_dssp HHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHST--TBCCCEEET
T ss_pred HHHHhcccCCcchHHHHHhcccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhc--CCeeEEEcC
Confidence 2111110 00000001111000 0001135788999999999999998863 22 56777777 88 899999
Q ss_pred CCCcccccCChHHHHHHHHHHHHh
Q 020916 287 KAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 287 ~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++||+++.|+|+++++.|.+||++
T Consensus 304 ~~gH~~~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 304 GAAHFVSQERPHEISKHIYDFIQK 327 (328)
T ss_dssp TCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred CCCCCcchhCHHHHHHHHHHHHHh
Confidence 999999999999999999999964
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=249.88 Aligned_cols=270 Identities=15% Similarity=0.204 Sum_probs=186.1
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHH-hhccceEEecCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA-LTKKYSVYIPDL 98 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~-l~~~~~vi~~d~ 98 (320)
.++.+++.+ +|.+++|...| ++|+|||+||++++.. .|..+++. +.+.|+|+++|+
T Consensus 8 ~~~~~~~~~-~g~~l~~~~~g---------------------~~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~ 64 (309)
T 3u1t_A 8 PFAKRTVEV-EGATIAYVDEG---------------------SGQPVLFLHGNPTSSY-LWRNIIPYVVAAGYRAVAPDL 64 (309)
T ss_dssp CCCCEEEEE-TTEEEEEEEEE---------------------CSSEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECC
T ss_pred cccceEEEE-CCeEEEEEEcC---------------------CCCEEEEECCCcchhh-hHHHHHHHHHhCCCEEEEEcc
Confidence 467788888 79999998877 4789999999999999 99999999 555599999999
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc-c-
Q 020916 99 LFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN-L- 176 (320)
Q Consensus 99 ~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~- 176 (320)
||||.|..+...++.+++++++.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++............ .
T Consensus 65 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 144 (309)
T 3u1t_A 65 IGMGDSAKPDIEYRLQDHVAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMG 144 (309)
T ss_dssp TTSTTSCCCSSCCCHHHHHHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGH
T ss_pred CCCCCCCCCCcccCHHHHHHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccc
Confidence 99999998877899999999999999999999999999999999999999999999999999998764331110000 0
Q ss_pred -------ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhcc----------
Q 020916 177 -------NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLIS---------- 239 (320)
Q Consensus 177 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 239 (320)
......................++... .............+...... ..............
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
T 3u1t_A 145 PQLGPLFRDLRTADVGEKMVLDGNFFVETILPEM-GVVRSLSEAEMAAYRAPFPT-RQSRLPTLQWPREVPIGGEPAFAE 222 (309)
T ss_dssp HHHHHHHHHHTSTTHHHHHHTTTCHHHHTHHHHT-SCSSCCCHHHHHHHHTTCCS-TGGGHHHHHHHHHSCBTTBSHHHH
T ss_pred hhhhHHHHHHhccchhhhhccccceehhhhcccc-cccccCCHHHHHHHHHhcCC-ccccchHHHHHHHhccccccchhh
Confidence 000000000000000000001111000 00111222222222111110 00000000000000
Q ss_pred ----CCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhcc
Q 020916 240 ----NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHADE 315 (320)
Q Consensus 240 ----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 315 (320)
+....+.++++|+++|+|++|.++|.+..+.+.+.++ +.++++++++||+++.++|+++++.|.+||++.....
T Consensus 223 ~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~ 300 (309)
T 3u1t_A 223 AEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSENVP--NLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPHA 300 (309)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHST--TEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhhhhhhcccCCCCEEEEecCCCCCCCHHHHHHHHhhCC--CCEEEEecCCcccchhhCHHHHHHHHHHHHHhcchhh
Confidence 0011245678999999999999999999999999998 8899999999999999999999999999999987654
Q ss_pred c
Q 020916 316 Q 316 (320)
Q Consensus 316 ~ 316 (320)
.
T Consensus 301 ~ 301 (309)
T 3u1t_A 301 S 301 (309)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=244.64 Aligned_cols=254 Identities=13% Similarity=0.166 Sum_probs=180.3
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLF 100 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G 100 (320)
.+.+++++ +|.+++|...| ++|+|||+||++++.. .|..+++.|++.|+|+++|+||
T Consensus 3 ~~~~~~~~-~~~~~~y~~~g---------------------~~~~vv~~HG~~~~~~-~~~~~~~~L~~~~~vi~~d~~G 59 (278)
T 3oos_A 3 WTTNIIKT-PRGKFEYFLKG---------------------EGPPLCVTHLYSEYND-NGNTFANPFTDHYSVYLVNLKG 59 (278)
T ss_dssp CEEEEEEE-TTEEEEEEEEC---------------------SSSEEEECCSSEECCT-TCCTTTGGGGGTSEEEEECCTT
T ss_pred cccCcEec-CCceEEEEecC---------------------CCCeEEEEcCCCcchH-HHHHHHHHhhcCceEEEEcCCC
Confidence 46678888 68899998776 5689999999999999 8999999998889999999999
Q ss_pred CCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 101 FGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 101 ~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
||.|..+. ..++.+++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++.............
T Consensus 60 ~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~-- 137 (278)
T 3oos_A 60 CGNSDSAKNDSEYSMTETIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSI-- 137 (278)
T ss_dssp STTSCCCSSGGGGSHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTST--
T ss_pred CCCCCCCCCcccCcHHHHHHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchh--
Confidence 99998765 35789999999999999999999999999999999999999999999999999988752111100000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhcc----------------ccCCchhHHHHHHHHhcC--hhhHHHHhh--hhhc
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYKK----------------LWFPSCLYKDFLEVMFAN--RKERAELLE--GLLI 238 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~ 238 (320)
..........+........... ..........+....... .......+. .+..
T Consensus 138 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (278)
T 3oos_A 138 -------YCSKNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKD 210 (278)
T ss_dssp -------TSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGG
T ss_pred -------hhhhchhHHHHHHHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhccccc
Confidence 0000111111111111111000 000111111110000000 001111111 1222
Q ss_pred cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 239 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
.+....+.++++|+++|+|++|.++|.+..+.+.+.++ ++++++++++||+++.++|+++++.|.+||
T Consensus 211 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 211 YDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIP--NATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp CBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST--TEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred ccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCC--CcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 22334567789999999999999999999999999998 899999999999999999999999999885
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=244.68 Aligned_cols=267 Identities=18% Similarity=0.204 Sum_probs=179.5
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDL 98 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~ 98 (320)
.+++.+++.+ ||.+++|...| ++|+|||+||++++.. .|..+++.|.+.|+|+++|+
T Consensus 11 ~~~~~~~~~~-~g~~l~~~~~g---------------------~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~v~~~D~ 67 (306)
T 3r40_A 11 PGFGSEWINT-SSGRIFARVGG---------------------DGPPLLLLHGFPQTHV-MWHRVAPKLAERFKVIVADL 67 (306)
T ss_dssp TTCEEEEECC-TTCCEEEEEEE---------------------CSSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECC
T ss_pred cCCceEEEEe-CCEEEEEEEcC---------------------CCCeEEEECCCCCCHH-HHHHHHHHhccCCeEEEeCC
Confidence 3567777877 79999998876 4689999999999999 99999999998999999999
Q ss_pred CCCCCCCCCCC-----CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 99 LFFGGSITDEA-----DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 99 ~G~G~s~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
||||.|+.+.. .++.+++++++.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++.+........
T Consensus 68 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 147 (306)
T 3r40_A 68 PGYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRM 147 (306)
T ss_dssp TTSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHC
T ss_pred CCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhh
Confidence 99999998775 5789999999999999999999999999999999999999999999999999985432111000
Q ss_pred c--ccccc-------cccccccccCc-CcHHHHHHHHhHhhhc--cccCCchhHHHHHHHHhcChhhHH---HHhhhhhc
Q 020916 174 T--NLNRL-------GVSSSSELLLP-NSVKGLKALLSVATYK--KLWFPSCLYKDFLEVMFANRKERA---ELLEGLLI 238 (320)
Q Consensus 174 ~--~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 238 (320)
. ..... ........... .....+...+...... .........+.+...+. ...... ..+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 226 (306)
T 3r40_A 148 NRAYALKIYHWSFLAQPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFA-DPMRRHVMCEDYRAGAY 226 (306)
T ss_dssp SHHHHHHSTHHHHHTSCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHT-SHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhHHHHHhhcccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHc-cCCCcchhhHHHHhccc
Confidence 0 00000 00000000001 1111122222222211 22333344444433222 111111 11111100
Q ss_pred cCCC------CCCCCCCCcEEEEecCCCCCCC-HHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 239 SNKD------PTVPNFPQRVHLLWGEDDQIFN-VELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 239 ~~~~------~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
.... ..+..+++|+++|+|++|.+++ ....+.+.+..+ +.+++++ ++||+++.++|+++++.|.+||++.
T Consensus 227 ~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 227 ADFEHDKIDVEAGNKIPVPMLALWGASGIAQSAATPLDVWRKWAS--DVQGAPI-ESGHFLPEEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp HHHHHHHHHHHHTCCBCSCEEEEEETTCC------CHHHHHHHBS--SEEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC-
T ss_pred ccchhhhhhhhhccCCCcceEEEEecCCcccCchhHHHHHHhhcC--CCeEEEe-cCCcCchhhChHHHHHHHHHHHHhc
Confidence 0000 1357899999999999999998 455666666666 8999999 6899999999999999999999875
Q ss_pred h
Q 020916 312 H 312 (320)
Q Consensus 312 ~ 312 (320)
.
T Consensus 304 ~ 304 (306)
T 3r40_A 304 P 304 (306)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=247.01 Aligned_cols=263 Identities=15% Similarity=0.235 Sum_probs=173.1
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
+.+++.+ +|.+++|...|+ +.+|+|||+||++++.. .|..+++.|++.++|+++|+|||
T Consensus 22 ~~~~~~~-~g~~l~y~~~G~-------------------g~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~Gh 80 (318)
T 2psd_A 22 RCKQMNV-LDSFINYYDSEK-------------------HAENAVIFLHGNATSSY-LWRHVVPHIEPVARCIIPDLIGM 80 (318)
T ss_dssp HCEEEEE-TTEEEEEEECCS-------------------CTTSEEEEECCTTCCGG-GGTTTGGGTTTTSEEEEECCTTS
T ss_pred cceEEee-CCeEEEEEEcCC-------------------CCCCeEEEECCCCCcHH-HHHHHHHHhhhcCeEEEEeCCCC
Confidence 4467777 799999988775 34579999999999999 99999999988899999999999
Q ss_pred CCCCCCC-CCCChhHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc---ccc--
Q 020916 102 GGSITDE-ADRSPTFQAQCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI---NET-- 174 (320)
Q Consensus 102 G~s~~~~-~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~-- 174 (320)
|.|+.+. ..++++++++|+.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++........ ...
T Consensus 81 G~S~~~~~~~~~~~~~a~dl~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~ 160 (318)
T 2psd_A 81 GKSGKSGNGSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEE 160 (318)
T ss_dssp TTCCCCTTSCCSHHHHHHHHHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHH
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHH
Confidence 9998764 348899999999999999998 899999999999999999999999999999998643211000 000
Q ss_pred ccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcC---hhhHHHHhhhhhc------------c
Q 020916 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN---RKERAELLEGLLI------------S 239 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------~ 239 (320)
....+............ .......+... ......++....+....... ......+...+.. .
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (318)
T 2psd_A 161 DIALIKSEEGEKMVLEN-NFFVETVLPSK--IMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVR 237 (318)
T ss_dssp HHHHHHSTHHHHHHTTT-CHHHHTHHHHT--CSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHH
T ss_pred HHHHHhcccchhhhhcc-hHHHHhhcccc--ccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHH
Confidence 00000000000000000 00000000000 00011111111111111000 0000000000000 0
Q ss_pred CCCCCCCCC-CCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 240 NKDPTVPNF-PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 240 ~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+....+..+ ++|+|+|+|++| ++++ ..+.+.+.++ +.+++++ ++||+++.|+|+++++.|.+||++...
T Consensus 238 ~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~~~~~~~~~~--~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 307 (318)
T 2psd_A 238 NYNAYLRASDDLPKLFIESDPG-FFSN-AIVEGAKKFP--NTEFVKV-KGLHFLQEDAPDEMGKYIKSFVERVLK 307 (318)
T ss_dssp HHHHHHHTCTTSCEEEEEEEEC-SSHH-HHHHHHTTSS--SEEEEEE-EESSSGGGTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhccccCCCeEEEEeccc-cCcH-HHHHHHHhCC--CcEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHhhc
Confidence 000123456 899999999999 8887 8888888888 8899989 679999999999999999999987654
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=240.67 Aligned_cols=251 Identities=16% Similarity=0.152 Sum_probs=175.8
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGS 104 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s 104 (320)
++++ ||.+++|...++ +++|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|
T Consensus 3 ~~~~-~g~~l~~~~~g~-------------------~~~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~v~~~D~~G~G~S 61 (264)
T 3ibt_A 3 SLNV-NGTLMTYSESGD-------------------PHAPTLFLLSGWCQDHR-LFKNLAPLLARDFHVICPDWRGHDAK 61 (264)
T ss_dssp CCEE-TTEECCEEEESC-------------------SSSCEEEEECCTTCCGG-GGTTHHHHHTTTSEEEEECCTTCSTT
T ss_pred eEee-CCeEEEEEEeCC-------------------CCCCeEEEEcCCCCcHh-HHHHHHHHHHhcCcEEEEccccCCCC
Confidence 4566 799999988875 36889999999999999 99999999988899999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-ccccccEEEecccccccccccccccccccccc
Q 020916 105 ITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNRLGVSS 183 (320)
Q Consensus 105 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
..+...++.+++++|+.+++++++.++++|+|||+||.+++.+|.++ |++|+++|++++.. .........+...
T Consensus 62 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~~~~~~~~~~~---- 136 (264)
T 3ibt_A 62 QTDSGDFDSQTLAQDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPHPGFWQQLAEG---- 136 (264)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCCHHHHHHHHHT----
T ss_pred CCCccccCHHHHHHHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcChhhcchhhcc----
Confidence 98877899999999999999999999999999999999999999999 99999999999877 2111110000000
Q ss_pred cccccCcCcHHH-HHHHHhHhhhccccCCchhHHHHHHHHhcChhh-HHHHhhhhhc-----cCCCCCCCCCCCcEEEEe
Q 020916 184 SSELLLPNSVKG-LKALLSVATYKKLWFPSCLYKDFLEVMFANRKE-RAELLEGLLI-----SNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 184 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~P~l~i~ 256 (320)
........ .......... . .......+.+...+...... .......+.. ......+.++++|+++|+
T Consensus 137 ----~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 210 (264)
T 3ibt_A 137 ----QHPTEYVAGRQSFFDEWAE-T-TDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICH 210 (264)
T ss_dssp ----TCTTTHHHHHHHHHHHHHT-T-CCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEE
T ss_pred ----cChhhHHHHHHHHHHHhcc-c-CCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEE
Confidence 00111111 1111111111 1 11222222222222111110 1111111100 011134567899999996
Q ss_pred c--CCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 257 G--EDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 257 g--~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
| +.|...+.+..+.+.+.++ +.++++++++||+++.++|+++++.|.+||+
T Consensus 211 g~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 211 IYSQPLSQDYRQLQLEFAAGHS--WFHPRHIPGRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp EECCSCCHHHHHHHHHHHHHCT--TEEEEECCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred ecCCccchhhHHHHHHHHHhCC--CceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 5 4444555677788888888 8999999999999999999999999999985
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=240.25 Aligned_cols=265 Identities=17% Similarity=0.194 Sum_probs=177.0
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDL 98 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~ 98 (320)
.+++.+++++ +|.+++|...| ++++|||+||++++.. .|..+++.|++.|+|+++|+
T Consensus 3 ~~~~~~~~~~-~~~~~~~~~~g---------------------~g~~~vllHG~~~~~~-~w~~~~~~l~~~~~vi~~Dl 59 (291)
T 3qyj_A 3 TNFEQTIVDT-TEARINLVKAG---------------------HGAPLLLLHGYPQTHV-MWHKIAPLLANNFTVVATDL 59 (291)
T ss_dssp TTCEEEEEEC-SSCEEEEEEEC---------------------CSSEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECC
T ss_pred CCcceeEEec-CCeEEEEEEcC---------------------CCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcC
Confidence 3567788888 69999998776 5789999999999999 99999999988899999999
Q ss_pred CCCCCCCCCCCC-----CChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc-
Q 020916 99 LFFGGSITDEAD-----RSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN- 172 (320)
Q Consensus 99 ~G~G~s~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~- 172 (320)
||||.|..+... ++.+.+++|+.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+.......
T Consensus 60 ~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~ 139 (291)
T 3qyj_A 60 RGYGDSSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTT 139 (291)
T ss_dssp TTSTTSCCCCCCGGGGGGSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTC
T ss_pred CCCCCCCCCCCCccccccCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcc
Confidence 999999876543 78889999999999999999999999999999999999999999999999986542110000
Q ss_pred -cccccc---cccc----ccccccCcCcHH-HHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHH---HHhhhhh---
Q 020916 173 -ETNLNR---LGVS----SSSELLLPNSVK-GLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA---ELLEGLL--- 237 (320)
Q Consensus 173 -~~~~~~---~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--- 237 (320)
...... +... ............ .+...+.........+.++....+...+. ...... ..+....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 218 (291)
T 3qyj_A 140 DQEFATAYYHWFFLIQPDNLPETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFS-QPAVIHATCEDYRAAATID 218 (291)
T ss_dssp CHHHHHHTTHHHHTTCSTTHHHHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHT-SHHHHHHHHHHHHHHTTHH
T ss_pred hhhhhHHHHHHHHhccCCCchHHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhc-CCCcchhHHHHHHcccccc
Confidence 000000 0000 000000000011 11111111111112233444444444332 111111 1111100
Q ss_pred -ccCCCCCCCCCCCcEEEEecCCCCCCCH-HHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 238 -ISNKDPTVPNFPQRVHLLWGEDDQIFNV-ELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 238 -~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
..+....+.++++|+|+|+|++|.+.+. .....+.+..+ +.+..+++ +||+++.|+|+++++.|.+||+.
T Consensus 219 ~~~~~~~~~~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 219 LEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLATWRERAI--DVSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp HHHHHTTTTCCBCSCEEEEEETTSSHHHHSCHHHHHHTTBS--SEEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred hhhcchhcCCccccceEEEecccccccchhhHHHHHHhhcC--Ccceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 0111235678999999999999976432 23344455555 78888886 89999999999999999999974
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=242.10 Aligned_cols=238 Identities=17% Similarity=0.164 Sum_probs=156.6
Q ss_pred CCC-eEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 62 SKP-VVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~-~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
++| +|||+||++++.. .|..+++.|++.|+|+++|+||||.|..+ ..++++.+++++.+ .++ ++++|+|||||
T Consensus 11 ~g~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~l~~---~l~-~~~~lvGhS~G 84 (258)
T 1m33_A 11 QGNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGF-GALSLADMAEAVLQ---QAP-DKAIWLGWSLG 84 (258)
T ss_dssp CCSSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECCTTSTTCCSC-CCCCHHHHHHHHHT---TSC-SSEEEEEETHH
T ss_pred CCCCeEEEECCCCCChH-HHHHHHHHhhcCcEEEEeeCCCCCCCCCC-CCcCHHHHHHHHHH---HhC-CCeEEEEECHH
Confidence 356 9999999999999 99999999988899999999999999876 56788877766544 445 78999999999
Q ss_pred HHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc---CCchhHHH
Q 020916 141 GMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW---FPSCLYKD 217 (320)
Q Consensus 141 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 217 (320)
|.+|+.+|.++|++|+++|++++.+.................. +..................... ........
T Consensus 85 g~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (258)
T 1m33_A 85 GLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAG----FQQQLSDDQQRTVERFLALQTMGTETARQDARA 160 (258)
T ss_dssp HHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHH----HHHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHH
T ss_pred HHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHH----HHHHHhccHHHHHHHHHHHHhcCCccchhhHHH
Confidence 9999999999999999999998764322110000000000000 0000000000111111100000 00111111
Q ss_pred HHHHHhcC----hhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 218 FLEVMFAN----RKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 218 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
+....... ..........+...+....+.++++|+++|+|++|.+++.+..+.+.+.++ +.++++++++||+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~ 238 (258)
T 1m33_A 161 LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP--HSESYIFAKAAHAPF 238 (258)
T ss_dssp HHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT--TCEEEEETTCCSCHH
T ss_pred HHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCc--cceEEEeCCCCCCcc
Confidence 11111111 011111111222233445677889999999999999999888888888887 889999999999999
Q ss_pred cCChHHHHHHHHHHHHhh
Q 020916 294 LERPCAYNRCLKQFLASL 311 (320)
Q Consensus 294 ~~~~~~~~~~i~~fl~~~ 311 (320)
.++|+++++.|.+|+++.
T Consensus 239 ~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 239 ISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp HHSHHHHHHHHHHHHTTS
T ss_pred ccCHHHHHHHHHHHHHhc
Confidence 999999999999999764
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=238.48 Aligned_cols=243 Identities=18% Similarity=0.228 Sum_probs=172.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCC----CCCCCChhHHHHHHHHHHHHhCCCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSIT----DEADRSPTFQAQCLATGLAKLGVDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGh 137 (320)
++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|.. .....+++++++++.++++.++.++++|+||
T Consensus 19 ~~p~vv~~HG~~~~~~-~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gh 97 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQS-AWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDALGIDCCAYVGH 97 (269)
T ss_dssp CSSEEEEECCTTCCGG-GGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCEEEEEeCCCCcHH-HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 5689999999999999 9999999998899999999999999976 2233589999999999999999999999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccc-cccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN-LNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
|+||.+|+.+|.++|++|+++|++++............ .............. .....+...+..... .........
T Consensus 98 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~ 174 (269)
T 4dnp_A 98 SVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAME-ANYEAWVNGFAPLAV--GADVPAAVR 174 (269)
T ss_dssp THHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHH-HCHHHHHHHHHHHHH--CSSCHHHHH
T ss_pred CHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhcc-ccHHHHHHHhhhhhc--cCCChhHHH
Confidence 99999999999999999999999998754322211000 00000000000000 000001111111111 111222333
Q ss_pred HHHHHHhc-ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCC-eEEEEecCCCccccc
Q 020916 217 DFLEVMFA-NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADH-VTFQGIKKAGHLVHL 294 (320)
Q Consensus 217 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 294 (320)
.+...... ...........+...+....+.++++|+++|+|++|.+++++..+.+.+.++ + +++++++++||+++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~ 252 (269)
T 4dnp_A 175 EFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLG--GKNTVHWLNIEGHLPHL 252 (269)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSS--SCEEEEEEEEESSCHHH
T ss_pred HHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCC--CCceEEEeCCCCCCccc
Confidence 33333332 2223333344444444556677889999999999999999999999999998 5 899999999999999
Q ss_pred CChHHHHHHHHHHHHh
Q 020916 295 ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~ 310 (320)
++|+++++.|.+||++
T Consensus 253 ~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 253 SAPTLLAQELRRALSH 268 (269)
T ss_dssp HCHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHhh
Confidence 9999999999999965
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=239.71 Aligned_cols=261 Identities=17% Similarity=0.232 Sum_probs=170.6
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCC-CeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSK-PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDL 98 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~ 98 (320)
++..++.+ +|.+++|...|+ +++ ++|||+||++++.. .|...+..+.+. |+|+++|+
T Consensus 5 ~~~~~~~~-~g~~l~~~~~g~-------------------~~~~~~vvllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~ 63 (293)
T 1mtz_A 5 CIENYAKV-NGIYIYYKLCKA-------------------PEEKAKLMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQ 63 (293)
T ss_dssp CEEEEEEE-TTEEEEEEEECC-------------------SSCSEEEEEECCTTTCCS-GGGGGGGGGGGGTEEEEEECC
T ss_pred hcceEEEE-CCEEEEEEEECC-------------------CCCCCeEEEEeCCCCcch-hHHHHHHHHHhcCcEEEEecC
Confidence 45567777 699999988774 233 79999999876655 443344445555 99999999
Q ss_pred CCCCCCCCCC-CCCChhHHHHHHHHHHHHh-CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 99 LFFGGSITDE-ADRSPTFQAQCLATGLAKL-GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 99 ~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
||||.|+.+. ..++.+.+++|+.++++++ +.++++|+||||||.+|+.+|.++|++|+++|++++.......... .
T Consensus 64 ~G~G~S~~~~~~~~~~~~~~~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~ 141 (293)
T 1mtz_A 64 FGCGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKE--M 141 (293)
T ss_dssp TTSTTSCCCCGGGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHH--H
T ss_pred CCCccCCCCCCCcccHHHHHHHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHH--H
Confidence 9999998765 2378999999999999999 9999999999999999999999999999999999987542110000 0
Q ss_pred ccccccccccc-------------cCcC-cHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHH--------Hhh
Q 020916 177 NRLGVSSSSEL-------------LLPN-SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAE--------LLE 234 (320)
Q Consensus 177 ~~~~~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 234 (320)
.... ...... .... .......+...........++... ......... ..... ...
T Consensus 142 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 218 (293)
T 1mtz_A 142 NRLI-DELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVL-KSLEYAERR-NVYRIMNGPNEFTITG 218 (293)
T ss_dssp HHHH-HTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHH-HHHHHHHHS-SHHHHHTCSBTTBCCS
T ss_pred HHHH-HhcCHHHHHHHHHhhccCCcChHHHHHHHHHHHHhhcccccCchHHHH-HhHhhhccc-hhhhhccCcceecccc
Confidence 0000 000000 0000 000000011100000001111111 111100000 00000 000
Q ss_pred hhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 235 GLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 235 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
.+...+....+.++++|+|+|+|++| .+++...+.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 219 ~~~~~~~~~~l~~i~~P~lii~G~~D-~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 291 (293)
T 1mtz_A 219 TIKDWDITDKISAIKIPTLITVGEYD-EVTPNVARVIHEKIA--GSELHVFRDCSHLTMWEDREGYNKLLSDFILK 291 (293)
T ss_dssp TTTTCBCTTTGGGCCSCEEEEEETTC-SSCHHHHHHHHHHST--TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred cccCCChhhhhccCCCCEEEEeeCCC-CCCHHHHHHHHHhCC--CceEEEeCCCCCCccccCHHHHHHHHHHHHHh
Confidence 11112233456778999999999999 678888899999998 89999999999999999999999999999975
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=243.33 Aligned_cols=264 Identities=15% Similarity=0.133 Sum_probs=180.5
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
+.+++++ +|.+++|...| ++|+|||+||++++.. .|..+++.|.+.|+|+++|+|||
T Consensus 9 ~~~~~~~-~g~~l~~~~~g---------------------~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~ 65 (297)
T 2qvb_A 9 QPKYLEI-AGKRMAYIDEG---------------------KGDAIVFQHGNPTSSY-LWRNIMPHLEGLGRLVACDLIGM 65 (297)
T ss_dssp CCEEEEE-TTEEEEEEEES---------------------SSSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTS
T ss_pred CceEEEE-CCEEEEEEecC---------------------CCCeEEEECCCCchHH-HHHHHHHHHhhcCeEEEEcCCCC
Confidence 4567777 79999998877 3689999999999999 99999999988899999999999
Q ss_pred CCCCCCCCC----CChhHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc-ccc
Q 020916 102 GGSITDEAD----RSPTFQAQCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN-ETN 175 (320)
Q Consensus 102 G~s~~~~~~----~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~ 175 (320)
|.|..+... ++.+++++++.+++++++. ++++++|||+||.+++.+|.++|++|+++|++++......... ...
T Consensus 66 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 145 (297)
T 2qvb_A 66 GASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPA 145 (297)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGG
T ss_pred CCCCCCCCccccCcCHHHHHHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChH
Confidence 999877655 8999999999999999999 9999999999999999999999999999999998764221100 000
Q ss_pred cccccccccccccCcCcHHHHHHHHhHhhh--ccccCCchhHHHHHHHHhcC---hhhHHHHhhhhh-----------cc
Q 020916 176 LNRLGVSSSSELLLPNSVKGLKALLSVATY--KKLWFPSCLYKDFLEVMFAN---RKERAELLEGLL-----------IS 239 (320)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----------~~ 239 (320)
.... ..................++..... .......+....+....... ......+...+. ..
T Consensus 146 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (297)
T 2qvb_A 146 VRGV-FQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVN 224 (297)
T ss_dssp GHHH-HHHHTSTTHHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHH
T ss_pred HHHH-HHHHhcccchhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHH
Confidence 0000 0000000000000000001100000 01111222222222111110 001111111110 00
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 240 NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 240 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+....+.++++|+|+|+|++|.+++.+..+.+.+.++ + +++++ ++||+++.++|+++++.|.+||+++..
T Consensus 225 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~~~ 294 (297)
T 2qvb_A 225 EYRSWLEETDMPKLFINAEPGAIITGRIRDYVRSWPN--Q-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRLRS 294 (297)
T ss_dssp HHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHTSSS--E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccccccEEEEecCCCCcCCHHHHHHHHHHcC--C-eEEEe-cCccchhhhCHHHHHHHHHHHHHHHhh
Confidence 1112345678999999999999999999999999998 7 99999 999999999999999999999998754
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=241.57 Aligned_cols=225 Identities=15% Similarity=0.190 Sum_probs=160.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh--CCCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL--GVDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~lvGh 137 (320)
++++.|||+||+++++. .|..+++.|++. |+|+++|+||||.|.......+..++++|+.++++.+ +.++++|+||
T Consensus 49 G~~~~VlllHG~~~s~~-~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~v~lvG~ 127 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQ-SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEERCDVLFMTGL 127 (281)
T ss_dssp CSSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCCceEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEEEEEE
Confidence 35667999999999999 999999999988 9999999999999976555678889999999999987 4679999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccc----cccccccccCcCcHHHHHHHHhHhhhccccCCch
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL----GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSC 213 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (320)
||||.+++.+|.++|++|+++|++++................ ............... ...+ ...+..
T Consensus 128 S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~ 198 (281)
T 4fbl_A 128 SMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVK-------ELAY--PVTPVP 198 (281)
T ss_dssp THHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCC-------CCCC--SEEEGG
T ss_pred CcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHH-------Hhhh--ccCchH
Confidence 999999999999999999999999987643322111000000 000000000000000 0000 000001
Q ss_pred hHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 214 LYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
....+.... ... ...++++++|+|+|+|++|.++|++.++.+.+.++..++++++++++||+++
T Consensus 199 ~~~~~~~~~--------~~~--------~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~ 262 (281)
T 4fbl_A 199 AIKHLITIG--------AVA--------EMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVAT 262 (281)
T ss_dssp GHHHHHHHH--------HHH--------HHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGG
T ss_pred HHHHHHHhh--------hhc--------cccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCc
Confidence 111111100 000 0135678999999999999999999999999999755789999999999998
Q ss_pred cC-ChHHHHHHHHHHHHhh
Q 020916 294 LE-RPCAYNRCLKQFLASL 311 (320)
Q Consensus 294 ~~-~~~~~~~~i~~fl~~~ 311 (320)
.+ +++++.+.|.+||+++
T Consensus 263 ~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 263 LDNDKELILERSLAFIRKH 281 (281)
T ss_dssp GSTTHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhC
Confidence 87 5899999999999863
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=241.01 Aligned_cols=263 Identities=14% Similarity=0.140 Sum_probs=181.0
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
+.+++.. ||.+++|...+ ++|+|||+||++++.. .|..+++.|++.|+|+++|+|||
T Consensus 10 ~~~~~~~-~g~~l~~~~~g---------------------~~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~ 66 (302)
T 1mj5_A 10 EKKFIEI-KGRRMAYIDEG---------------------TGDPILFQHGNPTSSY-LWRNIMPHCAGLGRLIACDLIGM 66 (302)
T ss_dssp CCEEEEE-TTEEEEEEEES---------------------CSSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTS
T ss_pred cceEEEE-CCEEEEEEEcC---------------------CCCEEEEECCCCCchh-hhHHHHHHhccCCeEEEEcCCCC
Confidence 3456777 79999998877 4689999999999999 99999999988899999999999
Q ss_pred CCCCCCCCC----CChhHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc--cc
Q 020916 102 GGSITDEAD----RSPTFQAQCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN--ET 174 (320)
Q Consensus 102 G~s~~~~~~----~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~ 174 (320)
|.|..+... ++.+++++++.+++++++. ++++|+|||+||.+++.+|.++|++|+++|++++......... ..
T Consensus 67 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 146 (302)
T 1mj5_A 67 GDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQ 146 (302)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGG
T ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHH
Confidence 999977655 8999999999999999998 9999999999999999999999999999999998764221100 00
Q ss_pred ---ccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcC---hhhHHHHhhhhh-----------
Q 020916 175 ---NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN---RKERAELLEGLL----------- 237 (320)
Q Consensus 175 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------- 237 (320)
....+.... ...............+... .......+....+....... ......+...+.
T Consensus 147 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T 1mj5_A 147 DRDLFQAFRSQA-GEELVLQDNVFVEQVLPGL--ILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAI 223 (302)
T ss_dssp GHHHHHHHHSTT-HHHHHTTTCHHHHTHHHHT--SSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHH
T ss_pred HHHHHHHHhccc-hhhhhcChHHHHHHHHHhc--CcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHH
Confidence 000000000 0000000000001111100 01112222222222211110 000111111110
Q ss_pred ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 238 ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 238 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
..+....+.++++|+++|+|++|.++|++..+.+.+.++ + +++++ ++||+++.++|+++++.|.+|+++....
T Consensus 224 ~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 296 (302)
T 1mj5_A 224 ARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPN--Q-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLRPA 296 (302)
T ss_dssp HHHHHHHHTTCCSCEEEEEEEECSSSSHHHHHHHTTCSS--E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHhhhhccCCCeEEEEeCCCCCCChHHHHHHHHhcC--C-ceEEe-cCcCcccccCHHHHHHHHHHHHHhhccc
Confidence 001112456789999999999999999999999999888 7 99999 9999999999999999999999986643
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=229.22 Aligned_cols=251 Identities=16% Similarity=0.108 Sum_probs=174.0
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG 103 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~ 103 (320)
.++...||.+++|...+ ++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.
T Consensus 5 ~~~~~~~g~~l~~~~~g---------------------~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~ 62 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSG---------------------SGPPVVLVGGALSTRA-GGAPLAERLAPHFTVICYDRRGRGD 62 (262)
T ss_dssp CEEECTTSCEEEEEEEE---------------------CSSEEEEECCTTCCGG-GGHHHHHHHTTTSEEEEECCTTSTT
T ss_pred heEEcCCCcEEEEEEcC---------------------CCCcEEEECCCCcChH-HHHHHHHHHhcCcEEEEEecCCCcC
Confidence 34555589999998876 4689999999999999 9999999999669999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSS 183 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
|..+. .++++++++|+.+++++++ ++++++|||+||.+++.+|.++| +|+++|++++............... ...
T Consensus 63 S~~~~-~~~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~--~~~ 137 (262)
T 3r0v_A 63 SGDTP-PYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDY--QTR 137 (262)
T ss_dssp CCCCS-SCCHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTH--HHH
T ss_pred CCCCC-CCCHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHH--HHH
Confidence 98765 7899999999999999999 99999999999999999999999 9999999998765433221100000 000
Q ss_pred cccccCcCcHH-HHHHHHhHhhhccccCCchhHHHHHHHHh-----cChhhHH-HHhhhhhccCCCCCCCCCCCcEEEEe
Q 020916 184 SSELLLPNSVK-GLKALLSVATYKKLWFPSCLYKDFLEVMF-----ANRKERA-ELLEGLLISNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 184 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (320)
........... ....+... ....++...+.+..... ....... ..............+.++++|+++|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 213 (262)
T 3r0v_A 138 LDALLAEGRRGDAVTYFMTE----GVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMD 213 (262)
T ss_dssp HHHHHHTTCHHHHHHHHHHH----TSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEE
T ss_pred HHHHhhccchhhHHHHHhhc----ccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEe
Confidence 00000000111 11111111 11122222222221100 0000000 00000001111245677899999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
|++|.++|++..+.+.+.++ ++++++++++|| +++|+++++.|.+||++
T Consensus 214 G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 214 GGASPAWIRHTAQELADTIP--NARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp CTTCCHHHHHHHHHHHHHST--TEEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred ecCCCCCCHHHHHHHHHhCC--CCeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 99999999999999999998 899999999999 46899999999999863
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=233.93 Aligned_cols=246 Identities=20% Similarity=0.259 Sum_probs=173.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFS 138 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS 138 (320)
+++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..+.. .++.+++++++.++++.++.++++|+|||
T Consensus 44 ~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 122 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAG-TWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERLGVARASVIGHS 122 (315)
T ss_dssp CCSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCCCeEEEEcCCCCcch-HHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57899999999999999 999999999997 9999999999999987765 78999999999999999999999999999
Q ss_pred hhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc-hhHHH
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS-CLYKD 217 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 217 (320)
+||.+++.+|.++|++|+++|++++.......... .................................+.+. .....
T Consensus 123 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (315)
T 4f0j_A 123 MGGMLATRYALLYPRQVERLVLVNPIGLEDWKALG--VPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQ 200 (315)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHT--CCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHH
T ss_pred HHHHHHHHHHHhCcHhhheeEEecCcccCCccccc--chhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHH
Confidence 99999999999999999999999986432111000 0000000000111112222233333322222211111 11111
Q ss_pred HHHHHhcChhhH-H-----HHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCC----------------HHHHHHHHHHh
Q 020916 218 FLEVMFANRKER-A-----ELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFN----------------VELAHNMKEQL 275 (320)
Q Consensus 218 ~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~----------------~~~~~~~~~~~ 275 (320)
............ . .........+....+.++++|+++++|++|.++| .+..+.+.+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (315)
T 4f0j_A 201 MQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRI 280 (315)
T ss_dssp HHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHS
T ss_pred HHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhc
Confidence 111111111100 0 0111122223335677889999999999999999 88889999998
Q ss_pred CCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 276 GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 276 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+ ++++++++++||+++.++|+++++.|.+||++.
T Consensus 281 ~--~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 281 P--QATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp T--TEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred C--CceEEEeCCCCcchhhhCHHHHHHHHHHHhccC
Confidence 8 999999999999999999999999999999753
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-35 Score=236.86 Aligned_cols=259 Identities=18% Similarity=0.181 Sum_probs=184.5
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
.++.+++++ +|.+++|...+ ++|+||++||++++.. .|..+++.|+++|+|+++|+|
T Consensus 47 ~~~~~~~~~-~~~~~~~~~~g---------------------~~p~vv~lhG~~~~~~-~~~~~~~~L~~~~~v~~~D~~ 103 (314)
T 3kxp_A 47 HFISRRVDI-GRITLNVREKG---------------------SGPLMLFFHGITSNSA-VFEPLMIRLSDRFTTIAVDQR 103 (314)
T ss_dssp CCEEEEEEC-SSCEEEEEEEC---------------------CSSEEEEECCTTCCGG-GGHHHHHTTTTTSEEEEECCT
T ss_pred CcceeeEEE-CCEEEEEEecC---------------------CCCEEEEECCCCCCHH-HHHHHHHHHHcCCeEEEEeCC
Confidence 456667777 68889987766 4789999999999999 999999999988999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 179 (320)
|+|.|..+...++.+++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++.+..............
T Consensus 104 G~G~S~~~~~~~~~~~~~~dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 183 (314)
T 3kxp_A 104 GHGLSDKPETGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARV 183 (314)
T ss_dssp TSTTSCCCSSCCSHHHHHHHHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHT
T ss_pred CcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHh
Confidence 99999977777899999999999999999999999999999999999999999999999999987643322111110000
Q ss_pred cccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcCh---------hhHHHHhhhhhccCCCCCCCCCCC
Q 020916 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANR---------KERAELLEGLLISNKDPTVPNFPQ 250 (320)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 250 (320)
. ...............+... ...........+........ .............+....+.++++
T Consensus 184 ~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (314)
T 3kxp_A 184 N----AGSQLFEDIKAVEAYLAGR---YPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTK 256 (314)
T ss_dssp T----TTCSCBSSHHHHHHHHHHH---STTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCS
T ss_pred h----hchhhhcCHHHHHHHHHhh---cccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCC
Confidence 0 0000011111111111111 11122222222222211100 000000000000012233456899
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
|+|+|+|++|.+++.+..+.+.+.++ ++++++++|+||+++.++|+++.+.|.+||++
T Consensus 257 P~Lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 257 PVLIVRGESSKLVSAAALAKTSRLRP--DLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHCT--TSCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred CEEEEecCCCccCCHHHHHHHHHhCC--CceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 99999999999999999999999998 89999999999999999999999999999974
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=241.05 Aligned_cols=264 Identities=17% Similarity=0.276 Sum_probs=182.4
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHH-hhccceEEecCCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA-LTKKYSVYIPDLL 99 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~-l~~~~~vi~~d~~ 99 (320)
++.++++++ |.+++|+..++ ++|+|||+||++++.. .|..+++. +.+.|+|+++|+|
T Consensus 3 ~~~~~~~~~-~~~~~~~~~~~--------------------~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~ 60 (279)
T 4g9e_A 3 INYHELETS-HGRIAVRESEG--------------------EGAPLLMIHGNSSSGA-IFAPQLEGEIGKKWRVIAPDLP 60 (279)
T ss_dssp CEEEEEEET-TEEEEEEECCC--------------------CEEEEEEECCTTCCGG-GGHHHHHSHHHHHEEEEEECCT
T ss_pred eEEEEEEcC-CceEEEEecCC--------------------CCCeEEEECCCCCchh-HHHHHHhHHHhcCCeEEeecCC
Confidence 456788885 55899988774 6789999999999999 99999998 4445999999999
Q ss_pred CCCCCCCCC---CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 100 FFGGSITDE---ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 100 G~G~s~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
|||.|..+. ..++.+++++++.++++.++.++++|+|||+||.+++.+|.++|+ +.++|+++++............
T Consensus 61 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~ 139 (279)
T 4g9e_A 61 GHGKSTDAIDPDRSYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFK 139 (279)
T ss_dssp TSTTSCCCSCHHHHSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBC
T ss_pred CCCCCCCCCCcccCCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhc
Confidence 999998753 347899999999999999999999999999999999999999998 8999999887654332211111
Q ss_pred ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhc---cCCCCCCCCCCCcEE
Q 020916 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI---SNKDPTVPNFPQRVH 253 (320)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l 253 (320)
....... .............+........ ........+.. ............+.. .+....+..+++|++
T Consensus 140 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 212 (279)
T 4g9e_A 140 SGPDMAL--AGQEIFSERDVESYARSTCGEP--FEASLLDIVAR---TDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIA 212 (279)
T ss_dssp CSTTGGG--GGCSCCCHHHHHHHHHHHHCSS--CCHHHHHHHHH---SCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEE
T ss_pred cchhhhh--cCcccccHHHHHHHHHhhccCc--ccHHHHHHHHh---hhccchHHHHHHhhccCCchHHHHHHhcCCCEE
Confidence 0000000 0001111122222222221111 11111111111 111111111111111 111123456789999
Q ss_pred EEecCCCCCCCHHHHHHHH-HHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhccc
Q 020916 254 LLWGEDDQIFNVELAHNMK-EQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHADEQ 316 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~ 316 (320)
+|+|++|.++|.+..+.+. +.++ ++++++++++||+++.++|+++++.|.+||++......
T Consensus 213 ~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~~ 274 (279)
T 4g9e_A 213 VVNGRDEPFVELDFVSKVKFGNLW--EGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQLEH 274 (279)
T ss_dssp EEEETTCSSBCHHHHTTCCCSSBG--GGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHSSCC
T ss_pred EEEcCCCcccchHHHHHHhhccCC--CCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999888887 6666 88999999999999999999999999999998775443
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-35 Score=231.51 Aligned_cols=260 Identities=19% Similarity=0.253 Sum_probs=181.7
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d 97 (320)
.+++.+++.+ +|.+++|...++ +++|+|||+||++++.. .|..+++.|.+. |+|+++|
T Consensus 2 ~~~~~~~~~~-~g~~l~~~~~g~-------------------~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d 60 (286)
T 3qit_A 2 NAMEEKFLEF-GGNQICLCSWGS-------------------PEHPVVLCIHGILEQGL-AWQEVALPLAAQGYRVVAPD 60 (286)
T ss_dssp CCCEEEEEEE-TTEEEEEEEESC-------------------TTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEEC
T ss_pred chhhhheeec-CCceEEEeecCC-------------------CCCCEEEEECCCCcccc-hHHHHHHHhhhcCeEEEEEC
Confidence 3577788888 799999998886 46899999999999999 999999999998 9999999
Q ss_pred CCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc
Q 020916 98 LLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175 (320)
Q Consensus 98 ~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 175 (320)
+||+|.|..+. ..++.+++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++............
T Consensus 61 ~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 140 (286)
T 3qit_A 61 LFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESA 140 (286)
T ss_dssp CTTSTTSCCCSSGGGCSHHHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCH
T ss_pred CCCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhh
Confidence 99999998776 5688999999999999999999999999999999999999999999999999998875443321111
Q ss_pred cccccc--cccccc----cCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhh----------HHHHhhhh---
Q 020916 176 LNRLGV--SSSSEL----LLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKE----------RAELLEGL--- 236 (320)
Q Consensus 176 ~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~--- 236 (320)
...+.. ...... .......... ................+.......... ........
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (286)
T 3qit_A 141 VNQLTTCLDYLSSTPQHPIFPDVATAAS----RLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNL 216 (286)
T ss_dssp HHHHHHHHHHHTCCCCCCCBSSHHHHHH----HHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSC
T ss_pred hHHHHHHHHHHhccccccccccHHHHHH----HhhcCCcccCHHHHHHHhhccccccccceeeeechhhhcccccccccc
Confidence 100000 000000 0001111110 011111122223333333222110000 00000000
Q ss_pred --hccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHH
Q 020916 237 --LISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQ 306 (320)
Q Consensus 237 --~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 306 (320)
...+....+.++++|+++|+|++|.+++.+..+.+.+.++ ++++++++| ||++++++|+++++.|.+
T Consensus 217 ~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 217 PGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMT--QAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp TTHHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHST--TSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred ccchhHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCC--CCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 0000112335678999999999999999999999999998 899999999 999999999999988864
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-35 Score=230.60 Aligned_cols=240 Identities=18% Similarity=0.177 Sum_probs=157.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhC-CCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLG-VDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~-~~~~~lvGh 137 (320)
+++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++|+.+++++++ .++++|+||
T Consensus 8 ~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGh 86 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW-IWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGH 86 (264)
T ss_dssp -CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEE
T ss_pred CCCCeEEEECCCccccc-hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 47899999999999998 999999999765 999999999999997643 34789999999999999996 589999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccc--c--ccccc----c----Cc-CcHHHHHHHHhHhh
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV--S--SSSEL----L----LP-NSVKGLKALLSVAT 204 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--~--~~~~~----~----~~-~~~~~~~~~~~~~~ 204 (320)
||||.+++.+|.++|++|+++|++++.................. . ..... . .. ..............
T Consensus 87 SmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 2wfl_A 87 SFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKM 166 (264)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHHT
T ss_pred ChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHHH
Confidence 99999999999999999999999997532111110000000000 0 00000 0 00 00000001111010
Q ss_pred hccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEE
Q 020916 205 YKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQG 284 (320)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
+.. .+.. ................ ..+............++|+++|+|++|.++|.+..+.+.+.++ +.++++
T Consensus 167 ~~~--~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p--~~~~~~ 238 (264)
T 2wfl_A 167 FQN--CSVE-DLELAKMLTRPGSLFF---QDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVG--ADKVKE 238 (264)
T ss_dssp STT--SCHH-HHHHHHHHCCCEECCH---HHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHC--CSEEEE
T ss_pred hcC--CCHH-HHHHHHhccCCCcccc---cccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCC--CceEEE
Confidence 000 0111 0111111111000000 0000000000011146899999999999999999999999998 899999
Q ss_pred ecCCCcccccCChHHHHHHHHHHHH
Q 020916 285 IKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 285 ~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
++++||++++|+|+++++.|.+|++
T Consensus 239 i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 239 IKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp ETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred eCCCCCchhhcCHHHHHHHHHHHhh
Confidence 9999999999999999999999975
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=237.25 Aligned_cols=256 Identities=18% Similarity=0.233 Sum_probs=176.0
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLF 100 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G 100 (320)
.+..++++ +|.+++|+..++ +++|+|||+||++++.. .|..+++.|++.|+|+++|+||
T Consensus 45 ~~~~~v~~-~~~~~~~~~~g~-------------------~~~~~vv~lHG~~~~~~-~~~~~~~~L~~g~~vi~~D~~G 103 (306)
T 2r11_A 45 CKSFYIST-RFGQTHVIASGP-------------------EDAPPLVLLHGALFSST-MWYPNIADWSSKYRTYAVDIIG 103 (306)
T ss_dssp CEEEEECC-TTEEEEEEEESC-------------------TTSCEEEEECCTTTCGG-GGTTTHHHHHHHSEEEEECCTT
T ss_pred cceEEEec-CCceEEEEeeCC-------------------CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEecCCC
Confidence 45566777 577899988764 36899999999999999 9999999998889999999999
Q ss_pred C-CCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccc
Q 020916 101 F-GGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179 (320)
Q Consensus 101 ~-G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 179 (320)
| |.|..+...++.+++++++.++++.++.++++|+|||+||.+|+.+|.++|++|+++|++++......... ......
T Consensus 104 ~gG~s~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~ 182 (306)
T 2r11_A 104 DKNKSIPENVSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHH-DFYKYA 182 (306)
T ss_dssp SSSSCEECSCCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCH-HHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccH-HHHHHH
Confidence 9 88887667789999999999999999999999999999999999999999999999999998765422111 000000
Q ss_pred cccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH--HHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEe
Q 020916 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD--FLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (320)
.. ..... ....+................. ...... .....................+.++++|+|+|+
T Consensus 183 -~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 253 (306)
T 2r11_A 183 -LG----LTASN----GVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLL 253 (306)
T ss_dssp -HT----TTSTT----HHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEE
T ss_pred -hH----HHHHH----HHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEE
Confidence 00 00000 1111111111111111111100 000000 000000000000000011123456889999999
Q ss_pred cCCCCCCCHHHHHHHHH-HhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 257 GEDDQIFNVELAHNMKE-QLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
|++|.+++.+....+.+ .++ ++++++++++||+++.++|+++++.|.+||+
T Consensus 254 G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 254 GEHEVIYDPHSALHRASSFVP--DIEAEVIKNAGHVLSMEQPTYVNERVMRFFN 305 (306)
T ss_dssp ETTCCSSCHHHHHHHHHHHST--TCEEEEETTCCTTHHHHSHHHHHHHHHHHHC
T ss_pred eCCCcccCHHHHHHHHHHHCC--CCEEEEeCCCCCCCcccCHHHHHHHHHHHHh
Confidence 99999999988875554 566 8999999999999999999999999999985
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=231.09 Aligned_cols=243 Identities=19% Similarity=0.111 Sum_probs=160.2
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhC-CCcEEEEEeC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLG-VDKCVLVGFS 138 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS 138 (320)
.+++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+. ..++++++++|+.++++.++ .++++|+|||
T Consensus 3 ~~~~vvllHG~~~~~~-~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 81 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHS 81 (273)
T ss_dssp CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEET
T ss_pred CCCeEEEECCCCCCcc-hHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhccCCCEEEEecC
Confidence 5689999999999998 999999999865 999999999999997643 34799999999999999997 5899999999
Q ss_pred hhHHHHHHHHHhCccccccEEEecccccccccccccccccccc--c--ccccc----c----Cc-CcHHHHHHHHhHhhh
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV--S--SSSEL----L----LP-NSVKGLKALLSVATY 205 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--~--~~~~~----~----~~-~~~~~~~~~~~~~~~ 205 (320)
|||.+++.+|.++|++|+++|++++.................. . ..... . .. ..............+
T Consensus 82 mGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T 1xkl_A 82 LGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLY 161 (273)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTS
T ss_pred HHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHHHHhh
Confidence 9999999999999999999999997532211110000000000 0 00000 0 00 000000011111100
Q ss_pred ccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEe
Q 020916 206 KKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGI 285 (320)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (320)
.. .+.. ................. .+............++|+++|+|++|.++|++..+.+.+.++ +.+++++
T Consensus 162 ~~--~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p--~~~~~~i 233 (273)
T 1xkl_A 162 QL--CSPE-DLALASSLVRPSSLFME---DLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG--VTEAIEI 233 (273)
T ss_dssp TT--SCHH-HHHHHHHHCCCBCCCHH---HHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHC--CSEEEEE
T ss_pred cc--CCHH-HHHHHHHhcCCCchhhh---hhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCC--CCeEEEe
Confidence 00 0111 01111111111000000 000000000111247899999999999999999999999998 8999999
Q ss_pred cCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 286 KKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 286 ~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+++||++++|+|+++++.|.+|+++...
T Consensus 234 ~~aGH~~~~e~P~~~~~~i~~fl~~~~~ 261 (273)
T 1xkl_A 234 KGADHMAMLCEPQKLCASLLEIAHKYNM 261 (273)
T ss_dssp TTCCSCHHHHSHHHHHHHHHHHHHHCC-
T ss_pred CCCCCCchhcCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999987653
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=236.58 Aligned_cols=246 Identities=14% Similarity=0.200 Sum_probs=174.3
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCC---C-CChhHHHHHHHHHHHHhCCCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEA---D-RSPTFQAQCLATGLAKLGVDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~---~-~~~~~~~~~l~~~l~~~~~~~~~lvGh 137 (320)
.+|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|..+.. . .+.+++++++.+++++++.++++|+||
T Consensus 27 ~~~~vv~lHG~~~~~~-~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~ 105 (282)
T 3qvm_A 27 GEKTVLLAHGFGCDQN-MWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGH 105 (282)
T ss_dssp SSCEEEEECCTTCCGG-GGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCeEEEECCCCCCcc-hHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 4489999999999999 9999999999889999999999999987652 2 488999999999999999999999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEeccccccccccccccccccc---ccccccccCcCcHHHHHHHHhHhhhccccCCchh
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG---VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL 214 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
|+||.+++.+|.++|++|+++|++++.......... ...... ........ ......+...+...... .......
T Consensus 106 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 182 (282)
T 3qvm_A 106 SVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPD-YVGGFERDDLEELINLM-DKNYIGWANYLAPLVMG-ASHSSEL 182 (282)
T ss_dssp THHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTT-EECSBCHHHHHHHHHHH-HHCHHHHHHHHHHHHHC-TTSCHHH
T ss_pred cccHHHHHHHHHhCchhhheEEEecCcchhccCchh-hhchhccccHHHHHHHH-hcchhhHHHHHHhhccC-Cccchhh
Confidence 999999999999999999999999987644322110 000000 00000000 00000111111111111 1112222
Q ss_pred HHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 215 YKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
...+..... ........+.......+....+.++++|+++|+|++|.++|.+..+.+.+.++ +.++++++++||+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~ 260 (282)
T 3qvm_A 183 IGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIP--NSQLELIQAEGHCLH 260 (282)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSS--SEEEEEEEEESSCHH
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCC--CCcEEEecCCCCccc
Confidence 333333222 12222233333333344445677889999999999999999999999999998 899999999999999
Q ss_pred cCChHHHHHHHHHHHHhhhh
Q 020916 294 LERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 294 ~~~~~~~~~~i~~fl~~~~~ 313 (320)
.++|+++++.|.+||++...
T Consensus 261 ~~~~~~~~~~i~~fl~~~~~ 280 (282)
T 3qvm_A 261 MTDAGLITPLLIHFIQNNQT 280 (282)
T ss_dssp HHCHHHHHHHHHHHHHHC--
T ss_pred ccCHHHHHHHHHHHHHhcCC
Confidence 99999999999999987643
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=229.38 Aligned_cols=241 Identities=18% Similarity=0.117 Sum_probs=159.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhC-CCcEEEEEeC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLG-VDKCVLVGFS 138 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS 138 (320)
++++|||+||++.+.. .|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++|+.+++++++ .++++|+|||
T Consensus 2 ~~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 80 (257)
T 3c6x_A 2 AFAHFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGES 80 (257)
T ss_dssp CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCTTCCEEEEEEE
T ss_pred CCCcEEEEcCCccCcC-CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccccCCeEEEEEC
Confidence 3678999999999998 999999999876 999999999999997643 35799999999999999995 5799999999
Q ss_pred hhHHHHHHHHHhCccccccEEEeccccccccccccccccccc--ccccccccC--------c-CcHHHHHHHHhHhhhcc
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG--VSSSSELLL--------P-NSVKGLKALLSVATYKK 207 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~ 207 (320)
|||.+++.+|.++|++|+++|++++................. ......... . ..............+..
T Consensus 81 mGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (257)
T 3c6x_A 81 CGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTL 160 (257)
T ss_dssp THHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTT
T ss_pred cchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHHHHHhcC
Confidence 999999999999999999999999853211110000000000 000000000 0 00000001111111100
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK 287 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (320)
.+... .................+.. ..........++|+|+|+|++|.++|++..+.+.+.++ +.+++++++
T Consensus 161 --~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~--~~~~~~i~~ 232 (257)
T 3c6x_A 161 --CGPEE-YELAKMLTRKGSLFQNILAK---RPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK--PDKVYKVEG 232 (257)
T ss_dssp --SCHHH-HHHHHHHCCCBCCCHHHHHH---SCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC--CSEEEECCS
T ss_pred --CCHHH-HHHHHHhcCCCccchhhhcc---ccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCC--CCeEEEeCC
Confidence 01110 11111111100000000000 00000111136899999999999999999999999998 899999999
Q ss_pred CCcccccCChHHHHHHHHHHHHhh
Q 020916 288 AGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 288 ~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+||++++|+|+++++.|.+|+++.
T Consensus 233 ~gH~~~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 233 GDHKLQLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp CCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCCcccCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999753
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-35 Score=227.39 Aligned_cols=226 Identities=17% Similarity=0.197 Sum_probs=152.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHH---HHHHHhCCCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLA---TGLAKLGVDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~---~~l~~~~~~~~~lvGh 137 (320)
++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|......++.+.+++|+. ++++.++.++++|+||
T Consensus 15 ~~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~lvG~ 93 (247)
T 1tqh_A 15 GERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGL 93 (247)
T ss_dssp SSCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred CCcEEEEECCCCCChH-HHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 4678999999999999 999999999876 9999999999997754334467777766654 4667778889999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
||||.+|+.+|.++| |+++|+++++....... .... ........+... ..........
T Consensus 94 SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~--~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~ 151 (247)
T 1tqh_A 94 SLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEE--TMYE--------------GVLEYAREYKKR----EGKSEEQIEQ 151 (247)
T ss_dssp THHHHHHHHHHTTSC--CSCEEEESCCSSCCCHH--HHHH--------------HHHHHHHHHHHH----HTCCHHHHHH
T ss_pred CHHHHHHHHHHHhCC--CCeEEEEcceeecCcch--hhhH--------------HHHHHHHHhhcc----cccchHHHHh
Confidence 999999999999998 99999877644211000 0000 000000000000 0011111111
Q ss_pred HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC-
Q 020916 218 FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER- 296 (320)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~- 296 (320)
...............+..+. .+....+.++++|+|+|+|++|.++|++..+.+.+.++..++++++++++||+++.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~ 230 (247)
T 1tqh_A 152 EMEKFKQTPMKTLKALQELI-ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQE 230 (247)
T ss_dssp HHHHHTTSCCTTHHHHHHHH-HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGSTT
T ss_pred hhhcccCCCHHHHHHHHHHH-HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceeeccCcc
Confidence 11111100000000000000 0112356778999999999999999999999999999833479999999999999875
Q ss_pred hHHHHHHHHHHHHhh
Q 020916 297 PCAYNRCLKQFLASL 311 (320)
Q Consensus 297 ~~~~~~~i~~fl~~~ 311 (320)
|+++++.|.+||++.
T Consensus 231 ~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 231 KDQLHEDIYAFLESL 245 (247)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 799999999999864
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=234.32 Aligned_cols=245 Identities=21% Similarity=0.239 Sum_probs=165.3
Q ss_pred CCCeEEEEcCCCCCccccHH-HHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQ-FQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~-~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
++|+|||+||++++.. .|. .+++.|.+. |+|+++|+||||.|..+ ..++.+++++++.+++++++.++++|+|||+
T Consensus 42 ~~~~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~-~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~ 119 (293)
T 3hss_A 42 TGDPVVFIAGRGGAGR-TWHPHQVPAFLAAGYRCITFDNRGIGATENA-EGFTTQTMVADTAALIETLDIAPARVVGVSM 119 (293)
T ss_dssp SSEEEEEECCTTCCGG-GGTTTTHHHHHHTTEEEEEECCTTSGGGTTC-CSCCHHHHHHHHHHHHHHHTCCSEEEEEETH
T ss_pred CCCEEEEECCCCCchh-hcchhhhhhHhhcCCeEEEEccCCCCCCCCc-ccCCHHHHHHHHHHHHHhcCCCcEEEEeeCc
Confidence 5789999999999999 998 678877555 99999999999998754 4579999999999999999999999999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHH
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL 219 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
||.+++.+|.++|++|+++|++++.................... ................... .............+.
T Consensus 120 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 197 (293)
T 3hss_A 120 GAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYD-SGVQLPPTYDARARLLENF-SRKTLNDDVAVGDWI 197 (293)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHH-HTCCCCHHHHHHHHHHHHS-CHHHHTCHHHHHHHH
T ss_pred cHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHh-hcccchhhHHHHHHHhhhc-ccccccccccHHHHH
Confidence 99999999999999999999999876432211000000000000 0000000000001100000 000000111111111
Q ss_pred HHHhc----ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC
Q 020916 220 EVMFA----NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE 295 (320)
Q Consensus 220 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 295 (320)
..... ...............+....+.++++|+++|+|++|.++|++..+.+.+.++ ++++++++++||+++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~ 275 (293)
T 3hss_A 198 AMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALP--NGRYLQIPDAGHLGFFE 275 (293)
T ss_dssp HHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST--TEEEEEETTCCTTHHHH
T ss_pred HHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCC--CceEEEeCCCcchHhhh
Confidence 11110 0011111111111112223457789999999999999999999999999998 89999999999999999
Q ss_pred ChHHHHHHHHHHHHhhh
Q 020916 296 RPCAYNRCLKQFLASLH 312 (320)
Q Consensus 296 ~~~~~~~~i~~fl~~~~ 312 (320)
+|+++++.|.+||+++.
T Consensus 276 ~p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 276 RPEAVNTAMLKFFASVK 292 (293)
T ss_dssp SHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHhcC
Confidence 99999999999998753
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=228.00 Aligned_cols=238 Identities=14% Similarity=0.189 Sum_probs=169.0
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCC--ccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAE--GIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~--~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
++.. ||.+|+++...+... .+++|+|||+||++++ .. .|..+++.|.+. |+|+++|+|||
T Consensus 5 ~~~~-~g~~l~~~~~~p~~~---------------~~~~p~vvl~HG~~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~ 67 (251)
T 2wtm_A 5 YIDC-DGIKLNAYLDMPKNN---------------PEKCPLCIIIHGFTGHSEER-HIVAVQETLNEIGVATLRADMYGH 67 (251)
T ss_dssp EEEE-TTEEEEEEEECCTTC---------------CSSEEEEEEECCTTCCTTSH-HHHHHHHHHHHTTCEEEEECCTTS
T ss_pred EEec-CCcEEEEEEEccCCC---------------CCCCCEEEEEcCCCcccccc-cHHHHHHHHHHCCCEEEEecCCCC
Confidence 3444 799999977665210 1256889999999999 77 899999999887 99999999999
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHhC----CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc
Q 020916 102 GGSITDEADRSPTFQAQCLATGLAKLG----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177 (320)
Q Consensus 102 G~s~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 177 (320)
|.|......++...+++|+.++++.+. .++++|+||||||.+++.+|.++|++|+++|++++..............
T Consensus 68 G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 147 (251)
T 2wtm_A 68 GKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELL 147 (251)
T ss_dssp TTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEET
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhc
Confidence 999875556788889999999999884 4689999999999999999999999999999998764321110000000
Q ss_pred cccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
.. .......+.... .+........+..... ..+....+.++++|+|+|+|
T Consensus 148 ~~---~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~--------------~~~~~~~~~~i~~P~lii~G 197 (251)
T 2wtm_A 148 GL---KFDPENIPDELD-------------AWDGRKLKGNYVRVAQ--------------TIRVEDFVDKYTKPVLIVHG 197 (251)
T ss_dssp TE---ECBTTBCCSEEE-------------ETTTEEEETHHHHHHT--------------TCCHHHHHHHCCSCEEEEEE
T ss_pred cc---cCCchhcchHHh-------------hhhccccchHHHHHHH--------------ccCHHHHHHhcCCCEEEEEe
Confidence 00 000000000000 0000000001111110 00001123457899999999
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 258 EDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
++|.++|++..+.+.+.++ ++++++++++||++ .++|+++++.|.+||++..
T Consensus 198 ~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~ 249 (251)
T 2wtm_A 198 DQDEAVPYEASVAFSKQYK--NCKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQI 249 (251)
T ss_dssp TTCSSSCHHHHHHHHHHSS--SEEEEEETTCCTTC-TTTHHHHHHHHHHHHHHHH
T ss_pred CCCCCcChHHHHHHHHhCC--CcEEEEECCCCccc-chhHHHHHHHHHHHHHHhc
Confidence 9999999999999999998 89999999999999 9999999999999998653
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=226.61 Aligned_cols=241 Identities=17% Similarity=0.179 Sum_probs=165.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCC-CcEEEEEeC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGV-DKCVLVGFS 138 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS 138 (320)
.+|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+.. .++.+++++++.+++++++. ++++|+|||
T Consensus 3 ~g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS 81 (258)
T 3dqz_A 3 RKHHFVLVHNAYHGAW-IWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVILVGFS 81 (258)
T ss_dssp CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCTTCCEEEEEET
T ss_pred CCCcEEEECCCCCccc-cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcccCceEEEEeC
Confidence 4589999999999999 999999999998 9999999999999987643 48999999999999999987 899999999
Q ss_pred hhHHHHHHHHHhCccccccEEEecccccccccccccccccccc--cccccccCc--------C-cHHHHHHHHhHhhhcc
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV--SSSSELLLP--------N-SVKGLKALLSVATYKK 207 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--------~-~~~~~~~~~~~~~~~~ 207 (320)
+||.+++.+|.++|++|+++|++++.................. ......... . ........+....+.
T Consensus 82 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (258)
T 3dqz_A 82 FGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQ- 160 (258)
T ss_dssp THHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHHTST-
T ss_pred hhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHHhhc-
Confidence 9999999999999999999999998654332221111110000 000000000 0 000000111111110
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK 287 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (320)
..+.... ............ +...+............++|+++|+|++|.++|++..+.+.+.++ +.+++++++
T Consensus 161 -~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~ 233 (258)
T 3dqz_A 161 -NCPIEDY-ELAKMLHRQGSF---FTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFN--VSKVYEIDG 233 (258)
T ss_dssp -TSCHHHH-HHHHHHCCCEEC---CHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSC--CSCEEEETT
T ss_pred -cCCHHHH-HHHHHhccCCch---hhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCC--cccEEEcCC
Confidence 0111111 111111111111 111111112222333347999999999999999999999999998 889999999
Q ss_pred CCcccccCChHHHHHHHHHHHHhh
Q 020916 288 AGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 288 ~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+||+++.++|+++++.|.+|+++.
T Consensus 234 ~gH~~~~~~p~~~~~~i~~fl~~~ 257 (258)
T 3dqz_A 234 GDHMVMLSKPQKLFDSLSAIATDY 257 (258)
T ss_dssp CCSCHHHHSHHHHHHHHHHHHHHT
T ss_pred CCCchhhcChHHHHHHHHHHHHHh
Confidence 999999999999999999999864
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=244.83 Aligned_cols=259 Identities=18% Similarity=0.165 Sum_probs=182.0
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCC
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITD 107 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~ 107 (320)
.||.+|+|...| ++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+
T Consensus 11 ~dG~~l~y~~~G---------------------~gp~VV~lHG~~~~~~-~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~ 68 (456)
T 3vdx_A 11 STSIDLYYEDHG---------------------TGVPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQP 68 (456)
T ss_dssp TEEEEEEEEEES---------------------SSEEEEEECCTTCCGG-GGTTHHHHHHHHTEEEEEECCTTSTTSCCC
T ss_pred cCCeEEEEEEeC---------------------CCCEEEEECCCCCcHH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCC
Confidence 378999998776 4689999999999999 999999999666 99999999999999988
Q ss_pred CCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccccccc---ccccc
Q 020916 108 EADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINETNLNR---LGVSS 183 (320)
Q Consensus 108 ~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~---~~~~~ 183 (320)
...++++++++|+.++++.++.++++|+|||+||.+++.+|..+ |++|+++|++++............... .....
T Consensus 69 ~~~~s~~~~a~dl~~~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (456)
T 3vdx_A 69 TTGYDYDTFAADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDG 148 (456)
T ss_dssp SSCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHH
Confidence 78889999999999999999999999999999999999988887 899999999998764322211100000 00000
Q ss_pred cccccCcCcHHHHHHHHhHhhhcc----ccCCchhHHHHHHHHhcC-hhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC
Q 020916 184 SSELLLPNSVKGLKALLSVATYKK----LWFPSCLYKDFLEVMFAN-RKERAELLEGLLISNKDPTVPNFPQRVHLLWGE 258 (320)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 258 (320)
...............++....... ..........+....... ..........+ ..+....+..+++|+|+|+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~l~~i~~PvLiI~G~ 227 (456)
T 3vdx_A 149 IVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-YTDFRADIPRIDVPALILHGT 227 (456)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGT-TCCCTTTSTTCCSCCEEEEET
T ss_pred HHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhh-hhhHHHHhhhCCCCEEEEEeC
Confidence 000000011111111111111111 112222223322222211 11111112221 234446788899999999999
Q ss_pred CCCCCCHH-HHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 259 DDQIFNVE-LAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 259 ~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
+|.++|.+ ..+.+.+.++ ++++++++++||+++.++|+++.+.|.+||++..
T Consensus 228 ~D~~vp~~~~~~~l~~~~~--~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~l 280 (456)
T 3vdx_A 228 GDRTLPIENTARVFHKALP--SAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKAL 280 (456)
T ss_dssp TCSSSCGGGTHHHHHHHCT--TSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHCC--CceEEEeCCCCCcchhhCHHHHHHHHHHHHHHhh
Confidence 99999988 6777888777 8999999999999999999999999999998754
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=236.41 Aligned_cols=269 Identities=19% Similarity=0.176 Sum_probs=180.0
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
+.+++.+ ||.+++|+..|++ .+++|+|||+||++++.. .|..+++.|.+. |+|+++|+||
T Consensus 4 ~~~~~~~-~g~~l~y~~~G~~-----------------~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~g 64 (356)
T 2e3j_A 4 VHRILNC-RGTRIHAVADSPP-----------------DQQGPLVVLLHGFPESWY-SWRHQIPALAGAGYRVVAIDQRG 64 (356)
T ss_dssp CEEEEEE-TTEEEEEEEECCT-----------------TCCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTT
T ss_pred eEEEEcc-CCeEEEEEEecCC-----------------CCCCCEEEEECCCCCcHH-HHHHHHHHHHHcCCEEEEEcCCC
Confidence 4556776 7999999988852 126789999999999999 999999999876 9999999999
Q ss_pred CCCCCCCCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc----------cc
Q 020916 101 FGGSITDEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA----------MT 168 (320)
Q Consensus 101 ~G~s~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~----------~~ 168 (320)
||.|..+.. .++...+++++.++++.++.++++++|||+||.+++.+|.++|++|+++|+++++.. ..
T Consensus 65 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 144 (356)
T 2e3j_A 65 YGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPF 144 (356)
T ss_dssp STTSCCCCSGGGGSHHHHHHHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSS
T ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCc
Confidence 999987653 478899999999999999999999999999999999999999999999999997651 10
Q ss_pred ccc-cccccccc------------ccccccc-ccCcCcHHHHHHHHhHhhh-----------------------------
Q 020916 169 DSI-NETNLNRL------------GVSSSSE-LLLPNSVKGLKALLSVATY----------------------------- 205 (320)
Q Consensus 169 ~~~-~~~~~~~~------------~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------------------- 205 (320)
... ........ ....... .+.......+..++.....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (356)
T 2e3j_A 145 GERRPSDYHLELAGPGRVWYQDYFAVQDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAG 224 (356)
T ss_dssp CCSCHHHHHHSSSCSSEEEHHHHHHHCSHHHHHHHTTHHHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTS
T ss_pred ccccchHHHHHhhcCCcHHHHHHHhcccchHHHHHHhHHHHHHHHhhccccchhhccchhhccccccccccccccccccc
Confidence 000 00000000 0000000 0000000111111111000
Q ss_pred -------------------ccccCCchhHHHHHHHHhc-ChhhHHHHhhhhhc---cCCCCCCCCCCCcEEEEecCCCCC
Q 020916 206 -------------------KKLWFPSCLYKDFLEVMFA-NRKERAELLEGLLI---SNKDPTVPNFPQRVHLLWGEDDQI 262 (320)
Q Consensus 206 -------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~ 262 (320)
...+........+...+.. .......++..+.. ......+..+++|+|+|+|++|.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~ 304 (356)
T 2e3j_A 225 PLCMAEGARLKDAFVYPETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVG 304 (356)
T ss_dssp TTEEETTSCGGGGCCCCSSCCTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHH
T ss_pred ccccccchhhhhcccccccccccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCcc
Confidence 0001112222222222110 00001111111100 001113578999999999999999
Q ss_pred CCH--HHHHHHHHHhCCCCe-EEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 263 FNV--ELAHNMKEQLGADHV-TFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 263 ~~~--~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+|. +..+.+.+.++ +. ++++++|+||+++.|+|+++++.|.+||+++
T Consensus 305 ~p~~~~~~~~l~~~~p--~~~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 305 TIWGAQAIERAHEVMP--NYRGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp HHHTHHHHHTHHHHCT--TEEEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred ccccHHHHHHHHHhCc--CcceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 984 88889999998 88 9999999999999999999999999999865
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-35 Score=231.91 Aligned_cols=243 Identities=16% Similarity=0.118 Sum_probs=165.3
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCC-CChhHHHHHHHHHHHHhC-CCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEAD-RSPTFQAQCLATGLAKLG-VDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~lvGh 137 (320)
.++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..+... ++.+++++++.+++++++ .++++|+||
T Consensus 10 ~~~~~vvllHG~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGh 88 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW-CWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPANEKIILVGH 88 (267)
T ss_dssp CCCCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCTTSCEEEEEE
T ss_pred CCCCeEEEECCCCCCcc-hHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 47899999999999999 999999999987 99999999999999877543 899999999999999994 889999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccc--ccccc-----c---ccc-CcCcHHHHHHHHhHhhhc
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL--GVSSS-----S---ELL-LPNSVKGLKALLSVATYK 206 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~-----~---~~~-~~~~~~~~~~~~~~~~~~ 206 (320)
|+||.+++.+|.++|++|+++|++++................ ..... . ... ...........+......
T Consensus 89 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (267)
T 3sty_A 89 ALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYH 168 (267)
T ss_dssp TTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHHTST
T ss_pred cHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHhhcc
Confidence 999999999999999999999999987644332211111110 00000 0 000 000000000111111100
Q ss_pred cccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEec
Q 020916 207 KLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIK 286 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
..+.... ............. .+..+............++|+++|+|++|.+++++..+.+.+.++ ++++++++
T Consensus 169 --~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~ 241 (267)
T 3sty_A 169 --LSPIEDL-ALATALVRPLYLY--LAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNP--PDEVKEIE 241 (267)
T ss_dssp --TSCHHHH-HHHHHHCCCEECC--CHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSC--CSEEEECT
T ss_pred --cCCHHHH-HHHHHhhccchhH--HHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCC--CceEEEeC
Confidence 0111111 1111111110000 000011111111222236999999999999999999999999998 89999999
Q ss_pred CCCcccccCChHHHHHHHHHHHHhh
Q 020916 287 KAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 287 ~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++||+++.++|+++++.|.+|+++.
T Consensus 242 ~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 242 GSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp TCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCccccccChHHHHHHHHHHHHhc
Confidence 9999999999999999999999864
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=229.18 Aligned_cols=257 Identities=15% Similarity=0.103 Sum_probs=171.3
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcccc-HHH-----HHHHhhccceEEe
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVT-WQF-----QVGALTKKYSVYI 95 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~-~~~-----~~~~l~~~~~vi~ 95 (320)
..+++.+ +|.+++|...|++ ++++|+|||+||++++.. . |.. +++.|++.|+|++
T Consensus 12 ~~~~~~~-~~~~l~y~~~G~~-----------------~~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~L~~~~~vi~ 72 (286)
T 2qmq_A 12 HTHSVET-PYGSVTFTVYGTP-----------------KPKRPAIFTYHDVGLNYK-SCFQPLFRFGDMQEIIQNFVRVH 72 (286)
T ss_dssp EEEEEEE-TTEEEEEEEESCC-----------------CTTCCEEEEECCTTCCHH-HHHHHHHTSHHHHHHHTTSCEEE
T ss_pred ccccccc-CCeEEEEEeccCC-----------------CCCCCeEEEeCCCCCCch-hhhhhhhhhchhHHHhcCCCEEE
Confidence 4566777 7999999988851 126899999999999887 4 665 7888988899999
Q ss_pred cCCCCCCCCCCCC-CC---CChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 96 PDLLFFGGSITDE-AD---RSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 96 ~d~~G~G~s~~~~-~~---~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
+|+||||.|.... .. ++.+++++++.+++++++.++++|+|||+||.+++.+|.++|++|+++|++++........
T Consensus 73 ~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 152 (286)
T 2qmq_A 73 VDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM 152 (286)
T ss_dssp EECTTTSTTCCCCCTTCCCCCHHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH
T ss_pred ecCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh
Confidence 9999999876542 22 4899999999999999999999999999999999999999999999999999865322110
Q ss_pred cccccccccccccccccCcCcHHHHH-HHHhHhhhccccCCchhHHHHHHHHhcC--hhhHHHHhhhhhcc-CC---CCC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLK-ALLSVATYKKLWFPSCLYKDFLEVMFAN--RKERAELLEGLLIS-NK---DPT 244 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~---~~~ 244 (320)
. ...... ............ ..+..... .......+.+....... ......+...+... .. ...
T Consensus 153 ~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T 2qmq_A 153 D--WAAHKL-----TGLTSSIPDMILGHLFSQEEL---SGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGG 222 (286)
T ss_dssp H--HHHHHH-----HHTTSCHHHHHHHHHSCHHHH---HTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETT
T ss_pred h--hhhhhh-----ccccccchHHHHHHHhcCCCC---CcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhch
Confidence 0 000000 000000000000 11100000 00112222222222111 11111122111111 11 145
Q ss_pred CCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 245 VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 245 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
+..+++|+|+|+|++|.++| ...+.+.+..+ .++++++++++||+++.++|+++++.|.+||+
T Consensus 223 l~~i~~P~lii~G~~D~~~~-~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 223 ETTLKCPVMLVVGDQAPHED-AVVECNSKLDP-TQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp EECCCSCEEEEEETTSTTHH-HHHHHHHHSCG-GGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred hccCCCCEEEEecCCCcccc-HHHHHHHHhcC-CCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 67889999999999999987 44445554443 37999999999999999999999999999985
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-35 Score=238.08 Aligned_cols=259 Identities=17% Similarity=0.188 Sum_probs=172.8
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGG 103 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~ 103 (320)
....+ ++.+++|...++ .+|+|||+||++++.. .|..+++.| .|+|+++|+||||.
T Consensus 63 ~~~~~-~~~~~~~~~~g~--------------------~~~~vv~~hG~~~~~~-~~~~~~~~l--g~~Vi~~D~~G~G~ 118 (330)
T 3p2m_A 63 EVERV-QAGAISALRWGG--------------------SAPRVIFLHGGGQNAH-TWDTVIVGL--GEPALAVDLPGHGH 118 (330)
T ss_dssp CEEEE-EETTEEEEEESS--------------------SCCSEEEECCTTCCGG-GGHHHHHHS--CCCEEEECCTTSTT
T ss_pred Cceee-cCceEEEEEeCC--------------------CCCeEEEECCCCCccc-hHHHHHHHc--CCeEEEEcCCCCCC
Confidence 44455 577888888775 5789999999999999 999999888 69999999999999
Q ss_pred CCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccccc
Q 020916 104 SITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVS 182 (320)
Q Consensus 104 s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
|.... ..++.+++++|+.+++++++.++++|+|||+||.+|+.+|.++|++|+++|++++.+.................
T Consensus 119 S~~~~~~~~~~~~~a~dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 198 (330)
T 3p2m_A 119 SAWREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTV 198 (330)
T ss_dssp SCCCSSCBCCHHHHHHHHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhh
Confidence 98544 56899999999999999999999999999999999999999999999999999976532211100000000000
Q ss_pred ccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh-cChhhHHH-HhhhhhccC----CCCCCCCCCCcEEEEe
Q 020916 183 SSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF-ANRKERAE-LLEGLLISN----KDPTVPNFPQRVHLLW 256 (320)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~----~~~~~~~~~~P~l~i~ 256 (320)
... ........+........................... ........ ....+.... ....+.++++|+|+|+
T Consensus 199 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~ 276 (330)
T 3p2m_A 199 ALM--HGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVR 276 (330)
T ss_dssp --------CCBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEE
T ss_pred hhh--cCCccccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEE
Confidence 000 000000111111111111111111111111111000 00000000 000000000 0012456799999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeE-EEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVT-FQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
|++|.+++.+..+.+.+.++ +.+ +++++++||+++.++|+++++.|.+||++
T Consensus 277 G~~D~~v~~~~~~~l~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 277 GGSSGFVTDQDTAELHRRAT--HFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp ETTCCSSCHHHHHHHHHHCS--SEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred eCCCCCCCHHHHHHHHHhCC--CCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 99999999999999999998 888 99999999999999999999999999864
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=250.38 Aligned_cols=272 Identities=18% Similarity=0.260 Sum_probs=190.2
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d 97 (320)
..++..++++.||.+++|...| ++|+|||+||++++.. .|..+++.|.+. |+|+++|
T Consensus 235 ~~~~~~~~~~~dg~~l~~~~~g---------------------~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~D 292 (555)
T 3i28_A 235 SDMSHGYVTVKPRVRLHFVELG---------------------SGPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMD 292 (555)
T ss_dssp GGSEEEEEEEETTEEEEEEEEC---------------------SSSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEEC
T ss_pred cccceeEEEeCCCcEEEEEEcC---------------------CCCEEEEEeCCCCchh-HHHHHHHHHHhCCCEEEEec
Confidence 3566788888889999998877 4789999999999999 999999999997 9999999
Q ss_pred CCCCCCCCCCCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc
Q 020916 98 LLFFGGSITDEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175 (320)
Q Consensus 98 ~~G~G~s~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 175 (320)
+||||.|..+.. .++.+++++|+.+++++++.++++++|||+||.+|+.+|.++|++|+++|+++++...........
T Consensus 293 ~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 372 (555)
T 3i28_A 293 MKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPL 372 (555)
T ss_dssp CTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHH
T ss_pred CCCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchH
Confidence 999999987663 578899999999999999999999999999999999999999999999999988764332211100
Q ss_pred cccccccccc--cc-cCcC-----cHHHHHHHHhHhhhcc---------------------------ccCCchhHHHHHH
Q 020916 176 LNRLGVSSSS--EL-LLPN-----SVKGLKALLSVATYKK---------------------------LWFPSCLYKDFLE 220 (320)
Q Consensus 176 ~~~~~~~~~~--~~-~~~~-----~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~ 220 (320)
.......... .. ..+. ....+...+....... ..........+..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (555)
T 3i28_A 373 ESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQ 452 (555)
T ss_dssp HHHHTCGGGHHHHHHHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHH
T ss_pred HHHhcCCccchhHHhhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHH
Confidence 0000000000 00 0000 0000111111110000 0112222233333
Q ss_pred HHhcCh-hhHHHHhhhh---hccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 221 VMFANR-KERAELLEGL---LISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 221 ~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.+.... .....++..+ ...+....+.++++|+|+|+|++|.++|++..+.+.+.++ ++++++++++||+++.++
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~ 530 (555)
T 3i28_A 453 QFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP--HLKRGHIEDCGHWTQMDK 530 (555)
T ss_dssp HHTTTTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT--TCEEEEETTCCSCHHHHS
T ss_pred HHhcccchhHHHHHHhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC--CceEEEeCCCCCCcchhC
Confidence 322111 1111111111 0112234567899999999999999999999999999888 899999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhc
Q 020916 297 PCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 297 ~~~~~~~i~~fl~~~~~~ 314 (320)
|+++++.|.+||++....
T Consensus 531 p~~~~~~i~~fl~~~~~~ 548 (555)
T 3i28_A 531 PTEVNQILIKWLDSDARN 548 (555)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhccCC
Confidence 999999999999987653
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=247.81 Aligned_cols=269 Identities=18% Similarity=0.187 Sum_probs=179.7
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDL 98 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~ 98 (320)
.+++.+++++ +|.+++|...| ++|+|||+||++++.. .|..+++.|.+.|+|+++|+
T Consensus 3 ~~~~~~~~~~-~g~~~~~~~~g---------------------~~p~vv~lHG~~~~~~-~~~~~~~~l~~g~~v~~~D~ 59 (304)
T 3b12_A 3 EGFERRLVDV-GDVTINCVVGG---------------------SGPALLLLHGFPQNLH-MWARVAPLLANEYTVVCADL 59 (304)
Confidence 3567788888 79999998766 4688999999999999 99999999996699999999
Q ss_pred CCCCCCCCC-----CCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 99 LFFGGSITD-----EADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 99 ~G~G~s~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
||||.|..+ ...++.+++++|+.++++.++.++++|+|||+||.+++.+|.++|++|+++|++++..........
T Consensus 60 ~G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 139 (304)
T 3b12_A 60 RGYGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEV 139 (304)
Confidence 999999877 456788999999999999999899999999999999999999999999999999987643221110
Q ss_pred ccccccc-----ccc----cccccCcCcHH-HHHH-HHhHhhhccccCCchhHHHHHHHHhcC--hhhHHHHhhhhhccC
Q 020916 174 TNLNRLG-----VSS----SSELLLPNSVK-GLKA-LLSVATYKKLWFPSCLYKDFLEVMFAN--RKERAELLEGLLISN 240 (320)
Q Consensus 174 ~~~~~~~-----~~~----~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (320)
....... ... ........... .+.. ++..........+.+....+....... .......+......+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (304)
T 3b12_A 140 DRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTID 219 (304)
Confidence 0000000 000 00000000000 0011 111111111111222222222111100 001111111111111
Q ss_pred CC----CCCCCCCCcEEEEecCCCCCC-CHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 241 KD----PTVPNFPQRVHLLWGEDDQIF-NVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 241 ~~----~~~~~~~~P~l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.. ..+.++++|+|+|+|++|..+ +....+.+.+..+ +++++++ ++||+++.++|+++++.|.+||++...
T Consensus 220 ~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 220 FELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVWAPRLA--NMRFASL-PGGHFFVDRFPDDTARILREFLSDARS 294 (304)
Confidence 11 116789999999999999544 5666677777776 7888999 999999999999999999999998754
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-33 Score=222.84 Aligned_cols=254 Identities=15% Similarity=0.142 Sum_probs=171.7
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++...||.+|+|+..++. .+.+|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.
T Consensus 21 ~~~~~~g~~l~~~~~~~~-----------------~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~ 82 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPT-----------------GTPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQ 82 (303)
T ss_dssp EEECTTSCEEEEEEECCS-----------------SCCSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTT
T ss_pred eEecCCCeEEEEEEeccC-----------------CCCCeEEEEECCCCchhh-HHHHHHHHHHhCCCcEEEeCCCCCCC
Confidence 566668999999887752 135789999999999999 999999999986 9999999999999
Q ss_pred CCCCCC-CCChhHHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc--
Q 020916 104 SITDEA-DRSPTFQAQCLATGLAKLGV----DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL-- 176 (320)
Q Consensus 104 s~~~~~-~~~~~~~~~~l~~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-- 176 (320)
|..... ..+.+.+++|+.++++.+.. ++++++|||+||.+++.++.++|++|+++|++++.............
T Consensus 83 s~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 162 (303)
T 3pe6_A 83 SEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVL 162 (303)
T ss_dssp SCSSTTCCSSTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHH
Confidence 986553 36788889999999988753 48999999999999999999999999999999987644322110000
Q ss_pred ---------ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC
Q 020916 177 ---------NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN 247 (320)
Q Consensus 177 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (320)
............................................. ..... ..+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---------~~~~~ 226 (303)
T 3pe6_A 163 AAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNA-------VSRVE---------RALPK 226 (303)
T ss_dssp HHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHH-------HHHHH---------HHGGG
T ss_pred HHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHH-------HHHHH---------HHhhc
Confidence 000000000000111111111111000000000000000000000 00000 13456
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHH---HHHHHHhhh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRC---LKQFLASLH 312 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~---i~~fl~~~~ 312 (320)
+++|+++|+|++|.+++.+..+.+.+.++..++++++++++||+++.++|+++.+. +.+||++..
T Consensus 227 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 227 LTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp CCSCEEEEEETTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeeCCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 78999999999999999999999999987447899999999999999999866665 556665543
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=225.56 Aligned_cols=254 Identities=15% Similarity=0.156 Sum_probs=173.3
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
.+...||.+|+|+..++. .+.+|+|||+||++++.. .|..+++.|.+. |+|+++|+||+|.
T Consensus 39 ~~~~~dg~~l~~~~~~p~-----------------~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~ 100 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPT-----------------GTPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQ 100 (342)
T ss_dssp EEECTTSCEEEEEEECCS-----------------SCCSEEEEEECCTTCCGG-GGHHHHHHHHTTTEEEEEECCTTSTT
T ss_pred eEEccCCeEEEEEEeCCC-----------------CCCCcEEEEECCCCcccc-hHHHHHHHHHhCCCeEEEEcCCCCcC
Confidence 566668999999887652 236789999999999999 999999999996 9999999999999
Q ss_pred CCCCC-CCCChhHHHHHHHHHHHHhCC----CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc-
Q 020916 104 SITDE-ADRSPTFQAQCLATGLAKLGV----DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN- 177 (320)
Q Consensus 104 s~~~~-~~~~~~~~~~~l~~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~- 177 (320)
|..+. ...++..+++|+.++++.+.. ++++|+|||+||.+++.+|.++|++|+++|++++..............
T Consensus 101 S~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 180 (342)
T 3hju_A 101 SEGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVL 180 (342)
T ss_dssp SCSSTTCCSCTHHHHHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHH
T ss_pred CCCcCCCcCcHHHHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHH
Confidence 98755 447888889999999988753 389999999999999999999999999999999876543322111000
Q ss_pred ----------cccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC
Q 020916 178 ----------RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN 247 (320)
Q Consensus 178 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (320)
............................................ . ... ...+.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~---------~~~~~~ 244 (342)
T 3hju_A 181 AAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNA----V---SRV---------ERALPK 244 (342)
T ss_dssp HHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHH----H---HHH---------HHHGGG
T ss_pred HHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHH----H---HHH---------HHHHHh
Confidence 00000000000111111111110000000000000000000000 0 000 123567
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHH---HHHHHHhhh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRC---LKQFLASLH 312 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~---i~~fl~~~~ 312 (320)
+++|+|+|+|++|.+++.+..+.+.+.++..++++++++++||+++.++|+++.+. +.+||++..
T Consensus 245 i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 245 LTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEEeCCCcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 78999999999999999999999999987447899999999999999999765555 666766544
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=227.04 Aligned_cols=242 Identities=17% Similarity=0.165 Sum_probs=176.9
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCC--ccccHHHHHHHhhcc-ceEEe
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAE--GIVTWQFQVGALTKK-YSVYI 95 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~--~~~~~~~~~~~l~~~-~~vi~ 95 (320)
.+++..++.. +|.+|+|+..++. .+++|+|||+||++++ .. .|..+++.|.+. |.|++
T Consensus 20 ~~~~~~~~~~-~g~~l~~~~~~p~-----------------~~~~p~vv~~HG~~~~~~~~-~~~~~~~~l~~~G~~v~~ 80 (270)
T 3pfb_A 20 QGMATITLER-DGLQLVGTREEPF-----------------GEIYDMAIIFHGFTANRNTS-LLREIANSLRDENIASVR 80 (270)
T ss_dssp CEEEEEEEEE-TTEEEEEEEEECS-----------------SSSEEEEEEECCTTCCTTCH-HHHHHHHHHHHTTCEEEE
T ss_pred ccceEEEecc-CCEEEEEEEEcCC-----------------CCCCCEEEEEcCCCCCcccc-HHHHHHHHHHhCCcEEEE
Confidence 3556667776 7999999888752 1357899999999988 55 689999999888 99999
Q ss_pred cCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 96 PDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 96 ~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
+|+||||.|.......+...+++|+.++++.+ +.++++|+|||+||.+++.++.++|++|+++|++++........
T Consensus 81 ~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~ 160 (270)
T 3pfb_A 81 FDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDA 160 (270)
T ss_dssp ECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHH
T ss_pred EccccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhh
Confidence 99999999998777788999999999999988 66799999999999999999999999999999999876433211
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCc
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQR 251 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 251 (320)
.......... ......... ..........+..... .......+..+++|
T Consensus 161 ~~~~~~~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~P 209 (270)
T 3pfb_A 161 LEGNTQGVTY---NPDHIPDRL--------------PFKDLTLGGFYLRIAQ--------------QLPIYEVSAQFTKP 209 (270)
T ss_dssp HHTEETTEEC---CTTSCCSEE--------------EETTEEEEHHHHHHHH--------------HCCHHHHHTTCCSC
T ss_pred hhhhhhcccc---Ccccccccc--------------cccccccchhHhhccc--------------ccCHHHHHhhCCcc
Confidence 1110000000 000000000 0000000011111110 00111234577899
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 252 VHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 252 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
+++++|++|.+++.+..+.+.+.++ ++++++++++||+++.++++++.+.|.+||++..
T Consensus 210 ~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 268 (270)
T 3pfb_A 210 VCLIHGTDDTVVSPNASKKYDQIYQ--NSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNNN 268 (270)
T ss_dssp EEEEEETTCSSSCTHHHHHHHHHCS--SEEEEEETTCCTTCCTHHHHHHHHHHHHHHC---
T ss_pred EEEEEcCCCCCCCHHHHHHHHHhCC--CCeEEEcCCCCcccCccchHHHHHHHHHHHhhcC
Confidence 9999999999999999999999988 8999999999999999999999999999998754
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=226.47 Aligned_cols=263 Identities=16% Similarity=0.172 Sum_probs=163.6
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc-cceEEecCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK-KYSVYIPDL 98 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~-~~~vi~~d~ 98 (320)
+++.+++.+.||.+++|...|+ +++++|||+||++++.. .+ .+...+.. .|+|+++|+
T Consensus 13 ~~~~~~~~~~~g~~l~~~~~g~-------------------~~g~~vvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~ 71 (317)
T 1wm1_A 13 AYDSGWLDTGDGHRIYWELSGN-------------------PNGKPAVFIHGGPGGGI-SP-HHRQLFDPERYKVLLFDQ 71 (317)
T ss_dssp CSEEEEEECSSSCEEEEEEEEC-------------------TTSEEEEEECCTTTCCC-CG-GGGGGSCTTTEEEEEECC
T ss_pred cceeeEEEcCCCcEEEEEEcCC-------------------CCCCcEEEECCCCCccc-ch-hhhhhccccCCeEEEECC
Confidence 4456778887899999988774 35678999999976544 22 22334443 499999999
Q ss_pred CCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc----
Q 020916 99 LFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN---- 172 (320)
Q Consensus 99 ~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~---- 172 (320)
||||.|..+. ..++.+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 72 ~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 151 (317)
T 1wm1_A 72 RGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQ 151 (317)
T ss_dssp TTSTTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHT
T ss_pred CCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhh
Confidence 9999998653 3578889999999999999999999999999999999999999999999999986542211000
Q ss_pred ---ccccccccccccccccCcCcH-HHHHHHHhHhhh------------------c-cccCCch-h---H-HHHHHHHhc
Q 020916 173 ---ETNLNRLGVSSSSELLLPNSV-KGLKALLSVATY------------------K-KLWFPSC-L---Y-KDFLEVMFA 224 (320)
Q Consensus 173 ---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------------~-~~~~~~~-~---~-~~~~~~~~~ 224 (320)
....... ............. .....+...... . ....+.. . . ..+.....
T Consensus 152 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (317)
T 1wm1_A 152 DGASRFFPEK-WERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFA- 229 (317)
T ss_dssp SSGGGTSHHH-HHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHH-
T ss_pred ccchhhcHHH-HHHHHhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHH-
Confidence 0000000 0000000000000 000000000000 0 0000000 0 0 00000000
Q ss_pred ChhhHHHHh--hhhhccC--CCCCCCCCC-CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC-ChH
Q 020916 225 NRKERAELL--EGLLISN--KDPTVPNFP-QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE-RPC 298 (320)
Q Consensus 225 ~~~~~~~~~--~~~~~~~--~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~ 298 (320)
....... ..+.... ....+.+++ +|+|+|+|++|.++|++..+.+.+.++ ++++++++++||+++.+ .++
T Consensus 230 --~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p--~~~~~~i~~~gH~~~~~~~~~ 305 (317)
T 1wm1_A 230 --RIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP--EAELHIVEGAGHSYDEPGILH 305 (317)
T ss_dssp --HHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT--TSEEEEETTCCSSTTSHHHHH
T ss_pred --HhhhhhhhcccccccchhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCC--CceEEEECCCCCCCCCcchHH
Confidence 0000000 0000000 012345674 999999999999999999999999998 89999999999998764 578
Q ss_pred HHHHHHHHHHH
Q 020916 299 AYNRCLKQFLA 309 (320)
Q Consensus 299 ~~~~~i~~fl~ 309 (320)
++.+.|.+|+.
T Consensus 306 ~~~~~i~~f~~ 316 (317)
T 1wm1_A 306 QLMIATDRFAG 316 (317)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhc
Confidence 88888888875
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=221.09 Aligned_cols=239 Identities=15% Similarity=0.160 Sum_probs=153.6
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
+...+.+.||.+++|+..++... ..+.+|+|||+||++++.. .|..+++.|++. |+|+++|+||
T Consensus 8 ~~~~i~~~dG~~l~~~~~~p~~~--------------~~~~~~~VvllHG~g~~~~-~~~~~~~~L~~~G~~Vi~~D~rG 72 (305)
T 1tht_A 8 IAHVLRVNNGQELHVWETPPKEN--------------VPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLH 72 (305)
T ss_dssp EEEEEEETTTEEEEEEEECCCTT--------------SCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCB
T ss_pred eEEEEEcCCCCEEEEEEecCccc--------------CCCCCCEEEEecCCccCch-HHHHHHHHHHHCCCEEEEeeCCC
Confidence 34567777899999988765211 0125789999999999999 999999999886 9999999999
Q ss_pred C-CCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 101 F-GGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 101 ~-G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
| |.|+.+...++++.+++|+.++++.+ +.++++|+||||||.+|+.+|.+ | +|+++|++++......... ...
T Consensus 73 h~G~S~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~-~~~ 149 (305)
T 1tht_A 73 HVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLE-KAL 149 (305)
T ss_dssp CC--------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHH-HHH
T ss_pred CCCCCCCcccceehHHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHH-HHh
Confidence 9 99987666788889999988888865 77899999999999999999988 7 8999999876432110000 000
Q ss_pred ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcCh-hhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANR-KERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
.......... ..+... ... ........+........ ...... ...+.++++|+|+|
T Consensus 150 ~~~~~~~~~~-~~~~~~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~i~~PvLii 206 (305)
T 1tht_A 150 GFDYLSLPID-ELPNDL------------DFE-GHKLGSEVFVRDCFEHHWDTLDST---------LDKVANTSVPLIAF 206 (305)
T ss_dssp SSCGGGSCGG-GCCSEE------------EET-TEEEEHHHHHHHHHHTTCSSHHHH---------HHHHTTCCSCEEEE
T ss_pred hhhhhhcchh-hCcccc------------ccc-ccccCHHHHHHHHHhccccchhhH---------HHHHhhcCCCEEEE
Confidence 0000000000 000000 000 00000011111111000 000000 11356789999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHH
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNR 302 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 302 (320)
+|++|.++|++..+.+.+.++..++++++++++||.++ ++|+.+.+
T Consensus 207 ~G~~D~~vp~~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~~ 252 (305)
T 1tht_A 207 TANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRN 252 (305)
T ss_dssp EETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHH
T ss_pred EeCCCCccCHHHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHHH
Confidence 99999999999999999987534789999999999986 88875433
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=221.81 Aligned_cols=235 Identities=19% Similarity=0.288 Sum_probs=145.4
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhh-ccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCc--EEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALT-KKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDK--CVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~--~~lvGhS~ 139 (320)
+|+|||+||++++.. .|..+++.|+ +.|+|+++|+||||.|.... .++++++++++.++++.++.++ ++|+||||
T Consensus 16 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~-~~~~~~~a~~l~~~l~~l~~~~~p~~lvGhSm 93 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERH-CDNFAEAVEMIEQTVQAHVTSEVPVILVGYSL 93 (264)
T ss_dssp BCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC--------CHHHHHHHHHHHTTCCTTSEEEEEEETH
T ss_pred CCcEEEEcCCCCCHH-HHHHHHHHhcccCceEEEecCCCCCCCCCCC-ccCHHHHHHHHHHHHHHhCcCCCceEEEEECH
Confidence 489999999999999 9999999998 55999999999999998643 3678899999999999998876 99999999
Q ss_pred hHHHHHH---HHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc--ccCCchh
Q 020916 140 GGMVSFK---VAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK--LWFPSCL 214 (320)
Q Consensus 140 Gg~~a~~---~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 214 (320)
||.+|+. +|.++|++|+++|++++.......... .........+...+.... ............ .......
T Consensus 94 GG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1r3d_A 94 GGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEK-AARWQHDQQWAQRFSQQP---IEHVLSDWYQQAVFSSLNHEQ 169 (264)
T ss_dssp HHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHH-HHHHHHHHHHHHHHHHSC---HHHHHHHHTTSGGGTTCCHHH
T ss_pred hHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhh-hhhhcccHHHHHHhcccc---HHHHHHHHhhhhhhhccCHHH
Confidence 9999999 888999999999999875432111000 000000000000000000 001111000000 0011111
Q ss_pred HHHHHHHHhcC-hhhHHHHhhhhh---ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCc
Q 020916 215 YKDFLEVMFAN-RKERAELLEGLL---ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290 (320)
Q Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 290 (320)
...+....... ............ ..+....+.++++|+++|+|++|..++ .+.+.+. .++++++++||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~~---~~~~~i~~~gH 241 (264)
T 1r3d_A 170 RQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESSG---LSYSQVAQAGH 241 (264)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHHC---SEEEEETTCCS
T ss_pred HHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHhC---CcEEEcCCCCC
Confidence 11222111111 111111111110 011113456789999999999997542 2344442 57999999999
Q ss_pred ccccCChHHHHHHHHHHHHhh
Q 020916 291 LVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 291 ~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++++|+|+++++.|.+|++++
T Consensus 242 ~~~~e~p~~~~~~i~~fl~~~ 262 (264)
T 1r3d_A 242 NVHHEQPQAFAKIVQAMIHSI 262 (264)
T ss_dssp CHHHHCHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHh
Confidence 999999999999999999875
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=231.29 Aligned_cols=256 Identities=11% Similarity=0.055 Sum_probs=168.9
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCC--CCCccccHHHHHHHhhccceEEec
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGF--AAEGIVTWQFQVGALTKKYSVYIP 96 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~--~~~~~~~~~~~~~~l~~~~~vi~~ 96 (320)
..++.+++.+ ++..++|+... .+|+|||+||+ +++.. .|..+++.|.+.|+|+++
T Consensus 19 ~~~~~~~v~~-~~~~~~~~~~~---------------------~~p~vv~lHG~G~~~~~~-~~~~~~~~L~~~~~vi~~ 75 (292)
T 3l80_A 19 AALNKEMVNT-LLGPIYTCHRE---------------------GNPCFVFLSGAGFFSTAD-NFANIIDKLPDSIGILTI 75 (292)
T ss_dssp -CCEEEEECC-TTSCEEEEEEC---------------------CSSEEEEECCSSSCCHHH-HTHHHHTTSCTTSEEEEE
T ss_pred hccCcceEEe-cCceEEEecCC---------------------CCCEEEEEcCCCCCcHHH-HHHHHHHHHhhcCeEEEE
Confidence 3456777888 46688887322 56899999954 56677 899999999977999999
Q ss_pred CCCCCCCCC-CCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccc--cccc
Q 020916 97 DLLFFGGSI-TDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTD--SINE 173 (320)
Q Consensus 97 d~~G~G~s~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~ 173 (320)
|+||||.|+ .....++++++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... ....
T Consensus 76 D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 155 (292)
T 3l80_A 76 DAPNSGYSPVSNQANVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSS 155 (292)
T ss_dssp CCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTS
T ss_pred cCCCCCCCCCCCcccccHHHHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhcccc
Confidence 999999999 4555689999999999999999999999999999999999999999999999999996542211 0000
Q ss_pred -cccccccccccccccCcCcHH--HHHHHHhHhhhccccCCchhHHHH-------HHHHhcChh-hHHHHhhhhhccCCC
Q 020916 174 -TNLNRLGVSSSSELLLPNSVK--GLKALLSVATYKKLWFPSCLYKDF-------LEVMFANRK-ERAELLEGLLISNKD 242 (320)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~ 242 (320)
...... . ........... .+..... .++........ ......... ........+...+..
T Consensus 156 ~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 226 (292)
T 3l80_A 156 DLYPQLA--L-RRQKLKTAADRLNYLKDLSR------SHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFK 226 (292)
T ss_dssp SSSHHHH--H-HHHTCCSHHHHHHHHHHHHH------HHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGC
T ss_pred ccchhHH--H-HHHHHhccCchhhhHhhccc------cccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhh
Confidence 000000 0 00000000000 0000000 01111111110 000000000 000000111111112
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
..++. ++|+++|+|++|..++++ . .+.+.++ +.+ ++++++||+++.++|+++++.|.+||++..
T Consensus 227 ~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~--~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 227 TGISE-KIPSIVFSESFREKEYLE-S-EYLNKHT--QTK-LILCGQHHYLHWSETNSILEKVEQLLSNHE 290 (292)
T ss_dssp CCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCT--TCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTCT
T ss_pred hccCC-CCCEEEEEccCccccchH-H-HHhccCC--Cce-eeeCCCCCcchhhCHHHHHHHHHHHHHhcc
Confidence 35666 899999999999999888 6 7777777 777 999999999999999999999999998654
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=219.78 Aligned_cols=237 Identities=15% Similarity=0.161 Sum_probs=168.3
Q ss_pred CceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCC
Q 020916 31 GTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEAD 110 (320)
Q Consensus 31 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~ 110 (320)
|.+|+|...++ .+++|+|||+||++++.. .|. ++..|.+.|+|+++|+||||.|. ....
T Consensus 2 g~~l~y~~~g~------------------~~~~~~vv~~hG~~~~~~-~~~-~~~~l~~g~~v~~~d~~g~g~s~-~~~~ 60 (245)
T 3e0x_A 2 NAMLHYVHVGN------------------KKSPNTLLFVHGSGCNLK-IFG-ELEKYLEDYNCILLDLKGHGESK-GQCP 60 (245)
T ss_dssp CCCCCEEEEEC------------------TTCSCEEEEECCTTCCGG-GGT-TGGGGCTTSEEEEECCTTSTTCC-SCCC
T ss_pred CceeEEEecCC------------------CCCCCEEEEEeCCcccHH-HHH-HHHHHHhCCEEEEecCCCCCCCC-CCCC
Confidence 56677766664 236899999999999999 899 88888867999999999999998 4456
Q ss_pred CChhHHHHHHHHHH------HHhCCCcEEEEEeChhHHHHHHHHHh-CccccccEEEecccccccccccccccccccccc
Q 020916 111 RSPTFQAQCLATGL------AKLGVDKCVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSINETNLNRLGVSS 183 (320)
Q Consensus 111 ~~~~~~~~~l~~~l------~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
++.+++++++.+++ +.++ +++++|||+||.+++.++.+ +|+ |+++|++++......... .....+...
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~-~~~~~~~~~- 135 (245)
T 3e0x_A 61 STVYGYIDNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDK-DFMEKIYHN- 135 (245)
T ss_dssp SSHHHHHHHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCH-HHHHHHHTT-
T ss_pred cCHHHHHHHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccH-HHHHHHHHH-
Confidence 78999999999999 8887 99999999999999999999 999 999999998765421111 000000000
Q ss_pred cccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCC
Q 020916 184 SSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIF 263 (320)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 263 (320)
... ..+..... ..........+..............+......+....+.++++|+++++|++|.++
T Consensus 136 ----~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 202 (245)
T 3e0x_A 136 ----QLD-------NNYLLECI--GGIDNPLSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLT 202 (245)
T ss_dssp ----CCC-------HHHHHHHH--TCSCSHHHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSS
T ss_pred ----HHH-------hhcCcccc--cccchHHHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCC
Confidence 000 00000000 00111111111111111111122222222233344556788999999999999999
Q ss_pred CHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 264 NVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
+.+..+.+.+.++ ++++++++++||+++.++|+++.+.|.+||
T Consensus 203 ~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 203 LVEYSEIIKKEVE--NSELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp CHHHHHHHHHHSS--SEEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcC--CceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 9999999999998 899999999999999999999999999885
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-32 Score=222.43 Aligned_cols=273 Identities=18% Similarity=0.209 Sum_probs=174.8
Q ss_pred hcCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc--------
Q 020916 18 MAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK-------- 89 (320)
Q Consensus 18 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~-------- 89 (320)
...+...++.+ ||.+|+|...++. .+++++|||+||++++.. .|..+++.|.+
T Consensus 65 ln~~~~~~~~i-~g~~i~~~~~~~~-----------------~~~~~plll~HG~~~s~~-~~~~~~~~L~~~~~~~~~~ 125 (388)
T 4i19_A 65 INQYPQFTTEI-DGATIHFLHVRSP-----------------EPDATPMVITHGWPGTPV-EFLDIIGPLTDPRAHGGDP 125 (388)
T ss_dssp HHTSCEEEEEE-TTEEEEEEEECCS-----------------STTCEEEEEECCTTCCGG-GGHHHHHHHHCGGGGTSCG
T ss_pred hccCCcEEEEE-CCeEEEEEEccCC-----------------CCCCCeEEEECCCCCCHH-HHHHHHHHHhCcccccCCC
Confidence 34566666777 7999999876541 246789999999999999 99999999998
Q ss_pred --cceEEecCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 90 --KYSVYIPDLLFFGGSITDEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 90 --~~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
.|+|+++|+||||.|+.+.. .++.+++++++.++++.++.++++++||||||.+++.+|.++|++|++++++++...
T Consensus 126 ~~~~~vi~~dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 126 ADAFHLVIPSLPGFGLSGPLKSAGWELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTN 205 (388)
T ss_dssp GGCEEEEEECCTTSGGGCCCSSCCCCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCC
T ss_pred CCCeEEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCC
Confidence 79999999999999998765 689999999999999999999999999999999999999999999999999987554
Q ss_pred ccccccc-ccccccc---cccccc------------ccCc--------CcHHHHHHHH-hHhhhcc-------ccCC-ch
Q 020916 167 MTDSINE-TNLNRLG---VSSSSE------------LLLP--------NSVKGLKALL-SVATYKK-------LWFP-SC 213 (320)
Q Consensus 167 ~~~~~~~-~~~~~~~---~~~~~~------------~~~~--------~~~~~~~~~~-~~~~~~~-------~~~~-~~ 213 (320)
....... ..+.... ...... ...+ .....+..++ ....... ..+. ++
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d~ 285 (388)
T 4i19_A 206 LSGEPGELETLSDADKARLAVSERFLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRDL 285 (388)
T ss_dssp BCCCGGGGGGCCHHHHHHHHTHHHHHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHHH
T ss_pred CCCcccccccCCHHHHHHHHHHHHHHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHHH
Confidence 3221000 0000000 000000 0000 0000000000 0000000 0000 11
Q ss_pred hHHHHHHHHh-cChhhHHHHhhhhh--ccC--CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCC
Q 020916 214 LYKDFLEVMF-ANRKERAELLEGLL--ISN--KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKA 288 (320)
Q Consensus 214 ~~~~~~~~~~-~~~~~~~~~~~~~~--~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (320)
.......... .........+.... ... ....+..+++|+++++|.+|...++....+ ...+ ..+++.+++++
T Consensus 286 ll~~~~~y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p~~~~~--~~~~-~~~~~~~~~~g 362 (388)
T 4i19_A 286 MLTHISLFWFTATGGSAAQAHYELKPFLPITSLIGRSPTLDVPMGVAVYPGALFQPVRSLAE--RDFK-QIVHWAELDRG 362 (388)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTGGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCCHHHHH--HHBT-TEEEEEECSSC
T ss_pred HHHHHHHHHhcCCchhHHHHHHHhhcccccccccccCCCCCCCEEEEeCCcccccccHHHHH--HhCC-CeEEEEECCCC
Confidence 1111111111 11111111121111 111 122567899999999999996555432221 2222 24678889999
Q ss_pred CcccccCChHHHHHHHHHHHHhhh
Q 020916 289 GHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 289 gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
||++++|+|+.+++.|.+|++++.
T Consensus 363 GHf~~~E~Pe~~~~~l~~fl~~~~ 386 (388)
T 4i19_A 363 GHFSAMEEPDLFVDDLRTFNRTLK 386 (388)
T ss_dssp BSSHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCccchhcHHHHHHHHHHHHHHHh
Confidence 999999999999999999998864
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-33 Score=223.37 Aligned_cols=125 Identities=22% Similarity=0.257 Sum_probs=103.7
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc-cceEEecCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK-KYSVYIPDL 98 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~-~~~vi~~d~ 98 (320)
+++..++.+.||.+++|...|+ +++++|||+||++++.. . ..+...+.. .|+|+++|+
T Consensus 10 ~~~~~~~~~~~g~~l~y~~~G~-------------------~~g~pvvllHG~~~~~~-~-~~~~~~~~~~~~~vi~~D~ 68 (313)
T 1azw_A 10 PYQQGSLKVDDRHTLYFEQCGN-------------------PHGKPVVMLHGGPGGGC-N-DKMRRFHDPAKYRIVLFDQ 68 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEEC-------------------TTSEEEEEECSTTTTCC-C-GGGGGGSCTTTEEEEEECC
T ss_pred ccccceEEcCCCCEEEEEecCC-------------------CCCCeEEEECCCCCccc-c-HHHHHhcCcCcceEEEECC
Confidence 4566778887899999987774 35678999999876554 2 223344543 499999999
Q ss_pred CCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 99 LFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 99 ~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
||||.|..+. ..++.+++++|+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 69 ~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 69 RGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp TTSTTSBSTTCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCcCCCCCcccccccHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 9999998653 347889999999999999999999999999999999999999999999999998754
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=234.64 Aligned_cols=272 Identities=14% Similarity=0.137 Sum_probs=172.2
Q ss_pred CceEEEcCCCce----eeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcccc-------------HHHHH
Q 020916 22 QPHAVEIEPGTT----MNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVT-------------WQFQV 84 (320)
Q Consensus 22 ~~~~~~~~~g~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~-------------~~~~~ 84 (320)
+...+.+++|.+ |+|...|+.. ...+|+|||+||+++++. . |..++
T Consensus 13 ~~~~~~~~~g~~l~~~i~y~~~g~~~----------------~~~~p~vll~HG~~~~~~-~~~~~~~~~~~~~~w~~~~ 75 (377)
T 3i1i_A 13 ILKEYTFENGRTIPVQMGYETYGTLN----------------RERSNVILICHYFSATSH-AAGKYTAHDEESGWWDGLI 75 (377)
T ss_dssp EEEEEECTTSCEEEEEEEEEEESCCC----------------TTCCCEEEEECCTTCCSC-CSSCSSTTCSSCCTTTTTE
T ss_pred eecceeecCCCEeeeeEEEEeecccC----------------CCCCCEEEEeccccCcch-hccccccccccccchhhhc
Confidence 445566666654 5777766421 124689999999999977 6 88887
Q ss_pred ---HHhhcc-ceEEecCCCCCCCCC-------CCC--------------CCCChhHHHHHHHHHHHHhCCCcEE-EEEeC
Q 020916 85 ---GALTKK-YSVYIPDLLFFGGSI-------TDE--------------ADRSPTFQAQCLATGLAKLGVDKCV-LVGFS 138 (320)
Q Consensus 85 ---~~l~~~-~~vi~~d~~G~G~s~-------~~~--------------~~~~~~~~~~~l~~~l~~~~~~~~~-lvGhS 138 (320)
+.|... |+|+++|+||||.|. .+. ..++++++++|+.+++++++.++++ |+|||
T Consensus 76 ~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS 155 (377)
T 3i1i_A 76 GPGKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPS 155 (377)
T ss_dssp ETTSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEET
T ss_pred CCCCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeC
Confidence 566555 999999999997743 111 1458899999999999999999986 99999
Q ss_pred hhHHHHHHHHHhCccccccEEE-ecccccccccccccc---cccc-ccccccccc----CcCc-HHHHH----------H
Q 020916 139 YGGMVSFKVAELYPNLVQAMVV-SGSILAMTDSINETN---LNRL-GVSSSSELL----LPNS-VKGLK----------A 198 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl-~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~----~~~~-~~~~~----------~ 198 (320)
|||.+|+.+|.++|++|+++|+ +++............ .... ....+.... .+.. ..... .
T Consensus 156 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 235 (377)
T 3i1i_A 156 AGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEH 235 (377)
T ss_dssp HHHHHHHHHHHHCTTTBSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHH
T ss_pred HhHHHHHHHHHHChHHHHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHH
Confidence 9999999999999999999999 666553111100000 0000 000000000 0000 00000 0
Q ss_pred HHhHhhhccc-------cCC-chhHHHHHHHHh------cChhhHHHHhhhhhccCC-------CCCCCCCCCcEEEEec
Q 020916 199 LLSVATYKKL-------WFP-SCLYKDFLEVMF------ANRKERAELLEGLLISNK-------DPTVPNFPQRVHLLWG 257 (320)
Q Consensus 199 ~~~~~~~~~~-------~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~P~l~i~g 257 (320)
.+........ +.. +.....++.... ............+...+. ...+.++++|+|+|+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 315 (377)
T 3i1i_A 236 FYETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPC 315 (377)
T ss_dssp HHHHHSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECB
T ss_pred HHHHHhhhhhccccccccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEec
Confidence 0000000000 000 111222222211 011111112222221111 1245678999999999
Q ss_pred CCCCCCCHHHHHHHHHHh----CCCCeEEEEecC-CCcccccCChHHHHHHHHHHHHhhh
Q 020916 258 EDDQIFNVELAHNMKEQL----GADHVTFQGIKK-AGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
++|.++|++..+.+.+.+ + +++++++++ +||++++++|+++++.|.+||++..
T Consensus 316 ~~D~~~~~~~~~~~~~~~~~~g~--~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 316 KQDLLQPSRYNYKMVDLLQKQGK--YAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp TTCSSSCTHHHHHHHHHHHHTTC--CEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCC
T ss_pred CCccccCHHHHHHHHHHHHhcCC--CceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhh
Confidence 999999999999999999 7 899999998 9999999999999999999998753
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-32 Score=213.73 Aligned_cols=246 Identities=16% Similarity=0.154 Sum_probs=174.4
Q ss_pred CCceEEEc---CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH--HHHHHHhhcc-ceEE
Q 020916 21 VQPHAVEI---EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW--QFQVGALTKK-YSVY 94 (320)
Q Consensus 21 ~~~~~~~~---~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~--~~~~~~l~~~-~~vi 94 (320)
.+.+++++ .||.+++|+...+. .+++|+|||+||++++.. .| ..+.+.|.+. |+|+
T Consensus 9 ~~~~~~~~~~~~~g~~l~~~~~~~~-----------------~~~~~~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~ 70 (270)
T 3llc_A 9 IETHAITVGQGSDARSIAALVRAPA-----------------QDERPTCIWLGGYRSDMT-GTKALEMDDLAASLGVGAI 70 (270)
T ss_dssp EEEEEEEESSGGGCEEEEEEEECCS-----------------STTSCEEEEECCTTCCTT-SHHHHHHHHHHHHHTCEEE
T ss_pred CCcceEEEeeccCcceEEEEeccCC-----------------CCCCCeEEEECCCccccc-cchHHHHHHHHHhCCCcEE
Confidence 44556666 57999999855531 124899999999999866 54 3467778665 9999
Q ss_pred ecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh---Cc---cccccEEEeccccccc
Q 020916 95 IPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL---YP---NLVQAMVVSGSILAMT 168 (320)
Q Consensus 95 ~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~---~p---~~v~~lvl~~~~~~~~ 168 (320)
++|+||||.|.......+.+++++|+.++++.++.++++|+|||+||.+++.++.+ +| ++|+++|++++.....
T Consensus 71 ~~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~ 150 (270)
T 3llc_A 71 RFDYSGHGASGGAFRDGTISRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFT 150 (270)
T ss_dssp EECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHH
T ss_pred EeccccCCCCCCccccccHHHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccch
Confidence 99999999998777778999999999999999998999999999999999999999 99 8999999999876432
Q ss_pred ccccccccccccccccccccCcCcHHHHHHHHhHhhhcc-ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC
Q 020916 169 DSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK-LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN 247 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (320)
...... .+. ......+........ ..... ........+............+..
T Consensus 151 ~~~~~~------------~~~---~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 204 (270)
T 3llc_A 151 SDLIEP------------LLG---DRERAELAENGYFEEVSEYSP-----------EPNIFTRALMEDGRANRVMAGMID 204 (270)
T ss_dssp HHTTGG------------GCC---HHHHHHHHHHSEEEECCTTCS-----------SCEEEEHHHHHHHHHTCCTTSCCC
T ss_pred hhhhhh------------hhh---hhhhhhhhccCcccChhhccc-----------chhHHHHHHHhhhhhhhhhhhhhc
Confidence 211000 000 000011110000000 00000 000011112222222333456788
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc-cCChHHHHHHHHHHHHh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH-LERPCAYNRCLKQFLAS 310 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~ 310 (320)
+++|+++++|++|.+++.+..+.+.+.++..++++++++++||++. .+.++++.+.|.+||++
T Consensus 205 ~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 205 TGCPVHILQGMADPDVPYQHALKLVEHLPADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHTSCSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHhcCCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999822399999999999755 46789999999999975
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=216.54 Aligned_cols=228 Identities=14% Similarity=0.065 Sum_probs=163.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
+++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|......++++++++++.++++.++.++++|+|||+|
T Consensus 18 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~G 96 (267)
T 3fla_A 18 DARARLVCLPHAGGSAS-FFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPFGDRPLALFGHSMG 96 (267)
T ss_dssp TCSEEEEEECCTTCCGG-GGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGGTTSCEEEEEETHH
T ss_pred CCCceEEEeCCCCCCch-hHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeChh
Confidence 57899999999999999 99999999988899999999999999887777899999999999999999899999999999
Q ss_pred HHHHHHHHHhCccc----cccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhc-cccC-Cchh
Q 020916 141 GMVSFKVAELYPNL----VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK-KLWF-PSCL 214 (320)
Q Consensus 141 g~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~ 214 (320)
|.+|+.+|.++|++ +++++++++......... .........+...+...... .... ....
T Consensus 97 g~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3fla_A 97 AIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDD--------------DVRGASDERLVAELRKLGGSDAAMLADPEL 162 (267)
T ss_dssp HHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCS--------------CTTCCCHHHHHHHHHHTCHHHHHHHHSHHH
T ss_pred HHHHHHHHHhhhhhccccccEEEECCCCccccccch--------------hhcccchHHHHHHHHHhcCcchhhccCHHH
Confidence 99999999999986 899999987653222100 00001111111111110000 0000 0011
Q ss_pred HHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 215 YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
...+.... ...+..+...... ....+++|+++++|++|.+++.+..+.+.+.++ .++++++++| ||+++.
T Consensus 163 ~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~ 232 (267)
T 3fla_A 163 LAMVLPAI-------RSDYRAVETYRHE-PGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTT-GPADLRVLPG-GHFFLV 232 (267)
T ss_dssp HHHHHHHH-------HHHHHHHHHCCCC-TTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBS-SCEEEEEESS-STTHHH
T ss_pred HHHHHHHH-------HHHHHhhhccccc-ccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcC-CCceEEEecC-Cceeec
Confidence 11111111 0111111112222 226789999999999999999999999999988 2399999998 999999
Q ss_pred CChHHHHHHHHHHHHhhhh
Q 020916 295 ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~~~~ 313 (320)
++|+++.+.|.+||++...
T Consensus 233 ~~~~~~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 233 DQAAPMIATMTEKLAGPAL 251 (267)
T ss_dssp HTHHHHHHHHHHHTC----
T ss_pred cCHHHHHHHHHHHhccccc
Confidence 9999999999999987654
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-32 Score=205.53 Aligned_cols=196 Identities=22% Similarity=0.405 Sum_probs=168.7
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH--HHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF--QVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~--~~~~l~~~-~~vi~~d 97 (320)
++..++.+ +|.+++++.+.+ .+++|+||++||++++.. .|.. +++.|.+. |.|+++|
T Consensus 4 ~~~~~~~~-~g~~l~~~~~~~------------------~~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d 63 (207)
T 3bdi_A 4 LQEEFIDV-NGTRVFQRKMVT------------------DSNRRSIALFHGYSFTSM-DWDKADLFNNYSKIGYNVYAPD 63 (207)
T ss_dssp CEEEEEEE-TTEEEEEEEECC------------------TTCCEEEEEECCTTCCGG-GGGGGTHHHHHHTTTEEEEEEC
T ss_pred ceeEEEee-CCcEEEEEEEec------------------cCCCCeEEEECCCCCCcc-ccchHHHHHHHHhCCCeEEEEc
Confidence 45566777 799999544332 136789999999999999 9999 99999998 9999999
Q ss_pred CCCCCCC---CCCCCCC-ChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 98 LLFFGGS---ITDEADR-SPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 98 ~~G~G~s---~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
+||+|.| ..+...+ +.++.++++..+++.++.++++++|||+||.+++.++.++|++++++|++++......
T Consensus 64 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~---- 139 (207)
T 3bdi_A 64 YPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVESL---- 139 (207)
T ss_dssp CTTSTTSCCCTTTCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGGG----
T ss_pred CCcccccCcccCCCCCcchHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccch----
Confidence 9999999 7666666 8999999999999999999999999999999999999999999999999998631100
Q ss_pred cccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEE
Q 020916 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVH 253 (320)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 253 (320)
. ..+.++++|++
T Consensus 140 -----------------------------------------------------------~---------~~~~~~~~p~l 151 (207)
T 3bdi_A 140 -----------------------------------------------------------K---------GDMKKIRQKTL 151 (207)
T ss_dssp -----------------------------------------------------------H---------HHHTTCCSCEE
T ss_pred -----------------------------------------------------------h---------HHHhhccCCEE
Confidence 0 01245678999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+++|++|..++.+..+.+.+.++ +.++++++++||..+.++++++.+.|.+||++
T Consensus 152 ~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 152 LVWGSKDHVVPIALSKEYASIIS--GSRLEIVEGSGHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp EEEETTCTTTTHHHHHHHHHHST--TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred EEEECCCCccchHHHHHHHHhcC--CceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 99999999999999999999997 89999999999999999999999999999986
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=222.54 Aligned_cols=257 Identities=15% Similarity=0.192 Sum_probs=159.0
Q ss_pred CceEEEcCCC---ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc--cceEEec
Q 020916 22 QPHAVEIEPG---TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK--KYSVYIP 96 (320)
Q Consensus 22 ~~~~~~~~~g---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--~~~vi~~ 96 (320)
+.+.++++++ .+++|+..+. ++|+|||+||++++.. .|..+++.|++ .|+|+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~g~--------------------~~p~lvllHG~~~~~~-~w~~~~~~L~~~~~~~via~ 72 (316)
T 3c5v_A 14 SMEDVEVENETGKDTFRVYKSGS--------------------EGPVLLLLHGGGHSAL-SWAVFTAAIISRVQCRIVAL 72 (316)
T ss_dssp EEEEEEEEETTEEEEEEEEEECS--------------------SSCEEEEECCTTCCGG-GGHHHHHHHHTTBCCEEEEE
T ss_pred ccceEEecCCcceEEEEEEecCC--------------------CCcEEEEECCCCcccc-cHHHHHHHHhhcCCeEEEEe
Confidence 4456777533 4788887663 5789999999999988 99999999998 7999999
Q ss_pred CCCCCCCCCCCC-CCCChhHHHHHHHHHHHHh--CC-CcEEEEEeChhHHHHHHHHHh--CccccccEEEeccccccccc
Q 020916 97 DLLFFGGSITDE-ADRSPTFQAQCLATGLAKL--GV-DKCVLVGFSYGGMVSFKVAEL--YPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 97 d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~--~~-~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~~~ 170 (320)
|+||||.|+.+. ..++++.+++|+.++++++ +. ++++|+||||||.+|+.+|.+ +|+ |+++|++++.......
T Consensus 73 Dl~GhG~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~ 151 (316)
T 3c5v_A 73 DLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMD 151 (316)
T ss_dssp CCTTSTTCBCSCTTCCCHHHHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHH
T ss_pred cCCCCCCCCCCCccccCHHHHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhh
Confidence 999999998654 4589999999999999999 65 689999999999999999986 576 9999999864311000
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh-c--------------------ChhhH
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF-A--------------------NRKER 229 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------------~~~~~ 229 (320)
... ....... .... ................ ................ . .....
T Consensus 152 ~~~-~~~~~~~-~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (316)
T 3c5v_A 152 ALN-SMQNFLR-GRPK-TFKSLENAIEWSVKSG----QIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKT 224 (316)
T ss_dssp HHH-HHHHHHH-HSCS-CBSSHHHHHHHHHHTT----SCCCHHHHHHHHHHHEEECC------------CEEESCCGGGG
T ss_pred hHH-HHHHHHh-hCcc-ccccHHHHHHHhhhcc----cccchhhhhhhhhHHhhhccccccccccccccceeeeecccch
Confidence 000 0000000 0000 0000000000000000 0000000000000000 0 00000
Q ss_pred HHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 230 AELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
........ ......+..+++|+|+|+|++|.+.+.... ....+ +.++++++++||+++.|+|+++++.|.+||.
T Consensus 225 ~~~~~~~~-~~~~~~~~~i~~P~Lli~g~~D~~~~~~~~---~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 298 (316)
T 3c5v_A 225 EKYWDGWF-RGLSNLFLSCPIPKLLLLAGVDRLDKDLTI---GQMQG--KFQMQVLPQCGHAVHEDAPDKVAEAVATFLI 298 (316)
T ss_dssp HHHHHHHH-TTHHHHHHHSSSCEEEEESSCCCCCHHHHH---HHHTT--CSEEEECCCCSSCHHHHSHHHHHHHHHHHHH
T ss_pred hhhhhhhh-hhhHHHhhcCCCCEEEEEecccccccHHHH---HhhCC--ceeEEEcCCCCCcccccCHHHHHHHHHHHHH
Confidence 00000000 000011235789999999999986543222 22334 7899999999999999999999999999998
Q ss_pred hhhh
Q 020916 310 SLHA 313 (320)
Q Consensus 310 ~~~~ 313 (320)
+...
T Consensus 299 ~~~~ 302 (316)
T 3c5v_A 299 RHRF 302 (316)
T ss_dssp HTTS
T ss_pred hccc
Confidence 6543
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=230.11 Aligned_cols=276 Identities=12% Similarity=0.133 Sum_probs=177.5
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhc---c--c---eEEec
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTK---K--Y---SVYIP 96 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~---~--~---~vi~~ 96 (320)
++...||.+|+|+..++...... ...+.+|+|||+||++++.. .|..+++.|.+ . | +|+++
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~----------~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~~~G~~~~~vi~~ 92 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRR----------SRTATRLNLVFLHGSGMSKV-VWEYYLPRLVAADAEGNYAIDKVLLI 92 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTC----------CTTCEEEEEEEECCTTCCGG-GGGGGGGGSCCCBTTTTEEEEEEEEE
T ss_pred cccCCCceEEEEEEEecCCCCCC----------CCCCCCCeEEEEcCCCCcHH-HHHHHHHHHHHhhhhcCcceeEEEEE
Confidence 34455899999988875320000 00023479999999999999 99999999983 2 6 99999
Q ss_pred CCCCCCCCCCCC-----CCCChhHHHHHHHHHHHHhC----CCc--EEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 97 DLLFFGGSITDE-----ADRSPTFQAQCLATGLAKLG----VDK--CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 97 d~~G~G~s~~~~-----~~~~~~~~~~~l~~~l~~~~----~~~--~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
|+||||.|..+. ..+++.++++|+.++++.+. ..+ ++|+||||||.+++.+|.++|++|+++|++++..
T Consensus 93 D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 172 (398)
T 2y6u_A 93 DQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVV 172 (398)
T ss_dssp CCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCC
T ss_pred cCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccc
Confidence 999999997643 35788999999999999754 344 9999999999999999999999999999999876
Q ss_pred cccccc------cccccccc---cccccccccCc--CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcCh--------
Q 020916 166 AMTDSI------NETNLNRL---GVSSSSELLLP--NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANR-------- 226 (320)
Q Consensus 166 ~~~~~~------~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 226 (320)
...... ........ ........... .....+...+...... ..........+........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (398)
T 2y6u_A 173 ITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFF-TNAHSQILQNIIDFERTKASGDDEDGG 251 (398)
T ss_dssp SCCCCCSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTT-TTSCHHHHHHHHHHHEEC--------C
T ss_pred ccccccccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCccc-ccCCHHHHHHHHHhcCccccccccCCC
Confidence 542100 00000000 00000000000 0111111111111100 0112222222222111000
Q ss_pred --------hhHHHHhhhhh--ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 227 --------KERAELLEGLL--ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 227 --------~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
......+..+. ..+....+..+++|+|+|+|++|.++|++..+.+.+.++ ++++++++|+||+++.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~--~~~~~~~~~~gH~~~~e~ 329 (398)
T 2y6u_A 252 PVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ--NYHLDVIPGGSHLVNVEA 329 (398)
T ss_dssp CEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS--SEEEEEETTCCTTHHHHS
T ss_pred ceEecCCchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC--CceEEEeCCCCccchhcC
Confidence 00000000000 000112456789999999999999999999999999998 899999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhc
Q 020916 297 PCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 297 ~~~~~~~i~~fl~~~~~~ 314 (320)
|+++++.|.+||++....
T Consensus 330 p~~~~~~i~~fl~~~~~~ 347 (398)
T 2y6u_A 330 PDLVIERINHHIHEFVLT 347 (398)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999886543
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-32 Score=223.63 Aligned_cols=262 Identities=16% Similarity=0.196 Sum_probs=171.8
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcccc---------HHHHHH---Hh-hccceEEec
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVT---------WQFQVG---AL-TKKYSVYIP 96 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~---------~~~~~~---~l-~~~~~vi~~ 96 (320)
+|.+|+|...|++.. ..+|+|||+||++++.. . |..+++ .| .+.|+|+++
T Consensus 42 ~g~~l~y~~~g~~~~----------------~~~~~vvllHG~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~ 104 (377)
T 2b61_A 42 SYINVAYQTYGTLND----------------EKNNAVLICHALTGDAE-PYFDDGRDGWWQNFMGAGLALDTDRYFFISS 104 (377)
T ss_dssp CSEEEEEEEESCCCT----------------TCCCEEEEECCTTCCSC-SCCSSSCCCTTGGGEETTSSEETTTCEEEEE
T ss_pred cceeEEEEecccccc----------------cCCCeEEEeCCCCCccc-cccccccchhhhhccCcccccccCCceEEEe
Confidence 566788887775211 13689999999999998 7 998885 48 445999999
Q ss_pred CCCC-CCCCCCCCC--------------CCChhHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCccccccEEE
Q 020916 97 DLLF-FGGSITDEA--------------DRSPTFQAQCLATGLAKLGVDKCV-LVGFSYGGMVSFKVAELYPNLVQAMVV 160 (320)
Q Consensus 97 d~~G-~G~s~~~~~--------------~~~~~~~~~~l~~~l~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl 160 (320)
|+|| +|.|+.+.. .++.+++++++.++++.++.++++ |+||||||.+|+.+|.++|++|+++|+
T Consensus 105 D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 184 (377)
T 2b61_A 105 NVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVN 184 (377)
T ss_dssp CCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEE
T ss_pred cCCCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEE
Confidence 9999 688876531 478999999999999999999988 999999999999999999999999999
Q ss_pred ecccccccccccc--ccc-ccc-ccccccc-ccC-cC-cHHH--HHHHHh-----------Hhhhcccc------CCchh
Q 020916 161 SGSILAMTDSINE--TNL-NRL-GVSSSSE-LLL-PN-SVKG--LKALLS-----------VATYKKLW------FPSCL 214 (320)
Q Consensus 161 ~~~~~~~~~~~~~--~~~-~~~-~~~~~~~-~~~-~~-~~~~--~~~~~~-----------~~~~~~~~------~~~~~ 214 (320)
+++.......... ... ..+ ....+.. ... .. .... ...... ........ .....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (377)
T 2b61_A 185 LCSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQ 264 (377)
T ss_dssp ESCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBH
T ss_pred eccCccccccchhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHH
Confidence 9987543211000 000 000 0000000 000 00 0000 000000 00000000 00112
Q ss_pred HHHHHHH----Hh--cChhhHHHHhhhhhccCC-------CCCCCCCCCcEEEEecCCCCCCCH----HHHHHHHHHhCC
Q 020916 215 YKDFLEV----MF--ANRKERAELLEGLLISNK-------DPTVPNFPQRVHLLWGEDDQIFNV----ELAHNMKEQLGA 277 (320)
Q Consensus 215 ~~~~~~~----~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~~P~l~i~g~~D~~~~~----~~~~~~~~~~~~ 277 (320)
...+... +. ............+...+. ...+.++++|+|+|+|++|.++|+ +..+.+.+.++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~- 343 (377)
T 2b61_A 265 VESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGV- 343 (377)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHhhhhhhccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCC-
Confidence 2333221 11 111111122222221111 234577899999999999999999 88888988888
Q ss_pred CCeEEEEec-CCCcccccCChHHHHHHHHHHHHh
Q 020916 278 DHVTFQGIK-KAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 278 ~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++++++++ ++||+++.++|+++++.|.+||++
T Consensus 344 -~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 344 -DLHFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp -EEEEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred -CceEEEeCCCCCchhhhcCHHHHHHHHHHHHhc
Confidence 89999999 999999999999999999999975
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=221.02 Aligned_cols=265 Identities=15% Similarity=0.150 Sum_probs=166.9
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc------------cHHHHHH---Hh-hccceE
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV------------TWQFQVG---AL-TKKYSV 93 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~------------~~~~~~~---~l-~~~~~v 93 (320)
+|.+++|...|++.. +.+|+|||+||++++... .|..+++ .| .+.|+|
T Consensus 29 ~g~~l~y~~~g~~~~----------------~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v 92 (366)
T 2pl5_A 29 SPVVIAYETYGTLSS----------------SKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFI 92 (366)
T ss_dssp SSEEEEEEEEECCCT----------------TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEE
T ss_pred cCceeeEEeccCcCC----------------CCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEE
Confidence 355888887775210 147899999999988762 4777764 44 445999
Q ss_pred EecCCCC--CCCCCCCC---C----------CCChhHHHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCcccccc
Q 020916 94 YIPDLLF--FGGSITDE---A----------DRSPTFQAQCLATGLAKLGVDKC-VLVGFSYGGMVSFKVAELYPNLVQA 157 (320)
Q Consensus 94 i~~d~~G--~G~s~~~~---~----------~~~~~~~~~~l~~~l~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~ 157 (320)
+++|+|| ||.|.... . .++.+++++|+.+++++++.+++ +|+||||||.+|+.+|.++|++|++
T Consensus 93 i~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 172 (366)
T 2pl5_A 93 ICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSN 172 (366)
T ss_dssp EEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEE
T ss_pred EEecCCCcccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhh
Confidence 9999999 89887532 1 36899999999999999999998 8999999999999999999999999
Q ss_pred EEEecccccccccccccc--ccc-c-cccccc-ccc---CcCc---------------HHHHHHHHhHhhhcccc-CCch
Q 020916 158 MVVSGSILAMTDSINETN--LNR-L-GVSSSS-ELL---LPNS---------------VKGLKALLSVATYKKLW-FPSC 213 (320)
Q Consensus 158 lvl~~~~~~~~~~~~~~~--~~~-~-~~~~~~-~~~---~~~~---------------~~~~~~~~~~~~~~~~~-~~~~ 213 (320)
+|++++............ ... + ....+. ..+ .+.. ...+...+......... ....
T Consensus 173 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
T 2pl5_A 173 CIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDF 252 (366)
T ss_dssp EEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTT
T ss_pred eeEeccCccCCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhh
Confidence 999998765322110000 000 0 000000 000 0000 00111111100000000 0000
Q ss_pred hHHHHHHHH----h--cChhhHHHHhhhhhccCCC------CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCC--C
Q 020916 214 LYKDFLEVM----F--ANRKERAELLEGLLISNKD------PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD--H 279 (320)
Q Consensus 214 ~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~ 279 (320)
....+.... . ............+...+.. ..+.++++|+|+|+|++|.++|++..+.+.+.++.. +
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~ 332 (366)
T 2pl5_A 253 AVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKR 332 (366)
T ss_dssp TSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccC
Confidence 000000000 0 0001111111222111111 146788999999999999999999999999988622 6
Q ss_pred eEEEEe-cCCCcccccCChHHHHHHHHHHHHh
Q 020916 280 VTFQGI-KKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 280 ~~~~~~-~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++++++ +++||+++.++|+++++.|.+||++
T Consensus 333 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 333 VFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 364 (366)
T ss_dssp EEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred eEEEEeCCCCCcchhhcChhHHHHHHHHHHcc
Confidence 899999 8999999999999999999999975
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=233.16 Aligned_cols=263 Identities=13% Similarity=0.121 Sum_probs=170.0
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcccc---HHHHHH---Hh-hccceEEecCCCC--
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVT---WQFQVG---AL-TKKYSVYIPDLLF-- 100 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~---~~~~~~---~l-~~~~~vi~~d~~G-- 100 (320)
+|.+++|...|+... ..+|+|||+||++++.. . |..++. .| .+.|+|+++|+||
T Consensus 92 ~g~~l~y~~~G~~~~----------------~~~p~vvllHG~~~~~~-~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~ 154 (444)
T 2vat_A 92 RDVPVAYKSWGRMNV----------------SRDNCVIVCHTLTSSAH-VTSWWPTLFGQGRAFDTSRYFIICLNYLGSP 154 (444)
T ss_dssp EEEEEEEEEESCCCT----------------TSCCEEEEECCTTCCSC-GGGTCGGGBSTTSSBCTTTCEEEEECCTTCS
T ss_pred cceeEEEEEecCCCC----------------CCCCeEEEECCCCcccc-hhhHHHHhcCccchhhccCCEEEEecCCCCC
Confidence 455678877765210 24689999999999998 7 888875 57 4459999999999
Q ss_pred CCCCCCCC---------------CCCChhHHHHHHHHHHHHhCCCc-EEEEEeChhHHHHHHHHHhCccccccEEEeccc
Q 020916 101 FGGSITDE---------------ADRSPTFQAQCLATGLAKLGVDK-CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 101 ~G~s~~~~---------------~~~~~~~~~~~l~~~l~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
+|.|.... ..++++++++|+.+++++++.++ ++|+||||||.+|+.+|.++|++|+++|++++.
T Consensus 155 ~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~ 234 (444)
T 2vat_A 155 FGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATS 234 (444)
T ss_dssp SSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCC
T ss_pred CCCCCCCCCCcccccccccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEecc
Confidence 68886321 13689999999999999999999 999999999999999999999999999999987
Q ss_pred ccccccccccc--cc-cc-ccccccccc-----CcCcHHHHHHH-----------HhHhhhcccc---------------
Q 020916 165 LAMTDSINETN--LN-RL-GVSSSSELL-----LPNSVKGLKAL-----------LSVATYKKLW--------------- 209 (320)
Q Consensus 165 ~~~~~~~~~~~--~~-~~-~~~~~~~~~-----~~~~~~~~~~~-----------~~~~~~~~~~--------------- 209 (320)
........... .. .. ....+.... .+......... +.........
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (444)
T 2vat_A 235 CRQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKE 314 (444)
T ss_dssp SBCCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-------------
T ss_pred ccCCccchhHHHHHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccc
Confidence 64322110000 00 00 000000000 00000000000 0000000000
Q ss_pred -------------CCchhHHHHHHH----Hh--cChhhHHHHhhhhhccC--------CCCCCCCCCCcEEEEecCCCCC
Q 020916 210 -------------FPSCLYKDFLEV----MF--ANRKERAELLEGLLISN--------KDPTVPNFPQRVHLLWGEDDQI 262 (320)
Q Consensus 210 -------------~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P~l~i~g~~D~~ 262 (320)
......+.+.+. +. ............+...+ ....+.++++|+|+|+|++|.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~ 394 (444)
T 2vat_A 315 INGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGL 394 (444)
T ss_dssp --------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSS
T ss_pred cccccccccccccCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCC
Confidence 000111122111 11 01111112222222111 1234677899999999999999
Q ss_pred CCHHHHHHHHHHhCCCCeEEEEec-CCCcccccCChHHHHHHHHHHHHhh
Q 020916 263 FNVELAHNMKEQLGADHVTFQGIK-KAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++.+..+.+.+.++ ++++++++ ++||++++++|+++++.|.+||++.
T Consensus 395 ~p~~~~~~l~~~~p--~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 395 YSFDEHVEMGRSIP--NSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp SCHHHHHHHHHHST--TEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHCC--CcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 99999999999998 89999999 8999999999999999999999754
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-31 Score=218.21 Aligned_cols=285 Identities=14% Similarity=0.150 Sum_probs=177.8
Q ss_pred hHHHHHhcCC--CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHH----
Q 020916 12 LQGLMKMAGV--QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVG---- 85 (320)
Q Consensus 12 ~~~~~~~~~~--~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~---- 85 (320)
...+....++ +..++.+.||.+++|+...+..... ...+++|+|||+||++++.. .|..+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~-----------~~~~~~~~vvl~HG~~~~~~-~~~~~~~~~~~ 83 (377)
T 1k8q_A 16 ISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNS-----------ENIGRRPVAFLQHGLLASAT-NWISNLPNNSL 83 (377)
T ss_dssp HHHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCC-----------TTTTTCCEEEEECCTTCCGG-GGSSSCTTTCH
T ss_pred HHHHHHHcCCCceEEEeEcCCCCEEEEEEecCCCCCc-----------cccCCCCeEEEECCCCCchh-hhhcCCCcccH
Confidence 4455555555 4555677799999997764311000 00136899999999999988 8776554
Q ss_pred --Hhhcc-ceEEecCCCCCCCCCCC-----CC----CCChhHHHH-HHHHHHH----HhCCCcEEEEEeChhHHHHHHHH
Q 020916 86 --ALTKK-YSVYIPDLLFFGGSITD-----EA----DRSPTFQAQ-CLATGLA----KLGVDKCVLVGFSYGGMVSFKVA 148 (320)
Q Consensus 86 --~l~~~-~~vi~~d~~G~G~s~~~-----~~----~~~~~~~~~-~l~~~l~----~~~~~~~~lvGhS~Gg~~a~~~a 148 (320)
.|.+. |+|+++|+||||.|... .. .++++++++ |+.++++ .++.++++++||||||.+++.+|
T Consensus 84 a~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a 163 (377)
T 1k8q_A 84 AFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAF 163 (377)
T ss_dssp HHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHH
Confidence 88887 99999999999999762 21 568888888 8777655 56788999999999999999999
Q ss_pred HhCcc---ccccEEEeccccccccccccc-ccccc----cccccc-cccCcCc--HHHH--------------HHHHhHh
Q 020916 149 ELYPN---LVQAMVVSGSILAMTDSINET-NLNRL----GVSSSS-ELLLPNS--VKGL--------------KALLSVA 203 (320)
Q Consensus 149 ~~~p~---~v~~lvl~~~~~~~~~~~~~~-~~~~~----~~~~~~-~~~~~~~--~~~~--------------~~~~~~~ 203 (320)
.++|+ +|+++|++++........... ..... ...... ....+.. ...+ ...+...
T Consensus 164 ~~~p~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (377)
T 1k8q_A 164 STNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFII 243 (377)
T ss_dssp HHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHH
T ss_pred hcCchhhhhhhEEEEeCCchhcccchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHh
Confidence 99998 899999999875432211100 00000 000000 0000100 0000 0000000
Q ss_pred h-hccccCCchhHHHHHHHHhcCh--hhHHHHhh-----------------hhhcc----CCCCCCCCCCCcEEEEecCC
Q 020916 204 T-YKKLWFPSCLYKDFLEVMFANR--KERAELLE-----------------GLLIS----NKDPTVPNFPQRVHLLWGED 259 (320)
Q Consensus 204 ~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------------~~~~~----~~~~~~~~~~~P~l~i~g~~ 259 (320)
. .............+........ .....+.. .+... .....+.++++|+|+|+|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 323 (377)
T 1k8q_A 244 CGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGN 323 (377)
T ss_dssp HCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETT
T ss_pred cCCCcccCCHHHHHHHhccCCCCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCC
Confidence 0 0001111122222111100000 00000000 00000 01234778899999999999
Q ss_pred CCCCCHHHHHHHHHHhCCCCeE-EEEecCCCccccc---CChHHHHHHHHHHHHh
Q 020916 260 DQIFNVELAHNMKEQLGADHVT-FQGIKKAGHLVHL---ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 260 D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 310 (320)
|.++|++.++.+.+.++ +.+ +++++++||+.++ ++|+++.+.|.+||++
T Consensus 324 D~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 324 DLLADPHDVDLLLSKLP--NLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp CSSSCHHHHHHHHTTCT--TEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHhCc--CcccEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 99999999999999998 776 9999999999996 8899999999999975
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=216.74 Aligned_cols=242 Identities=16% Similarity=0.162 Sum_probs=172.3
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d 97 (320)
..++..++.+ +|.++.|.. +++|+|||+||++++.. .|..+++.|.+. |.|+++|
T Consensus 19 ~~m~~~~~~~-~g~~~~~~~----------------------g~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d 74 (270)
T 3rm3_A 19 SHMSEQYPVL-SGAEPFYAE----------------------NGPVGVLLVHGFTGTPH-SMRPLAEAYAKAGYTVCLPR 74 (270)
T ss_dssp --CCCSSCCC-TTCCCEEEC----------------------CSSEEEEEECCTTCCGG-GTHHHHHHHHHTTCEEEECC
T ss_pred cccCCCccCC-CCCcccccC----------------------CCCeEEEEECCCCCChh-HHHHHHHHHHHCCCEEEEeC
Confidence 3456666666 688888763 25699999999999999 999999999987 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQAQCLATGLAKLG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 175 (320)
+||+|.|.......+.+.+++|+.++++.+. .++++|+|||+||.+++.+|.++|+ |+++|+++++...........
T Consensus 75 ~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~ 153 (270)
T 3rm3_A 75 LKGHGTHYEDMERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMT 153 (270)
T ss_dssp CTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSC
T ss_pred CCCCCCCccccccCCHHHHHHHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchh
Confidence 9999999865556789999999999999997 7899999999999999999999999 999999998764322111000
Q ss_pred c----ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCc
Q 020916 176 L----NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQR 251 (320)
Q Consensus 176 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 251 (320)
. ..+. .............. . .....+......+.... .. ....+.++++|
T Consensus 154 ~~~~~~~~~-~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~-----------~~-----~~~~~~~~~~P 207 (270)
T 3rm3_A 154 GGGELPRYL-DSIGSDLKNPDVKE-------L--AYEKTPTASLLQLARLM-----------AQ-----TKAKLDRIVCP 207 (270)
T ss_dssp C---CCSEE-ECCCCCCSCTTCCC-------C--CCSEEEHHHHHHHHHHH-----------HH-----HHHTGGGCCSC
T ss_pred cchhHHHHH-HHhCccccccchHh-------h--cccccChhHHHHHHHHH-----------HH-----HHhhhhhcCCC
Confidence 0 0000 00000000000000 0 00000111111111110 00 00135667899
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh-HHHHHHHHHHHHhh
Q 020916 252 VHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP-CAYNRCLKQFLASL 311 (320)
Q Consensus 252 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~ 311 (320)
+++++|++|.+++.+..+.+.+.++..++++++++++||+++.+.+ +++.+.|.+||++.
T Consensus 208 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 208 ALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp EEEEEETTCSSSCTTHHHHHHHHSCCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCcccCHHHHHHHHHhcCCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998445699999999999999876 89999999999875
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=209.26 Aligned_cols=198 Identities=21% Similarity=0.249 Sum_probs=167.6
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH--HHHHhhcc-ceEEecC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF--QVGALTKK-YSVYIPD 97 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~--~~~~l~~~-~~vi~~d 97 (320)
++..++.. +|.+++|+..++.. .+++|+||++||++++.. .|.. +++.|.+. |.|+++|
T Consensus 7 ~~~~~~~~-~g~~l~~~~~~p~~----------------~~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d 68 (210)
T 1imj_A 7 QREGTIQV-QGQALFFREALPGS----------------GQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAID 68 (210)
T ss_dssp ECCCCEEE-TTEEECEEEEECSS----------------SCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEEC
T ss_pred cccceEee-CCeEEEEEEeCCCC----------------CCCCceEEEECCCCCccc-eeecchhHHHHHHCCCeEEEec
Confidence 45667777 79999998875421 136899999999999999 8988 58999888 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHH--HHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQA--QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~--~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 175 (320)
+||+|.|.......+.+..+ +++.++++.++.++++++|||+||.+++.++.++|++++++|++++......
T Consensus 69 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~------ 142 (210)
T 1imj_A 69 LPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI------ 142 (210)
T ss_dssp CTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS------
T ss_pred CCCCCCCCCCCCcchhhhcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc------
Confidence 99999998776556666666 8999999999999999999999999999999999999999999998642100
Q ss_pred cccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 176 LNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
. ...+..+++|++++
T Consensus 143 -----------------------------------~------------------------------~~~~~~~~~p~l~i 157 (210)
T 1imj_A 143 -----------------------------------N------------------------------AANYASVKTPALIV 157 (210)
T ss_dssp -----------------------------------C------------------------------HHHHHTCCSCEEEE
T ss_pred -----------------------------------c------------------------------chhhhhCCCCEEEE
Confidence 0 00123567899999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+|++|. ++.+..+.+ +.++ +.++++++++||+++.++|+++.+.|.+|++++
T Consensus 158 ~g~~D~-~~~~~~~~~-~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 158 YGDQDP-MGQTSFEHL-KQLP--NHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp EETTCH-HHHHHHHHH-TTSS--SEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred EcCccc-CCHHHHHHH-hhCC--CCCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 999999 999999988 8887 899999999999999999999999999999864
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=212.22 Aligned_cols=275 Identities=13% Similarity=0.133 Sum_probs=168.3
Q ss_pred hcCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-------
Q 020916 18 MAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK------- 90 (320)
Q Consensus 18 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~------- 90 (320)
...+...++.+ +|.+|+|...++. .+++++|||+||++++.. .|..+++.|.+.
T Consensus 82 ln~~~~~~~~i-~g~~i~~~~~~~~-----------------~~~~~pllllHG~~~s~~-~~~~~~~~L~~~~~~~~~g 142 (408)
T 3g02_A 82 LNSFPQFTTEI-EGLTIHFAALFSE-----------------REDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLP 142 (408)
T ss_dssp HTTSCEEEEEE-TTEEEEEEEECCS-----------------CTTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCC
T ss_pred HhcCCCEEEEE-CCEEEEEEEecCC-----------------CCCCCeEEEECCCCCcHH-HHHHHHHHHhcccccccCc
Confidence 34566667777 7999999887752 246789999999999999 999999999873
Q ss_pred ceEEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCC-cEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 91 YSVYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
|+|+++|+||||.|+.+. ..++.+.+++++.++++.++.+ +++++||||||.+++.+|.++|+ +.++++..+....
T Consensus 143 f~vv~~DlpG~G~S~~~~~~~~~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~-~~~~~l~~~~~~~ 221 (408)
T 3g02_A 143 FHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDA-CKAVHLNFCNMSA 221 (408)
T ss_dssp EEEEEECCTTSTTSCCSCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTT-EEEEEESCCCCCC
T ss_pred eEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCC-ceEEEEeCCCCCC
Confidence 799999999999999865 5689999999999999999997 99999999999999999999976 4555544433322
Q ss_pred ccc-cccccccccc---ccccccc--------------------cCcCcHHHHHHHH-hHhhhcc--ccCCchhHHHHHH
Q 020916 168 TDS-INETNLNRLG---VSSSSEL--------------------LLPNSVKGLKALL-SVATYKK--LWFPSCLYKDFLE 220 (320)
Q Consensus 168 ~~~-~~~~~~~~~~---~~~~~~~--------------------~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~ 220 (320)
... .....+.... ....... ...+....+..++ ....... ....+++......
T Consensus 222 ~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d~~~~~d~ll~~v~~ 301 (408)
T 3g02_A 222 PPEGPSIESLSAAEKEGIARMEKFMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVSL 301 (408)
T ss_dssp CTTCCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHHH
T ss_pred CcccccccCCCHHHHHHHHHHHHHHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccCCCCCHHHHHHHHHH
Confidence 110 0000000000 0000000 0000000000000 0000000 0001111111111
Q ss_pred HHhcC-hhhHHHHhhhhhccCCC-------CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccc
Q 020916 221 VMFAN-RKERAELLEGLLISNKD-------PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292 (320)
Q Consensus 221 ~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 292 (320)
.+... .......+......... ..+..+++|++++.|.+|...++.. +.+... ..+.+.+++++||++
T Consensus 302 y~~t~~~~~s~~~y~e~~~~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~---~~~~~~-~~~~~~~~~~gGHf~ 377 (408)
T 3g02_A 302 YWLTESFPRAIHTYREWVPTASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRS---WIATTG-NLVFFRDHAEGGHFA 377 (408)
T ss_dssp HHHTTHHHHHGGGHHHHTTC-------CTTTTTTCEEEEEEEEECTBSSSCCCHH---HHGGGE-EEEEEEECSSCBSCH
T ss_pred HHhhccchhHHHHHHhhcccccccccccccccCCCcCCCEEEEeCCcccccCcHH---HHHhcC-CeeEEEECCCCcCch
Confidence 11111 11111111111111100 1467789999999999997766543 222222 257788999999999
Q ss_pred ccCChHHHHHHHHHHHHhhhhccc
Q 020916 293 HLERPCAYNRCLKQFLASLHADEQ 316 (320)
Q Consensus 293 ~~~~~~~~~~~i~~fl~~~~~~~~ 316 (320)
++|+|+.+++.|.+|++++....+
T Consensus 378 ~lE~Pe~~~~~l~~fl~~~~~~~~ 401 (408)
T 3g02_A 378 ALERPRELKTDLTAFVEQVWQKGR 401 (408)
T ss_dssp HHHCHHHHHHHHHHHHHHHC----
T ss_pred hhhCHHHHHHHHHHHHHHHHHcCc
Confidence 999999999999999998865443
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-31 Score=205.78 Aligned_cols=223 Identities=18% Similarity=0.230 Sum_probs=159.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCC-ChhHHHHHHHHHHHHhCCC--cEEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADR-SPTFQAQCLATGLAKLGVD--KCVLV 135 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~-~~~~~~~~l~~~l~~~~~~--~~~lv 135 (320)
+++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|.... ... +.+.+++|+.++++.+... +++++
T Consensus 20 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~l~ 98 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSPN-DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYAKVFVF 98 (251)
T ss_dssp CSSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCceEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 36789999999999999 999999999987 999999999999996433 223 7788889999999888654 89999
Q ss_pred EeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhH
Q 020916 136 GFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLY 215 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (320)
|||+||.+++.+|.++|+++++++++++............ ..+...+........ .....
T Consensus 99 G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~--~~~~~ 158 (251)
T 3dkr_A 99 GLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF------------------LKYAEYMNRLAGKSD--ESTQI 158 (251)
T ss_dssp ESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH------------------HHHHHHHHHHHTCCC--CHHHH
T ss_pred EechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH------------------HHHHHHHHhhcccCc--chhhH
Confidence 9999999999999999999999999887764322111000 001111111100000 01111
Q ss_pred HHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCC-CCeEEEEecCCCccccc
Q 020916 216 KDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGA-DHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~ 294 (320)
........ ......... ....+.++++|+++++|++|.+++.+..+.+.+.++. .++++++++++||+++.
T Consensus 159 ~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 230 (251)
T 3dkr_A 159 LAYLPGQL---AAIDQFATT-----VAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITV 230 (251)
T ss_dssp HHHHHHHH---HHHHHHHHH-----HHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCCSCTTT
T ss_pred HhhhHHHH---HHHHHHHHH-----HhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCCccccc
Confidence 11111110 000011110 1124566789999999999999999999999999984 35699999999999998
Q ss_pred CC-hHHHHHHHHHHHHhhh
Q 020916 295 ER-PCAYNRCLKQFLASLH 312 (320)
Q Consensus 295 ~~-~~~~~~~i~~fl~~~~ 312 (320)
+. ++++.+.|.+||+++.
T Consensus 231 ~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 231 NSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp STTHHHHHHHHHHHHHTTC
T ss_pred ccchhHHHHHHHHHHHhhc
Confidence 85 9999999999999864
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-30 Score=203.86 Aligned_cols=222 Identities=13% Similarity=-0.006 Sum_probs=154.6
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-CCCcEEEEEeChhH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-GVDKCVLVGFSYGG 141 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvGhS~Gg 141 (320)
+++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|......++++++++++.++++.+ +.++++|+||||||
T Consensus 51 ~~~lvllHG~~~~~~-~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~lvG~S~Gg 129 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVS-AFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDYALFGHSMGA 129 (280)
T ss_dssp SEEEEEECCTTCCGG-GGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTTCSSSEEEEEETHHH
T ss_pred CceEEEECCCCCChH-HHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCHhH
Confidence 488999999999999 9999999999889999999999999987777789999999999999999 77899999999999
Q ss_pred HHHHHHHHhCccccc----cEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 142 MVSFKVAELYPNLVQ----AMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~----~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
.+|+.+|.++|+++. .++++++.......... . .......+...+...... +......
T Consensus 130 ~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~--~------------~~~~~~~~~~~~~~~~~~----~~~~~~~ 191 (280)
T 3qmv_A 130 LLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRA--D------------HTLSDTALREVIRDLGGL----DDADTLG 191 (280)
T ss_dssp HHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCC--G------------GGSCHHHHHHHHHHHTCC----C------
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCccc--c------------cccCHHHHHHHHHHhCCC----ChhhhcC
Confidence 999999999998877 77777765422111000 0 000111111111111110 1000000
Q ss_pred HHHHHhc-ChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc--
Q 020916 218 FLEVMFA-NRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL-- 294 (320)
Q Consensus 218 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-- 294 (320)
..... ............. ......+..+++|+++|+|++|.+++.+..+.+.+.++ ...+++++++ ||+.+.
T Consensus 192 --~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~~~ 266 (280)
T 3qmv_A 192 --AAYFDRRLPVLRADLRACE-RYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT-GSFLRRHLPG-NHFFLNGG 266 (280)
T ss_dssp -----CCTTHHHHHHHHHHHH-TCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS-SCEEEEEEEE-ETTGGGSS
T ss_pred --HHHHHHHHHHHHHHHHHHH-hccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcC-CceEEEEecC-CCeEEcCc
Confidence 00000 0000001111111 11123467899999999999999999999999988887 3467788875 999999
Q ss_pred CChHHHHHHHHHHH
Q 020916 295 ERPCAYNRCLKQFL 308 (320)
Q Consensus 295 ~~~~~~~~~i~~fl 308 (320)
++++++++.|.+||
T Consensus 267 ~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 267 PSRDRLLAHLGTEL 280 (280)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHhhC
Confidence 88999999998874
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-28 Score=191.34 Aligned_cols=198 Identities=13% Similarity=0.159 Sum_probs=156.0
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc----ccHHHHHHHhhcc-ceEEecC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI----VTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~----~~~~~~~~~l~~~-~~vi~~d 97 (320)
...+..++| ++.++...+. .+.+|+||++||+++... ..|..+++.|.+. |.|+++|
T Consensus 25 ~~~~~~~~g-~l~~~~~~p~-----------------~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d 86 (249)
T 2i3d_A 25 EVIFNGPAG-RLEGRYQPSK-----------------EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFN 86 (249)
T ss_dssp EEEEEETTE-EEEEEEECCS-----------------STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCc-eEEEEEEcCC-----------------CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEEC
Confidence 667777677 7877655441 136789999999853322 1457888999887 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 172 (320)
+||+|.|..... ...... +|+.++++.+. .++++++|||+||.+++.++.++|+ ++++|++++......
T Consensus 87 ~~g~G~s~~~~~-~~~~~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--- 160 (249)
T 2i3d_A 87 FRSIGRSQGEFD-HGAGEL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD--- 160 (249)
T ss_dssp CTTSTTCCSCCC-SSHHHH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC---
T ss_pred CCCCCCCCCCCC-CccchH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh---
Confidence 999999976543 344444 77777777663 2479999999999999999999998 999999988652100
Q ss_pred ccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcE
Q 020916 173 ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRV 252 (320)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 252 (320)
...+..+++|+
T Consensus 161 ---------------------------------------------------------------------~~~~~~~~~P~ 171 (249)
T 2i3d_A 161 ---------------------------------------------------------------------FSFLAPCPSSG 171 (249)
T ss_dssp ---------------------------------------------------------------------CTTCTTCCSCE
T ss_pred ---------------------------------------------------------------------hhhhcccCCCE
Confidence 11355778999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhCCC---CeEEEEecCCCcccccCChHHHHHHHHHHHHhhhhc
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLGAD---HVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
++++|++|.+++.+..+.+.+.++.. ++++++++++||.+. +.++++.+.|.+||++....
T Consensus 172 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 172 LIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRLNG 235 (249)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999998721 789999999999988 78999999999999986543
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-31 Score=215.51 Aligned_cols=226 Identities=15% Similarity=0.139 Sum_probs=150.6
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc---ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK---YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~---~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGh 137 (320)
+++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..+.. .+.+++++++.++++.+ .++++++||
T Consensus 34 ~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~-~~~~~~~~~l~~~~~~~-~~~~~lvGh 110 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPLW-EQVQGFREAVVPIMAKA-PQGVHLICY 110 (302)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHH-HHHHHHHHHHHHHHHHC-TTCEEEEEE
T ss_pred CCCCeEEEECCCCCChh-HHHHHHHHHHhcCCCcEEEEeccCCCccchhhHH-HHHHHHHHHHHHHhhcC-CCcEEEEEE
Confidence 47889999999999999 999999999886 9999999999999875432 46777788888888887 689999999
Q ss_pred ChhHHHHHHHHHhCcc-ccccEEEecccccccccccccccccccccccccccCcCcHHH-HHHHHhHhh-----hccccC
Q 020916 138 SYGGMVSFKVAELYPN-LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKG-LKALLSVAT-----YKKLWF 210 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~ 210 (320)
||||.+++.++.++|+ +|+++|+++++........ ...... ....... ......... ....+.
T Consensus 111 S~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (302)
T 1pja_A 111 SQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDT-DYLKWL---------FPTSMRSNLYRICYSPWGQEFSICNYWH 180 (302)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCC-HHHHHH---------CTTCCHHHHHHHHTSTTGGGSTGGGGBC
T ss_pred CHHHHHHHHHHHhcCccccCEEEEECCCcccccccc-hhhhhH---------HHHHHHHHHhhccchHHHHHhhhhhccc
Confidence 9999999999999999 7999999998764322110 000000 0000000 000000000 000000
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccC-------CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCC------
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISN-------KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGA------ 277 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------ 277 (320)
.......+.... .+...+.... ....+.+++ |+++|+|++|.+++++..+.+.+..+.
T Consensus 181 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 1pja_A 181 DPHHDDLYLNAS--------SFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEM 251 (302)
T ss_dssp CTTCHHHHHHHC--------SSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECG
T ss_pred Chhhhhhhhccc--------hHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccch
Confidence 011111111100 0000000000 012356788 999999999999998877776554440
Q ss_pred -------------------CCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 278 -------------------DHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 278 -------------------~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
.++++++++++||+++.|+|+++++.|.+||
T Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 252 EEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp GGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred hhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 1289999999999999999999999999886
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=193.99 Aligned_cols=213 Identities=13% Similarity=0.042 Sum_probs=158.8
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
+..++++ +|.++.++.+.. ++|+||++||++++.. .|..+++.|.+. |.|+++|+||
T Consensus 4 ~~~~~~~-~g~~~~~~~~~~--------------------~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g 61 (238)
T 1ufo_A 4 RTERLTL-AGLSVLARIPEA--------------------PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPR 61 (238)
T ss_dssp EEEEEEE-TTEEEEEEEESS--------------------CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTT
T ss_pred eeccccc-CCEEEEEEecCC--------------------CccEEEEECCCcccch-HHHHHHHHHHhCCCEEEEecCCC
Confidence 3445566 677776665542 6899999999999999 999999999888 9999999999
Q ss_pred CCCCCCCCCCCC-----------hhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 101 FGGSITDEADRS-----------PTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 101 ~G~s~~~~~~~~-----------~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+|.|........ .+..++|+.++++.+ +.++++++|||+||.+++.++.++|+.+.+++++++...
T Consensus 62 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~ 141 (238)
T 1ufo_A 62 HGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFP 141 (238)
T ss_dssp STTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSC
T ss_pred CccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCcc
Confidence 999986554433 556778888887765 447899999999999999999999998999888876542
Q ss_pred ccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCC
Q 020916 167 MTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVP 246 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (320)
...... . . ..++. . . .+...+....+.
T Consensus 142 ~~~~~~--~-------------~-------------------~~~~~-~----~--------------~~~~~~~~~~~~ 168 (238)
T 1ufo_A 142 MKLPQG--Q-------------V-------------------VEDPG-V----L--------------ALYQAPPATRGE 168 (238)
T ss_dssp CCCCTT--C-------------C-------------------CCCHH-H----H--------------HHHHSCGGGCGG
T ss_pred chhhhh--h-------------c-------------------cCCcc-c----c--------------hhhcCChhhhhh
Confidence 211000 0 0 01111 0 0 000011122345
Q ss_pred CC-CCcEEEEecCCCCCCCHHHHHHHHHHhC-CC---CeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 247 NF-PQRVHLLWGEDDQIFNVELAHNMKEQLG-AD---HVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 247 ~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
.+ ++|+++++|++|..+|.+..+.+.+.++ .. ++++++++++||.++.+.++++.+.|.+|++
T Consensus 169 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 169 AYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp GGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred hccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHh
Confidence 56 7999999999999999999999998886 33 7899999999999998888877777777765
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=208.63 Aligned_cols=242 Identities=14% Similarity=0.076 Sum_probs=152.3
Q ss_pred CCCCeEEEEcCCCCCccccHH----------------HHHHHhhcc-ceEEecCCCCCCCCCCCCC-------CCChhHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ----------------FQVGALTKK-YSVYIPDLLFFGGSITDEA-------DRSPTFQ 116 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~----------------~~~~~l~~~-~~vi~~d~~G~G~s~~~~~-------~~~~~~~ 116 (320)
+++|+|||+||++++.. .|. .+++.|.+. |+|+++|+||||.|..... .++++.+
T Consensus 48 ~~~~~vv~~hG~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 126 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGE-QLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTW 126 (354)
T ss_dssp CCEEEEEEECCTTCCHH-HHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHH
T ss_pred CCCCEEEEECCCCCCcc-ccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHH
Confidence 46789999999999887 666 889999887 9999999999999986553 5778889
Q ss_pred HHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhC-ccccccEEEeccccccccccccc------ccccccccc--
Q 020916 117 AQCLATGLAK----LGVDKCVLVGFSYGGMVSFKVAELY-PNLVQAMVVSGSILAMTDSINET------NLNRLGVSS-- 183 (320)
Q Consensus 117 ~~~l~~~l~~----~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~------~~~~~~~~~-- 183 (320)
++|+.++++. ++.++++++|||+||.+++.+|.++ |++|+++|++++.+......... .........
T Consensus 127 ~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (354)
T 2rau_A 127 ISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIY 206 (354)
T ss_dssp HHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhccc
Confidence 9999999887 4778999999999999999999999 99999999997654321110000 000000000
Q ss_pred ---cccccCcC----------------cHHHHHHHHhHhhhc-----cccCCchhHHHHHHHHhcChhhHHHHhhhhhcc
Q 020916 184 ---SSELLLPN----------------SVKGLKALLSVATYK-----KLWFPSCLYKDFLEVMFANRKERAELLEGLLIS 239 (320)
Q Consensus 184 ---~~~~~~~~----------------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (320)
........ ........+....+. ....+......+......... ......+...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 284 (354)
T 2rau_A 207 VIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDP--YWPYRLSLER 284 (354)
T ss_dssp EEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCS--EEEHHHHHTT
T ss_pred ccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhcc--ccccccccCc
Confidence 00000000 000011111100000 000001111111111100000 0000112223
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh---HHHHHHHHHHHHhh
Q 020916 240 NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP---CAYNRCLKQFLASL 311 (320)
Q Consensus 240 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 311 (320)
+....+.++++|+|+|+|++|.++|. .. +.+. .++++++++++||+++++++ +++++.|.+||++.
T Consensus 285 ~~~~~l~~i~~P~Lii~G~~D~~~p~-~~----~~l~-~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 285 DLKFDYEGILVPTIAFVSERFGIQIF-DS----KILP-SNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp TCCCCCTTCCCCEEEEEETTTHHHHB-CG----GGSC-TTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred ccccccccCCCCEEEEecCCCCCCcc-ch----hhhc-cCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 45577889999999999999987542 22 2332 37899999999999988665 99999999999875
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-30 Score=204.56 Aligned_cols=224 Identities=17% Similarity=0.214 Sum_probs=165.7
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
.+.. +|.+++++...+ ..+|+||++||++++.. .|..+++.|.+. |.|+++|+||+|.
T Consensus 10 ~~~~-~g~~l~~~~~~p-------------------~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~g~ 68 (290)
T 3ksr_A 10 EIPV-GQDELSGTLLTP-------------------TGMPGVLFVHGWGGSQH-HSLVRAREAVGLGCICMTFDLRGHEG 68 (290)
T ss_dssp EEEE-TTEEEEEEEEEE-------------------ESEEEEEEECCTTCCTT-TTHHHHHHHHTTTCEEECCCCTTSGG
T ss_pred EecC-CCeEEEEEEecC-------------------CCCcEEEEeCCCCCCcC-cHHHHHHHHHHCCCEEEEeecCCCCC
Confidence 4444 789999988886 26799999999999999 999999999997 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 177 (320)
|.......+...+++|+.++++.+. .++++|+|||+||.+++.++.++| +++++++++..........
T Consensus 69 s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~---- 142 (290)
T 3ksr_A 69 YASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQ---- 142 (290)
T ss_dssp GGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTS----
T ss_pred CCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhc----
Confidence 9887777888999999999999883 247999999999999999999988 8899998876533221100
Q ss_pred cccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
+. ..... ......+...... . ...... ..+.++++|+|+++|
T Consensus 143 ------------~~--~~~~~-------------~~~~~~~~~~~~~-~-~~~~~~---------~~~~~~~~P~lii~G 184 (290)
T 3ksr_A 143 ------------PK--VSLNA-------------DPDLMDYRRRALA-P-GDNLAL---------AACAQYKGDVLLVEA 184 (290)
T ss_dssp ------------BH--HHHHH-------------STTHHHHTTSCCC-G-GGCHHH---------HHHHHCCSEEEEEEE
T ss_pred ------------cc--ccccC-------------Chhhhhhhhhhhh-h-ccccHH---------HHHHhcCCCeEEEEe
Confidence 00 00000 0000000000000 0 000000 113456789999999
Q ss_pred CCCCCCCHHHHHHHHHHhCC-CCeEEEEecCCCcccccC-ChHHHHHHHHHHHHhhhh
Q 020916 258 EDDQIFNVELAHNMKEQLGA-DHVTFQGIKKAGHLVHLE-RPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~~ 313 (320)
++|.+++.+..+.+.+.++. .++++++++++||.+..+ .++++.+.+.+||++...
T Consensus 185 ~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 242 (290)
T 3ksr_A 185 ENDVIVPHPVMRNYADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEMVV 242 (290)
T ss_dssp TTCSSSCHHHHHHHHHHTTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccChHHHHHHHHHhccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999872 236799999999987654 789999999999987643
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=184.81 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=149.9
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCC-----CCCccccHHHHHHHhhcc-ceE
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGF-----AAEGIVTWQFQVGALTKK-YSV 93 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~-----~~~~~~~~~~~~~~l~~~-~~v 93 (320)
..+...+...|| +++++...+.. .+++|+||++||+ ..+.. .|..+++.|.+. |.|
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~----------------~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~~l~~~g~~v 66 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG----------------IEKSVTGIICHPHPLHGGTMNNK-VVTTLAKALDELGLKT 66 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS----------------CCCSEEEEEECSCGGGTCCTTCH-HHHHHHHHHHHTTCEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC----------------CCCCCEEEEEcCCCCCCCccCCc-hHHHHHHHHHHCCCEE
Confidence 356677888888 99998777531 1367899999993 33444 688899999887 999
Q ss_pred EecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccc
Q 020916 94 YIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTD 169 (320)
Q Consensus 94 i~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 169 (320)
+++|+||+|.|..... ......+|+.++++.+ +.++++++|||+||.+++.++ .+| +++++|++++.....
T Consensus 67 ~~~d~~g~g~s~~~~~--~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~- 141 (208)
T 3trd_A 67 VRFNFRGVGKSQGRYD--NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE- 141 (208)
T ss_dssp EEECCTTSTTCCSCCC--TTTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG-
T ss_pred EEEecCCCCCCCCCcc--chHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC-
Confidence 9999999999986532 2223345555544443 557899999999999999999 666 899999998765000
Q ss_pred cccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCC
Q 020916 170 SINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFP 249 (320)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (320)
....+..++
T Consensus 142 -----------------------------------------------------------------------~~~~~~~~~ 150 (208)
T 3trd_A 142 -----------------------------------------------------------------------GFASLTQMA 150 (208)
T ss_dssp -----------------------------------------------------------------------GGTTCCSCC
T ss_pred -----------------------------------------------------------------------CchhhhhcC
Confidence 001344568
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
+|+++++|++|.+++.+..+.+.+.++ .++++++++++||++..+ .+++.+.|.+||
T Consensus 151 ~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~-~~~~~~~i~~fl 207 (208)
T 3trd_A 151 SPWLIVQGDQDEVVPFEQVKAFVNQIS-SPVEFVVMSGASHFFHGR-LIELRELLVRNL 207 (208)
T ss_dssp SCEEEEEETTCSSSCHHHHHHHHHHSS-SCCEEEEETTCCSSCTTC-HHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHcc-CceEEEEeCCCCCccccc-HHHHHHHHHHHh
Confidence 999999999999999999999999988 349999999999998876 488999999987
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-28 Score=203.11 Aligned_cols=257 Identities=12% Similarity=0.091 Sum_probs=164.9
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH--HHhhccceEEecCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV--GALTKKYSVYIPDL 98 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~--~~l~~~~~vi~~d~ 98 (320)
.+...+.. +|.++..+...+ +.+..|+||++||++++.. .|.... ..+...|+|+++|+
T Consensus 135 ~~~~~i~~-~~~~l~~~~~~~-----------------~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~D~ 195 (405)
T 3fnb_A 135 LKSIEVPF-EGELLPGYAIIS-----------------EDKAQDTLIVVGGGDTSRE-DLFYMLGYSGWEHDYNVLMVDL 195 (405)
T ss_dssp CEEEEEEE-TTEEEEEEEECC-----------------SSSCCCEEEEECCSSCCHH-HHHHHTHHHHHHTTCEEEEECC
T ss_pred cEEEEEeE-CCeEEEEEEEcC-----------------CCCCCCEEEEECCCCCCHH-HHHHHHHHHHHhCCcEEEEEcC
Confidence 34444555 677887655433 1235599999999999888 776655 34455599999999
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 99 LFFGGSITDEADRSPTFQAQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 99 ~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
||+|.|......... +..+|+.++++.+.. ++++|+|||+||.+++.++..+| +|+++|++++.............
T Consensus 196 ~G~G~s~~~~~~~~~-~~~~d~~~~~~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~ 273 (405)
T 3fnb_A 196 PGQGKNPNQGLHFEV-DARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFS 273 (405)
T ss_dssp TTSTTGGGGTCCCCS-CTHHHHHHHHHHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC
T ss_pred CCCcCCCCCCCCCCc-cHHHHHHHHHHHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhh
Confidence 999999644333333 447888899999876 78999999999999999999998 89999999887643221110000
Q ss_pred ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHh--cChhhHHHHhhhhhccCCCCCCCCCCCcEEE
Q 020916 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF--ANRKERAELLEGLLISNKDPTVPNFPQRVHL 254 (320)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 254 (320)
..... +. .....+... ...... .......... .........+..+........+.++++|+|+
T Consensus 274 ~~~~~--------p~---~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 338 (405)
T 3fnb_A 274 TALKA--------PK---TILKWGSKL---VTSVNK-VAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLF 338 (405)
T ss_dssp --------------------------------CCCH-HHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEE
T ss_pred hhhhC--------cH---HHHHHHHHH---hhccch-hHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEE
Confidence 00000 00 000000000 000000 0011111100 0111111222222223333447788999999
Q ss_pred EecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe---cCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 255 LWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI---KKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 255 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
|+|++|.+++++..+.+.+.++ ..+++++++ +++||.++.++++.+.+.|.+||++...
T Consensus 339 i~G~~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 339 LVGAGEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp EEETTSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred EecCCCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 9999999999999999998885 346789999 6677888889999999999999998754
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-28 Score=186.81 Aligned_cols=199 Identities=21% Similarity=0.191 Sum_probs=159.0
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
...+...||.++.++...+. .+.+|+||++||++++.. .|..+++.|.+. |.|+++|+||+
T Consensus 5 ~~~~~~~~g~~l~~~~~~p~-----------------~~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~ 66 (236)
T 1zi8_A 5 GISIQSYDGHTFGALVGSPA-----------------KAPAPVIVIAQDIFGVNA-FMRETVSWLVDQGYAAVCPDLYAR 66 (236)
T ss_dssp TCCEECTTSCEECEEEECCS-----------------SCSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGG
T ss_pred eEEEecCCCCeEEEEEECCC-----------------CCCCCEEEEEcCCCCCCH-HHHHHHHHHHhCCcEEEecccccc
Confidence 34566668999998877652 235789999999999998 999999999986 99999999999
Q ss_pred CCCCCCC---------------CCCChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEe
Q 020916 102 GGSITDE---------------ADRSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVS 161 (320)
Q Consensus 102 G~s~~~~---------------~~~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 161 (320)
|.|.... ...+....++|+.++++.+. .++++++|||+||.+++.++..+| +++++++
T Consensus 67 g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~ 144 (236)
T 1zi8_A 67 QAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGY 144 (236)
T ss_dssp TSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEE
T ss_pred CCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEe
Confidence 9886422 12356667889999999886 468999999999999999999998 8888877
Q ss_pred cccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCC
Q 020916 162 GSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNK 241 (320)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (320)
.+.... +.
T Consensus 145 ~~~~~~------------------------------------------------------------------------~~ 152 (236)
T 1zi8_A 145 YGVGLE------------------------------------------------------------------------KQ 152 (236)
T ss_dssp SCSSGG------------------------------------------------------------------------GC
T ss_pred cCcccc------------------------------------------------------------------------cc
Confidence 653210 00
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCC-CCeEEEEecCCCcccccCCh--------HHHHHHHHHHHHhhh
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGA-DHVTFQGIKKAGHLVHLERP--------CAYNRCLKQFLASLH 312 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~~~ 312 (320)
...+.++++|+++++|++|.+++.+..+.+.+.+.. .++++++++++||.+..+.+ +++.+.+.+||++..
T Consensus 153 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l 232 (236)
T 1zi8_A 153 LNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQ 232 (236)
T ss_dssp GGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred hhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhc
Confidence 112456778999999999999999999999998841 38999999999998876643 578899999998764
Q ss_pred h
Q 020916 313 A 313 (320)
Q Consensus 313 ~ 313 (320)
.
T Consensus 233 ~ 233 (236)
T 1zi8_A 233 S 233 (236)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=191.13 Aligned_cols=192 Identities=17% Similarity=0.147 Sum_probs=154.3
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH--HHHHHHhhcc-ceEEecCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW--QFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~--~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
.+.. +|.++.++...+. +++|+||++||++++.. .| ..+++.|.+. |.|+++|+||+
T Consensus 16 ~~~~-~g~~l~~~~~~p~------------------~~~p~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~ 75 (223)
T 2o2g_A 16 SVSV-GEVKLKGNLVIPN------------------GATGIVLFAHGSGSSRY-SPRNRYVAEVLQQAGLATLLIDLLTQ 75 (223)
T ss_dssp EEEE-TTEEEEEEEECCT------------------TCCEEEEEECCTTCCTT-CHHHHHHHHHHHHHTCEEEEECSSCH
T ss_pred EEec-CCeEEEEEEecCC------------------CCceEEEEecCCCCCCC-ccchHHHHHHHHHCCCEEEEEcCCCc
Confidence 3444 7889998877652 36789999999998877 54 4688889887 99999999999
Q ss_pred CCCCCCCCC----CChhHHHHHHHHHHHHhCCC------cEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 102 GGSITDEAD----RSPTFQAQCLATGLAKLGVD------KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 102 G~s~~~~~~----~~~~~~~~~l~~~l~~~~~~------~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
|.|...... .+.+.+++|+.++++.+... +++++|||+||.+++.++.++|++++++|++++....
T Consensus 76 g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~---- 151 (223)
T 2o2g_A 76 EEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL---- 151 (223)
T ss_dssp HHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG----
T ss_pred CCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc----
Confidence 988654322 68888899999999887533 8999999999999999999999999999999875310
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCc
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQR 251 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 251 (320)
....+.++++|
T Consensus 152 ---------------------------------------------------------------------~~~~~~~~~~P 162 (223)
T 2o2g_A 152 ---------------------------------------------------------------------APSALPHVKAP 162 (223)
T ss_dssp ---------------------------------------------------------------------CTTTGGGCCSC
T ss_pred ---------------------------------------------------------------------CHHHHhcCCCC
Confidence 00134566799
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc-CChHHHHHHHHHHHHhh
Q 020916 252 VHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLASL 311 (320)
Q Consensus 252 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 311 (320)
+++++|++|..+|.+..+.+.+..+ +.++++++++||.+.. +.++++.+.+.+||++.
T Consensus 163 ~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 221 (223)
T 2o2g_A 163 TLLIVGGYDLPVIAMNEDALEQLQT--SKRLVIIPRASHLFEEPGALTAVAQLASEWFMHY 221 (223)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHCCS--SEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEEccccCCCCHHHHHHHHhhCC--CeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHh
Confidence 9999999999998666555555545 8999999999999766 46799999999999864
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-28 Score=178.60 Aligned_cols=169 Identities=15% Similarity=0.125 Sum_probs=142.1
Q ss_pred CCCeEEEEcCCCCCccccHH--HHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQ--FQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~--~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGh 137 (320)
++|+||++||++++.. .|. .+.+.|.+. |.|+++|+||+|.|.......+..+.++++.+.++... .++++++||
T Consensus 3 ~~~~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 81 (176)
T 2qjw_A 3 SRGHCILAHGFESGPD-ALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAATEKGPVVLAGS 81 (176)
T ss_dssp SSCEEEEECCTTCCTT-SHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCcEEEEEeCCCCCcc-HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 6789999999998877 665 888999887 99999999999999865555667777777777777664 578999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
|+||.+++.++.++| ++++|++++....... +
T Consensus 82 S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~----------------------------------------~------ 113 (176)
T 2qjw_A 82 SLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL----------------------------------------P------ 113 (176)
T ss_dssp THHHHHHHHHHTTSC--CSEEEEESCCSCBTTB----------------------------------------C------
T ss_pred CHHHHHHHHHHHhcC--hhheEEECCcCCcccc----------------------------------------C------
Confidence 999999999999988 9999999976532110 0
Q ss_pred HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 218 FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
.+..+++|+++++|++|.++|.+..+.+.+.+ +.+++++ ++||.+ .+.+
T Consensus 114 --------------------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~-~~~H~~-~~~~ 162 (176)
T 2qjw_A 114 --------------------------ALDAAAVPISIVHAWHDELIPAADVIAWAQAR---SARLLLV-DDGHRL-GAHV 162 (176)
T ss_dssp --------------------------CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEE-SSCTTC-TTCH
T ss_pred --------------------------cccccCCCEEEEEcCCCCccCHHHHHHHHHhC---CceEEEe-CCCccc-cccH
Confidence 04567899999999999999999999998887 5788888 889997 4889
Q ss_pred HHHHHHHHHHHHh
Q 020916 298 CAYNRCLKQFLAS 310 (320)
Q Consensus 298 ~~~~~~i~~fl~~ 310 (320)
+++.+.|.+|+++
T Consensus 163 ~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 163 QAASRAFAELLQS 175 (176)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999976
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-28 Score=180.22 Aligned_cols=170 Identities=21% Similarity=0.215 Sum_probs=140.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-c---eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEe
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-Y---SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGF 137 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~---~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGh 137 (320)
++|+|||+||++++.. .|..+++.|.+. | +|+++|+||+|.|.. .+.+++++++.++++.++.++++++||
T Consensus 2 ~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~~~~~~~~~lvG~ 76 (181)
T 1isp_A 2 EHNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY----NNGPVLSRFVQKVLDETGAKKVDIVAH 76 (181)
T ss_dssp CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH----HHHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEECCcCCCHh-HHHHHHHHHHHcCCCCccEEEEecCCCCCchh----hhHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 5689999999999999 999999999887 6 799999999998853 466778899999999999899999999
Q ss_pred ChhHHHHHHHHHhC--ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhH
Q 020916 138 SYGGMVSFKVAELY--PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLY 215 (320)
Q Consensus 138 S~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (320)
||||.+++.++.++ |++|+++|+++++...... ..++
T Consensus 77 S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~-------------------------------------~~~~---- 115 (181)
T 1isp_A 77 SMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG-------------------------------------KALP---- 115 (181)
T ss_dssp THHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS-------------------------------------BCCC----
T ss_pred CccHHHHHHHHHhcCCCceEEEEEEEcCccccccc-------------------------------------ccCC----
Confidence 99999999999998 8999999999987532110 0000
Q ss_pred HHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC
Q 020916 216 KDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE 295 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 295 (320)
......++|+++++|++|.++|++.. .++ +.++++++++||+.+.+
T Consensus 116 ---------------------------~~~~~~~~p~l~i~G~~D~~v~~~~~-----~~~--~~~~~~~~~~gH~~~~~ 161 (181)
T 1isp_A 116 ---------------------------GTDPNQKILYTSIYSSADMIVMNYLS-----RLD--GARNVQIHGVGHIGLLY 161 (181)
T ss_dssp ---------------------------CSCTTCCCEEEEEEETTCSSSCHHHH-----CCB--TSEEEEESSCCTGGGGG
T ss_pred ---------------------------CCCCccCCcEEEEecCCCcccccccc-----cCC--CCcceeeccCchHhhcc
Confidence 00112357999999999999998843 355 88999999999999998
Q ss_pred ChHHHHHHHHHHHHhhh
Q 020916 296 RPCAYNRCLKQFLASLH 312 (320)
Q Consensus 296 ~~~~~~~~i~~fl~~~~ 312 (320)
+| ++.+.|.+||++..
T Consensus 162 ~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 162 SS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp CH-HHHHHHHHHHTTTC
T ss_pred CH-HHHHHHHHHHhccC
Confidence 87 79999999998754
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-27 Score=195.75 Aligned_cols=232 Identities=13% Similarity=0.071 Sum_probs=164.3
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~ 99 (320)
++...+.. ||.+|.++...+.. .++.|+||++||++++.. .|......|.+. |.|+++|+|
T Consensus 127 ~~~v~~~~-dg~~i~~~l~~p~~----------------~~~~P~vl~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~r 188 (386)
T 2jbw_A 127 AERHELVV-DGIPMPVYVRIPEG----------------PGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATFDGP 188 (386)
T ss_dssp EEEEEEEE-TTEEEEEEEECCSS----------------SCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEECCT
T ss_pred eEEEEEEe-CCEEEEEEEEcCCC----------------CCCCCEEEEeCCCCccHH-HHHHHHHHHHhCCCEEEEECCC
Confidence 44445555 79999998776521 135689999999998887 565567777766 999999999
Q ss_pred CCCCC-CCCCCCCChhHHHHHHHHHHHH---hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc
Q 020916 100 FFGGS-ITDEADRSPTFQAQCLATGLAK---LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175 (320)
Q Consensus 100 G~G~s-~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 175 (320)
|+|.| .......+..+.+.++.+++.. ++.++++|+|||+||.+++.++.. |++++++|++ +.........
T Consensus 189 G~G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~--- 263 (386)
T 2jbw_A 189 GQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWD--- 263 (386)
T ss_dssp TSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGG---
T ss_pred CCCCCCCCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHH---
Confidence 99999 3333456777778888888887 556789999999999999999999 8899999999 6553221110
Q ss_pred cccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHh-hhhhccCCCCCCCCCCCcEEE
Q 020916 176 LNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELL-EGLLISNKDPTVPNFPQRVHL 254 (320)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~ 254 (320)
..+. .+.... ....... ...... ..+........+.++++|+|+
T Consensus 264 ------------~~~~---~~~~~~-------------------~~~~g~~-~~~~~~~~~~~~~~~~~~~~~i~~P~Li 308 (386)
T 2jbw_A 264 ------------LETP---LTKESW-------------------KYVSKVD-TLEEARLHVHAALETRDVLSQIACPTYI 308 (386)
T ss_dssp ------------GSCH---HHHHHH-------------------HHHTTCS-SHHHHHHHHHHHTCCTTTGGGCCSCEEE
T ss_pred ------------hccH---HHHHHH-------------------HHHhCCC-CHHHHHHHHHHhCChhhhhcccCCCEEE
Confidence 0000 000000 0000000 000111 112222333456778899999
Q ss_pred EecCCCCCCCHHHHHHHHHHh-CCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 255 LWGEDDQIFNVELAHNMKEQL-GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 255 i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
++|++|. ++++..+.+.+.+ + .++++++++++||.. .++++++.+.|.+||++...
T Consensus 309 i~G~~D~-v~~~~~~~l~~~l~~-~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 309 LHGVHDE-VPLSFVDTVLELVPA-EHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLV 365 (386)
T ss_dssp EEETTSS-SCTHHHHHHHHHSCG-GGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHT
T ss_pred EECCCCC-CCHHHHHHHHHHhcC-CCcEEEEeCCCCcCC-ccchHHHHHHHHHHHHHhcC
Confidence 9999999 8999999999998 4 378999999999965 67788999999999988654
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=199.26 Aligned_cols=230 Identities=16% Similarity=0.163 Sum_probs=154.2
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE 108 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~ 108 (320)
.||.+++++...+.. .++.|+||++||++++.. .|..+...+...|.|+++|+||+|.|..+.
T Consensus 90 ~~g~~l~~~~~~P~~----------------~~~~p~vv~~HG~g~~~~-~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~ 152 (346)
T 3fcy_A 90 VRGARIHAKYIKPKT----------------EGKHPALIRFHGYSSNSG-DWNDKLNYVAAGFTVVAMDVRGQGGQSQDV 152 (346)
T ss_dssp GGGCEEEEEEEEESC----------------SSCEEEEEEECCTTCCSC-CSGGGHHHHTTTCEEEEECCTTSSSSCCCC
T ss_pred CCCCEEEEEEEecCC----------------CCCcCEEEEECCCCCCCC-ChhhhhHHHhCCcEEEEEcCCCCCCCCCCC
Confidence 367777777665421 246789999999999998 888888777666999999999999987653
Q ss_pred CC--------------------CChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEec
Q 020916 109 AD--------------------RSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSG 162 (320)
Q Consensus 109 ~~--------------------~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 162 (320)
.. +......+|+.++++.+ +.++++++|||+||.+++.+|..+|+ |+++|+++
T Consensus 153 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~ 231 (346)
T 3fcy_A 153 GGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEY 231 (346)
T ss_dssp CCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEES
T ss_pred cccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECC
Confidence 21 22334556766666655 23589999999999999999999998 99999998
Q ss_pred ccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC
Q 020916 163 SILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD 242 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (320)
|........ ... .........+..++... .............+...+..
T Consensus 232 p~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~d~~ 280 (346)
T 3fcy_A 232 PFLSDYKRV-------WDL-----DLAKNAYQEITDYFRLF-------------------DPRHERENEVFTKLGYIDVK 280 (346)
T ss_dssp CSSCCHHHH-------HHT-----TCCCGGGHHHHHHHHHH-------------------CTTCTTHHHHHHHHGGGCHH
T ss_pred CcccCHHHH-------hhc-----cccccchHHHHHHHHhc-------------------CCCcchHHHHHHHhCcccHH
Confidence 754211100 000 00000011111111100 00000001111111111112
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
..+.++++|+++++|++|.+++++....+.+.++ .++++++++++||..+ +++.+.+.+||+++.
T Consensus 281 ~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~----~~~~~~i~~fl~~l~ 345 (346)
T 3fcy_A 281 NLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQ-SKKDIKVYPDYGHEPM----RGFGDLAMQFMLELY 345 (346)
T ss_dssp HHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCC-SSEEEEEETTCCSSCC----TTHHHHHHHHHHTTC
T ss_pred HHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcC-CCcEEEEeCCCCCcCH----HHHHHHHHHHHHHhh
Confidence 2346678999999999999999999999999887 4789999999999987 567889999998753
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-27 Score=187.56 Aligned_cols=255 Identities=13% Similarity=0.103 Sum_probs=155.0
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccH-HHHHHHhhccceEEecCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTW-QFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~-~~~~~~l~~~~~vi~~d~~ 99 (320)
..+...||.+++++.+.+.. .+.+|+||++||++ ++.. .| ..+.+.|.+.|.|+++|+|
T Consensus 6 ~~~~~~dg~~l~~~~~~p~~----------------~~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~l~~~~~v~~~d~~ 68 (275)
T 3h04_A 6 YKVITKDAFALPYTIIKAKN----------------QPTKGVIVYIHGGGLMFGKAN-DLSPQYIDILTEHYDLIQLSYR 68 (275)
T ss_dssp EEEECTTSCEEEEEEECCSS----------------SSCSEEEEEECCSTTTSCCTT-CSCHHHHHHHTTTEEEEEECCC
T ss_pred EEEecCCcEEEEEEEEccCC----------------CCCCCEEEEEECCcccCCchh-hhHHHHHHHHHhCceEEeeccc
Confidence 34566689999998776531 13678999999988 5555 44 4778888877999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 179 (320)
|+|.+..+ ...++..+.+..+.+.++.++++|+|||+||.+++.+|.+ ++++++|++++................
T Consensus 69 ~~~~~~~~---~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 3h04_A 69 LLPEVSLD---CIIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYY 143 (275)
T ss_dssp CTTTSCHH---HHHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHH
T ss_pred cCCccccc---hhHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchh
Confidence 99876421 2233444444555555667799999999999999999998 789999999987644221110000000
Q ss_pred cccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH-HHHHHhcChhhHHHHhhh----hhccC-CCCCCCCCCCcEE
Q 020916 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD-FLEVMFANRKERAELLEG----LLISN-KDPTVPNFPQRVH 253 (320)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~P~l 253 (320)
. ........ .................... ...............+.. ..... ....+..++ |+|
T Consensus 144 ~------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l 213 (275)
T 3h04_A 144 A------KIAQSINE---TMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVF 213 (275)
T ss_dssp H------HHHTTSCH---HHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEE
T ss_pred h------cccccchH---HHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEE
Confidence 0 00000000 00000000000000000000 000000000000000000 00000 001224556 999
Q ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh---HHHHHHHHHHHHhhh
Q 020916 254 LLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP---CAYNRCLKQFLASLH 312 (320)
Q Consensus 254 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~ 312 (320)
+++|++|.++|.+..+.+.+.++ +.++++++++||.++.+.+ +++.+.+.+||++..
T Consensus 214 ii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l 273 (275)
T 3h04_A 214 IAHCNGDYDVPVEESEHIMNHVP--HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAIT 273 (275)
T ss_dssp EEEETTCSSSCTHHHHHHHTTCS--SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCChHHHHHHHHhcC--CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998 8899999999999999888 689999999998753
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=177.74 Aligned_cols=169 Identities=12% Similarity=0.114 Sum_probs=137.5
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
++++|||+||++++....|......+.. .++.+|++|++ ..+.+++++++.++++.++ ++++++|||+||
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg 85 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWY-------QADLDRWVLAIRRELSVCT-QPVILIGHSFGA 85 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCS-------SCCHHHHHHHHHHHHHTCS-SCEEEEEETHHH
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCC-------CcCHHHHHHHHHHHHHhcC-CCeEEEEEChHH
Confidence 6789999999999883278776665333 45677888874 3578899999999999988 899999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEV 221 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
.+++.++.++|++++++|++++....... ++..
T Consensus 86 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~---------------------------------------~~~~-------- 118 (191)
T 3bdv_A 86 LAACHVVQQGQEGIAGVMLVAPAEPMRFE---------------------------------------IDDR-------- 118 (191)
T ss_dssp HHHHHHHHTTCSSEEEEEEESCCCGGGGT---------------------------------------CTTT--------
T ss_pred HHHHHHHHhcCCCccEEEEECCCcccccc---------------------------------------Cccc--------
Confidence 99999999999999999999987532110 0000
Q ss_pred HhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc----CCh
Q 020916 222 MFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL----ERP 297 (320)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~ 297 (320)
..+..+++|+++++|++|.++|++..+.+.+.+ ++++++++++||+++. +.|
T Consensus 119 ---------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~ 174 (191)
T 3bdv_A 119 ---------------------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW---DSELVDVGEAGHINAEAGFGPWE 174 (191)
T ss_dssp ---------------------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH---TCEEEECCSCTTSSGGGTCSSCH
T ss_pred ---------------------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc---CCcEEEeCCCCcccccccchhHH
Confidence 246778899999999999999999999998876 6899999999999987 556
Q ss_pred HHHHHHHHHHHHhhh
Q 020916 298 CAYNRCLKQFLASLH 312 (320)
Q Consensus 298 ~~~~~~i~~fl~~~~ 312 (320)
+.+ +.|.+|++++.
T Consensus 175 ~~~-~~i~~fl~~~~ 188 (191)
T 3bdv_A 175 YGL-KRLAEFSEILI 188 (191)
T ss_dssp HHH-HHHHHHHHTTC
T ss_pred HHH-HHHHHHHHHhc
Confidence 665 99999999873
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.1e-28 Score=195.10 Aligned_cols=177 Identities=21% Similarity=0.279 Sum_probs=142.0
Q ss_pred CCCeEEEEcCCCCCccccHH-------HHHHHhhcc-ceEEecCCCCCCCCCCCCCCCC---------------------
Q 020916 62 SKPVVVLVHGFAAEGIVTWQ-------FQVGALTKK-YSVYIPDLLFFGGSITDEADRS--------------------- 112 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~-------~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~--------------------- 112 (320)
.+++|||+||++.+.. .|. .+++.|.+. |.|+++|+||||.|.......+
T Consensus 61 ~~~~vvl~HG~g~~~~-~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (328)
T 1qlw_A 61 KRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHE 139 (328)
T ss_dssp CSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHH
T ss_pred CCccEEEEeCCCCCCC-ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccchh
Confidence 6789999999999888 898 488888877 9999999999999986532100
Q ss_pred -------------------------hhH------------------HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHH
Q 020916 113 -------------------------PTF------------------QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAE 149 (320)
Q Consensus 113 -------------------------~~~------------------~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 149 (320)
+++ .++++.++++.++ +++++|||+||.+++.+|.
T Consensus 140 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvGhS~GG~~a~~~a~ 217 (328)
T 1qlw_A 140 AAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLSHSQSGIYPFQTAA 217 (328)
T ss_dssp HHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEEEGGGTTHHHHHHH
T ss_pred hhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEEECcccHHHHHHHH
Confidence 222 6778888888876 8999999999999999999
Q ss_pred hCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhH
Q 020916 150 LYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKER 229 (320)
Q Consensus 150 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (320)
++|++|+++|++++... .+.
T Consensus 218 ~~p~~v~~~v~~~p~~~-------------------------------------------~~~----------------- 237 (328)
T 1qlw_A 218 MNPKGITAIVSVEPGEC-------------------------------------------PKP----------------- 237 (328)
T ss_dssp HCCTTEEEEEEESCSCC-------------------------------------------CCG-----------------
T ss_pred hChhheeEEEEeCCCCC-------------------------------------------CCH-----------------
Confidence 99999999999987530 000
Q ss_pred HHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCH-----HHHHHHHHHhC--CCCeEEEEecCCC-----cccccCC-
Q 020916 230 AELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNV-----ELAHNMKEQLG--ADHVTFQGIKKAG-----HLVHLER- 296 (320)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~~g-----H~~~~~~- 296 (320)
......+++|+|+++|++|..+|. +..+.+.+.++ +.++++++++++| |+++.+.
T Consensus 238 ------------~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~ 305 (328)
T 1qlw_A 238 ------------EDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRN 305 (328)
T ss_dssp ------------GGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTT
T ss_pred ------------HHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccC
Confidence 001122468999999999999996 78888887774 2378999999665 9999987
Q ss_pred hHHHHHHHHHHHHhhhh
Q 020916 297 PCAYNRCLKQFLASLHA 313 (320)
Q Consensus 297 ~~~~~~~i~~fl~~~~~ 313 (320)
++++.+.|.+||++...
T Consensus 306 ~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 306 NLQVADLILDWIGRNTA 322 (328)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhccc
Confidence 99999999999987643
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=178.27 Aligned_cols=180 Identities=16% Similarity=0.150 Sum_probs=137.0
Q ss_pred CCCeEEEEcCCCCCc---cccHHH-HHHHhhc--cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-CcEEE
Q 020916 62 SKPVVVLVHGFAAEG---IVTWQF-QVGALTK--KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-DKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~---~~~~~~-~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~l 134 (320)
++|+|||+||++++. . .|.. +++.|.+ .|+|+++|+||++. ....+++..+++.++. ++++|
T Consensus 3 ~~p~vv~lHG~~~~~~~~~-~~~~~~~~~l~~~~g~~vi~~d~~g~~~----------~~~~~~~~~~~~~l~~~~~~~l 71 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTH-GWYGWVKKELEKIPGFQCLAKNMPDPIT----------ARESIWLPFMETELHCDEKTII 71 (194)
T ss_dssp CCCEEEEECCSSSSCTTTS-TTHHHHHHHHTTSTTCCEEECCCSSTTT----------CCHHHHHHHHHHTSCCCTTEEE
T ss_pred CCCEEEEECCCCCCCcccc-hHHHHHHHHHhhccCceEEEeeCCCCCc----------ccHHHHHHHHHHHhCcCCCEEE
Confidence 578999999999983 5 6766 7889988 69999999998632 1346778888899988 89999
Q ss_pred EEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchh
Q 020916 135 VGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL 214 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
+|||+||.+++.++.++| |+++|++++......... ... ..++....
T Consensus 72 vG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~-------------------------~~~------~~~~~~~~ 118 (194)
T 2qs9_A 72 IGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN-------------------------ERA------SGYFTRPW 118 (194)
T ss_dssp EEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH-------------------------HHH------TSTTSSCC
T ss_pred EEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh-------------------------hHH------Hhhhcccc
Confidence 999999999999999998 999999998753211000 000 00000000
Q ss_pred HHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 215 YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
.. . .+....+|+++++|++|.++|.+..+.+.+.+ +.++++++++||+++.
T Consensus 119 -------------~~----~---------~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~---~~~~~~~~~~gH~~~~ 169 (194)
T 2qs9_A 119 -------------QW----E---------KIKANCPYIVQFGSTDDPFLPWKEQQEVADRL---ETKLHKFTDCGHFQNT 169 (194)
T ss_dssp -------------CH----H---------HHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH---TCEEEEESSCTTSCSS
T ss_pred -------------cH----H---------HHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc---CCeEEEeCCCCCccch
Confidence 00 0 01124568999999999999999999998887 5699999999999999
Q ss_pred CChHHHHHHHHHHHHhhhhcc
Q 020916 295 ERPCAYNRCLKQFLASLHADE 315 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~~~~~~ 315 (320)
++|+.+++.+ +||++.....
T Consensus 170 ~~p~~~~~~~-~fl~~~~~~~ 189 (194)
T 2qs9_A 170 EFHELITVVK-SLLKVPALEH 189 (194)
T ss_dssp CCHHHHHHHH-HHHTCCCCCC
T ss_pred hCHHHHHHHH-HHHHhhhhhh
Confidence 9999998776 9998866543
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=177.71 Aligned_cols=198 Identities=16% Similarity=0.155 Sum_probs=150.6
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---C--CccccHHHHHHHhhcc-ceEE
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---A--EGIVTWQFQVGALTKK-YSVY 94 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~--~~~~~~~~~~~~l~~~-~~vi 94 (320)
.+..++...+| ++.++...+.... .+++|+||++||++ + ... .|..+++.|.+. |.|+
T Consensus 10 ~~~~~~~~~~g-~~~~~~~~p~~~~--------------~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~~l~~~g~~v~ 73 (220)
T 2fuk_A 10 SAALTLDGPVG-PLDVAVDLPEPDV--------------AVQPVTAIVCHPLSTEGGSMHNK-VVTMAARALRELGITVV 73 (220)
T ss_dssp CEEEEEEETTE-EEEEEEECCCTTS--------------CCCSEEEEEECSCTTTTCSTTCH-HHHHHHHHHHTTTCEEE
T ss_pred ceEEEEeCCCC-eEEEEEEeCCCCC--------------ccccCEEEEECCCCCcCCcccch-HHHHHHHHHHHCCCeEE
Confidence 34556666677 7777655542110 02478999999953 2 333 578899999887 9999
Q ss_pred ecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 95 IPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 95 ~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
++|+||+|.|..... .....++|+.++++.+ +.++++++|||+||.+++.++.++ +++++|++++......
T Consensus 74 ~~d~~g~g~s~~~~~--~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~- 148 (220)
T 2fuk_A 74 RFNFRSVGTSAGSFD--HGDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD- 148 (220)
T ss_dssp EECCTTSTTCCSCCC--TTTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-
T ss_pred EEecCCCCCCCCCcc--cCchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-
Confidence 999999999976542 2245567777776665 345899999999999999999887 7999999998763211
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCC
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQ 250 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (320)
+ ..+. ..+
T Consensus 149 --------------------------------------------------------------~---------~~~~-~~~ 156 (220)
T 2fuk_A 149 --------------------------------------------------------------F---------SDVQ-PPA 156 (220)
T ss_dssp --------------------------------------------------------------C---------TTCC-CCS
T ss_pred --------------------------------------------------------------h---------hhcc-cCC
Confidence 0 0111 157
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
|+++++|++|.+++.+..+.+.+.+. .+.++++++++||.+.. +++++.+.+.+|+++...
T Consensus 157 p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 157 QWLVIQGDADEIVDPQAVYDWLETLE-QQPTLVRMPDTSHFFHR-KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp SEEEEEETTCSSSCHHHHHHHHTTCS-SCCEEEEETTCCTTCTT-CHHHHHHHHHHHHGGGCS
T ss_pred cEEEEECCCCcccCHHHHHHHHHHhC-cCCcEEEeCCCCceehh-hHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999984 38999999999999887 588999999999987653
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=186.65 Aligned_cols=168 Identities=16% Similarity=0.175 Sum_probs=138.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH----------HhCC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA----------KLGV 129 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~----------~~~~ 129 (320)
+.+|+|||+||++++.. .|..+++.|.+. |.|+++|++|+|.+.. ....|+...++ .++.
T Consensus 52 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~--------~~~~d~~~~~~~l~~~~~~~~~~~~ 122 (262)
T 1jfr_A 52 GTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQPD--------SRGRQLLSALDYLTQRSSVRTRVDA 122 (262)
T ss_dssp CCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCHH--------HHHHHHHHHHHHHHHTSTTGGGEEE
T ss_pred CCCCEEEEeCCcCCCch-hHHHHHHHHHhCCCEEEEeCCCCCCCCCc--------hhHHHHHHHHHHHHhccccccccCc
Confidence 46789999999999999 999999999887 9999999999997642 11222222222 3345
Q ss_pred CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
++++++|||+||.+++.++.++|+ ++++|++++...
T Consensus 123 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------------------------------------- 158 (262)
T 1jfr_A 123 TRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------------------------------------- 158 (262)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------------------------
T ss_pred ccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-------------------------------------------
Confidence 689999999999999999999987 999999876421
Q ss_pred CCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhCC-CCeEEEEecC
Q 020916 210 FPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLGA-DHVTFQGIKK 287 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 287 (320)
...+..+++|+++++|++|.+++.+. .+.+.+.++. .+.+++++++
T Consensus 159 --------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 206 (262)
T 1jfr_A 159 --------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRG 206 (262)
T ss_dssp --------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETT
T ss_pred --------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEeCC
Confidence 12456778999999999999999998 9999998872 3569999999
Q ss_pred CCcccccCChHHHHHHHHHHHHhhhh
Q 020916 288 AGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 288 ~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+||+.+.+.++++.+.|.+||++...
T Consensus 207 ~~H~~~~~~~~~~~~~i~~fl~~~l~ 232 (262)
T 1jfr_A 207 ASHFTPNTSDTTIAKYSISWLKRFID 232 (262)
T ss_dssp CCTTGGGSCCHHHHHHHHHHHHHHHS
T ss_pred CCcCCcccchHHHHHHHHHHHHHHhc
Confidence 99999999999999999999987654
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=186.93 Aligned_cols=216 Identities=9% Similarity=0.067 Sum_probs=146.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~ 139 (320)
+.+++|||+||++++.. .|..+++ |.+.++|+++|+||++.+.. ...+++.+++++.++++.+. .++++|+||||
T Consensus 19 ~~~~~lv~lhg~~~~~~-~~~~~~~-l~~~~~v~~~d~~G~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~l~GhS~ 94 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAF-SYASLPR-LKSDTAVVGLNCPYARDPEN--MNCTHGAMIESFCNEIRRRQPRGPYHLGGWSS 94 (265)
T ss_dssp TSSEEEEEECCTTCCGG-GGTTSCC-CSSSEEEEEEECTTTTCGGG--CCCCHHHHHHHHHHHHHHHCSSCCEEEEEETH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHh-cCCCCEEEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 56789999999999999 9999999 87779999999999976653 34789999999999999985 46899999999
Q ss_pred hHHHHHHHHH---hCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccc-----c-C
Q 020916 140 GGMVSFKVAE---LYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL-----W-F 210 (320)
Q Consensus 140 Gg~~a~~~a~---~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~ 210 (320)
||.+|+.+|. .++++++++|++++......... + .....++........ . .
T Consensus 95 Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~-----------------~---~~~~~~~~~~~~~~~~~~~~~~~ 154 (265)
T 3ils_A 95 GGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQL-----------------P---RAFYEHCNSIGLFATQPGASPDG 154 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCC-----------------C---HHHHHHHHHTTTTTTSSSSCSSS
T ss_pred hHHHHHHHHHHHHhCCCCceEEEEEcCCCCCccccc-----------------C---HHHHHHHHHHHHhCCCccccccC
Confidence 9999999998 67778999999987653221100 0 001111111100000 0 0
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEE-EEecCC---CCCC--------------CHHHHHHHH
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVH-LLWGED---DQIF--------------NVELAHNMK 272 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~i~g~~---D~~~--------------~~~~~~~~~ 272 (320)
..+..+.+...+ ...+..+. .........+++|++ +++|++ |..+ +......+.
T Consensus 155 ~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~ 226 (265)
T 3ils_A 155 STEPPSYLIPHF-------TAVVDVML-DYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWD 226 (265)
T ss_dssp CSCCCTTHHHHH-------HHHHHHTT-TCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHH
T ss_pred CHHHHHHHHHHH-------HHHHHHHH-hcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHH
Confidence 000000011100 00011111 111123457899988 999999 9877 333334455
Q ss_pred HHhCCCCeEEEEecCCCcccc--cCChHHHHHHHHHHH
Q 020916 273 EQLGADHVTFQGIKKAGHLVH--LERPCAYNRCLKQFL 308 (320)
Q Consensus 273 ~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~i~~fl 308 (320)
+..+..++++++++|+||+.+ .++|+++++.|.+||
T Consensus 227 ~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 227 TIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp HHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred HhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 554324789999999999999 899999999999997
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-28 Score=187.50 Aligned_cols=220 Identities=16% Similarity=0.147 Sum_probs=133.3
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC---CcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV---DKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~lvGh 137 (320)
+.+++|||+||++++.. .|..+++.|+++|+|+++|+||||.|..+ ..+++.+.+..+++.++. ++++|+||
T Consensus 11 ~~~~~lv~lhg~g~~~~-~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~----~~~~~~~~~~~~~~~l~~~~~~~~~lvGh 85 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA-SFRPLHAFLQGECEMLAAEPPGHGTNQTS----AIEDLEELTDLYKQELNLRPDRPFVLFGH 85 (242)
T ss_dssp TCCCEEESSCCCCHHHH-HHHHHHHHHCCSCCCEEEECCSSCCSCCC----TTTHHHHHHHHTTTTCCCCCCSSCEEECC
T ss_pred CCCceEEEECCCCCCHH-HHHHHHHhCCCCeEEEEEeCCCCCCCCCC----CcCCHHHHHHHHHHHHHhhcCCCEEEEeC
Confidence 57789999999999999 99999999988899999999999999643 233444444555555655 68999999
Q ss_pred ChhHHHHHHHHHhCcc---ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchh
Q 020916 138 SYGGMVSFKVAELYPN---LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL 214 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
||||.+|+.+|.+.++ ..+.+++.+......... .... . .. . ..+... ......+...
T Consensus 86 SmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~---~~~~----------~-~~-~---~~~~~~-~~~~~~~~~~ 146 (242)
T 2k2q_B 86 SMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRK---KVSH----------L-PD-D---QFLDHI-IQLGGMPAEL 146 (242)
T ss_dssp SSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSC---CCSS----------C-TT-H---HHHHTT-CCTTCCCCTT
T ss_pred CHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcc---cccC----------C-CH-H---HHHHHH-HHhCCCChHH
Confidence 9999999999987321 123444433221110000 0000 0 00 0 000000 0000011111
Q ss_pred HHH-HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 215 YKD-FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 215 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
... ...... .......+........ ..+..+++|+++|+|++|..++ .....+.+..+ +.+++++++ ||+++
T Consensus 147 ~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~~--~~~~~~~~~-gH~~~ 219 (242)
T 2k2q_B 147 VENKEVMSFF--LPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWAK--DITFHQFDG-GHMFL 219 (242)
T ss_dssp THHHHTTTTC--CSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTCC--CSEEEEEEC-CCSHH
T ss_pred hcCHHHHHHH--HHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHhc--CCeEEEEeC-CceeE
Confidence 000 000000 0000011111111111 2267899999999999998864 44555666665 667888885 99999
Q ss_pred cCChHHHHHHHHHHHHhh
Q 020916 294 LERPCAYNRCLKQFLASL 311 (320)
Q Consensus 294 ~~~~~~~~~~i~~fl~~~ 311 (320)
.++|+++++.|.+||++.
T Consensus 220 ~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 220 LSQTEEVAERIFAILNQH 237 (242)
T ss_dssp HHHCHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHhhcc
Confidence 999999999999999864
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-27 Score=181.09 Aligned_cols=195 Identities=16% Similarity=0.153 Sum_probs=145.7
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEec--
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIP-- 96 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~-- 96 (320)
...+..+++. +|.+++|+..+.. +++|+||++||++++.. .|..+++.|.+.|.|+++
T Consensus 13 ~~~~e~~~~~-~~~~~~~~~~~~~------------------~~~~~vv~~HG~~~~~~-~~~~~~~~l~~g~~v~~~~~ 72 (226)
T 2h1i_A 13 LGTENLYFQS-NAMMKHVFQKGKD------------------TSKPVLLLLHGTGGNEL-DLLPLAEIVDSEASVLSVRG 72 (226)
T ss_dssp --CCCHHHHH-HSSSCEEEECCSC------------------TTSCEEEEECCTTCCTT-TTHHHHHHHHTTSCEEEECC
T ss_pred ccceeeeecC-CCceeEEecCCCC------------------CCCcEEEEEecCCCChh-HHHHHHHHhccCceEEEecC
Confidence 3445556666 6889999887741 36899999999999999 999999999988999999
Q ss_pred CCCCCCCCCCCC----CCCChhHHHHH---HHHHH----HHh--CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 97 DLLFFGGSITDE----ADRSPTFQAQC---LATGL----AKL--GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 97 d~~G~G~s~~~~----~~~~~~~~~~~---l~~~l----~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
|++|+|.|.... ..++...+.++ +.+++ +.. +.++++++|||+||.+++.++..+|++++++|++++
T Consensus 73 d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~ 152 (226)
T 2h1i_A 73 NVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHP 152 (226)
T ss_dssp SEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESC
T ss_pred cccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCC
Confidence 999999886432 22344444443 33333 333 447899999999999999999999999999999998
Q ss_pred cccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCC
Q 020916 164 ILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDP 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (320)
...... ..
T Consensus 153 ~~~~~~------------------------------------------------------------------------~~ 160 (226)
T 2h1i_A 153 MVPRRG------------------------------------------------------------------------MQ 160 (226)
T ss_dssp CCSCSS------------------------------------------------------------------------CC
T ss_pred CCCcCc------------------------------------------------------------------------cc
Confidence 752110 01
Q ss_pred CCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCC--CeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 244 TVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD--HVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 244 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
....+++|+++++|++|.+++.+..+.+.+.++.. +.++ +++++||....+ ..+.+.+||++
T Consensus 161 ~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~----~~~~~~~~l~~ 224 (226)
T 2h1i_A 161 LANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLTMG----EVEKAKEWYDK 224 (226)
T ss_dssp CCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCHH----HHHHHHHHHHH
T ss_pred cccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCHH----HHHHHHHHHHH
Confidence 12335789999999999999999999998888622 4455 999999998644 44566666654
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=179.03 Aligned_cols=179 Identities=19% Similarity=0.272 Sum_probs=139.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEec-------------------CCCCCCCCCCCCCCCChhHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIP-------------------DLLFFGGSITDEADRSPTFQAQCL 120 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~-------------------d~~G~G~s~~~~~~~~~~~~~~~l 120 (320)
+.+|+||++||++++.. .|..+++.|.+. |.|+++ |++|+ .+.......+.+..++++
T Consensus 21 ~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~~~~~~~~~~~~~ 98 (232)
T 1fj2_A 21 KATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQEDESGIKQAAENI 98 (232)
T ss_dssp CCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCBCHHHHHHHHHHH
T ss_pred CCCceEEEEecCCCccc-hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-CcccccccHHHHHHHHHH
Confidence 46789999999999998 999999999875 999998 66776 333333345677788999
Q ss_pred HHHHHHh---CC--CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHH
Q 020916 121 ATGLAKL---GV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKG 195 (320)
Q Consensus 121 ~~~l~~~---~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
.++++.+ +. ++++++|||+||.+++.++.++|++++++|++++........
T Consensus 99 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~------------------------ 154 (232)
T 1fj2_A 99 KALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------------------------ 154 (232)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS------------------------
T ss_pred HHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc------------------------
Confidence 9999886 55 789999999999999999999999999999999865321100
Q ss_pred HHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHh
Q 020916 196 LKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL 275 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 275 (320)
+ .....+..+++|+++++|++|.+++.+..+.+.+.+
T Consensus 155 ---------------~----------------------------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l 191 (232)
T 1fj2_A 155 ---------------P----------------------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKL 191 (232)
T ss_dssp ---------------C----------------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHH
T ss_pred ---------------c----------------------------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHH
Confidence 0 001235667899999999999999999888887777
Q ss_pred C--C--CCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 276 G--A--DHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 276 ~--~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
. . .+.++++++++||.++.+ . .+.+.+||++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~H~~~~~---~-~~~i~~~l~~~l 228 (232)
T 1fj2_A 192 KTLVNPANVTFKTYEGMMHSSCQQ---E-MMDVKQFIDKLL 228 (232)
T ss_dssp HHHSCGGGEEEEEETTCCSSCCHH---H-HHHHHHHHHHHS
T ss_pred HHhCCCCceEEEEeCCCCcccCHH---H-HHHHHHHHHHhc
Confidence 3 1 169999999999998433 2 367777777654
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=4e-26 Score=184.09 Aligned_cols=217 Identities=15% Similarity=0.057 Sum_probs=146.9
Q ss_pred CCCCeEEEEcCC--CCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-CCCcEEEEEe
Q 020916 61 PSKPVVVLVHGF--AAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-GVDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~--~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvGh 137 (320)
+.+|+|||+||+ +++.. .|..+++.|...|+|+++|+||||.|... ..+++.+++++.+.++.+ +.++++|+||
T Consensus 79 ~~~~~lv~lhG~~~~~~~~-~~~~~~~~L~~~~~v~~~d~~G~G~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~lvGh 155 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQ-VYSRLAEELDAGRRVSALVPPGFHGGQAL--PATLTVLVRSLADVVQAEVADGEFALAGH 155 (319)
T ss_dssp CSSCEEEEECCSSTTCSGG-GGHHHHHHHCTTSEEEEEECTTSSTTCCE--ESSHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCeEEEECCCCcCCCHH-HHHHHHHHhCCCceEEEeeCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 478999999995 66777 99999999976799999999999986543 358888999999888877 5589999999
Q ss_pred ChhHHHHHHHHHhC---ccccccEEEeccccccccc-ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCch
Q 020916 138 SYGGMVSFKVAELY---PNLVQAMVVSGSILAMTDS-INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSC 213 (320)
Q Consensus 138 S~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (320)
||||.+|+.+|.++ |++|+++|++++....... ....... ......+.... ......
T Consensus 156 S~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~-~~~~~~-- 216 (319)
T 3lcr_A 156 SSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFR----------------SALNERFVEYL-RLTGGG-- 216 (319)
T ss_dssp THHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHH----------------HHHHHHHHHHH-HHHCCC--
T ss_pred CHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHH----------------HHHHHHHhhhh-cccCCC--
Confidence 99999999999887 7889999999987533221 0000000 00000000000 000001
Q ss_pred hHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 214 LYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
.....+..+ ......+ .......+++|+++|+|++| .+++.....+.+.++ ...+++++++ +|+.+
T Consensus 217 ~~~~~l~~~-------~~~~~~~----~~~~~~~i~~PvLli~g~~~-~~~~~~~~~~~~~~~-~~~~~~~~~g-~H~~~ 282 (319)
T 3lcr_A 217 NLSQRITAQ-------VWCLELL----RGWRPEGLTAPTLYVRPAQP-LVEQEKPEWRGDVLA-AMGQVVEAPG-DHFTI 282 (319)
T ss_dssp CHHHHHHHH-------HHHHHHT----TTCCCCCCSSCEEEEEESSC-SSSCCCTHHHHHHHH-TCSEEEEESS-CTTGG
T ss_pred chhHHHHHH-------HHHHHHH----hcCCCCCcCCCEEEEEeCCC-CCCcccchhhhhcCC-CCceEEEeCC-CcHHh
Confidence 000001100 0111111 11133678999999999885 555556666777766 4578888886 88888
Q ss_pred cC--ChHHHHHHHHHHHHhhhh
Q 020916 294 LE--RPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 294 ~~--~~~~~~~~i~~fl~~~~~ 313 (320)
++ +|+++++.|.+||++...
T Consensus 283 ~~~~~~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 283 IEGEHVASTAHIVGDWLREAHA 304 (319)
T ss_dssp GSTTTHHHHHHHHHHHHHHHHC
T ss_pred hCcccHHHHHHHHHHHHHhccc
Confidence 76 999999999999998754
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=191.48 Aligned_cols=220 Identities=11% Similarity=0.063 Sum_probs=130.7
Q ss_pred CCCeEEEEcCCCCCcc--ccHHHHHHHhhccceEEecC----CCCCCCCCCCCCCCChhHHHHHHHHHHHH----hCCCc
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQFQVGALTKKYSVYIPD----LLFFGGSITDEADRSPTFQAQCLATGLAK----LGVDK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~~~vi~~d----~~G~G~s~~~~~~~~~~~~~~~l~~~l~~----~~~~~ 131 (320)
.+|+|||+||++++.. ..|..+++.|...|+|+++| +||||.|+. ...++|+.++++. ++.++
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~-------~~~~~d~~~~~~~l~~~l~~~~ 109 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDH-------AHDAEDVDDLIGILLRDHCMNE 109 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCH-------HHHHHHHHHHHHHHHHHSCCCC
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCccc-------cCcHHHHHHHHHHHHHHcCCCc
Confidence 5689999999987544 14678889996669999995 599999852 3345555555543 68889
Q ss_pred EEEEEeChhHHHHHHHHH--hCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh-----
Q 020916 132 CVLVGFSYGGMVSFKVAE--LYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT----- 204 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~--~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 204 (320)
++|+||||||.+|+.+|. .+|++|+++|++++....... ....... ...............
T Consensus 110 ~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~----~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 177 (335)
T 2q0x_A 110 VALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENP----LFTPEGC--------AARKEHVEKLMAEGRGEDSL 177 (335)
T ss_dssp EEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTST----TTSHHHH--------HHHHHHHHHHHHHTCTTCGG
T ss_pred EEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhc----ccCHHHH--------HHHHHHHHHHhhccCccccc
Confidence 999999999999999998 579999999999875422100 0000000 000000000000000
Q ss_pred hccccCCch-hHHHHHHHHhcChhhHHHHhhh-h--hccCCCCCCCCCCCcEEEEecCCCCCCCHHH-----HHHHHHHh
Q 020916 205 YKKLWFPSC-LYKDFLEVMFANRKERAELLEG-L--LISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-----AHNMKEQL 275 (320)
Q Consensus 205 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-----~~~~~~~~ 275 (320)
......... ....+. ..... .....++.. + ...+....+.++++|+|+|+|++|.++|++. .+.+.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~ 255 (335)
T 2q0x_A 178 AMLKHYDIPITPARLA-GGGFP-TLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHT 255 (335)
T ss_dssp GGTTTCSSCCCHHHHH-TCSCS-SHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHS
T ss_pred cchhhccCccCHHHHh-hccCC-CchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhc
Confidence 000000000 000100 00000 000000000 0 0001113567789999999999999999753 46677777
Q ss_pred CCCCeE--------E-----EEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 276 GADHVT--------F-----QGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 276 ~~~~~~--------~-----~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
+ +.+ + ++++++|| ++++.|.+||++..
T Consensus 256 ~--~~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 256 G--CNRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQFLADED 295 (335)
T ss_dssp S--SSCEEEEECCCEECTTSCEEECCHH--------HHHHHHHHHHHHHH
T ss_pred C--ccccccccccchhhhhhcccCCCCC--------HHHHHHHHHHHhhh
Confidence 7 665 6 88999999 45889999998754
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-25 Score=187.36 Aligned_cols=236 Identities=13% Similarity=0.051 Sum_probs=157.2
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
...+.. +|.++.++...+.. .++.|+||++||++++....|..+...|.+. |.|+++|+||+
T Consensus 170 ~v~i~~-~g~~l~~~~~~P~~----------------~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~ 232 (415)
T 3mve_A 170 QLEIPF-EKGKITAHLHLTNT----------------DKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSV 232 (415)
T ss_dssp EEEEEC-SSSEEEEEEEESCS----------------SSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTS
T ss_pred EEEEEE-CCEEEEEEEEecCC----------------CCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCC
Confidence 334444 68888877665421 1367899999999988553666777888766 99999999999
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHhC---CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 102 GGSITDEADRSPTFQAQCLATGLAKLG---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 102 G~s~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|.|.......+....+.++.+.+..+. .++++++|||+||.+++.++..+|++|+++|++++......... ...
T Consensus 233 G~s~~~~~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-~~~-- 309 (415)
T 3mve_A 233 GYSSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASP-QKL-- 309 (415)
T ss_dssp GGGTTSCCCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCH-HHH--
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccH-HHH--
Confidence 999866555556676777777776654 46899999999999999999999999999999998742111000 000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCC--C--CCCCCCcEEE
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDP--T--VPNFPQRVHL 254 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~P~l~ 254 (320)
. .........+....... ...... +...+....... . ..++++|+|+
T Consensus 310 -------~----~~~~~~~~~~~~~~g~~----~~~~~~--------------~~~~~~~~~~~~~~~~~~~~i~~PvLi 360 (415)
T 3mve_A 310 -------Q----QMPKMYLDVLASRLGKS----VVDIYS--------------LSGQMAAWSLKVQGFLSSRKTKVPILA 360 (415)
T ss_dssp -------T----TSCHHHHHHHHHHTTCS----SBCHHH--------------HHHHGGGGCTTTTTTTTSSCBSSCEEE
T ss_pred -------H----HhHHHHHHHHHHHhCCC----ccCHHH--------------HHHHHhhcCcccccccccCCCCCCEEE
Confidence 0 00000111111111000 000011 111111111111 1 3688999999
Q ss_pred EecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 255 LWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 255 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
|+|++|.++|.+..+.+.+..+ +++++++++..+ .+.++++.+.+.+||++..
T Consensus 361 i~G~~D~~vp~~~~~~l~~~~~--~~~l~~i~g~~~---h~~~~~~~~~i~~fL~~~L 413 (415)
T 3mve_A 361 MSLEGDPVSPYSDNQMVAFFST--YGKAKKISSKTI---TQGYEQSLDLAIKWLEDEL 413 (415)
T ss_dssp EEETTCSSSCHHHHHHHHHTBT--TCEEEEECCCSH---HHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCCHHHHHHHHHhCC--CceEEEecCCCc---ccchHHHHHHHHHHHHHHh
Confidence 9999999999999999999877 899999998322 2367888999999998753
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.2e-27 Score=187.35 Aligned_cols=212 Identities=14% Similarity=0.063 Sum_probs=144.3
Q ss_pred CCCCeEEEEcCCCCCc--cccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHH-HHHHHhCCCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEG--IVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLA-TGLAKLGVDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~--~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~-~~l~~~~~~~~~lvGh 137 (320)
+.+++|||+||++++. . .|..+++.|...|+|+++|+||||.|... ..+++.+++++. .+++.++.++++|+||
T Consensus 65 ~~~~~lvllhG~~~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~--~~~~~~~a~~~~~~l~~~~~~~~~~LvGh 141 (300)
T 1kez_A 65 PGEVTVICCAGTAAISGPH-EFTRLAGALRGIAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQGDKPFVVAGH 141 (300)
T ss_dssp SCSSEEEECCCSSTTCSTT-TTHHHHHHTSSSCCBCCCCCTTSSTTCCB--CSSHHHHHHHHHHHHHHHCSSCCEEEECC
T ss_pred CCCCeEEEECCCcccCcHH-HHHHHHHhcCCCceEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4689999999999977 7 99999999988899999999999998643 468899999988 4667788889999999
Q ss_pred ChhHHHHHHHHHhCc---cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchh
Q 020916 138 SYGGMVSFKVAELYP---NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL 214 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
|+||.+++.+|.++| ++|+++|++++........ ...+ ...... ........ ..
T Consensus 142 S~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~----~~~~----------------~~~~~~-~~~~~~~~--~~ 198 (300)
T 1kez_A 142 SAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA----MNAW----------------LEELTA-TLFDRETV--RM 198 (300)
T ss_dssp THHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH----HHHH----------------HHHHHG-GGCCCCSS--CC
T ss_pred CHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH----HHHH----------------HHHHHH-HHHhCcCC--cc
Confidence 999999999999988 4899999999865322100 0000 000000 00000000 00
Q ss_pred HHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 215 YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
.......+ ..+...+ .......+++|+++|+|+ |..+++.. ..+.+.++ .+.+++++++ ||+.++
T Consensus 199 ~~~~~~~~-------~~~~~~~----~~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~-~~~~~~~i~g-gH~~~~ 263 (300)
T 1kez_A 199 DDTRLTAL-------GAYDRLT----GQWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWP-FEHDTVAVPG-DHFTMV 263 (300)
T ss_dssp CHHHHHHH-------HHHHHHT----TTCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCS-SCCEEEEESS-CTTTSS
T ss_pred chHHHHHH-------HHHHHHH----hcCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcC-CCCeEEEecC-CChhhc
Confidence 00000000 0011111 111357789999999995 55555433 23444443 3579999999 999996
Q ss_pred -CChHHHHHHHHHHHHhhhh
Q 020916 295 -ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 295 -~~~~~~~~~i~~fl~~~~~ 313 (320)
++|+++++.|.+||++...
T Consensus 264 ~e~~~~~~~~i~~fl~~~~~ 283 (300)
T 1kez_A 264 QEHADAIARHIDAWLGGGNS 283 (300)
T ss_dssp SSCSHHHHHHHHHHHTCC--
T ss_pred cccHHHHHHHHHHHHHhccC
Confidence 8999999999999987654
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=179.87 Aligned_cols=210 Identities=17% Similarity=0.203 Sum_probs=152.3
Q ss_pred CCCceEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecC
Q 020916 20 GVQPHAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 20 ~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d 97 (320)
+++.+.+.+. +|.++.++...+... .++.|+||++||++++.. .|..+++.|++. |.|+++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~p~~~---------------~~~~p~vv~~HG~~g~~~-~~~~~~~~l~~~G~~v~~~d 66 (241)
T 3f67_A 3 AIIAGETSIPSQGENMPAYHARPKNA---------------DGPLPIVIVVQEIFGVHE-HIRDLCRRLAQEGYLAIAPE 66 (241)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTC---------------CSCEEEEEEECCTTCSCH-HHHHHHHHHHHTTCEEEEEC
T ss_pred cceeeeEEEecCCcceEEEEecCCCC---------------CCCCCEEEEEcCcCccCH-HHHHHHHHHHHCCcEEEEec
Confidence 4444444443 788888877665321 134689999999999988 999999999887 9999999
Q ss_pred CCCCCCCCCCCCC-----------CChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEe
Q 020916 98 LLFFGGSITDEAD-----------RSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVS 161 (320)
Q Consensus 98 ~~G~G~s~~~~~~-----------~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 161 (320)
++|+|.+...... .......+|+.++++.+. .++++++|||+||.+++.++.++|+ +.+++++
T Consensus 67 ~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~ 145 (241)
T 3f67_A 67 LYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAW 145 (241)
T ss_dssp TTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEE
T ss_pred ccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEE
Confidence 9999877543322 233456788888888764 4579999999999999999999987 7777766
Q ss_pred cccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCC
Q 020916 162 GSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNK 241 (320)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (320)
.+........ ...... .
T Consensus 146 ~~~~~~~~~~-------------------------------------~~~~~~------------------~-------- 162 (241)
T 3f67_A 146 YGKLVGEKSL-------------------------------------NSPKHP------------------V-------- 162 (241)
T ss_dssp SCCCSCCCCS-------------------------------------SSCCCH------------------H--------
T ss_pred eccccCCCcc-------------------------------------CCccCH------------------H--------
Confidence 5543211000 000000 0
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccC--------ChHHHHHHHHHHHHh
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLE--------RPCAYNRCLKQFLAS 310 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~--------~~~~~~~~i~~fl~~ 310 (320)
..+.++++|+++++|++|.++|.+..+.+.+.+. +.+++++++++++|.+..+ ..+++.+.+.+||++
T Consensus 163 -~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 163 -DIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp -HHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred -HhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0134567899999999999999999888888873 1389999999999988642 236678888888865
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=176.48 Aligned_cols=226 Identities=10% Similarity=0.061 Sum_probs=156.8
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhcc-ceEEecC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~-~~vi~~d 97 (320)
....+...+|.++.++.+.+.... ..++.|+||++||.+ ++.. .|..+++.|.+. |.|+++|
T Consensus 15 ~~~~~~~~~g~~l~~~~~~~~~~~-------------~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d 80 (276)
T 3hxk_A 15 NKSTFSLNDTAWVDFYQLQNPRQN-------------ENYTFPAIIICPGGGYQHISQR-ESDPLALAFLAQGYQVLLLN 80 (276)
T ss_dssp CEEECCCBTTBEEEEECCCC-------------------CCBCEEEEECCSTTTSCCGG-GSHHHHHHHHHTTCEEEEEE
T ss_pred ccccccCCCCeEEEEEEeCCcccc-------------cCCCCCEEEEEcCCccccCCch-hhHHHHHHHHHCCCEEEEec
Confidence 445556668999999887753211 114679999999943 4455 788899999877 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHh---------CCCcEEEEEeChhHHHHHHHHHh-CccccccEEEecccccc
Q 020916 98 LLFFGGSITDEADRSPTFQAQCLATGLAKL---------GVDKCVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAM 167 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---------~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~ 167 (320)
+||+|.|... ........|+.++++.+ +.++++|+|||+||.+++.++.. .+.+++++|+++|....
T Consensus 81 ~~g~g~s~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~ 157 (276)
T 3hxk_A 81 YTVMNKGTNY---NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSF 157 (276)
T ss_dssp CCCTTSCCCS---CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBT
T ss_pred CccCCCcCCC---CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccH
Confidence 9999997632 23344455555555443 34589999999999999999988 78899999999987643
Q ss_pred cccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC
Q 020916 168 TDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN 247 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (320)
....... .... ..+..+. ........+..
T Consensus 158 ~~~~~~~-------~~~~----------------------~~~~~~~----------------------~~~~~~~~~~~ 186 (276)
T 3hxk_A 158 TFGWPSD-------LSHF----------------------NFEIENI----------------------SEYNISEKVTS 186 (276)
T ss_dssp TSSCSSS-------SSSS----------------------CCCCSCC----------------------GGGBTTTTCCT
T ss_pred HhhCCcc-------hhhh----------------------hcCchhh----------------------hhCChhhcccc
Confidence 2210000 0000 0000000 00122234567
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCCh-------------HHHHHHHHHHHHhhh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERP-------------CAYNRCLKQFLASLH 312 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~-------------~~~~~~i~~fl~~~~ 312 (320)
+.+|+++++|++|.++|.+..+.+.+.+. ..++++++++++||.+....+ +++.+.+.+||++..
T Consensus 187 ~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 187 STPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp TSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 78999999999999999999888888875 235699999999998776444 678889999999876
Q ss_pred hcc
Q 020916 313 ADE 315 (320)
Q Consensus 313 ~~~ 315 (320)
.+.
T Consensus 267 ~~~ 269 (276)
T 3hxk_A 267 KNL 269 (276)
T ss_dssp HTT
T ss_pred ccc
Confidence 543
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=181.31 Aligned_cols=173 Identities=21% Similarity=0.228 Sum_probs=132.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEec--CCCCCCCCCCCC----CCCChh---HHHHHHHHHHHHh----
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIP--DLLFFGGSITDE----ADRSPT---FQAQCLATGLAKL---- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~--d~~G~G~s~~~~----~~~~~~---~~~~~l~~~l~~~---- 127 (320)
+++|+||++||++++.. .|..+++.|++.|.|+++ |++|+|.|.... ...... ..++++.++++.+
T Consensus 60 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 138 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN-QFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHY 138 (251)
T ss_dssp TTSCEEEEECCTTCCHH-HHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh-HHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 47899999999999999 999999999888999999 899999876432 112322 2355655555554
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
+.++++|+|||+||.+++.++.++|++++++|++++......
T Consensus 139 ~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-------------------------------------- 180 (251)
T 2r8b_A 139 QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-------------------------------------- 180 (251)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC--------------------------------------
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc--------------------------------------
Confidence 788999999999999999999999999999999998752110
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEE-Eec
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ-GIK 286 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~ 286 (320)
......+++|+++++|++|.+++.+..+.+.+.++..+.++. +++
T Consensus 181 ----------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 226 (251)
T 2r8b_A 181 ----------------------------------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVWH 226 (251)
T ss_dssp ----------------------------------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEEEE
T ss_pred ----------------------------------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 012234678999999999999999999999888862134444 778
Q ss_pred CCCcccccCChHHHHHHHHHHHHh
Q 020916 287 KAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 287 ~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++||.++.+.++. +.+||++
T Consensus 227 ~~gH~~~~~~~~~----~~~~l~~ 246 (251)
T 2r8b_A 227 PGGHEIRSGEIDA----VRGFLAA 246 (251)
T ss_dssp SSCSSCCHHHHHH----HHHHHGG
T ss_pred CCCCccCHHHHHH----HHHHHHH
Confidence 8899987666554 4455544
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=177.94 Aligned_cols=195 Identities=10% Similarity=0.104 Sum_probs=128.3
Q ss_pred CCCCeEEEEcC---CCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-------hC-
Q 020916 61 PSKPVVVLVHG---FAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-------LG- 128 (320)
Q Consensus 61 ~~~~~vv~lhG---~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-------~~- 128 (320)
+..|+||++|| ..++.. .|..+++.|++. |.|+++|+||+|.+.. ......+|+.+.++. ++
T Consensus 33 ~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~ 106 (277)
T 3bxp_A 33 VDYPIMIICPGGGFTYHSGR-EEAPIATRMMAAGMHTVVLNYQLIVGDQS-----VYPWALQQLGATIDWITTQASAHHV 106 (277)
T ss_dssp CCEEEEEEECCSTTTSCCCT-THHHHHHHHHHTTCEEEEEECCCSTTTCC-----CTTHHHHHHHHHHHHHHHHHHHHTE
T ss_pred CCccEEEEECCCccccCCCc-cchHHHHHHHHCCCEEEEEecccCCCCCc-----cCchHHHHHHHHHHHHHhhhhhcCC
Confidence 46789999999 556666 899999999877 9999999999994433 222233333333332 23
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhC--------------ccccccEEEecccccccccccccccccccccccccccCcCcH
Q 020916 129 -VDKCVLVGFSYGGMVSFKVAELY--------------PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSV 193 (320)
Q Consensus 129 -~~~~~lvGhS~Gg~~a~~~a~~~--------------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
.++++|+|||+||.+|+.++.++ +.+++++|++++......... ..
T Consensus 107 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~------------------~~- 167 (277)
T 3bxp_A 107 DCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFP------------------TT- 167 (277)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSSS------------------SS-
T ss_pred ChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCCC------------------Cc-
Confidence 35899999999999999999985 678999999988753211100 00
Q ss_pred HHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHH
Q 020916 194 KGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKE 273 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 273 (320)
..+. ..+.. ..........+..+.+|+|+++|++|.++|++..+.+.+
T Consensus 168 ~~~~----------------------~~~~~----------~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~ 215 (277)
T 3bxp_A 168 SAAR----------------------NQITT----------DARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQ 215 (277)
T ss_dssp HHHH----------------------HHHCS----------CGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHH
T ss_pred cccc----------------------hhccc----------hhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHH
Confidence 0000 00000 000011112345567899999999999999988888887
Q ss_pred HhC--CCCeEEEEecCCCcccccCC---------------hHHHHHHHHHHHHhhh
Q 020916 274 QLG--ADHVTFQGIKKAGHLVHLER---------------PCAYNRCLKQFLASLH 312 (320)
Q Consensus 274 ~~~--~~~~~~~~~~~~gH~~~~~~---------------~~~~~~~i~~fl~~~~ 312 (320)
.++ ..+++++++++++|.+.... ++++.+.+.+||++..
T Consensus 216 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 216 AMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 764 23679999999999655443 4778888999998764
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=181.69 Aligned_cols=210 Identities=13% Similarity=0.104 Sum_probs=152.2
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhcc-ceEEecC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~-~~vi~~d 97 (320)
+...+...+|..+.+..+.+. .+++|+|||+||.+ ++.. .|..+++.|.+. |.|+++|
T Consensus 39 ~~~~i~~~~~~~~~~~~~~p~-----------------~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d 100 (262)
T 2pbl_A 39 ARLNLSYGEGDRHKFDLFLPE-----------------GTPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPS 100 (262)
T ss_dssp EEEEEESSSSTTCEEEEECCS-----------------SSCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEEC
T ss_pred CccccccCCCCCceEEEEccC-----------------CCCCCEEEEEcCcccccCChH-HHHHHHHHHHhCCCEEEEeC
Confidence 344566656655555444331 13688999999954 6666 888999999877 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC---CcEEEEEeChhHHHHHHHHHhC------ccccccEEEeccccccc
Q 020916 98 LLFFGGSITDEADRSPTFQAQCLATGLAKLGV---DKCVLVGFSYGGMVSFKVAELY------PNLVQAMVVSGSILAMT 168 (320)
Q Consensus 98 ~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~~ 168 (320)
+||+|. .+....++|+.++++.+.. ++++|+|||+||.+++.++.++ |++++++|++++.....
T Consensus 101 ~~~~~~-------~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~ 173 (262)
T 2pbl_A 101 YELCPE-------VRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLR 173 (262)
T ss_dssp CCCTTT-------SCHHHHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCG
T ss_pred CCCCCC-------CChHHHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCch
Confidence 999864 3577888898888887754 5899999999999999999888 88999999999865321
Q ss_pred ccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC
Q 020916 169 DSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (320)
.... .. ....+ ..... . ... ......+..+
T Consensus 174 ~~~~------------------~~---~~~~~--------~~~~~--------------~-~~~------~~~~~~~~~~ 203 (262)
T 2pbl_A 174 PLLR------------------TS---MNEKF--------KMDAD--------------A-AIA------ESPVEMQNRY 203 (262)
T ss_dssp GGGG------------------ST---THHHH--------CCCHH--------------H-HHH------TCGGGCCCCC
T ss_pred HHHh------------------hh---hhhhh--------CCCHH--------------H-HHh------cCcccccCCC
Confidence 1000 00 00000 00000 0 000 0011235678
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
++|+++++|++|..++.+..+.+.+.++ +++++++|+||+.+.++++.....+.+++-
T Consensus 204 ~~P~lii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 204 DAKVTVWVGGAERPAFLDQAIWLVEAWD---ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp SCEEEEEEETTSCHHHHHHHHHHHHHHT---CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred CCCEEEEEeCCCCcccHHHHHHHHHHhC---CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 8999999999999999999999999885 899999999999999988888877777663
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-25 Score=182.55 Aligned_cols=266 Identities=11% Similarity=0.043 Sum_probs=157.7
Q ss_pred EEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH-HHHHhhcc-ceEEecCCCCCCC
Q 020916 26 VEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF-QVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 26 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~-~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
+...||.+++++...+... ..+..|+||++||++++.. .|.. +++.|.+. |.|+++|+||+|.
T Consensus 73 ~~~~~g~~~~~~~~~p~~~--------------~~~~~p~vv~~hG~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~ 137 (367)
T 2hdw_A 73 FANRYGITLAADLYLPKNR--------------GGDRLPAIVIGGPFGAVKE-QSSGLYAQTMAERGFVTLAFDPSYTGE 137 (367)
T ss_dssp EECTTSCEEEEEEEEESSC--------------CSSCEEEEEEECCTTCCTT-SHHHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred EecCCCCEEEEEEEeCCCC--------------CCCCCCEEEEECCCCCcch-hhHHHHHHHHHHCCCEEEEECCCCcCC
Confidence 3344677787765543210 0135689999999999888 7875 78888887 9999999999999
Q ss_pred CCCCCCC-CChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 104 SITDEAD-RSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 104 s~~~~~~-~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
|...... ......++|+.++++.+ +.++++++|||+||.+++.++.++| +++++|++++.... ........
T Consensus 138 s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~-~~~~~~~~ 215 (367)
T 2hdw_A 138 SGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMT-RVMSKGYN 215 (367)
T ss_dssp SCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHH-HHHHHTTT
T ss_pred CCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEecccccc-HHHhhhhc
Confidence 9765433 33566778888877776 2457999999999999999999998 69999999864211 00000000
Q ss_pred ccccccccccccCcCcHHHHHHHHhHhhhc---cc---cCCchhHHHHHHHHhcChh-----------hHHHHhhhhhcc
Q 020916 177 NRLGVSSSSELLLPNSVKGLKALLSVATYK---KL---WFPSCLYKDFLEVMFANRK-----------ERAELLEGLLIS 239 (320)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 239 (320)
.............................. .. .............+..... ........+...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (367)
T 2hdw_A 216 DSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNM 295 (367)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTS
T ss_pred cccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCC
Confidence 000000000000000000000000000000 00 0001111122111110000 000011112222
Q ss_pred CCCCCCCCCC-CcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH-HHHHHHHHHHhh
Q 020916 240 NKDPTVPNFP-QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA-YNRCLKQFLASL 311 (320)
Q Consensus 240 ~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~~~i~~fl~~~ 311 (320)
+....+.+++ +|+|+++|++|. +.+..+.+.+... .++++++++++||+.+.+.++. +.+.|.+||++.
T Consensus 296 ~~~~~~~~i~~~PvLii~G~~D~--~~~~~~~~~~~~~-~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~ 366 (367)
T 2hdw_A 296 PILTYIKEISPRPILLIHGERAH--SRYFSETAYAAAA-EPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEH 366 (367)
T ss_dssp CSCTTGGGGTTSCEEEEEETTCT--THHHHHHHHHHSC-SSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHH
T ss_pred ChhHhHHhhcCCceEEEecCCCC--CHHHHHHHHHhCC-CCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhh
Confidence 3345667788 999999999998 7888888877643 4899999999999988777765 689999999763
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=179.33 Aligned_cols=171 Identities=11% Similarity=0.130 Sum_probs=137.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH--------HhCCCcE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA--------KLGVDKC 132 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~--------~~~~~~~ 132 (320)
..|+||++||++++.. .|..+++.|.+. |.|+++|+||+|.|.... .++....+..+.+ .++.+++
T Consensus 95 ~~p~vv~~HG~~~~~~-~~~~~~~~la~~G~~vv~~d~~g~g~s~~~~----~~d~~~~~~~l~~~~~~~~~~~~~~~~v 169 (306)
T 3vis_A 95 TYGAIAISPGYTGTQS-SIAWLGERIASHGFVVIAIDTNTTLDQPDSR----ARQLNAALDYMLTDASSAVRNRIDASRL 169 (306)
T ss_dssp CEEEEEEECCTTCCHH-HHHHHHHHHHTTTEEEEEECCSSTTCCHHHH----HHHHHHHHHHHHHTSCHHHHTTEEEEEE
T ss_pred CCCEEEEeCCCcCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCcchH----HHHHHHHHHHHHhhcchhhhccCCcccE
Confidence 5788999999999999 999999999998 999999999999875311 1111111222222 1234689
Q ss_pred EEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc
Q 020916 133 VLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS 212 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (320)
+++|||+||.+++.++.++|+ ++++|++++...
T Consensus 170 ~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~---------------------------------------------- 202 (306)
T 3vis_A 170 AVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL---------------------------------------------- 202 (306)
T ss_dssp EEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----------------------------------------------
T ss_pred EEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC----------------------------------------------
Confidence 999999999999999999987 999999887431
Q ss_pred hhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHH-HHHHHHHHhCC-CCeEEEEecCCCc
Q 020916 213 CLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE-LAHNMKEQLGA-DHVTFQGIKKAGH 290 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~gH 290 (320)
...+..+++|+++++|++|.+++.+ ..+.+.+.++. ...++++++++||
T Consensus 203 -----------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~gH 253 (306)
T 3vis_A 203 -----------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYLELDGASH 253 (306)
T ss_dssp -----------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEEEETTCCT
T ss_pred -----------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEEEECCCCc
Confidence 1245677899999999999999998 58899998872 1678999999999
Q ss_pred ccccCChHHHHHHHHHHHHhhhh
Q 020916 291 LVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 291 ~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+++.+.++++.+.+.+||++...
T Consensus 254 ~~~~~~~~~~~~~i~~fl~~~l~ 276 (306)
T 3vis_A 254 FAPNITNKTIGMYSVAWLKRFVD 276 (306)
T ss_dssp TGGGSCCHHHHHHHHHHHHHHHS
T ss_pred cchhhchhHHHHHHHHHHHHHcc
Confidence 99999999999999999988643
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=169.56 Aligned_cols=185 Identities=14% Similarity=0.091 Sum_probs=125.7
Q ss_pred CCeEEEEcCCCCCccccHH--HHHHHhhc---cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEe
Q 020916 63 KPVVVLVHGFAAEGIVTWQ--FQVGALTK---KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGF 137 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~--~~~~~l~~---~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGh 137 (320)
.|+||++||++++.. .+. .+.+.+.+ .++|+++|+||||. +..+++..+++....++++|+||
T Consensus 2 mptIl~lHGf~ss~~-s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~-----------~~~~~l~~~~~~~~~~~i~l~G~ 69 (202)
T 4fle_A 2 MSTLLYIHGFNSSPS-SAKATTFKSWLQQHHPHIEMQIPQLPPYPA-----------EAAEMLESIVMDKAGQSIGIVGS 69 (202)
T ss_dssp -CEEEEECCTTCCTT-CHHHHHHHHHHHHHCTTSEEECCCCCSSHH-----------HHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CcEEEEeCCCCCCCC-ccHHHHHHHHHHHcCCCcEEEEeCCCCCHH-----------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 489999999998876 553 34455544 38999999999985 34778888888888899999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
||||.+|+.+|.++|..+..++...++............. .. . .. +......
T Consensus 70 SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~----------------~~---~~~~~~~ 121 (202)
T 4fle_A 70 SLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQN----PY-----T----------------GQ---KYVLESR 121 (202)
T ss_dssp THHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEEC----TT-----T----------------CC---EEEECHH
T ss_pred ChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhcc----cc-----c----------------cc---cccchHH
Confidence 9999999999999998766655444332111100000000 00 0 00 0000000
Q ss_pred HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 218 FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
+.... ........++++|+|+|+|++|.++|.+.+.++. + ++++++++|+||.+ +++
T Consensus 122 ~~~~~----------------~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~--~~~l~i~~g~~H~~--~~~ 178 (202)
T 4fle_A 122 HIYDL----------------KAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY---T--PCRQTVESGGNHAF--VGF 178 (202)
T ss_dssp HHHHH----------------HTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT---T--TSEEEEESSCCTTC--TTG
T ss_pred HHHHH----------------HhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh---h--CCEEEEECCCCcCC--CCH
Confidence 00000 1122345678899999999999999998887654 4 78999999999963 567
Q ss_pred HHHHHHHHHHHHh
Q 020916 298 CAYNRCLKQFLAS 310 (320)
Q Consensus 298 ~~~~~~i~~fl~~ 310 (320)
+++.+.|.+||+-
T Consensus 179 ~~~~~~I~~FL~~ 191 (202)
T 4fle_A 179 DHYFSPIVTFLGL 191 (202)
T ss_dssp GGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHhh
Confidence 7888999999963
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=171.87 Aligned_cols=173 Identities=19% Similarity=0.278 Sum_probs=135.6
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhc--c-ceEEecCCC-------------------CCCCCCCCCCCCChhHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTK--K-YSVYIPDLL-------------------FFGGSITDEADRSPTFQAQ 118 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--~-~~vi~~d~~-------------------G~G~s~~~~~~~~~~~~~~ 118 (320)
+++|+||++||++++.. .|..+++.|.+ . |.|+++|+| |+|.+. .....+..+.++
T Consensus 22 ~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~~~~ 99 (226)
T 3cn9_A 22 NADACIIWLHGLGADRT-DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR-AIDEDQLNASAD 99 (226)
T ss_dssp TCCEEEEEECCTTCCGG-GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT-CBCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCChH-HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc-cccchhHHHHHH
Confidence 57899999999999999 99999999985 4 999997766 566432 223356677788
Q ss_pred HHHHHHHHh---CC--CcEEEEEeChhHHHHHHHHH-hCccccccEEEecccccccccccccccccccccccccccCcCc
Q 020916 119 CLATGLAKL---GV--DKCVLVGFSYGGMVSFKVAE-LYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNS 192 (320)
Q Consensus 119 ~l~~~l~~~---~~--~~~~lvGhS~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
++.++++.+ +. ++++|+|||+||.+++.++. ++|++++++|++++........
T Consensus 100 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~--------------------- 158 (226)
T 3cn9_A 100 QVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL--------------------- 158 (226)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC---------------------
T ss_pred HHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh---------------------
Confidence 899999887 54 58999999999999999999 9999999999999864221100
Q ss_pred HHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHH
Q 020916 193 VKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMK 272 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 272 (320)
......+++|+++++|++|.++|.+..+.+.
T Consensus 159 -------------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~ 189 (226)
T 3cn9_A 159 -------------------------------------------------ALDERHKRIPVLHLHGSQDDVVDPALGRAAH 189 (226)
T ss_dssp -------------------------------------------------CCCTGGGGCCEEEEEETTCSSSCHHHHHHHH
T ss_pred -------------------------------------------------hhcccccCCCEEEEecCCCCccCHHHHHHHH
Confidence 0011456789999999999999999999988
Q ss_pred HHhCC--CCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 273 EQLGA--DHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 273 ~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+.++. .++++++++ +||.++.+.++ .+.+||++
T Consensus 190 ~~l~~~g~~~~~~~~~-~gH~~~~~~~~----~i~~~l~~ 224 (226)
T 3cn9_A 190 DALQAQGVEVGWHDYP-MGHEVSLEEIH----DIGAWLRK 224 (226)
T ss_dssp HHHHHTTCCEEEEEES-CCSSCCHHHHH----HHHHHHHH
T ss_pred HHHHHcCCceeEEEec-CCCCcchhhHH----HHHHHHHh
Confidence 88861 258999999 99998766554 45566654
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-26 Score=169.00 Aligned_cols=180 Identities=13% Similarity=0.201 Sum_probs=133.3
Q ss_pred CCCeEEEEcCCCCCccccHHHHH-HHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQV-GALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~-~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
..|+|||+||++++....|...+ ..|.+. |+|+++|+| .|.. .+.+++++++.++++.+ .++++++|||+
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~----~~~~~~~~~~~~~~~~~-~~~~~l~G~S~ 74 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQ----PRLEDWLDTLSLYQHTL-HENTYLVAHSL 74 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTS----CCHHHHHHHHHTTGGGC-CTTEEEEEETT
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCC----CCHHHHHHHHHHHHHhc-cCCEEEEEeCc
Confidence 34679999999988762466666 468554 999999999 2222 26888999999999988 78999999999
Q ss_pred hHHHHHHHHHhCcc--ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 140 GGMVSFKVAELYPN--LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 140 Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
||.+++.++.++|+ +++++|++++......... . + . . +... +..
T Consensus 75 Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~----------~------------~----~-~-~~~~--~~~---- 120 (192)
T 1uxo_A 75 GCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ----------M------------L----D-E-FTQG--SFD---- 120 (192)
T ss_dssp HHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG----------G------------G----G-G-GTCS--CCC----
T ss_pred cHHHHHHHHHHhcccCCccEEEEeccCCCccccch----------h------------h----h-h-hhhc--CCC----
Confidence 99999999999999 9999999998653221000 0 0 0 0 0000 000
Q ss_pred HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh
Q 020916 218 FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP 297 (320)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 297 (320)
. ..+.++++|+++++|++|.++|.+..+.+.+.+ +.++++++++||+++.+++
T Consensus 121 -----------~-------------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~ 173 (192)
T 1uxo_A 121 -----------H-------------QKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI---DAALYEVQHGGHFLEDEGF 173 (192)
T ss_dssp -----------H-------------HHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT---TCEEEEETTCTTSCGGGTC
T ss_pred -----------H-------------HHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc---CceEEEeCCCcCccccccc
Confidence 0 012345679999999999999999999998887 6789999999999998887
Q ss_pred HH---HHHHHHHHHHh
Q 020916 298 CA---YNRCLKQFLAS 310 (320)
Q Consensus 298 ~~---~~~~i~~fl~~ 310 (320)
++ +.+.|.+|+++
T Consensus 174 ~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 174 TSLPIVYDVLTSYFSK 189 (192)
T ss_dssp SCCHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHH
Confidence 44 46666666654
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=181.52 Aligned_cols=194 Identities=15% Similarity=0.144 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHH-------HHhCC
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGL-------AKLGV 129 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l-------~~~~~ 129 (320)
++.|+||++||.+ ++.. .|..+++.|++. |.|+++|+||+|.+.. .......|+.+++ +.++.
T Consensus 48 ~~~p~vv~lHGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~~ 121 (283)
T 3bjr_A 48 TNLPAIIIVPGGSYTHIPVA-QAESLAMAFAGHGYQAFYLEYTLLTDQQP-----LGLAPVLDLGRAVNLLRQHAAEWHI 121 (283)
T ss_dssp CCEEEEEEECCSTTTCCCHH-HHHHHHHHHHTTTCEEEEEECCCTTTCSS-----CBTHHHHHHHHHHHHHHHSHHHHTE
T ss_pred CCCcEEEEECCCccccCCcc-ccHHHHHHHHhCCcEEEEEeccCCCcccc-----CchhHHHHHHHHHHHHHHHHHHhCC
Confidence 4678999999954 3444 788999999887 9999999999988730 1112233333333 22233
Q ss_pred --CcEEEEEeChhHHHHHHHHHhCccc-------------cccEEEecccccccccccccccccccccccccccCcCcHH
Q 020916 130 --DKCVLVGFSYGGMVSFKVAELYPNL-------------VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVK 194 (320)
Q Consensus 130 --~~~~lvGhS~Gg~~a~~~a~~~p~~-------------v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
++++|+|||+||.+|+.++.++|++ ++++|++++........... .
T Consensus 122 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~------------------~- 182 (283)
T 3bjr_A 122 DPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKD------------------D- 182 (283)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC-----------------------
T ss_pred CcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccccc------------------c-
Confidence 4899999999999999999999976 89999988765321110000 0
Q ss_pred HHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHH
Q 020916 195 GLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQ 274 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 274 (320)
..+ ...+. ..........+..+.+|+++++|++|.++|++..+.+.+.
T Consensus 183 ---~~~------~~~~~-----------------------~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~ 230 (283)
T 3bjr_A 183 ---ATL------ATWTP-----------------------TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATA 230 (283)
T ss_dssp -------------CCCC-----------------------CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHH
T ss_pred ---chH------HHHHH-----------------------HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHH
Confidence 000 00000 0000111123567789999999999999999888888887
Q ss_pred hC--CCCeEEEEecCCCcccccCCh-------------HHHHHHHHHHHHhh
Q 020916 275 LG--ADHVTFQGIKKAGHLVHLERP-------------CAYNRCLKQFLASL 311 (320)
Q Consensus 275 ~~--~~~~~~~~~~~~gH~~~~~~~-------------~~~~~~i~~fl~~~ 311 (320)
++ +.++++++++++||.+..+.+ +++.+.+.+||++.
T Consensus 231 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 231 LATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 75 235799999999997776554 67888999999753
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=171.56 Aligned_cols=176 Identities=18% Similarity=0.212 Sum_probs=136.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhc--c-ceEEecCCC-------------------CCCCCCCCCCCCChhHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTK--K-YSVYIPDLL-------------------FFGGSITDEADRSPTFQAQ 118 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--~-~~vi~~d~~-------------------G~G~s~~~~~~~~~~~~~~ 118 (320)
+++|+||++||++++.. .|..+++.|.+ . |.|+++|+| |+|.+. .....+.++.++
T Consensus 12 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~~~~ 89 (218)
T 1auo_A 12 PADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR-SISLEELEVSAK 89 (218)
T ss_dssp CCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC-EECHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh-hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc-ccchHHHHHHHH
Confidence 47889999999999999 99999999996 5 999998766 444332 112345667788
Q ss_pred HHHHHHHHh---CC--CcEEEEEeChhHHHHHHHHH-hCccccccEEEecccccccccccccccccccccccccccCcCc
Q 020916 119 CLATGLAKL---GV--DKCVLVGFSYGGMVSFKVAE-LYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNS 192 (320)
Q Consensus 119 ~l~~~l~~~---~~--~~~~lvGhS~Gg~~a~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (320)
++.++++.+ +. ++++++|||+||.+++.++. ++|++++++|++++.... . ..
T Consensus 90 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~-~-------------~~-------- 147 (218)
T 1auo_A 90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT-F-------------GD-------- 147 (218)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT-C-------------CT--------
T ss_pred HHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC-c-------------hh--------
Confidence 888888887 44 48999999999999999999 999999999999986532 0 00
Q ss_pred HHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHH
Q 020916 193 VKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMK 272 (320)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 272 (320)
+.. .....+++|+++++|++|.+++.+..+.+.
T Consensus 148 ------------------~~~-----------------------------~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 180 (218)
T 1auo_A 148 ------------------ELE-----------------------------LSASQQRIPALCLHGQYDDVVQNAMGRSAF 180 (218)
T ss_dssp ------------------TCC-----------------------------CCHHHHTCCEEEEEETTCSSSCHHHHHHHH
T ss_pred ------------------hhh-----------------------------hhhcccCCCEEEEEeCCCceecHHHHHHHH
Confidence 000 001345789999999999999999999999
Q ss_pred HHhCC--CCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 273 EQLGA--DHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 273 ~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
+.++. .++++++++ +||.++.+.++++.+.+.++|
T Consensus 181 ~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 181 EHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp HHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 88871 158999999 999998777666665555554
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-25 Score=178.36 Aligned_cols=219 Identities=18% Similarity=0.083 Sum_probs=136.6
Q ss_pred CCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC--CcEEE
Q 020916 62 SKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV--DKCVL 134 (320)
Q Consensus 62 ~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~l 134 (320)
+.|+||++||++ ++.. .|..+++.|++. +.|+++|+||+|.+..+....+....++++.+.++.++. ++++|
T Consensus 72 ~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l 150 (311)
T 2c7b_A 72 GLPAVLYYHGGGFVFGSIE-THDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGVDPDRIAV 150 (311)
T ss_dssp SEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CCcEEEEECCCcccCCChh-hhHHHHHHHHHhcCCEEEEecCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCchhEEE
Confidence 458999999998 7888 899999999873 999999999999986543222333344445555555565 57999
Q ss_pred EEeChhHHHHHHHHHhCcc----ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 135 VGFSYGGMVSFKVAELYPN----LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+|||+||.+++.++.++|+ +++++|+++|........... .... . .......
T Consensus 151 ~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~---------------------~~~~-~--~~~~~~~ 206 (311)
T 2c7b_A 151 AGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTAS---------------------LVEF-G--VAETTSL 206 (311)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHH---------------------HHHH-H--HCTTCSS
T ss_pred EecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccC---------------------CccH-H--HhccCCC
Confidence 9999999999999988876 499999999876421100000 0000 0 0000011
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHH--HHHHHHhCCCCeEEEEecCC
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELA--HNMKEQLGADHVTFQGIKKA 288 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 288 (320)
.......+...+............ ......+..+. |+++++|++|++++.... +.+.+.. .++++++++|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~l~~~~-P~lii~G~~D~~~~~~~~~~~~l~~~g--~~~~~~~~~g~ 279 (311)
T 2c7b_A 207 PIELMVWFGRQYLKRPEEAYDFKA----SPLLADLGGLP-PALVVTAEYDPLRDEGELYAYKMKASG--SRAVAVRFAGM 279 (311)
T ss_dssp CHHHHHHHHHHHCSSTTGGGSTTT----CGGGSCCTTCC-CEEEEEETTCTTHHHHHHHHHHHHHTT--CCEEEEEETTC
T ss_pred CHHHHHHHHHHhCCCCccccCccc----CcccccccCCC-cceEEEcCCCCchHHHHHHHHHHHHCC--CCEEEEEeCCC
Confidence 112222222222211111000000 00011334444 999999999999864322 3333333 37899999999
Q ss_pred Ccccc-----cCChHHHHHHHHHHHHhhh
Q 020916 289 GHLVH-----LERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 289 gH~~~-----~~~~~~~~~~i~~fl~~~~ 312 (320)
+|.+. .+.++++.+.+.+||++..
T Consensus 280 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (311)
T 2c7b_A 280 VHGFVSFYPFVDAGREALDLAAASIRSGL 308 (311)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHh
Confidence 99876 3456889999999998764
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-25 Score=177.63 Aligned_cols=212 Identities=13% Similarity=0.022 Sum_probs=136.5
Q ss_pred CCCCeEEEEcCCCCC-ccccHHHHHHHhhccceEEecCCCCCCCCCCCCC------------------CCChhHHHHHHH
Q 020916 61 PSKPVVVLVHGFAAE-GIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEA------------------DRSPTFQAQCLA 121 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~-~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~------------------~~~~~~~~~~l~ 121 (320)
++.|+||++||++++ .. .|..........|.|+++|+||+|.|..... .+.....++|+.
T Consensus 80 ~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 158 (318)
T 1l7a_A 80 GPHPAIVKYHGYNASYDG-EIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAV 158 (318)
T ss_dssp SCEEEEEEECCTTCCSGG-GHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHH
T ss_pred CCccEEEEEcCCCCCCCC-CcccccchhhCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHH
Confidence 366899999999998 77 7877764444449999999999999975521 112345677777
Q ss_pred HHHHHhC------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHH
Q 020916 122 TGLAKLG------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKG 195 (320)
Q Consensus 122 ~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
++++.+. .++++++|||+||.+++.++..+|+ +.++|+++|......... .... ......
T Consensus 159 ~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~~-------~~~~------~~~~~~ 224 (318)
T 1l7a_A 159 RALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERAI-------DVAL------EQPYLE 224 (318)
T ss_dssp HHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHHH-------HHCC------STTTTH
T ss_pred HHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHHH-------hcCC------cCccHH
Confidence 7777662 2679999999999999999999876 888888766432110000 0000 000000
Q ss_pred HHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHh
Q 020916 196 LKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL 275 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 275 (320)
...++.... ........ ...+...+....+..+++|+++++|++|.++|++....+.+.+
T Consensus 225 ~~~~~~~~~------~~~~~~~~--------------~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l 284 (318)
T 1l7a_A 225 INSFFRRNG------SPETEVQA--------------MKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHL 284 (318)
T ss_dssp HHHHHHHSC------CHHHHHHH--------------HHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred HHHHHhccC------CcccHHHH--------------HHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhc
Confidence 111111000 00000011 1111101111124556799999999999999999999999998
Q ss_pred CCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 276 GADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 276 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
+ ..+++++++++||.. ..++.+.+.+||++..
T Consensus 285 ~-~~~~~~~~~~~~H~~----~~~~~~~~~~fl~~~l 316 (318)
T 1l7a_A 285 E-TKKELKVYRYFGHEY----IPAFQTEKLAFFKQIL 316 (318)
T ss_dssp C-SSEEEEEETTCCSSC----CHHHHHHHHHHHHHHH
T ss_pred C-CCeeEEEccCCCCCC----cchhHHHHHHHHHHHh
Confidence 7 358999999999993 3456778888887653
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=165.34 Aligned_cols=172 Identities=15% Similarity=0.138 Sum_probs=128.2
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecC-------------CCCCCCCCCCCC-CCChhHHHHHHHHHHH-
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPD-------------LLFFGGSITDEA-DRSPTFQAQCLATGLA- 125 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d-------------~~G~G~s~~~~~-~~~~~~~~~~l~~~l~- 125 (320)
++.| ||++||++++.. .|..+++.|...+.|+++| ++|+|.+..... .......++++.++++
T Consensus 15 ~~~p-vv~lHG~g~~~~-~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDEH-QLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSL 92 (209)
T ss_dssp TSCC-EEEECCTTCCTT-TTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred CCCC-EEEEeCCCCCHH-HHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 4567 999999999999 9999999999779999999 777776543221 1233334455555554
Q ss_pred ---HhCC--CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHH
Q 020916 126 ---KLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALL 200 (320)
Q Consensus 126 ---~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (320)
..++ ++++|+|||+||.+++.++.++|++++++|++++......
T Consensus 93 ~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------- 141 (209)
T 3og9_A 93 LAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------------------- 141 (209)
T ss_dssp HHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-------------------------------
T ss_pred HHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-------------------------------
Confidence 3454 7899999999999999999999999999999987542100
Q ss_pred hHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CC
Q 020916 201 SVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--AD 278 (320)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~ 278 (320)
.......++|+++++|++|+++|.+..+.+.+.+. ..
T Consensus 142 -----------------------------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~ 180 (209)
T 3og9_A 142 -----------------------------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGC 180 (209)
T ss_dssp -----------------------------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTC
T ss_pred -----------------------------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCC
Confidence 00123457899999999999999999888887775 22
Q ss_pred CeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 279 HVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 279 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
.+++++++ +||.+. .+..+.+.+||++.
T Consensus 181 ~~~~~~~~-~gH~~~----~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 181 QLEIYESS-LGHQLT----QEEVLAAKKWLTET 208 (209)
T ss_dssp EEEEEECS-STTSCC----HHHHHHHHHHHHHH
T ss_pred ceEEEEcC-CCCcCC----HHHHHHHHHHHHhh
Confidence 46778887 699874 33456777888764
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=195.39 Aligned_cols=235 Identities=17% Similarity=0.228 Sum_probs=158.2
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCC--ccccHHHHHHHhhcc-ceEEec
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAE--GIVTWQFQVGALTKK-YSVYIP 96 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~--~~~~~~~~~~~l~~~-~~vi~~ 96 (320)
..+...+...+|.+++++...++.. .++.|+||++||.+.+ .. .|..+++.|++. |.|+++
T Consensus 332 ~~~~~~~~~~~g~~i~~~~~~p~~~---------------~~~~p~vv~~HG~~~~~~~~-~~~~~~~~l~~~G~~v~~~ 395 (582)
T 3o4h_A 332 GSRLVWVESFDGSRVPTYVLESGRA---------------PTPGPTVVLVHGGPFAEDSD-SWDTFAASLAAAGFHVVMP 395 (582)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTS---------------CSSEEEEEEECSSSSCCCCS-SCCHHHHHHHHTTCEEEEE
T ss_pred cceEEEEECCCCCEEEEEEEcCCCC---------------CCCCcEEEEECCCccccccc-ccCHHHHHHHhCCCEEEEe
Confidence 3445556666888999887765321 1367899999998766 55 788899999888 999999
Q ss_pred CCCC---CCCCCCCCC-CCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccc
Q 020916 97 DLLF---FGGSITDEA-DRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168 (320)
Q Consensus 97 d~~G---~G~s~~~~~-~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 168 (320)
|+|| +|.+..... ........+|+.++++.+ ..++++|+|||+||.+++.++.++|++++++|++++.....
T Consensus 396 d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~ 475 (582)
T 3o4h_A 396 NYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWE 475 (582)
T ss_dssp CCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHH
T ss_pred ccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHH
Confidence 9999 666532111 111123344555554444 33489999999999999999999999999999998854211
Q ss_pred ccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC
Q 020916 169 DSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (320)
.... . .......+.+..+.... . .+........+.++
T Consensus 476 ~~~~------------------~-------------------~~~~~~~~~~~~~~~~~---~---~~~~~sp~~~~~~i 512 (582)
T 3o4h_A 476 EMYE------------------L-------------------SDAAFRNFIEQLTGGSR---E---IMRSRSPINHVDRI 512 (582)
T ss_dssp HHHH------------------T-------------------CCHHHHHHHHHHTTTCH---H---HHHHTCGGGGGGGC
T ss_pred HHhh------------------c-------------------ccchhHHHHHHHcCcCH---H---HHHhcCHHHHHhcC
Confidence 0000 0 00000001111110000 0 00001111235567
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccc-cCChHHHHHHHHHHHHhhhh
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVH-LERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~~ 313 (320)
++|+|+++|++|..+|++..+.+.+.++ +.++++++++++||.++ .++++++.+.+.+||++...
T Consensus 513 ~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 513 KEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp CSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999988886 23589999999999987 56788999999999987643
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=177.03 Aligned_cols=228 Identities=12% Similarity=0.014 Sum_probs=142.7
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE 108 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~ 108 (320)
.||.++.++...+... .++.|+||++||++++.. .+..........|.|+++|+||+|.|....
T Consensus 76 ~dg~~i~~~~~~P~~~---------------~~~~p~vv~~HG~g~~~~-~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~ 139 (337)
T 1vlq_A 76 YRGQRIKGWLLVPKLE---------------EEKLPCVVQYIGYNGGRG-FPHDWLFWPSMGYICFVMDTRGQGSGWLKG 139 (337)
T ss_dssp GGGCEEEEEEEEECCS---------------CSSEEEEEECCCTTCCCC-CGGGGCHHHHTTCEEEEECCTTCCCSSSCC
T ss_pred CCCCEEEEEEEecCCC---------------CCCccEEEEEcCCCCCCC-CchhhcchhhCCCEEEEecCCCCCCcccCC
Confidence 3677777766544210 235689999999998866 554333333344999999999999764321
Q ss_pred ---C----------------------CCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCcccccc
Q 020916 109 ---A----------------------DRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQA 157 (320)
Q Consensus 109 ---~----------------------~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 157 (320)
. .+......+|+.++++.+ +.++++++|||+||.+++.+|..+| ++++
T Consensus 140 ~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~ 218 (337)
T 1vlq_A 140 DTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKA 218 (337)
T ss_dssp CCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCE
T ss_pred CCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccE
Confidence 0 112336678888888777 2358999999999999999999998 5999
Q ss_pred EEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhh
Q 020916 158 MVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL 237 (320)
Q Consensus 158 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (320)
+|+.++......... ... .......+...+... + ......... +.
T Consensus 219 ~vl~~p~~~~~~~~~-------~~~------~~~~~~~~~~~~~~~-------~-~~~~~~~~~--------------~~ 263 (337)
T 1vlq_A 219 LLCDVPFLCHFRRAV-------QLV------DTHPYAEITNFLKTH-------R-DKEEIVFRT--------------LS 263 (337)
T ss_dssp EEEESCCSCCHHHHH-------HHC------CCTTHHHHHHHHHHC-------T-TCHHHHHHH--------------HH
T ss_pred EEECCCcccCHHHHH-------hcC------CCcchHHHHHHHHhC-------c-hhHHHHHHh--------------hh
Confidence 998887543211000 000 000000111111000 0 011111111 10
Q ss_pred ccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 238 ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 238 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
..+....+.++++|+|+++|++|.++|++....+.+.++ .++++++++++||... .++..+.+.+||.+..
T Consensus 264 ~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~-~~~~~~~~~~~gH~~~---~~~~~~~~~~fl~~~l 334 (337)
T 1vlq_A 264 YFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYA-GPKEIRIYPYNNHEGG---GSFQAVEQVKFLKKLF 334 (337)
T ss_dssp TTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCC-SSEEEEEETTCCTTTT---HHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcC-CCcEEEEcCCCCCCCc---chhhHHHHHHHHHHHH
Confidence 011111235678999999999999999999999999997 4589999999999963 2345667777776643
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-24 Score=170.76 Aligned_cols=204 Identities=11% Similarity=0.126 Sum_probs=137.6
Q ss_pred CCCCeEEEEcCCC-----CCccccHHHHHHHh----hcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCC
Q 020916 61 PSKPVVVLVHGFA-----AEGIVTWQFQVGAL----TKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~-----~~~~~~~~~~~~~l----~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~ 130 (320)
+.+|+||++||.+ ++.. .|..+++.| .+. |.|+++|+|+.+.+.. ....++..+.+..+++.++.+
T Consensus 39 ~~~p~vv~lHGgg~~~g~~~~~-~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~---~~~~~d~~~~~~~l~~~~~~~ 114 (273)
T 1vkh_A 39 NTREAVIYIHGGAWNDPENTPN-DFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKGLT 114 (273)
T ss_dssp TCCEEEEEECCSTTTCTTCCGG-GGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHTCC
T ss_pred CCCeEEEEECCCcccCCcCChH-HHHHHHHHHhhhhccCCcEEEEeecccCCCCCC---CcHHHHHHHHHHHHHHhCCcC
Confidence 4688999999965 3555 899999999 344 9999999998765432 234556666677777777888
Q ss_pred cEEEEEeChhHHHHHHHHHhC-----------------ccccccEEEecccccccccccccccccccccccccccCcCcH
Q 020916 131 KCVLVGFSYGGMVSFKVAELY-----------------PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSV 193 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~-----------------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
+++|+|||+||.+|+.++.++ |++++++|++++........... .
T Consensus 115 ~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~---------------~--- 176 (273)
T 1vkh_A 115 NINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEY---------------P--- 176 (273)
T ss_dssp CEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHC---------------G---
T ss_pred cEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhc---------------c---
Confidence 999999999999999999886 78899999998764321110000 0
Q ss_pred HHHHHHHhHhh-hccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHH
Q 020916 194 KGLKALLSVAT-YKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMK 272 (320)
Q Consensus 194 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 272 (320)
....+..... ......... ... ....... ..+.+++|+++++|++|.++|.+..+.+.
T Consensus 177 -~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~--------~~~~~~~P~lii~G~~D~~vp~~~~~~~~ 235 (273)
T 1vkh_A 177 -EYDCFTRLAFPDGIQMYEEE-PSR-----------VMPYVKK--------ALSRFSIDMHLVHSYSDELLTLRQTNCLI 235 (273)
T ss_dssp -GGHHHHHHHCTTCGGGCCCC-HHH-----------HHHHHHH--------HHHHHTCEEEEEEETTCSSCCTHHHHHHH
T ss_pred -cHHHHHHHHhcccccchhhc-ccc-----------cChhhhh--------cccccCCCEEEEecCCcCCCChHHHHHHH
Confidence 0000111000 000000000 000 0000000 01126789999999999999999998888
Q ss_pred HHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHH
Q 020916 273 EQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 273 ~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 308 (320)
+.++ +.++++++++++||..++++ +++.+.|.+||
T Consensus 236 ~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 236 SCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred HHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 8775 23589999999999999888 88999998886
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=175.56 Aligned_cols=214 Identities=14% Similarity=0.130 Sum_probs=135.4
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhc-c-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCC--cEE
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTK-K-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVD--KCV 133 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~-~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~ 133 (320)
++.|+||++||++ ++.. .|..+++.|+. . +.|+++|+||+|.+..+....+....++++.+.++.++.+ +++
T Consensus 77 ~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~ 155 (311)
T 1jji_A 77 PDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIF 155 (311)
T ss_dssp SSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEE
T ss_pred CCceEEEEECCcccccCChh-HhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhHHHhCCCchhEE
Confidence 3678999999998 7777 89999999984 3 9999999999999875543233444455555656666655 899
Q ss_pred EEEeChhHHHHHHHHHhCccc----cccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 134 LVGFSYGGMVSFKVAELYPNL----VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
|+|||+||.+|+.++.+++++ ++++|+++|.......... . ... . ....
T Consensus 156 l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~-~-~~~-----~--------------------~~~~ 208 (311)
T 1jji_A 156 VGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPS-L-LEF-----G--------------------EGLW 208 (311)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHH-H-HHT-----S--------------------SSCS
T ss_pred EEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCcc-H-HHh-----c--------------------CCCc
Confidence 999999999999999988776 9999999987643221100 0 000 0 0000
Q ss_pred -CCchhHHHHHHHHhcChhhHHH-HhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHH--HHHHHHHHhCCCCeEEEEe
Q 020916 210 -FPSCLYKDFLEVMFANRKERAE-LLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE--LAHNMKEQLGADHVTFQGI 285 (320)
Q Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~ 285 (320)
........+...+......... ....+. ..+..+ .|+++++|++|.+++.. ..+.+.+... +++++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~l~~~-~P~li~~G~~D~l~~~~~~~~~~l~~~g~--~~~~~~~ 280 (311)
T 1jji_A 209 ILDQKIMSWFSEQYFSREEDKFNPLASVIF-----ADLENL-PPALIITAEYDPLRDEGEVFGQMLRRAGV--EASIVRY 280 (311)
T ss_dssp SCCHHHHHHHHHHHCSSGGGGGCTTTSGGG-----SCCTTC-CCEEEEEEEECTTHHHHHHHHHHHHHTTC--CEEEEEE
T ss_pred cCCHHHHHHHHHHhCCCCccCCCcccCccc-----ccccCC-ChheEEEcCcCcchHHHHHHHHHHHHcCC--CEEEEEE
Confidence 1111112222222211110000 001110 123333 49999999999987522 2233333333 7999999
Q ss_pred cCCCcccccC-----ChHHHHHHHHHHHHh
Q 020916 286 KKAGHLVHLE-----RPCAYNRCLKQFLAS 310 (320)
Q Consensus 286 ~~~gH~~~~~-----~~~~~~~~i~~fl~~ 310 (320)
+|++|.+... ..+++.+.+.+||++
T Consensus 281 ~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 281 RGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9999987653 347788888888864
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.92 E-value=8.2e-24 Score=171.06 Aligned_cols=213 Identities=13% Similarity=0.030 Sum_probs=132.7
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhc--cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCc
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTK--KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDK 131 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~ 131 (320)
+..|+||++||.+ ++.. .|..+++.|++ .+.|+++|+||+|.+..+. ..++..+.+..+.+.. +.++
T Consensus 88 ~~~p~vv~~HGGg~~~g~~~-~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~---~~~d~~~~~~~l~~~~~~lgd~~~ 163 (323)
T 3ain_A 88 GPYGVLVYYHGGGFVLGDIE-SYDPLCRAITNSCQCVTISVDYRLAPENKFPA---AVVDSFDALKWVYNNSEKFNGKYG 163 (323)
T ss_dssp SCCCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH---HHHHHHHHHHHHHHTGGGGTCTTC
T ss_pred CCCcEEEEECCCccccCChH-HHHHHHHHHHHhcCCEEEEecCCCCCCCCCcc---hHHHHHHHHHHHHHhHHHhCCCce
Confidence 4678999999944 6777 89999999986 4999999999999875432 2223333333333332 4678
Q ss_pred EEEEEeChhHHHHHHHHHhCcccc---ccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLV---QAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL 208 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v---~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (320)
++|+|||+||.+|+.++.++|+++ +++|+++|.......... .... ....
T Consensus 164 i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~----------------------~~~~-----~~~~ 216 (323)
T 3ain_A 164 IAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKS----------------------LYDN-----GEGF 216 (323)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHH----------------------HHHH-----SSSS
T ss_pred EEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCcc----------------------HHHh-----ccCC
Confidence 999999999999999999988876 889998886532211000 0000 0001
Q ss_pred cCCchhHHHHHHHHhcChhhHHH-HhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe
Q 020916 209 WFPSCLYKDFLEVMFANRKERAE-LLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI 285 (320)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~ 285 (320)
.........+...+......... ....+. ..+..+ .|+++++|++|.+++ ....+.+.+. ..+++++++
T Consensus 217 ~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~-----~~l~~l-~P~lii~G~~D~l~~--~~~~~a~~l~~ag~~~~~~~~ 288 (323)
T 3ain_A 217 FLTREHIDWFGQQYLRSFADLLDFRFSPIL-----ADLNDL-PPALIITAEHDPLRD--QGEAYANKLLQSGVQVTSVGF 288 (323)
T ss_dssp SSCHHHHHHHHHHHCSSGGGGGCTTTCGGG-----SCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCHHHHHHHHHHhCCCCcccCCcccCccc-----CcccCC-CHHHEEECCCCccHH--HHHHHHHHHHHcCCCEEEEEE
Confidence 11112222222222211111000 001110 123333 399999999999873 3344444443 237899999
Q ss_pred cCCCccccc-----CChHHHHHHHHHHHHhhh
Q 020916 286 KKAGHLVHL-----ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 286 ~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 312 (320)
+|++|.++. +.++++.+.+.+||++..
T Consensus 289 ~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 289 NNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp TTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 999999876 345889999999998754
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-24 Score=171.64 Aligned_cols=214 Identities=11% Similarity=0.063 Sum_probs=132.8
Q ss_pred CCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 62 SKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 62 ~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
++|+||++||.+ ++.. .|..++..|... |.|+++|+||.+... .....++..+.+..+++.++.++++|+|
T Consensus 95 ~~p~vv~lHGgg~~~~~~~-~~~~~~~~la~~~g~~vi~~D~r~~~~~~---~~~~~~d~~~~~~~l~~~~~~~~i~l~G 170 (326)
T 3d7r_A 95 IDKKILYIHGGFNALQPSP-FHWRLLDKITLSTLYEVVLPIYPKTPEFH---IDDTFQAIQRVYDQLVSEVGHQNVVVMG 170 (326)
T ss_dssp CSSEEEEECCSTTTSCCCH-HHHHHHHHHHHHHCSEEEEECCCCTTTSC---HHHHHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred CCeEEEEECCCcccCCCCH-HHHHHHHHHHHHhCCEEEEEeCCCCCCCC---chHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 678999999955 4566 788888888743 999999999865432 1123455566666667777888999999
Q ss_pred eChhHHHHHHHHHhCccc----cccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc
Q 020916 137 FSYGGMVSFKVAELYPNL----VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS 212 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (320)
||+||.+|+.+|.++|++ ++++|++++........... .... . ........
T Consensus 171 ~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~-~~~~-----------------~-------~~~~~~~~ 225 (326)
T 3d7r_A 171 DGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDI-SDAL-----------------I-------EQDAVLSQ 225 (326)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTC-CHHH-----------------H-------HHCSSCCH
T ss_pred ECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhH-Hhhh-----------------c-------ccCcccCH
Confidence 999999999999998877 99999999875432111000 0000 0 00000111
Q ss_pred hhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCc
Q 020916 213 CLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGH 290 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH 290 (320)
.....+...+.............+. ..+..+ +|+|+++|++|..++ ....+.+.+. ..++++++++|++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~P~lii~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~g~~H 297 (326)
T 3d7r_A 226 FGVNEIMKKWANGLPLTDKRISPIN-----GTIEGL-PPVYMFGGGREMTHP--DMKLFEQMMLQHHQYIEFYDYPKMVH 297 (326)
T ss_dssp HHHHHHHHHHHTTSCTTSTTTSGGG-----SCCTTC-CCEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEETTCCT
T ss_pred HHHHHHHHHhcCCCCCCCCeECccc-----CCcccC-CCEEEEEeCcccchH--HHHHHHHHHHHCCCcEEEEEeCCCcc
Confidence 1111111111100000000000000 112222 599999999997543 3333333332 13789999999999
Q ss_pred cccc---CChHHHHHHHHHHHHhhh
Q 020916 291 LVHL---ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 291 ~~~~---~~~~~~~~~i~~fl~~~~ 312 (320)
.++. ++++++.+.|.+||++..
T Consensus 298 ~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 298 DFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp TGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred cccccCCHHHHHHHHHHHHHHHHHh
Confidence 9887 788999999999997654
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=180.48 Aligned_cols=222 Identities=12% Similarity=0.116 Sum_probs=138.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh--CCCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL--GVDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~lvGh 137 (320)
++.|+||++||++++.. ..++..|++. |.|+++|++|+|.+.........++..+.+..+.+.. +.++++|+||
T Consensus 156 ~~~P~Vv~~hG~~~~~~---~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~ 232 (422)
T 3k2i_A 156 GPFPGIIDIFGIGGGLL---EYRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGI 232 (422)
T ss_dssp CCBCEEEEECCTTCSCC---CHHHHHHHTTTCEEEEEECSSSTTSCSSCSCEETHHHHHHHHHHHTSTTBCCSSEEEEEE
T ss_pred CCcCEEEEEcCCCcchh---HHHHHHHHhCCCEEEEEccCCCCCCCCCcccCCHHHHHHHHHHHHhCcCcCCCCEEEEEE
Confidence 46789999999987644 3457888877 9999999999998876555555556555555544443 3478999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
|+||.+|+.+|.++|+ ++++|++++.......... .......... ..... ........ ...
T Consensus 233 S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~-------~~~~~~~~-~~~--- 293 (422)
T 3k2i_A 233 SLGADICLSMASFLKN-VSATVSINGSGISGNTAIN--YKHSSIPPLG-----YDLRR-------IKVAFSGL-VDI--- 293 (422)
T ss_dssp THHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEE--ETTEEECCCC-----BCGGG-------CEECTTSC-EEC---
T ss_pred CHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchh--hcCCcCCCcc-----cchhh-------cccCcchh-HHH---
Confidence 9999999999999998 9999998877532211100 0000000000 00000 00000000 000
Q ss_pred HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHH-HHHHHHhC---CCCeEEEEecCCCccc-
Q 020916 218 FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELA-HNMKEQLG---ADHVTFQGIKKAGHLV- 292 (320)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~gH~~- 292 (320)
...+.... . .........+.++++|+|+|+|++|.++|.+.. +.+.+.+. ..++++++++|+||.+
T Consensus 294 --~~~~~~~~------~-~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~ 364 (422)
T 3k2i_A 294 --VDIRNALV------G-GYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIE 364 (422)
T ss_dssp --TTCBCCCT------T-GGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCC
T ss_pred --HHHHhhhh------h-cccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEEC
Confidence 00000000 0 000111234567899999999999999998854 45665553 1238999999999997
Q ss_pred ---------------------------ccCChHHHHHHHHHHHHhhhh
Q 020916 293 ---------------------------HLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 293 ---------------------------~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+.+.++++.+.|.+||++...
T Consensus 365 ~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~ 412 (422)
T 3k2i_A 365 PPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLG 412 (422)
T ss_dssp STTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 224577899999999988754
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-23 Score=164.31 Aligned_cols=170 Identities=16% Similarity=0.090 Sum_probs=130.2
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH--------HhCCCcE
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA--------KLGVDKC 132 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~--------~~~~~~~ 132 (320)
..|+|||+||++++.. .|..+++.|.+. |.|+++|+||.+. ........+.+.+... .++.+++
T Consensus 48 ~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~s~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 120 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPS-TYAGLLSHWASHGFVVAAAETSNAGT------GREMLACLDYLVRENDTPYGTYSGKLNTGRV 120 (258)
T ss_dssp CEEEEEEECCTTCCGG-GGHHHHHHHHHHTCEEEEECCSCCTT------SHHHHHHHHHHHHHHHSSSSTTTTTEEEEEE
T ss_pred CceEEEEECCCCCCch-hHHHHHHHHHhCCeEEEEecCCCCcc------HHHHHHHHHHHHhcccccccccccccCccce
Confidence 5689999999999988 999999999887 9999999996311 1122223333433332 3345689
Q ss_pred EEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc
Q 020916 133 VLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS 212 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (320)
+++||||||.+++.++ .++++++++++++..... +
T Consensus 121 ~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~------------------------------------------~- 155 (258)
T 2fx5_A 121 GTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL------------------------------------------G- 155 (258)
T ss_dssp EEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST------------------------------------------T-
T ss_pred EEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc------------------------------------------c-
Confidence 9999999999999998 456899999988643100 0
Q ss_pred hhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhCCCCeEEEEecCCCcc
Q 020916 213 CLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
.....+..+++|+|+|+|++|.+++.+. .+.+.+... .++++++++++||+
T Consensus 156 ---------------------------~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~H~ 207 (258)
T 2fx5_A 156 ---------------------------HDSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRAN-VPVFWGERRYVSHF 207 (258)
T ss_dssp ---------------------------CCGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCS-SCEEEEEESSCCTT
T ss_pred ---------------------------cchhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccC-CCeEEEEECCCCCc
Confidence 0001245678999999999999999986 777777742 46999999999999
Q ss_pred cccCChHHHHHHHHHHHHhh
Q 020916 292 VHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~~~ 311 (320)
.+.++++++.+.|.+||++.
T Consensus 208 ~~~~~~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 208 EPVGSGGAYRGPSTAWFRFQ 227 (258)
T ss_dssp SSTTTCGGGHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHH
Confidence 99999999999999999854
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-24 Score=174.58 Aligned_cols=216 Identities=16% Similarity=0.160 Sum_probs=127.3
Q ss_pred CCCCeEEEEcCCCCC---cc-ccHHHHHHHhh-cc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-------
Q 020916 61 PSKPVVVLVHGFAAE---GI-VTWQFQVGALT-KK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~---~~-~~~~~~~~~l~-~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------- 127 (320)
+..|+||++||++.. .. ..|..++..|+ +. +.|+++|+||++.+.. ....+|+.++++.+
T Consensus 81 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~-------~~~~~d~~~~~~~l~~~~~~~ 153 (338)
T 2o7r_A 81 AKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRL-------PAAYDDAMEALQWIKDSRDEW 153 (338)
T ss_dssp CCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCT-------THHHHHHHHHHHHHHTCCCHH
T ss_pred CCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCC-------chHHHHHHHHHHHHHhCCcch
Confidence 467899999997732 22 13888999997 44 9999999999876532 23345555555443
Q ss_pred -----CCCcEEEEEeChhHHHHHHHHHhCcc--------ccccEEEecccccccccccccccccccccccccccCcCcHH
Q 020916 128 -----GVDKCVLVGFSYGGMVSFKVAELYPN--------LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVK 194 (320)
Q Consensus 128 -----~~~~~~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
+.++++|+|||+||.+|+.+|.++|+ +++++|++++............ . . ...
T Consensus 154 ~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~-~-~----~~~-------- 219 (338)
T 2o7r_A 154 LTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSEL-R-L----AND-------- 219 (338)
T ss_dssp HHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHH-H-T----TTC--------
T ss_pred hhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhh-c-c----CCC--------
Confidence 23689999999999999999999888 8999999988754322111000 0 0 000
Q ss_pred HHHHHHhHhhhccccCCchhHHHHHHHHhcChhhH-HHHhhhhhccCC---CCCCCCCCCcEEEEecCCCCCCCHH--HH
Q 020916 195 GLKALLSVATYKKLWFPSCLYKDFLEVMFANRKER-AELLEGLLISNK---DPTVPNFPQRVHLLWGEDDQIFNVE--LA 268 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~P~l~i~g~~D~~~~~~--~~ 268 (320)
..........+........... ......+..... ...+..+.+|+|+++|++|.+++.. ..
T Consensus 220 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~ 286 (338)
T 2o7r_A 220 -------------SRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELA 286 (338)
T ss_dssp -------------SSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHH
T ss_pred -------------cccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchHHHHHHH
Confidence 0000000111111110000000 000000000000 0011235569999999999998633 13
Q ss_pred HHHHHHhCCCCeEEEEecCCCcccccCCh---HHHHHHHHHHHHhhh
Q 020916 269 HNMKEQLGADHVTFQGIKKAGHLVHLERP---CAYNRCLKQFLASLH 312 (320)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~ 312 (320)
+.+.+... ++++++++|+||.++.+++ +++.+.|.+||++..
T Consensus 287 ~~l~~~~~--~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 287 ERLEKKGV--DVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHHHHTTC--EEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHCCC--cEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 33333333 7899999999999888777 889999999997654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-24 Score=190.61 Aligned_cols=230 Identities=14% Similarity=0.133 Sum_probs=154.7
Q ss_pred CceEEEcCCC-ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHHH----HHHHhhcc-ceE
Q 020916 22 QPHAVEIEPG-TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQF----QVGALTKK-YSV 93 (320)
Q Consensus 22 ~~~~~~~~~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~~----~~~~l~~~-~~v 93 (320)
+...+...|| .+++++...++..+ ..+..|+||++||.+.+.. ..|.. +++.|++. |.|
T Consensus 456 ~~~~~~~~~g~~~~~~~~~~P~~~~-------------~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v 522 (706)
T 2z3z_A 456 RTGTIMAADGQTPLYYKLTMPLHFD-------------PAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAV 522 (706)
T ss_dssp EEEEEECTTSSSEEEEEEECCTTCC-------------TTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEE
T ss_pred EEEEEEcCCCCEEEEEEEEeCCCCC-------------CCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEE
Confidence 3445556678 88888877653211 0124589999999876652 14554 67888776 999
Q ss_pred EecCCCCCCCCCCCCC----CCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 94 YIPDLLFFGGSITDEA----DRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 94 i~~d~~G~G~s~~~~~----~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
+++|+||+|.+..... ...-....+|+.++++.+ +.++++|+|||+||.+++.+|.++|++++++|++++
T Consensus 523 ~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~ 602 (706)
T 2z3z_A 523 FTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGP 602 (706)
T ss_dssp EEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESC
T ss_pred EEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCC
Confidence 9999999998864311 111123356666666665 245799999999999999999999999999999987
Q ss_pred cccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCC
Q 020916 164 ILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDP 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (320)
....... . ..+.. ..... +......+.. .....
T Consensus 603 ~~~~~~~-------------------~---~~~~~----~~~~~---~~~~~~~~~~------------------~~~~~ 635 (706)
T 2z3z_A 603 VIDWNRY-------------------A---IMYGE----RYFDA---PQENPEGYDA------------------ANLLK 635 (706)
T ss_dssp CCCGGGS-------------------B---HHHHH----HHHCC---TTTCHHHHHH------------------HCGGG
T ss_pred ccchHHH-------------------H---hhhhh----hhcCC---cccChhhhhh------------------CCHhH
Confidence 6531100 0 00000 00000 0000011100 01112
Q ss_pred CCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 244 TVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 244 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
.+.++++|+|+++|++|..+|++..+.+.+.++ ..++++++++++||.++.++++++.+.|.+||++.
T Consensus 636 ~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 636 RAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDH 705 (706)
T ss_dssp GGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHH
T ss_pred hHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 345678999999999999999999888888775 23569999999999998888899999999999864
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-23 Score=170.57 Aligned_cols=216 Identities=13% Similarity=0.062 Sum_probs=131.1
Q ss_pred CCCCeEEEEcCCCC---Ccc-ccHHHHHHHhh-cc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH------hC
Q 020916 61 PSKPVVVLVHGFAA---EGI-VTWQFQVGALT-KK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK------LG 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~---~~~-~~~~~~~~~l~-~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~------~~ 128 (320)
+..|+||++||++. +.. ..|..++..|+ +. +.|+++|+||.+.+..+ ...++..+.+..+.+. ++
T Consensus 111 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~---~~~~D~~~~~~~l~~~~~~~~~~d 187 (351)
T 2zsh_A 111 DIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYP---CAYDDGWIALNWVNSRSWLKSKKD 187 (351)
T ss_dssp SSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHTCGGGCCTTT
T ss_pred CCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCc---hhHHHHHHHHHHHHhCchhhcCCC
Confidence 35689999999654 323 13888999998 44 99999999998765422 1223333333333332 24
Q ss_pred CC-cEEEEEeChhHHHHHHHHHhCcc---ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh
Q 020916 129 VD-KCVLVGFSYGGMVSFKVAELYPN---LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT 204 (320)
Q Consensus 129 ~~-~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (320)
.+ +++|+|||+||.+|+.+|.++|+ +++++|++++........... ...
T Consensus 188 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~----------------------~~~----- 240 (351)
T 2zsh_A 188 SKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTESE----------------------KSL----- 240 (351)
T ss_dssp SSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHHH----------------------HHH-----
T ss_pred CCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChhh----------------------hhc-----
Confidence 56 89999999999999999999988 899999998865322110000 000
Q ss_pred hccccCCchhHHHHHHHHhcChhhH-HHHhhhhhccCCCCCCCCCCC-cEEEEecCCCCCCCHHHHHHHHHHhC--CCCe
Q 020916 205 YKKLWFPSCLYKDFLEVMFANRKER-AELLEGLLISNKDPTVPNFPQ-RVHLLWGEDDQIFNVELAHNMKEQLG--ADHV 280 (320)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~ 280 (320)
.............+...+....... ......+ ......+..+++ |+|+++|++|.+++ ....+.+.+. ..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~ 316 (351)
T 2zsh_A 241 DGKYFVTVRDRDWYWKAFLPEGEDREHPACNPF--SPRGKSLEGVSFPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEV 316 (351)
T ss_dssp TTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTT--STTSCCCTTCCCCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCE
T ss_pred CCCcccCHHHHHHHHHHhCCCCCCCCCcccCCC--CCCccchhhCCCCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCE
Confidence 0000011111111111111000000 0000000 011234566676 99999999999876 2333444332 1378
Q ss_pred EEEEecCCCccccc----CChHHHHHHHHHHHHh
Q 020916 281 TFQGIKKAGHLVHL----ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 281 ~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~ 310 (320)
++++++|+||.++. ++++++.+.|.+||++
T Consensus 317 ~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 317 KLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 99999999999887 7889999999999975
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-22 Score=159.39 Aligned_cols=202 Identities=17% Similarity=0.104 Sum_probs=128.8
Q ss_pred CceEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCC
Q 020916 22 QPHAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDL 98 (320)
Q Consensus 22 ~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~ 98 (320)
+++.+.++ ||.+|..+.+.|.. .++.|.||++||++++.. ..+..+++.|++. |.|+++|+
T Consensus 30 ~e~~~~~~~dG~~i~g~l~~P~~----------------~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~ 93 (259)
T 4ao6_A 30 QERGFSLEVDGRTVPGVYWSPAE----------------GSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93 (259)
T ss_dssp EEEEEEEEETTEEEEEEEEEESS----------------SCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECC
T ss_pred eEEEEEEeeCCeEEEEEEEeCCC----------------CCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeecc
Confidence 34444443 89999987766532 235688999999998743 2577888999988 99999999
Q ss_pred CCCCCCCCCCCCC-------------------ChhHHHHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHhCcccc
Q 020916 99 LFFGGSITDEADR-------------------SPTFQAQCLATGLAK----LGVDKCVLVGFSYGGMVSFKVAELYPNLV 155 (320)
Q Consensus 99 ~G~G~s~~~~~~~-------------------~~~~~~~~l~~~l~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 155 (320)
||||.|....... .....+.|....++. .+.+++.++|+|+||.+++.++...|. +
T Consensus 94 rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i 172 (259)
T 4ao6_A 94 PGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-I 172 (259)
T ss_dssp CC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-E
T ss_pred CCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-e
Confidence 9999986543210 011122344444433 366789999999999999999999874 6
Q ss_pred ccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhh
Q 020916 156 QAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEG 235 (320)
Q Consensus 156 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (320)
+++|+..+...... .....+
T Consensus 173 ~Aav~~~~~~~~~~---------------------------------------------~~~~~~--------------- 192 (259)
T 4ao6_A 173 KVALLGLMGVEGVN---------------------------------------------GEDLVR--------------- 192 (259)
T ss_dssp EEEEEESCCTTSTT---------------------------------------------HHHHHH---------------
T ss_pred EEEEEecccccccc---------------------------------------------ccchhh---------------
Confidence 66665433221000 000000
Q ss_pred hhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 236 LLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 236 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
..+++++|+|+++|++|..+|++.+..+.+.+...+.++++++| +|... ...+..+.+.+||++.
T Consensus 193 --------~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~~~--p~~e~~~~~~~fl~~h 257 (259)
T 4ao6_A 193 --------LAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHSAV--PTWEMFAGTVDYLDQR 257 (259)
T ss_dssp --------HGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTTCC--CHHHHTHHHHHHHHHH
T ss_pred --------hhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCCCc--CHHHHHHHHHHHHHHh
Confidence 13457899999999999999999999999999756778888887 77533 2346777888898875
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-24 Score=162.42 Aligned_cols=187 Identities=15% Similarity=0.164 Sum_probs=136.7
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC---CCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG---GSIT 106 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G---~s~~ 106 (320)
++..++|+...+. .+.+|+||++||++++.. .|..+++.|.+.+.|+++|.+++. .+-.
T Consensus 14 ~~~~l~~~~~~~~-----------------~~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~ 75 (223)
T 3b5e_A 14 TDLAFPYRLLGAG-----------------KESRECLFLLHGSGVDET-TLVPLARRIAPTATLVAARGRIPQEDGFRWF 75 (223)
T ss_dssp CSSSSCEEEESTT-----------------SSCCCEEEEECCTTBCTT-TTHHHHHHHCTTSEEEEECCSEEETTEEESS
T ss_pred cCCCceEEEeCCC-----------------CCCCCEEEEEecCCCCHH-HHHHHHHhcCCCceEEEeCCCCCcCCccccc
Confidence 4667777665541 135699999999999999 999999999878999999987642 1110
Q ss_pred C------CCCCChhHHHHHHHHHHHHh----C--CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 107 D------EADRSPTFQAQCLATGLAKL----G--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 107 ~------~~~~~~~~~~~~l~~~l~~~----~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
. ....+....++++.++++.+ + .++++|+|||+||.+++.++.++|++++++|++++......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----- 150 (223)
T 3b5e_A 76 ERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH----- 150 (223)
T ss_dssp CEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-----
T ss_pred cccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc-----
Confidence 0 01123344566666666654 3 36899999999999999999999999999999987642100
Q ss_pred ccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEE
Q 020916 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHL 254 (320)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 254 (320)
. .....+++|+++
T Consensus 151 ------------------------------------~-------------------------------~~~~~~~~P~li 163 (223)
T 3b5e_A 151 ------------------------------------V-------------------------------PATDLAGIRTLI 163 (223)
T ss_dssp ------------------------------------C-------------------------------CCCCCTTCEEEE
T ss_pred ------------------------------------c-------------------------------ccccccCCCEEE
Confidence 0 012346789999
Q ss_pred EecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 255 LWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 255 i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
++|++|.++|.+..+ +.+.++ +.++++++++ +||.+..+. .+.+.+||++..
T Consensus 164 ~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~----~~~i~~~l~~~~ 217 (223)
T 3b5e_A 164 IAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPD----AAIVRQWLAGPI 217 (223)
T ss_dssp EEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHH----HHHHHHHHHCC-
T ss_pred EeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHHH----HHHHHHHHHhhh
Confidence 999999999998888 877775 1258899999 899986433 357788887643
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-24 Score=180.01 Aligned_cols=222 Identities=14% Similarity=0.120 Sum_probs=136.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--VDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~lvGh 137 (320)
++.|+||++||++++.. .+ .++.|++. |.|+++|+||+|.+.........++..+.+..+.+..+ .++++|+||
T Consensus 172 ~~~P~Vv~lhG~~~~~~-~~--~a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~ 248 (446)
T 3hlk_A 172 GPFPGIVDMFGTGGGLL-EY--RASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGI 248 (446)
T ss_dssp CCBCEEEEECCSSCSCC-CH--HHHHHHTTTCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTSTTBCCSSEEEEEE
T ss_pred CCCCEEEEECCCCcchh-hH--HHHHHHhCCCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhCCCCCCCCEEEEEE
Confidence 46789999999988644 33 47888877 99999999999988765444455555555544444433 368999999
Q ss_pred ChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHH
Q 020916 138 SYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKD 217 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (320)
||||.+|+.+|..+|+ ++++|++++.......... ........... .... ........ ...
T Consensus 249 S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~-------~~~~~~~~-~~~--- 309 (446)
T 3hlk_A 249 SKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLR--YKGETLPPVGV-----NRNR-------IKVTKDGY-ADI--- 309 (446)
T ss_dssp THHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEE--ETTEEECCCCB-----CGGG-------CEECSSSC-EEC---
T ss_pred CHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCcc--ccCccCCcccc-----chhc-------cccccchH-HHH---
Confidence 9999999999999997 9999999876533221100 00000000000 0000 00000000 000
Q ss_pred HHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHH-HHHHHHhC---CCCeEEEEecCCCcccc
Q 020916 218 FLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELA-HNMKEQLG---ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~gH~~~ 293 (320)
. ..+...... ........+.++++|+|+++|++|.++|.+.. +.+.+.+. ..++++++++++||.+.
T Consensus 310 -~-~~~~~~~~~-------~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~ 380 (446)
T 3hlk_A 310 -V-DVLNSPLEG-------PDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIE 380 (446)
T ss_dssp -T-TCBCCTTSG-------GGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCC
T ss_pred -H-HHHhchhhc-------cccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeEC
Confidence 0 000000000 00011123567889999999999999998443 55655553 12389999999999983
Q ss_pred ----------------------------cCChHHHHHHHHHHHHhhhh
Q 020916 294 ----------------------------LERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 294 ----------------------------~~~~~~~~~~i~~fl~~~~~ 313 (320)
.+.++++.+.|.+||++...
T Consensus 381 ~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~ 428 (446)
T 3hlk_A 381 PPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLG 428 (446)
T ss_dssp STTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 22367789999999988643
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-23 Score=159.93 Aligned_cols=179 Identities=16% Similarity=0.188 Sum_probs=132.3
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc------ceEEecCCCCCC-------------------CCCCCCCCCChhH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK------YSVYIPDLLFFG-------------------GSITDEADRSPTF 115 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~------~~vi~~d~~G~G-------------------~s~~~~~~~~~~~ 115 (320)
+..|+|||+||++++.. .|..+++.|... ++|+++|.++++ .+. +....+.++
T Consensus 21 ~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~ 98 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQ-GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDC-PEHLESIDV 98 (239)
T ss_dssp CCCEEEEEECCTTCCHH-HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSS-CCCHHHHHH
T ss_pred CCCcEEEEEecCCCchh-hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCccc-ccchhhHHH
Confidence 46789999999999998 899998888754 899998876432 111 111235566
Q ss_pred HHHHHHHHHHH-----hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCc
Q 020916 116 QAQCLATGLAK-----LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLP 190 (320)
Q Consensus 116 ~~~~l~~~l~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
.++++..+++. ++.++++|+|||+||.+++.++.++|++++++|++++........
T Consensus 99 ~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~------------------- 159 (239)
T 3u0v_A 99 MCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAV------------------- 159 (239)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHH-------------------
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHH-------------------
Confidence 77888888877 356789999999999999999999999999999998765311100
Q ss_pred CcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCc-EEEEecCCCCCCCHHHHH
Q 020916 191 NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQR-VHLLWGEDDQIFNVELAH 269 (320)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~ 269 (320)
. ... . .....+| +++++|++|.+++.+..+
T Consensus 160 ------------------------~-~~~--------------~----------~~~~~~pp~li~~G~~D~~v~~~~~~ 190 (239)
T 3u0v_A 160 ------------------------Y-QAL--------------Q----------KSNGVLPELFQCHGTADELVLHSWAE 190 (239)
T ss_dssp ------------------------H-HHH--------------H----------HCCSCCCCEEEEEETTCSSSCHHHHH
T ss_pred ------------------------H-HHH--------------H----------hhccCCCCEEEEeeCCCCccCHHHHH
Confidence 0 000 0 1223456 999999999999998888
Q ss_pred HHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 270 NMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 270 ~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.+.+.+. ..++++++++|+||.+. ++..+.+.+||++...
T Consensus 191 ~~~~~l~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 191 ETNSMLKSLGVTTKFHSFPNVYHELS----KTELDILKLWILTKLP 232 (239)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCSSCC----HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCcEEEEEeCCCCCcCC----HHHHHHHHHHHHHhCC
Confidence 8877775 23689999999999987 3445667777776543
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-22 Score=163.81 Aligned_cols=235 Identities=11% Similarity=0.112 Sum_probs=144.8
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCe-EEEEcCCC---CCccccHHHHHHHhhc--cceE
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPV-VVLVHGFA---AEGIVTWQFQVGALTK--KYSV 93 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vv~lhG~~---~~~~~~~~~~~~~l~~--~~~v 93 (320)
+++.+.+.+ +|.++ |+..+. +.+++ ||++||.+ ++.. .|..++..|.. .|.|
T Consensus 57 ~~~~~~~~~-~g~~~-~~p~~~-------------------~~~~~~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v 114 (322)
T 3k6k_A 57 GVELTLTDL-GGVPC-IRQATD-------------------GAGAAHILYFHGGGYISGSPS-THLVLTTQLAKQSSATL 114 (322)
T ss_dssp TCEEEEEEE-TTEEE-EEEECT-------------------TCCSCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTCEE
T ss_pred CceEEEEEE-CCEeE-EecCCC-------------------CCCCeEEEEEcCCcccCCChH-HHHHHHHHHHHhcCCEE
Confidence 455566666 68777 533332 35566 99999976 6666 88888888876 3999
Q ss_pred EecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-hCCCcEEEEEeChhHHHHHHHHHhCccc----cccEEEeccccccc
Q 020916 94 YIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-LGVDKCVLVGFSYGGMVSFKVAELYPNL----VQAMVVSGSILAMT 168 (320)
Q Consensus 94 i~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~ 168 (320)
+++|+|+.+.+..+ ...++..+.+..+++. ++.++++|+|||+||.+|+.++.+.+++ ++++|++++.....
T Consensus 115 ~~~dyr~~~~~~~~---~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 191 (322)
T 3k6k_A 115 WSLDYRLAPENPFP---AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLT 191 (322)
T ss_dssp EEECCCCTTTSCTT---HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTT
T ss_pred EEeeCCCCCCCCCc---hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcc
Confidence 99999998766432 2334444444445554 4567899999999999999999988776 99999999876432
Q ss_pred ccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC
Q 020916 169 DSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF 248 (320)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (320)
....... . ...............+...+.............+. ..+ ..
T Consensus 192 ~~~~~~~-~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-----~~~-~~ 239 (322)
T 3k6k_A 192 LSRWSNS-N-------------------------LADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVY-----ADL-SG 239 (322)
T ss_dssp CCSHHHH-H-------------------------TGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGG-----SCC-TT
T ss_pred cCccchh-h-------------------------ccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCccc-----ccc-cC
Confidence 2111000 0 00000111111122222222111000000000000 111 12
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-----CChHHHHHHHHHHHHhhhh
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-----ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~~ 313 (320)
..|+|+++|++|.++ +....+.+.+. +.++++++++|++|.++. +.++++.+.+.+||++...
T Consensus 240 ~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3k6k_A 240 LPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARIS 309 (322)
T ss_dssp CCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHh
Confidence 359999999999874 45555555543 236899999999998764 3467899999999988643
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=191.37 Aligned_cols=232 Identities=16% Similarity=0.112 Sum_probs=157.9
Q ss_pred CCCceEEEcCCC-ceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCc---cccHH-----HHHHHhhcc
Q 020916 20 GVQPHAVEIEPG-TTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEG---IVTWQ-----FQVGALTKK 90 (320)
Q Consensus 20 ~~~~~~~~~~~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~---~~~~~-----~~~~~l~~~ 90 (320)
..+...+...|| .+++|+...++..+ ..+..|+||++||++++. . .|. .+++.|++.
T Consensus 486 ~~~~~~~~~~~g~~~l~~~~~~P~~~~-------------~~~~~p~vv~~hG~~~~~~~~~-~~~~~~~~~~~~~l~~~ 551 (741)
T 2ecf_A 486 PVEFGTLTAADGKTPLNYSVIKPAGFD-------------PAKRYPVAVYVYGGPASQTVTD-SWPGRGDHLFNQYLAQQ 551 (741)
T ss_dssp CEEEEEEECTTSSCEEEEEEECCSSCC-------------TTSCEEEEEECCCSTTCCSCSS-CCCCSHHHHHHHHHHHT
T ss_pred CcEEEEEEcCCCCEEEEEEEEeCCCCC-------------CCCCcCEEEEEcCCCCcccccc-cccccchhHHHHHHHhC
Confidence 344555666689 89999887653211 012468999999998774 3 454 578888777
Q ss_pred -ceEEecCCCCCCCCCCCCC---CCCh-hHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEE
Q 020916 91 -YSVYIPDLLFFGGSITDEA---DRSP-TFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159 (320)
Q Consensus 91 -~~vi~~d~~G~G~s~~~~~---~~~~-~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 159 (320)
|.|+++|+||+|.|..... .... ....+|+.++++.+ +.++++++|||+||.+++.++.++|++++++|
T Consensus 552 G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 631 (741)
T 2ecf_A 552 GYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGV 631 (741)
T ss_dssp TCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEE
T ss_pred CCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEE
Confidence 9999999999999754211 1111 12355666666555 24579999999999999999999999999999
Q ss_pred EecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhcc
Q 020916 160 VSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLIS 239 (320)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (320)
++++....... . ..+.. .... .+......+. ..
T Consensus 632 ~~~~~~~~~~~------~----------------~~~~~----~~~~---~~~~~~~~~~------------------~~ 664 (741)
T 2ecf_A 632 AGAPVTDWGLY------D----------------SHYTE----RYMD---LPARNDAGYR------------------EA 664 (741)
T ss_dssp EESCCCCGGGS------B----------------HHHHH----HHHC---CTGGGHHHHH------------------HH
T ss_pred EcCCCcchhhh------c----------------cccch----hhcC---CcccChhhhh------------------hc
Confidence 99876532100 0 00000 0000 0000001110 01
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 240 NKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 240 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
.....+.++++|+|+++|++|..++.+..+.+.+.++ ...+++++++++||.++.+.++++.+.|.+||++..
T Consensus 665 ~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l 739 (741)
T 2ecf_A 665 RVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRCL 739 (741)
T ss_dssp CSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHHhc
Confidence 1112345678999999999999999999998888875 234699999999999988777899999999998764
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=168.81 Aligned_cols=218 Identities=9% Similarity=-0.057 Sum_probs=131.6
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC--CcEE
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV--DKCV 133 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~ 133 (320)
+..|+||++||++ ++.. .|..++..|.+. |.|+++|+||+|.+..+....+....++.+.+.++.++. ++++
T Consensus 77 ~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~ 155 (323)
T 1lzl_A 77 GPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIA 155 (323)
T ss_dssp SCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEE
T ss_pred CCCcEEEEECCCccccCChh-hhHHHHHHHHHhcCcEEEEecCCCCCCCCCCchHHHHHHHHHHHHhhHHHcCCChhheE
Confidence 3568999999998 7777 888899888874 999999999999886442211222223333333334454 5899
Q ss_pred EEEeChhHHHHHHHHHhCccc----cccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 134 LVGFSYGGMVSFKVAELYPNL----VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
|+|||+||.+++.++.+++++ ++++|++++.......... .... . ....
T Consensus 156 l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~--~~~~-----~--------------------~~~~ 208 (323)
T 1lzl_A 156 VGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVS--MTNF-----V--------------------DTPL 208 (323)
T ss_dssp EEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHH--HHHC-----S--------------------SCSS
T ss_pred EEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchh--HHHh-----c--------------------cCCC
Confidence 999999999999999887764 9999999887643221100 0000 0 0000
Q ss_pred CCchhHHHHHHHHhcChh------hHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeE
Q 020916 210 FPSCLYKDFLEVMFANRK------ERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVT 281 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~ 281 (320)
........+...+..... ........+. ...+.. .+|+++++|++|.+++ ....+.+.+. +.+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~----~~~~~~-~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~~~ 281 (323)
T 1lzl_A 209 WHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSR----ATDLTG-LPPTYLSTMELDPLRD--EGIEYALRLLQAGVSVE 281 (323)
T ss_dssp CCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGG----CSCCTT-CCCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHhCCCCcccccccCCCcccCccc----CcccCC-CChhheEECCcCCchH--HHHHHHHHHHHcCCCEE
Confidence 111111111111111100 0000000000 001111 2699999999999873 4444444442 23789
Q ss_pred EEEecCCCccccc----CChHHHHHHHHHHHHhhhh
Q 020916 282 FQGIKKAGHLVHL----ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 282 ~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~~~ 313 (320)
+++++|++|.+.. +.++++.+.+.+||++...
T Consensus 282 ~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 282 LHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp EEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 9999999997553 2367899999999988653
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-24 Score=173.41 Aligned_cols=223 Identities=11% Similarity=0.059 Sum_probs=150.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-CCCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-GVDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvGhS~ 139 (320)
+++++|+|+||++++.. .|..+++.|...++|+++|+||+|.+.. ...+++.+++++.+.+..+ ..++++|+||||
T Consensus 99 g~~~~l~~lhg~~~~~~-~~~~l~~~L~~~~~v~~~d~~g~~~~~~--~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~ 175 (329)
T 3tej_A 99 GNGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIIGIQSPRPNGPMQ--TAANLDEVCEAHLATLLEQQPHGPYYLLGYSL 175 (329)
T ss_dssp CSSCEEEEECCTTSCCG-GGGGGGGTSCTTCEEEEECCCTTTSHHH--HCSSHHHHHHHHHHHHHHHCSSSCEEEEEETH
T ss_pred CCCCcEEEEeCCcccch-HHHHHHHhcCCCCeEEEeeCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 46789999999999999 9999999998779999999999988753 2357889999988888776 457899999999
Q ss_pred hHHHHHHHHHh---CccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhc-cccCCchhH
Q 020916 140 GGMVSFKVAEL---YPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYK-KLWFPSCLY 215 (320)
Q Consensus 140 Gg~~a~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 215 (320)
||.+|+.+|.+ +|++|.+++++++............. ..................... .........
T Consensus 176 Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (329)
T 3tej_A 176 GGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEA---------NGLDPEVLAEINREREAFLAAQQGSTSTELF 246 (329)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC--------------CCCCTHHHHHHHHHHHHHHTTCCCSCCHHH
T ss_pred CHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccc---------cccChhhHHHHHHHHHHHHHhccccccHHHH
Confidence 99999999998 99999999999987643211110000 000111111111111111111 111122222
Q ss_pred HHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC
Q 020916 216 KDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE 295 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 295 (320)
..+...+. ...... .......+++|++++.|++|...+.+....+.+..+ +++++.++ +||+.+++
T Consensus 247 ~~~~~~~~----~~~~~~-------~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~~--~~~~~~v~-g~H~~~~~ 312 (329)
T 3tej_A 247 TTIEGNYA----DAVRLL-------TTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIA--ELDIYRQD-CAHVDIIS 312 (329)
T ss_dssp HHHHHHHH----HHHHHH-------TTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTEE--EEEEEEES-SCGGGGGS
T ss_pred HHHHHHHH----HHHHHH-------hcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhcC--CcEEEEec-CChHHhCC
Confidence 22222111 000111 112345789999999999998876666666777666 88999998 69998887
Q ss_pred Ch--HHHHHHHHHHHH
Q 020916 296 RP--CAYNRCLKQFLA 309 (320)
Q Consensus 296 ~~--~~~~~~i~~fl~ 309 (320)
.| +.+++.|.+||.
T Consensus 313 ~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 313 PGTFEKIGPIIRATLN 328 (329)
T ss_dssp TTTHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHhc
Confidence 76 789999999874
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.7e-23 Score=159.93 Aligned_cols=205 Identities=18% Similarity=0.155 Sum_probs=137.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceE--------------EecCCCCCCCCCCC-------CCCCChhHHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSV--------------YIPDLLFFGGSITD-------EADRSPTFQAQCL 120 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v--------------i~~d~~G~G~s~~~-------~~~~~~~~~~~~l 120 (320)
.+++|||+||++++.. .|..+++.|.+.+.+ +.+|-.+.+.+..+ ....+++.+++++
T Consensus 2 ~~~pvvllHG~~~~~~-~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l 80 (254)
T 3ds8_A 2 DQIPIILIHGSGGNAS-SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWL 80 (254)
T ss_dssp CCCCEEEECCTTCCTT-TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHH
T ss_pred CCCCEEEECCCCCCcc-hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHH
Confidence 4678999999999999 999999999887544 44442222222222 2346788888888
Q ss_pred HHH----HHHhCCCcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEecccccccccccccccccccccccccccCcC
Q 020916 121 ATG----LAKLGVDKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPN 191 (320)
Q Consensus 121 ~~~----l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
.++ .+.++.++++++||||||.+++.++.++|+ +|+++|+++++.......... ..+.
T Consensus 81 ~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~--~~~~----------- 147 (254)
T 3ds8_A 81 KIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNG--MDLS----------- 147 (254)
T ss_dssp HHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHC--SCTT-----------
T ss_pred HHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccc--cccc-----------
Confidence 444 455678899999999999999999999998 899999999876433211000 0000
Q ss_pred cHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC------CCCCCCH
Q 020916 192 SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE------DDQIFNV 265 (320)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~ 265 (320)
....+.. . ..+..+ ... ...++. ++|++.|+|+ .|.++|.
T Consensus 148 ---------------~~~~p~~-~-~~~~~~----------~~~------~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~ 193 (254)
T 3ds8_A 148 ---------------FKKLPNS-T-PQMDYF----------IKN------QTEVSP-DLEVLAIAGELSEDNPTDGIVPT 193 (254)
T ss_dssp ---------------CSSCSSC-C-HHHHHH----------HHT------GGGSCT-TCEEEEEEEESBTTBCBCSSSBH
T ss_pred ---------------cccCCcc-h-HHHHHH----------HHH------HhhCCC-CcEEEEEEecCCCCCCCCcEeeH
Confidence 0000000 0 000000 000 012232 6899999999 9999999
Q ss_pred HHHHHHHHHhCCC--CeEEEEecC--CCcccccCChHHHHHHHHHHHHhhhhcc
Q 020916 266 ELAHNMKEQLGAD--HVTFQGIKK--AGHLVHLERPCAYNRCLKQFLASLHADE 315 (320)
Q Consensus 266 ~~~~~~~~~~~~~--~~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 315 (320)
+.++.+...++.. ..+.+++.| ++|..+.++|+ +.+.|..||++..+..
T Consensus 194 ~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~~~~~~ 246 (254)
T 3ds8_A 194 ISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEKFKTDE 246 (254)
T ss_dssp HHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHHhcCCC
Confidence 9999888777621 244556665 77999999886 9999999999876543
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=169.92 Aligned_cols=211 Identities=12% Similarity=0.070 Sum_probs=131.7
Q ss_pred CCCCeEEEEcC---CCCCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh--------
Q 020916 61 PSKPVVVLVHG---FAAEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-------- 127 (320)
Q Consensus 61 ~~~~~vv~lhG---~~~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-------- 127 (320)
++.|+||++|| ++++.. .|..+++.|++. +.|+++|+||+|.+..+ ...+|+.++++.+
T Consensus 72 ~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~-------~~~~d~~~~~~~l~~~~~~~~ 143 (310)
T 2hm7_A 72 PPYPALVYYHGGSWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEHKFP-------AAVEDAYDALQWIAERAADFH 143 (310)
T ss_dssp SSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCTT-------HHHHHHHHHHHHHHHTTGGGT
T ss_pred CCCCEEEEECCCccccCChh-HhHHHHHHHHHhcCCEEEEeCCCCCCCCCCC-------ccHHHHHHHHHHHHhhHHHhC
Confidence 35789999999 777877 899999999874 99999999999887532 2334444444332
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCcc----ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhH
Q 020916 128 -GVDKCVLVGFSYGGMVSFKVAELYPN----LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSV 202 (320)
Q Consensus 128 -~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (320)
+.++++|+|||+||.+|+.++.++|+ +++++|++++............ ...
T Consensus 144 ~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~--------------------~~~---- 199 (310)
T 2hm7_A 144 LDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPAS--------------------IEE---- 199 (310)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCHH--------------------HHH----
T ss_pred CCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCcc--------------------hhh----
Confidence 23579999999999999999998877 6999999998764321000000 000
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhHHH-HhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCC
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKERAE-LLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADH 279 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~ 279 (320)
..............+...+......... ..... ....+..+ .|+++++|++|.++ +....+.+.+. +.+
T Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l~~~g~~ 271 (310)
T 2hm7_A 200 -NAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPV----LYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEALNKAGVK 271 (310)
T ss_dssp -TSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGG----GCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTCC
T ss_pred -cCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCC----cCccccCC-CCEEEEEecCCCch--HHHHHHHHHHHHCCCC
Confidence 0000111111222222222211110000 00000 01123333 39999999999987 34555555553 236
Q ss_pred eEEEEecCCCccccc-----CChHHHHHHHHHHHHhh
Q 020916 280 VTFQGIKKAGHLVHL-----ERPCAYNRCLKQFLASL 311 (320)
Q Consensus 280 ~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~ 311 (320)
+++++++|++|.+.. +.++++.+.+.+||++.
T Consensus 272 ~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 308 (310)
T 2hm7_A 272 VEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 308 (310)
T ss_dssp EEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHH
Confidence 899999999996653 45688999999999864
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-23 Score=155.42 Aligned_cols=176 Identities=13% Similarity=0.057 Sum_probs=125.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC------CCCChhHHHHHHHHHHHH---hC--
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE------ADRSPTFQAQCLATGLAK---LG-- 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~------~~~~~~~~~~~l~~~l~~---~~-- 128 (320)
..+++|||+||+|++.. .|..+++.|... +.|+++|.+|++.-+... .....+...+.+..+++. .+
T Consensus 20 ~a~~~Vv~lHG~G~~~~-~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 98 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTAA-DIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGIP 98 (210)
T ss_dssp TCSEEEEEECCTTCCHH-HHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCcEEEEEeCCCCCHH-HHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 36789999999999988 899999999876 999999998875321111 112233334444444443 23
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL 208 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (320)
.++++|+|+|+||.+++.++.++|+++.++|.+++.........
T Consensus 99 ~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~------------------------------------ 142 (210)
T 4h0c_A 99 AEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAI------------------------------------ 142 (210)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCG------------------------------------
T ss_pred hhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhh------------------------------------
Confidence 45799999999999999999999999999998886542111000
Q ss_pred cCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEec
Q 020916 209 WFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIK 286 (320)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 286 (320)
. .. .....++|++++||++|+++|.+..+.+.+.+. +.+++++++|
T Consensus 143 ---~---------------------------~~--~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~yp 190 (210)
T 4h0c_A 143 ---G---------------------------NY--KGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYP 190 (210)
T ss_dssp ---G---------------------------GC--CBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ---h---------------------------hh--hhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 0 00 001124699999999999999999888777664 3468899999
Q ss_pred CCCcccccCChHHHHHHHHHHHH
Q 020916 287 KAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 287 ~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
|.||.+. +++ .+.|.+||.
T Consensus 191 g~gH~i~---~~e-l~~i~~wL~ 209 (210)
T 4h0c_A 191 GRPHTIS---GDE-IQLVNNTIL 209 (210)
T ss_dssp TCCSSCC---HHH-HHHHHHTTT
T ss_pred CCCCCcC---HHH-HHHHHHHHc
Confidence 9999764 444 356777775
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-23 Score=158.05 Aligned_cols=192 Identities=17% Similarity=0.158 Sum_probs=138.3
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc----ceEEecCCCCCCCCC--C--------CC---------CCC-ChhHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK----YSVYIPDLLFFGGSI--T--------DE---------ADR-SPTFQA 117 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~----~~vi~~d~~G~G~s~--~--------~~---------~~~-~~~~~~ 117 (320)
.+++|||+||++++.. .|..+++.|.+. ++|+.+|.+++|.+. . +. ..+ +++.++
T Consensus 3 ~~~pvv~iHG~~~~~~-~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 3 RMAPVIMVPGSSASQN-RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp SCCCEEEECCCGGGHH-HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCCCEEEECCCCCCHH-HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 5678999999999999 999999999875 579988888777521 1 10 001 456778
Q ss_pred HHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhC-----ccccccEEEeccccccccccccccccccccccccccc
Q 020916 118 QCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELY-----PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELL 188 (320)
Q Consensus 118 ~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (320)
+++.++++.+ +.++++++||||||.+++.++..+ +++|+++|+++++........
T Consensus 82 ~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~---------------- 145 (250)
T 3lp5_A 82 VWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST---------------- 145 (250)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS----------------
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc----------------
Confidence 8888888887 788999999999999999999887 568999999998764332100
Q ss_pred CcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC----CCCCCC
Q 020916 189 LPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE----DDQIFN 264 (320)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~----~D~~~~ 264 (320)
. ......+.+. .. ...++. ++|+++|+|+ .|.++|
T Consensus 146 -~-------------------~~~~~~~~l~--------------~~------~~~lp~-~vpvl~I~G~~~~~~Dg~Vp 184 (250)
T 3lp5_A 146 -T-------------------AKTSMFKELY--------------RY------RTGLPE-SLTVYSIAGTENYTSDGTVP 184 (250)
T ss_dssp -S-------------------CCCHHHHHHH--------------HT------GGGSCT-TCEEEEEECCCCCCTTTBCC
T ss_pred -c-------------------ccCHHHHHHH--------------hc------cccCCC-CceEEEEEecCCCCCCceee
Confidence 0 0000011110 00 112333 6899999999 999999
Q ss_pred HHHHHHHHHHhCCC--CeEEEEec--CCCcccccCChHHHHHHHHHHHHhhh
Q 020916 265 VELAHNMKEQLGAD--HVTFQGIK--KAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 265 ~~~~~~~~~~~~~~--~~~~~~~~--~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
.+.++.+...++.. ..+.+.+. +++|..+.++| ++.+.|.+||.+..
T Consensus 185 ~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~~~ 235 (250)
T 3lp5_A 185 YNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLAET 235 (250)
T ss_dssp HHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhccc
Confidence 99988877777621 22333443 47799999988 79999999997543
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9.2e-23 Score=181.23 Aligned_cols=243 Identities=12% Similarity=0.079 Sum_probs=157.3
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~ 99 (320)
+...+...+|.+++++...+...+ ......+..|+||++||++++.. ..|..+++.|++. |.|+++|+|
T Consensus 392 ~~~~~~~~dg~~i~~~~~~P~~~~---------~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 462 (662)
T 3azo_A 392 QIRTFTAPDGREIHAHIYPPHSPD---------FTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYG 462 (662)
T ss_dssp EEEEEECTTSCEEEEEEECCCCSS---------EECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECT
T ss_pred eEEEEEcCCCCEEEEEEECCCCcc---------ccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCC
Confidence 334455557888888776653210 00000135789999999976543 2677788889887 999999999
Q ss_pred C---CCCCCCCC-----CCCChhHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccc
Q 020916 100 F---FGGSITDE-----ADRSPTFQAQCLATGLAK--LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTD 169 (320)
Q Consensus 100 G---~G~s~~~~-----~~~~~~~~~~~l~~~l~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 169 (320)
| ||.+.... .....+++.+.+..+++. ++.++++|+|||+||.+++.++.. |++++++|++++......
T Consensus 463 G~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~ 541 (662)
T 3azo_A 463 GSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLG 541 (662)
T ss_dssp TCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHH
T ss_pred CCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHH
Confidence 9 77664221 123355666666666666 456789999999999999998886 899999999987653211
Q ss_pred cccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCC
Q 020916 170 SINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFP 249 (320)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (320)
.... .... . ...+ ..... ... + +..+.+.. ......+.+++
T Consensus 542 ~~~~---------~~~~-~----~~~~---~~~~~-~~~--~-~~~~~~~~------------------~sp~~~~~~~~ 582 (662)
T 3azo_A 542 WADG---------GTHD-F----ESRY---LDFLI-GSF--E-EFPERYRD------------------RAPLTRADRVR 582 (662)
T ss_dssp HHTT---------CSCG-G----GTTH---HHHHT-CCT--T-TCHHHHHH------------------TCGGGGGGGCC
T ss_pred Hhcc---------cccc-h----hhHh---HHHHh-CCC--c-cchhHHHh------------------hChHhHhccCC
Confidence 0000 0000 0 0000 00000 000 0 00111000 01112345678
Q ss_pred CcEEEEecCCCCCCCHHHHHHHHHHhCC--CCeEEEEecCCCcccc-cCChHHHHHHHHHHHHhhhh
Q 020916 250 QRVHLLWGEDDQIFNVELAHNMKEQLGA--DHVTFQGIKKAGHLVH-LERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 250 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~~~ 313 (320)
+|+|+++|++|..+|++..+.+.+.++. ..+++++++++||.+. .++++++.+.+.+||.+...
T Consensus 583 ~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 649 (662)
T 3azo_A 583 VPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFG 649 (662)
T ss_dssp SCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999872 2459999999999875 35678899999999988653
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=163.81 Aligned_cols=211 Identities=12% Similarity=0.033 Sum_probs=132.2
Q ss_pred CCCeEEEEcCCC---CCccccHHHHHHHhhc--cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-------C-
Q 020916 62 SKPVVVLVHGFA---AEGIVTWQFQVGALTK--KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-------G- 128 (320)
Q Consensus 62 ~~~~vv~lhG~~---~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-------~- 128 (320)
.+|+||++||++ ++.. .|..++..|+. .+.|+++|+|+.+....+ ...+|+.+.++.+ +
T Consensus 86 ~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~-------~~~~D~~~a~~~l~~~~~~~~~ 157 (326)
T 3ga7_A 86 SQATLYYLHGGGFILGNLD-THDRIMRLLARYTGCTVIGIDYSLSPQARYP-------QAIEETVAVCSYFSQHADEYSL 157 (326)
T ss_dssp CSCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHCSEEEEECCCCTTTSCTT-------HHHHHHHHHHHHHHHTTTTTTC
T ss_pred CCcEEEEECCCCcccCChh-hhHHHHHHHHHHcCCEEEEeeCCCCCCCCCC-------cHHHHHHHHHHHHHHhHHHhCC
Confidence 459999999988 7877 89999999988 499999999987654322 2234444443332 2
Q ss_pred -CCcEEEEEeChhHHHHHHHHHhCccc------cccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHh
Q 020916 129 -VDKCVLVGFSYGGMVSFKVAELYPNL------VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLS 201 (320)
Q Consensus 129 -~~~~~lvGhS~Gg~~a~~~a~~~p~~------v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (320)
.++++|+|||+||.+|+.++.+.+++ +++++++.+............. ..
T Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~--------~~--------------- 214 (326)
T 3ga7_A 158 NVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRLF--------GG--------------- 214 (326)
T ss_dssp CCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHHHHC--------CC---------------
T ss_pred ChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhHhhh--------cC---------------
Confidence 35899999999999999999988774 8888888776432211000000 00
Q ss_pred HhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCC
Q 020916 202 VATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADH 279 (320)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~ 279 (320)
....+.......+...+.............. ....+.....|+++++|+.|++++ ....+.+.+. +..
T Consensus 215 ----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~~ 284 (326)
T 3ga7_A 215 ----AWDGLTREDLDMYEKAYLRNDEDRESPWYCL----FNNDLTRDVPPCFIASAEFDPLID--DSRLLHQTLQAHQQP 284 (326)
T ss_dssp ----TTTTCCHHHHHHHHHHHCSSGGGGGCTTTSG----GGSCCSSCCCCEEEEEETTCTTHH--HHHHHHHHHHHTTCC
T ss_pred ----CCCCCCHHHHHHHHHHhCCCCCccCCcccCC----CcchhhcCCCCEEEEecCcCcCHH--HHHHHHHHHHHCCCc
Confidence 0001112222223332222111111100000 012334455699999999999973 4455555543 236
Q ss_pred eEEEEecCCCccccc-----CChHHHHHHHHHHHHhhhh
Q 020916 280 VTFQGIKKAGHLVHL-----ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 280 ~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~~ 313 (320)
+++++++|++|.+.. +..+++.+.+.+||++...
T Consensus 285 ~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~ 323 (326)
T 3ga7_A 285 CEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMK 323 (326)
T ss_dssp EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhc
Confidence 899999999998753 3458899999999988654
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.89 E-value=6.6e-24 Score=170.55 Aligned_cols=197 Identities=15% Similarity=0.135 Sum_probs=134.0
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHH-------HHhCC
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGL-------AKLGV 129 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l-------~~~~~ 129 (320)
+..|+||++||.+ ++.. .|..+++.|.+. |.|+++|+||+|.+. .....+|+.+++ +.++.
T Consensus 80 ~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~r~~~~~~-------~~~~~~d~~~~~~~l~~~~~~~~~ 151 (303)
T 4e15_A 80 NQAPLFVFVHGGYWQEMDMS-MSCSIVGPLVRRGYRVAVMDYNLCPQVT-------LEQLMTQFTHFLNWIFDYTEMTKV 151 (303)
T ss_dssp TTCCEEEEECCSTTTSCCGG-GSCTTHHHHHHTTCEEEEECCCCTTTSC-------HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCcCcCCChh-HHHHHHHHHHhCCCEEEEecCCCCCCCC-------hhHHHHHHHHHHHHHHHHhhhcCC
Confidence 4689999999944 4555 677788888877 999999999998753 233333333333 35567
Q ss_pred CcEEEEEeChhHHHHHHHHHhCc-------cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhH
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYP-------NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSV 202 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (320)
++++|+|||+||.+++.++.+.+ ++++++|++++........... ......
T Consensus 152 ~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~------~~~~~~---------------- 209 (303)
T 4e15_A 152 SSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLE------SVNPKN---------------- 209 (303)
T ss_dssp SCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCT------TTSGGG----------------
T ss_pred CeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhccc------ccchhh----------------
Confidence 89999999999999999997643 3799999998875321110000 000000
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC----CCcEEEEecCCCCCCCHHHHHHHHHHhC--
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF----PQRVHLLWGEDDQIFNVELAHNMKEQLG-- 276 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 276 (320)
. .....+. ...... ....+..+ .+|+++++|++|..++.+.++.+.+.++
T Consensus 210 ~----~~~~~~~---------------~~~~sp-----~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~ 265 (303)
T 4e15_A 210 I----LGLNERN---------------IESVSP-----MLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKK 265 (303)
T ss_dssp T----TCCCTTT---------------TTTTCG-----GGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred h----hcCCHHH---------------HHHcCc-----hhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHC
Confidence 0 0000000 000000 00223433 8999999999999999999999888875
Q ss_pred CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 277 ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 277 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+.++++++++|++|+.+.+.+......+.+||.+.
T Consensus 266 g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 300 (303)
T 4e15_A 266 GYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRNI 300 (303)
T ss_dssp TCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHHHH
T ss_pred CCceEEEEeCCCCchHHHHHHhCCCcHHHHHHHHh
Confidence 23679999999999999998888888888888765
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-22 Score=152.87 Aligned_cols=203 Identities=17% Similarity=0.157 Sum_probs=134.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-c--eEEecCCCCCCCCCCCC------------------CCCChhHHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-Y--SVYIPDLLFFGGSITDE------------------ADRSPTFQAQCL 120 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~--~vi~~d~~G~G~s~~~~------------------~~~~~~~~~~~l 120 (320)
+.++|||+||++++.. .|..+++.|.+. + +|+.+|.+++|.+.... ...+...+++++
T Consensus 5 ~~~pvvliHG~~~~~~-~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 5 KTTATLFLHGYGGSER-SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CCEEEEEECCTTCCGG-GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 5789999999999999 999999999887 3 79999999888752110 012344456666
Q ss_pred HHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEecccccccccccccccccccccccccccCcC
Q 020916 121 ATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPN 191 (320)
Q Consensus 121 ~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
.++++.+ +.+++.++||||||.+++.++.++|+ +|+++|+++++........... .. ..+
T Consensus 84 ~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~----~~----~~~--- 152 (249)
T 3fle_A 84 KEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENV----NE----IIV--- 152 (249)
T ss_dssp HHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCT----TT----SCB---
T ss_pred HHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCc----ch----hhh---
Confidence 6655544 78899999999999999999999874 7999999998764432110000 00 000
Q ss_pred cHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC------CCCCCCH
Q 020916 192 SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE------DDQIFNV 265 (320)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~ 265 (320)
.....+......+ +.+... ...++..++|+|.|+|+ .|..||.
T Consensus 153 --------------~~~g~p~~~~~~~-~~l~~~----------------~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~ 201 (249)
T 3fle_A 153 --------------DKQGKPSRMNAAY-RQLLSL----------------YKIYCGKEIEVLNIYGDLEDGSHSDGRVSN 201 (249)
T ss_dssp --------------CTTCCBSSCCHHH-HHTGGG----------------HHHHTTTTCEEEEEEEECCSSSCBSSSSBH
T ss_pred --------------cccCCCcccCHHH-HHHHHH----------------HhhCCccCCeEEEEeccCCCCCCCCCcccH
Confidence 0000000000000 111000 11245467899999998 6999999
Q ss_pred HHHHHHHHHhCC--CCeEEEEecC--CCcccccCChHHHHHHHHHHH
Q 020916 266 ELAHNMKEQLGA--DHVTFQGIKK--AGHLVHLERPCAYNRCLKQFL 308 (320)
Q Consensus 266 ~~~~~~~~~~~~--~~~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl 308 (320)
..++.+...+.. ...+.+++.| +.|....+++ ++.+.|.+||
T Consensus 202 ~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 202 SSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp HHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 988877666651 1234566655 8999999877 6888999987
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=166.20 Aligned_cols=227 Identities=11% Similarity=0.010 Sum_probs=132.2
Q ss_pred CCCeEEEEcCCC---CCcc-ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCC-CCChhHH---HHHHHHHHHHhCCCcE
Q 020916 62 SKPVVVLVHGFA---AEGI-VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEA-DRSPTFQ---AQCLATGLAKLGVDKC 132 (320)
Q Consensus 62 ~~~~vv~lhG~~---~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~-~~~~~~~---~~~l~~~l~~~~~~~~ 132 (320)
..|+||++||++ ++.. ..|..+++.|++. +.|+++|+||+|.|..... .....+. ++.+.+.++.++.+++
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i 187 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGV 187 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCCCccHHHHHHHHHHHHhhHHhcCCCeE
Confidence 458999999976 3332 1577788888855 9999999999975542211 1112222 3344444455576799
Q ss_pred EEEEeChhHHHHHHHHHh-----CccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 133 VLVGFSYGGMVSFKVAEL-----YPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 133 ~lvGhS~Gg~~a~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
+|+|||+||.+++.++.. +|++++++|++++............... .. ..+.. ...
T Consensus 188 ~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~~-~~------------~~~~~------~~~ 248 (361)
T 1jkm_A 188 VVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLT-EL------------PSLVE------NDG 248 (361)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHH-HC------------THHHH------TTT
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccccccc-cC------------cchhh------ccC
Confidence 999999999999999988 8889999999998764311100000000 00 00000 000
Q ss_pred ccCCchhHHHHHHHHhcChhhHH-HHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEE
Q 020916 208 LWFPSCLYKDFLEVMFANRKERA-ELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQG 284 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~ 284 (320)
..........+...+........ .....+ ......+..+. |+|+++|++|.+++ ..+.+.+.+. +.++++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~l~~ 323 (361)
T 1jkm_A 249 YFIENGGMALLVRAYDPTGEHAEDPIAWPY--FASEDELRGLP-PFVVAVNELDPLRD--EGIAFARRLARAGVDVAARV 323 (361)
T ss_dssp SSSCHHHHHHHHHHHSSSSTTTTCTTTCGG--GCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEE
T ss_pred cccCHHHHHHHHHHhCCCCCCCCCcccCcc--ccChhhHcCCC-ceEEEEcCcCcchh--hHHHHHHHHHHcCCCEEEEE
Confidence 11111112222222211100000 000000 00011233444 99999999999986 4455555553 23679999
Q ss_pred ecCCCcccc-c-----CCh-HHHHHHHHHHHHhhh
Q 020916 285 IKKAGHLVH-L-----ERP-CAYNRCLKQFLASLH 312 (320)
Q Consensus 285 ~~~~gH~~~-~-----~~~-~~~~~~i~~fl~~~~ 312 (320)
++|++|.++ . +.+ +++.+.|.+||++..
T Consensus 324 ~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 324 NIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp ETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999999887 3 344 788999999998764
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.8e-23 Score=164.64 Aligned_cols=211 Identities=12% Similarity=0.090 Sum_probs=141.9
Q ss_pred eEEEEcC--CCCCccccHHHHHHHhhccceEEecCCCCCCCCCC---CCCCCChhHHHHHHHHHHHHh-CCCcEEEEEeC
Q 020916 65 VVVLVHG--FAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSIT---DEADRSPTFQAQCLATGLAKL-GVDKCVLVGFS 138 (320)
Q Consensus 65 ~vv~lhG--~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~---~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvGhS 138 (320)
+|+|+|| ++++.. .|..+++.|...+.|+++|+||+|.+.. .....+++.+++++.+.++.+ ..++++|+|||
T Consensus 91 ~l~~~hg~g~~~~~~-~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~S 169 (319)
T 2hfk_A 91 VLVGCTGTAANGGPH-EFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLLGHA 169 (319)
T ss_dssp EEEEECCCCTTCSTT-TTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEEEEET
T ss_pred cEEEeCCCCCCCcHH-HHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9999998 677777 9999999998779999999999999721 223478899999999998877 45789999999
Q ss_pred hhHHHHHHHHHhCc----cccccEEEecccccccccccccccccccccccccccCcCcHHHH-HHHHhHhhhccccCCch
Q 020916 139 YGGMVSFKVAELYP----NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGL-KALLSVATYKKLWFPSC 213 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 213 (320)
+||.+|+.+|.+.+ ++|++++++++........ ...+ ...+ ...+.. .....
T Consensus 170 ~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~----~~~~-------------~~~l~~~~~~~------~~~~~ 226 (319)
T 2hfk_A 170 GGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP----IEVW-------------SRQLGEGLFAG------ELEPM 226 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH----HHHT-------------HHHHHHHHHHT------CSSCC
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH----HHHH-------------HHHhhHHHHHh------hcccc
Confidence 99999999998874 4699999999865321110 0000 0000 001100 00000
Q ss_pred hHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhCCCCeEEEEecCCCccc
Q 020916 214 LYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLGADHVTFQGIKKAGHLV 292 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~ 292 (320)
.... ...+ ..+...+. . .....+++|+++++| +|..++... ...+.+..+ .+.+++.++ +||+.
T Consensus 227 ~~~~-~~~~-------~~~~~~~~--~--~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~-~~~~~~~v~-g~H~~ 291 (319)
T 2hfk_A 227 SDAR-LLAM-------GRYARFLA--G--PRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWD-LPHTVADVP-GDHFT 291 (319)
T ss_dssp CHHH-HHHH-------HHHHHHHH--S--CCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCS-SCSEEEEES-SCTTH
T ss_pred chHH-HHHH-------HHHHHHHH--h--CCCCCcCCCEEEEEc-CCCCCCccccccchhhcCC-CCCEEEEeC-CCcHH
Confidence 0001 0000 00111110 1 124778999999999 998887654 444444443 367899999 59997
Q ss_pred cc-CChHHHHHHHHHHHHhhhhc
Q 020916 293 HL-ERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 293 ~~-~~~~~~~~~i~~fl~~~~~~ 314 (320)
++ ++++++++.|.+||++....
T Consensus 292 ~~~e~~~~~~~~i~~~L~~~~~~ 314 (319)
T 2hfk_A 292 MMRDHAPAVAEAVLSWLDAIEGI 314 (319)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHC-
T ss_pred HHHHhHHHHHHHHHHHHHhcCCC
Confidence 54 79999999999999887643
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-21 Score=155.50 Aligned_cols=215 Identities=10% Similarity=0.030 Sum_probs=131.3
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhc--cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-hCCCcEEE
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTK--KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-LGVDKCVL 134 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~l 134 (320)
++.|+||++||.+ ++.. .|..++..|.. .+.|+++|+|+.+....+ ...++..+.+..+.+. ++.++++|
T Consensus 78 ~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~---~~~~D~~~a~~~l~~~~~d~~ri~l 153 (322)
T 3fak_A 78 QAGKAILYLHGGGYVMGSIN-THRSMVGEISRASQAAALLLDYRLAPEHPFP---AAVEDGVAAYRWLLDQGFKPQHLSI 153 (322)
T ss_dssp CTTCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTSEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCccEEEEEcCCccccCChH-HHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC---cHHHHHHHHHHHHHHcCCCCceEEE
Confidence 4679999999976 4555 77888888876 399999999987654322 2234444444444444 44568999
Q ss_pred EEeChhHHHHHHHHHhCccc----cccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 135 VGFSYGGMVSFKVAELYPNL----VQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+|||+||.+|+.++.+.+++ ++++|+++|............ . . .......
T Consensus 154 ~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~-~-~------------------------~~~~~~~ 207 (322)
T 3fak_A 154 SGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFK-T-R------------------------AEADPMV 207 (322)
T ss_dssp EEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHH-H-T------------------------TTTCCSC
T ss_pred EEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHH-H-h------------------------CccCccc
Confidence 99999999999999887775 899999998764322111000 0 0 0000111
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCC
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKA 288 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 288 (320)
.......+...+.............+ ...+..+ .|+|+++|+.|.++ +....+.+.+. +..+++++++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~sp~-----~~~~~~~-pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~ 279 (322)
T 3fak_A 208 APGGINKMAARYLNGADAKHPYASPN-----FANLKGL-PPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDDM 279 (322)
T ss_dssp CSSHHHHHHHHHHTTSCTTCTTTCGG-----GSCCTTC-CCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred CHHHHHHHHHHhcCCCCCCCcccCCC-----cccccCC-ChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 11222222222221110000000111 0112222 39999999999874 44555555543 246899999999
Q ss_pred Cccccc-----CChHHHHHHHHHHHHhhhh
Q 020916 289 GHLVHL-----ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 289 gH~~~~-----~~~~~~~~~i~~fl~~~~~ 313 (320)
+|.+.. +..+++.+.+.+||++.-.
T Consensus 280 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3fak_A 280 IHVWHAFHPMLPEGKQAIVRVGEFMREQWA 309 (322)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred eeehhhccCCCHHHHHHHHHHHHHHHHHHh
Confidence 998763 3468889999999988654
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=160.25 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-DKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~ 139 (320)
+++++|||+||++++.. .|..+++.|. ++|+++|+++. ....+++++++++.+.++.+.. ++++|+||||
T Consensus 22 ~~~~~l~~~hg~~~~~~-~~~~~~~~L~--~~v~~~d~~~~------~~~~~~~~~a~~~~~~i~~~~~~~~~~l~GhS~ 92 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTT-VFHSLASRLS--IPTYGLQCTRA------APLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSY 92 (283)
T ss_dssp SSSCCEEEECCTTCCSG-GGHHHHHHCS--SCEEEECCCTT------SCCSCHHHHHHHHHHHHTTTCCSSCCEEEEETH
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHhcC--ceEEEEecCCC------CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 46789999999999999 9999999997 99999999742 2346899999999999998864 7899999999
Q ss_pred hHHHHHHHHHhC---ccccc---cEEEeccccc
Q 020916 140 GGMVSFKVAELY---PNLVQ---AMVVSGSILA 166 (320)
Q Consensus 140 Gg~~a~~~a~~~---p~~v~---~lvl~~~~~~ 166 (320)
||.+|+.+|.+. |+++. +++++++.+.
T Consensus 93 Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~~ 125 (283)
T 3tjm_A 93 GACVAFEMCSQLQAQQSPAPTHNSLFLFDGSPT 125 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCCEEEEESCCTT
T ss_pred hHHHHHHHHHHHHHcCCCCCccceEEEEcCCch
Confidence 999999999866 78888 9999998653
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-21 Score=151.24 Aligned_cols=242 Identities=14% Similarity=0.071 Sum_probs=142.5
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccH-HHHHHHhhcc-ceEEecCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTW-QFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~-~~~~~~l~~~-~~vi~~d~~ 99 (320)
.+.+.+|.+++++.+.. +.+|+||++||++ ++.. .| ..+.+.+.+. ++|+++|+|
T Consensus 8 ~~~~~~~~~~~~y~p~~-------------------~~~p~iv~~HGGg~~~g~~~-~~~~~~~~~l~~~g~~Vi~vdYr 67 (274)
T 2qru_A 8 NQTLANGATVTIYPTTT-------------------EPTNYVVYLHGGGMIYGTKS-DLPEELKELFTSNGYTVLALDYL 67 (274)
T ss_dssp EEECTTSCEEEEECCSS-------------------SSCEEEEEECCSTTTSCCGG-GCCHHHHHHHHTTTEEEEEECCC
T ss_pred cccccCCeeEEEEcCCC-------------------CCCcEEEEEeCccccCCChh-hchHHHHHHHHHCCCEEEEeCCC
Confidence 45555788888876542 2678999999988 5554 44 5667778776 999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHH---hCccccccEEEecccccccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAE---LYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~---~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
+.+. ..+...++|+.++++.+. .++++|+|+|+||.+|+.++. ..+.++++++++.+........
T Consensus 68 laPe-------~~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~ 140 (274)
T 2qru_A 68 LAPN-------TKIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIK 140 (274)
T ss_dssp CTTT-------SCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGG
T ss_pred CCCC-------CCCcHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccC
Confidence 7542 255666777777776653 689999999999999999997 3567899999887654311000
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHH-HHHhcChhhHHHHhhhh-----hccCCC-CC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL-EVMFANRKERAELLEGL-----LISNKD-PT 244 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~-~~ 244 (320)
.... ............. ............... ...+. ........ .+...- ...... ..
T Consensus 141 ~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 206 (274)
T 2qru_A 141 EPRK---LLKQAISAKEIAA-------IDQTKPVWDDPFLSR-YLLYHYSIQQALLP---HFYGLPENGDWSAYALSDET 206 (274)
T ss_dssp SCCC---SCSSCCCSGGGTT-------SCCSSCCSCCTTCTT-HHHHHHHHHTTCHH---HHHTCCTTSCCGGGCCCHHH
T ss_pred Cchh---hccccccHHHHhh-------hcccCCCCCCccccc-hhhhhhhhhhcchh---hccCcccccccccCCCChhh
Confidence 0000 0000000000000 000000000000000 00000 00000000 000000 000000 12
Q ss_pred CCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH----HHHHHHHHHHHh
Q 020916 245 VPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC----AYNRCLKQFLAS 310 (320)
Q Consensus 245 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~ 310 (320)
+..+ .|+++++|+.|+.++...++.+.+.++ ++++++++|++|.++.+.+. ++.+.+.+||++
T Consensus 207 l~~l-pP~li~~G~~D~~~~~~~~~~l~~~~~--~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 207 LKTF-PPCFSTASSSDEEVPFRYSKKIGRTIP--ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HHTS-CCEEEEEETTCSSSCTHHHHHHHHHST--TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred hcCC-CCEEEEEecCCCCcCHHHHHHHHHhCC--CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 3344 699999999999999888999999988 88999999999998765443 557778888864
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-22 Score=153.05 Aligned_cols=201 Identities=10% Similarity=0.114 Sum_probs=133.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~ 139 (320)
+.+++|||+||++++.. .|..+++.|...++|+++|+||++ .+++++.+.++.+. .++++|+||||
T Consensus 20 ~~~~~l~~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~~------------~~~~~~~~~i~~~~~~~~~~l~GhS~ 86 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFGI-YFKDLALQLNHKAAVYGFHFIEED------------SRIEQYVSRITEIQPEGPYVLLGYSA 86 (244)
T ss_dssp CCSSEEEEECCTTCCGG-GGHHHHHHTTTTSEEEEECCCCST------------THHHHHHHHHHHHCSSSCEEEEEETH
T ss_pred CCCCCEEEECCCCCCHH-HHHHHHHHhCCCceEEEEcCCCHH------------HHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 36789999999999999 999999999877999999999873 34677788888875 57899999999
Q ss_pred hHHHHHHHHHhC---ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHH
Q 020916 140 GGMVSFKVAELY---PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 140 Gg~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
||.+|+.+|.+. ++++.++|++++...... ........ .+. ..+.+....
T Consensus 87 Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~------~~~~~~~~-----------~~~----------~~~~~~~~~ 139 (244)
T 2cb9_A 87 GGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQS------ITADTEND-----------DSA----------AYLPEAVRE 139 (244)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSC------CCCC----------------------------CCSCHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCccEEEEEcCCCCccc------ccccccHH-----------HHH----------HHhHHHHHH
Confidence 999999999876 467999999997653110 00000000 000 000111111
Q ss_pred HHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecC--CCCCCCHHHHHHHHHHhCCCCeEEEEecCCCc--cc
Q 020916 217 DFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGE--DDQIFNVELAHNMKEQLGADHVTFQGIKKAGH--LV 292 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~--~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~ 292 (320)
.+.... ..+..+... ......+++|+++++|+ +|.+ +++....+.+..+ .+.+++.++| || ++
T Consensus 140 ~~~~~~--------~~~~~~~~~--~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~-~~~~~~~i~g-gH~~~~ 206 (244)
T 2cb9_A 140 TVMQKK--------RCYQEYWAQ--LINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAE-EGYAEYTGYG-AHKDML 206 (244)
T ss_dssp HHTHHH--------HHHHHHHHH--CCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBS-SCEEEEECSS-BGGGTT
T ss_pred HHHHHH--------HHHHHHHHh--hccCCCcCCCEEEEEccCccccc-cccchhHHHHhcC-CCCEEEEecC-ChHHHc
Confidence 110000 000011000 12456789999999999 8874 4444444555544 4689999996 99 66
Q ss_pred ccCChHHHHHHHHHHHHhhhhc
Q 020916 293 HLERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 293 ~~~~~~~~~~~i~~fl~~~~~~ 314 (320)
..++++.+++.|.+||.+....
T Consensus 207 ~~~~~~~~~~~i~~~L~~~~~~ 228 (244)
T 2cb9_A 207 EGEFAEKNANIILNILDKINSD 228 (244)
T ss_dssp SHHHHHHHHHHHHHHHHTC---
T ss_pred ChHHHHHHHHHHHHHHhcCccC
Confidence 6678999999999999876543
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-23 Score=184.50 Aligned_cols=229 Identities=11% Similarity=0.087 Sum_probs=149.3
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHH--HHHHHhhcc-ceEEe
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQ--FQVGALTKK-YSVYI 95 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~--~~~~~l~~~-~~vi~ 95 (320)
.+...+...|| ++.++...++..+ ..+..|+||++||++++.. ..|. .....|++. |.|++
T Consensus 468 ~~~~~~~~~~g-~l~~~~~~P~~~~-------------~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~ 533 (723)
T 1xfd_A 468 VEYRDIEIDDY-NLPMQILKPATFT-------------DTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVK 533 (723)
T ss_dssp CCBCCEEETTE-EECCBEEBCSSCC-------------SSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEC
T ss_pred ceEEEEEcCCc-eEEEEEEeCCCCC-------------CCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEE
Confidence 45555666678 8888777653211 1135689999999987631 1332 455677755 99999
Q ss_pred cCCCCCCCCCCC-----CCCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhC----ccccccEEE
Q 020916 96 PDLLFFGGSITD-----EADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELY----PNLVQAMVV 160 (320)
Q Consensus 96 ~d~~G~G~s~~~-----~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl 160 (320)
+|+||+|.+... .... .....+|+.+.++.+ +.++++|+|||+||.+++.++.++ |++++++|+
T Consensus 534 ~d~rG~g~~g~~~~~~~~~~~-~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~ 612 (723)
T 1xfd_A 534 CDGRGSGFQGTKLLHEVRRRL-GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSA 612 (723)
T ss_dssp CCCTTCSSSHHHHHHTTTTCT-TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEE
T ss_pred ECCCCCccccHHHHHHHHhcc-CcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEE
Confidence 999999985211 1111 112344555555443 235799999999999999999999 999999999
Q ss_pred ecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccC
Q 020916 161 SGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240 (320)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (320)
+++....... . ..+... .. ........ .+....
T Consensus 613 ~~~~~~~~~~---------------------~-~~~~~~---~~-~~~~~~~~---------------------~~~~~~ 645 (723)
T 1xfd_A 613 LSPITDFKLY---------------------A-SAFSER---YL-GLHGLDNR---------------------AYEMTK 645 (723)
T ss_dssp ESCCCCTTSS---------------------B-HHHHHH---HH-CCCSSCCS---------------------STTTTC
T ss_pred ccCCcchHHh---------------------h-hhccHh---hc-CCccCChh---------------------HHHhcC
Confidence 9876532110 0 000000 00 00000000 000000
Q ss_pred CCCCCCCCC-CcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccc-ccCChHHHHHHHHHHHHhh
Q 020916 241 KDPTVPNFP-QRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLV-HLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 241 ~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~ 311 (320)
....+.+++ +|+|+++|++|..+|++..+.+.+.+. ..++++++++++||.+ ..+.++++.+.+.+||++.
T Consensus 646 ~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~ 720 (723)
T 1xfd_A 646 VAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 720 (723)
T ss_dssp THHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred hhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHH
Confidence 001235677 799999999999999999888888774 2367999999999998 5677899999999999764
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-21 Score=150.78 Aligned_cols=193 Identities=14% Similarity=0.102 Sum_probs=128.6
Q ss_pred CCCeEEEEcCCCCCccccHH----HHHHHhhc-cceEEecCCC---------------------CCCCCCCCC------C
Q 020916 62 SKPVVVLVHGFAAEGIVTWQ----FQVGALTK-KYSVYIPDLL---------------------FFGGSITDE------A 109 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~----~~~~~l~~-~~~vi~~d~~---------------------G~G~s~~~~------~ 109 (320)
.+|+|||+||++++.. .|. .+.+.|.+ .|+|+++|+| |+|.+.... .
T Consensus 4 ~~~~vl~lHG~g~~~~-~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~ 82 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGK-VFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISH 82 (243)
T ss_dssp CCCEEEEECCTTCCHH-HHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGG
T ss_pred cCceEEEeCCCCccHH-HHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcc
Confidence 5789999999999998 876 46677777 4999999999 445442111 1
Q ss_pred CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc------ccccEEEecccccccccccccccccccccc
Q 020916 110 DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN------LVQAMVVSGSILAMTDSINETNLNRLGVSS 183 (320)
Q Consensus 110 ~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
..++...++.+.+.++..+ .+++|+||||||.+|+.+|.+++. .++.++++++........ .
T Consensus 83 ~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~-----------~ 150 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP-----------E 150 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT-----------T
T ss_pred hhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc-----------c
Confidence 1355666777777766554 578999999999999999987542 355666655433110000 0
Q ss_pred cccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCC
Q 020916 184 SSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIF 263 (320)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 263 (320)
.... ...... +. .....+..+++|+++++|++|.++
T Consensus 151 -----~~~~---------------~~~~~~------------------~~------~~~~~~~~~~~P~l~i~G~~D~~v 186 (243)
T 1ycd_A 151 -----HPGE---------------LRITEK------------------FR------DSFAVKPDMKTKMIFIYGASDQAV 186 (243)
T ss_dssp -----STTC---------------EEECGG------------------GT------TTTCCCTTCCCEEEEEEETTCSSS
T ss_pred -----cccc---------------cccchh------------------HH------HhccCcccCCCCEEEEEeCCCCcc
Confidence 0000 000000 00 001134668899999999999999
Q ss_pred CHHHHHHHHHHhCCC-----CeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 264 NVELAHNMKEQLGAD-----HVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 264 ~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
|.+.++.+.+.++.. ....++++++||++..+ +.+.+.|.+||++...
T Consensus 187 p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 187 PSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp CHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHHHHHHHHhhh
Confidence 999999888887611 02556677889987655 4589999999988654
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=160.46 Aligned_cols=237 Identities=15% Similarity=0.070 Sum_probs=140.3
Q ss_pred cCCCceE--EEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhcc--c
Q 020916 19 AGVQPHA--VEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKK--Y 91 (320)
Q Consensus 19 ~~~~~~~--~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~ 91 (320)
.+++.+. +...||..+.++.+.+. .+..|+||++||.+ ++.. .|..++..|... +
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~-----------------~~~~p~vv~~HGgG~~~g~~~-~~~~~~~~la~~~g~ 117 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAA-----------------PTPAPVVVYCHAGGFALGNLD-TDHRQCLELARRARC 117 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECS-----------------CSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTS
T ss_pred CcceEEEEEecCCCCCeEEEEEEecC-----------------CCCCcEEEEECCCcCccCChH-HHHHHHHHHHHHcCC
Confidence 3454444 44446767777666542 13678999999877 5666 788888888754 9
Q ss_pred eEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH---HhCC--CcEEEEEeChhHHHHHHHHHhCcc----ccccEEEec
Q 020916 92 SVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA---KLGV--DKCVLVGFSYGGMVSFKVAELYPN----LVQAMVVSG 162 (320)
Q Consensus 92 ~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~---~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~ 162 (320)
.|+++|+|+.+....+. ..++..+.+..+.+ .+++ ++++|+|||+||.+|+.++.+.++ .+.++++++
T Consensus 118 ~vv~~dyr~~p~~~~p~---~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~ 194 (317)
T 3qh4_A 118 AVVSVDYRLAPEHPYPA---ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQ 194 (317)
T ss_dssp EEEEECCCCTTTSCTTH---HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEES
T ss_pred EEEEecCCCCCCCCCch---HHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEEC
Confidence 99999999776543221 12222222222222 2443 489999999999999999988766 389999999
Q ss_pred ccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC
Q 020916 163 SILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD 242 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (320)
|....... . . .... .............+...+..... ........ ..
T Consensus 195 p~~~~~~~-~-~-~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~----~~ 241 (317)
T 3qh4_A 195 PVLDDRPT-A-S-RSEF-------------------------RATPAFDGEAASLMWRHYLAGQT-PSPESVPG----RR 241 (317)
T ss_dssp CCCCSSCC-H-H-HHHT-------------------------TTCSSSCHHHHHHHHHHHHTTCC-CCTTTCGG----GC
T ss_pred ceecCCCC-c-C-HHHh-------------------------cCCCCcCHHHHHHHHHHhcCCCC-CCcccCCC----cc
Confidence 87643210 0 0 0000 00001111111112222211110 00000000 00
Q ss_pred CCCCCCCCcEEEEecCCCCCCC--HHHHHHHHHHhCCCCeEEEEecCCCcccc-----cCChHHHHHHHHHHHHhhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFN--VELAHNMKEQLGADHVTFQGIKKAGHLVH-----LERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-----~~~~~~~~~~i~~fl~~~~ 312 (320)
..+.. -.|+++++|+.|.+++ ....+.+.+... ++++++++|++|.+. .+.++++.+.+.+||++..
T Consensus 242 ~~l~~-lpP~li~~G~~D~~~~~~~~~a~~l~~~g~--~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l 315 (317)
T 3qh4_A 242 GQLAG-LPATLITCGEIDPFRDEVLDYAQRLLGAGV--STELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAF 315 (317)
T ss_dssp SCCTT-CCCEEEEEEEESTTHHHHHHHHHHHHHTTC--CEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHH
T ss_pred cccCC-CCceeEEecCcCCCchhHHHHHHHHHHcCC--CEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHh
Confidence 11111 1389999999999976 334445555444 899999999999843 4566889999999998754
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.88 E-value=9e-22 Score=151.66 Aligned_cols=208 Identities=15% Similarity=0.136 Sum_probs=133.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-DKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~ 139 (320)
+.+++|+|+||++++.. .|..+++.|.+ ++|+++|+||+|. .++++.++++.+.. ++++++|||+
T Consensus 15 ~~~~~l~~~hg~~~~~~-~~~~~~~~l~~-~~v~~~d~~g~~~------------~~~~~~~~i~~~~~~~~~~l~G~S~ 80 (230)
T 1jmk_C 15 DQEQIIFAFPPVLGYGL-MYQNLSSRLPS-YKLCAFDFIEEED------------RLDRYADLIQKLQPEGPLTLFGYSA 80 (230)
T ss_dssp TCSEEEEEECCTTCCGG-GGHHHHHHCTT-EEEEEECCCCSTT------------HHHHHHHHHHHHCCSSCEEEEEETH
T ss_pred CCCCCEEEECCCCCchH-HHHHHHHhcCC-CeEEEecCCCHHH------------HHHHHHHHHHHhCCCCCeEEEEECH
Confidence 35689999999999999 99999999988 9999999999864 35677777777764 5799999999
Q ss_pred hHHHHHHHHHhCc---cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHH
Q 020916 140 GGMVSFKVAELYP---NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 140 Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
||.+|+.+|.+.+ +++++++++++....... .. ... ..... +....................
T Consensus 81 Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~---~~-~~~--------~~~~~---~~~~~~~~~~~~~~~~~~~~~ 145 (230)
T 1jmk_C 81 GCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVS---DL-DGR--------TVESD---VEALMNVNRDNEALNSEAVKH 145 (230)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------------------CC---HHHHHHHTTTCSGGGSHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCccEEEEECCCCCCccc---cc-ccc--------cHHHH---HHHHHhcChhhhhhhhHHHHH
Confidence 9999999998764 579999999876532110 00 000 00000 111111000000000111111
Q ss_pred HHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCc--cccc
Q 020916 217 DFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH--LVHL 294 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH--~~~~ 294 (320)
.+.... .....+... ......+++|+++++|++|..++ .....+.+... .+.+++.++| || ++..
T Consensus 146 ~~~~~~--------~~~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~~~-~~~~~~~i~g-~H~~~~~~ 212 (230)
T 1jmk_C 146 GLKQKT--------HAFYSYYVN--LISTGQVKADIDLLTSGADFDIP-EWLASWEEATT-GAYRMKRGFG-THAEMLQG 212 (230)
T ss_dssp HHHHHH--------HHHHHHHHH--CCCCSCBSSEEEEEECSSCCCCC-TTEECSGGGBS-SCEEEEECSS-CGGGTTSH
T ss_pred HHHHHH--------HHHHHHhhh--ccccccccccEEEEEeCCCCCCc-cccchHHHhcC-CCeEEEEecC-ChHHHcCc
Confidence 111000 001111000 12456789999999999999887 32333444443 4689999997 99 7777
Q ss_pred CChHHHHHHHHHHHHh
Q 020916 295 ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~ 310 (320)
++++.+++.|.+||.+
T Consensus 213 ~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 213 ETLDRNAGILLEFLNT 228 (230)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHHHHhh
Confidence 7889999999999864
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-21 Score=152.91 Aligned_cols=218 Identities=16% Similarity=0.146 Sum_probs=134.9
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH---HHHHhhcc-ceEEecCCCCCCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF---QVGALTKK-YSVYIPDLLFFGGSI 105 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G~s~ 105 (320)
+|..+.++.+.++... .++.|+||++||++++.. .|.. +.+.+.+. +.|+++|.+|+|.|.
T Consensus 25 ~g~~~~~~v~~P~~~~--------------~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~ 89 (278)
T 3e4d_A 25 LKSEMTFAVYVPPKAI--------------HEPCPVVWYLSGLTCTHA-NVMEKGEYRRMASELGLVVVCPDTSPRGNDV 89 (278)
T ss_dssp TTEEEEEEEEECGGGG--------------TSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred cCCcceEEEEcCCCCC--------------CCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEecCCcccCccc
Confidence 5777777666543210 246789999999999988 8876 34555554 999999999999885
Q ss_pred CCC-CC---------------------CC-hhHHHHHHHHHHHHh-CC--CcEEEEEeChhHHHHHHHHHhCccccccEE
Q 020916 106 TDE-AD---------------------RS-PTFQAQCLATGLAKL-GV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159 (320)
Q Consensus 106 ~~~-~~---------------------~~-~~~~~~~l~~~l~~~-~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 159 (320)
... .. .. .+..++++.+.++.. +. ++++|+|||+||.+|+.++.++|+++++++
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 169 (278)
T 3e4d_A 90 PDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCS 169 (278)
T ss_dssp CCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEE
T ss_pred ccccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEE
Confidence 432 00 01 223455677777755 55 789999999999999999999999999999
Q ss_pred EecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhcc
Q 020916 160 VSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLIS 239 (320)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (320)
++++........ .....+...+.. . .... ...........
T Consensus 170 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~----~----~~~~---------~~~~~~~~~~~---- 209 (278)
T 3e4d_A 170 AFAPIVAPSSAD-------------------WSEPALEKYLGA----D----RAAW---------RRYDACSLVED---- 209 (278)
T ss_dssp EESCCSCGGGCT-------------------TTHHHHHHHHCS----C----GGGG---------GGGCHHHHHHT----
T ss_pred EeCCcccccCCc-------------------cchhhHHHhcCC----c----HHHH---------HhcChhhHhhc----
Confidence 999865422110 000011111100 0 0000 00000011111
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 240 NKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 240 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+ ...+|+++++|++|.+++... .+.+.+.+. +.++++++++|++|.... -+...+.+.+|+.+
T Consensus 210 -----~-~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~ 275 (278)
T 3e4d_A 210 -----G-ARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDHSYYF--ISTFMDDHLKWHAE 275 (278)
T ss_dssp -----T-CCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred -----C-CCCCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCcCHHH--HHHHHHHHHHHHHH
Confidence 1 135699999999999987532 455555554 235789999999997542 12344444455544
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-22 Score=178.78 Aligned_cols=230 Identities=12% Similarity=0.049 Sum_probs=148.4
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHH-HHHHHhh-cc-ceEEecC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQ-FQVGALT-KK-YSVYIPD 97 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~-~~~~~l~-~~-~~vi~~d 97 (320)
...+...| .+++++...++..+ ..+..|+||++||++++.. ..|. .+...|. +. |.|+++|
T Consensus 470 ~~~~~~~~-~~l~~~~~~P~~~~-------------~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d 535 (719)
T 1z68_A 470 IKKLEVDE-ITLWYKMILPPQFD-------------RSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVD 535 (719)
T ss_dssp EEEEEETT-EEEEEEEEECTTCC-------------SSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEE
T ss_pred EEEEecCC-eEEEEEEEeCCCCC-------------CCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEc
Confidence 34445544 88888776653211 1135678999999987642 1332 3445553 44 9999999
Q ss_pred CCCCCCCCCCCC----CCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 98 LLFFGGSITDEA----DRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 98 ~~G~G~s~~~~~----~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
+||+|.+..... ...-....+|+.++++.+ +.++++++|||+||.+++.++.++|++++++|++++....
T Consensus 536 ~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~ 615 (719)
T 1z68_A 536 GRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSW 615 (719)
T ss_dssp CTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCT
T ss_pred CCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccCh
Confidence 999999863210 011123455666555554 2357999999999999999999999999999999886532
Q ss_pred cccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC
Q 020916 168 TDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN 247 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (320)
... ...+.. .. ...... ......+. .......+.+
T Consensus 616 ~~~----------------------~~~~~~---~~-~g~~~~-~~~~~~~~------------------~~~~~~~~~~ 650 (719)
T 1z68_A 616 EYY----------------------ASVYTE---RF-MGLPTK-DDNLEHYK------------------NSTVMARAEY 650 (719)
T ss_dssp TTS----------------------BHHHHH---HH-HCCSST-TTTHHHHH------------------HTCSGGGGGG
T ss_pred HHh----------------------ccccch---hh-cCCccc-ccchhhhh------------------hCCHhHHHhc
Confidence 110 000000 00 000000 00000000 0111123456
Q ss_pred CCC-cEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 248 FPQ-RVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 248 ~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+++ |+|+++|++|..++++..+.+.+.++ ...+++++++++||.+..++++++.+.|.+||++.
T Consensus 651 ~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 717 (719)
T 1z68_A 651 FRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQC 717 (719)
T ss_dssp GTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHHh
Confidence 777 89999999999999999888888775 23568999999999996677899999999999875
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-22 Score=178.73 Aligned_cols=232 Identities=13% Similarity=0.050 Sum_probs=148.8
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHH-HHHHHhh-cc-ceEEecC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQ-FQVGALT-KK-YSVYIPD 97 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~-~~~~~l~-~~-~~vi~~d 97 (320)
...+ ..||.++.++...++.-+ ..+..|+||++||++++.. ..|. .+...|. +. |.|+++|
T Consensus 476 ~~~~-~~dg~~l~~~~~~P~~~~-------------~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D 541 (740)
T 4a5s_A 476 LDFI-ILNETKFWYQMILPPHFD-------------KSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFD 541 (740)
T ss_dssp EEEE-EETTEEEEEEEEECTTCC-------------TTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEEC
T ss_pred EEEE-ccCCeEEEEEEEeCCCCC-------------CCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEc
Confidence 3344 348999999877664311 1235689999999987631 1232 2334454 34 9999999
Q ss_pred CCCCCCCCCCCC----CCChhHHHHHHHHHHHHh---C---CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 98 LLFFGGSITDEA----DRSPTFQAQCLATGLAKL---G---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 98 ~~G~G~s~~~~~----~~~~~~~~~~l~~~l~~~---~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
+||+|.+..... ........+|+.++++.+ + .+++.|+|||+||.+++.++.++|++++++|++++....
T Consensus 542 ~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~ 621 (740)
T 4a5s_A 542 GRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRW 621 (740)
T ss_dssp CTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCG
T ss_pred CCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccch
Confidence 999997643210 011112345555555544 2 267999999999999999999999999999999876531
Q ss_pred cccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC
Q 020916 168 TDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN 247 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (320)
.... ..+.. ... ... ........+. .......+.+
T Consensus 622 ~~~~----------------------~~~~~---~~~-~~p-~~~~~~~~~~------------------~~~~~~~~~~ 656 (740)
T 4a5s_A 622 EYYD----------------------SVYTE---RYM-GLP-TPEDNLDHYR------------------NSTVMSRAEN 656 (740)
T ss_dssp GGSB----------------------HHHHH---HHH-CCS-STTTTHHHHH------------------HSCSGGGGGG
T ss_pred HHhh----------------------hHHHH---HHc-CCC-CccccHHHHH------------------hCCHHHHHhc
Confidence 1000 00000 000 000 0001111110 0111123456
Q ss_pred CCC-cEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccc-ccCChHHHHHHHHHHHHhhhh
Q 020916 248 FPQ-RVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLV-HLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 248 ~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+++ |+|+++|++|..++.+....+.+.+. ..+++++++++++|.+ ..+.++.+.+.+.+||++...
T Consensus 657 i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 726 (740)
T 4a5s_A 657 FKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726 (740)
T ss_dssp GGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcC
Confidence 676 99999999999999999888888775 2367899999999998 566789999999999988654
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.4e-21 Score=150.41 Aligned_cols=220 Identities=15% Similarity=0.160 Sum_probs=132.8
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHH---HHHhhcc-ceEEecCCCCCCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQ---VGALTKK-YSVYIPDLLFFGGSI 105 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~---~~~l~~~-~~vi~~d~~G~G~s~ 105 (320)
+|..+.++++-++..+ ..++.|+||++||++++.. .|... ...+.+. +.|+++|.+++|.+.
T Consensus 27 ~g~~~~~~v~~P~~~~-------------~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~ 92 (280)
T 3i6y_A 27 LNCAMRFAIYLPPQAS-------------TGAKVPVLYWLSGLTCSDE-NFMQKAGAQRLAAELGIAIVAPDTSPRGEGV 92 (280)
T ss_dssp TTEEEEEEEEECGGGG-------------TTCCEEEEEEECCTTCCSS-HHHHHSCCHHHHHHHTCEEEEECSSCCSTTC
T ss_pred cCCeeEEEEEeCCCCC-------------CCCCccEEEEecCCCCChh-HHhhcccHHHHHhhCCeEEEEeCCccccccc
Confidence 6777777666553211 1246789999999999888 77663 4455555 999999999887654
Q ss_pred CCCCC---------------------CC-hhHHHHHHHHHHHH-hCC-CcEEEEEeChhHHHHHHHHHhCccccccEEEe
Q 020916 106 TDEAD---------------------RS-PTFQAQCLATGLAK-LGV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVS 161 (320)
Q Consensus 106 ~~~~~---------------------~~-~~~~~~~l~~~l~~-~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 161 (320)
..... .. .+...+++..+++. ... ++++|+|||+||.+|+.++.++|+++++++++
T Consensus 93 ~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 172 (280)
T 3i6y_A 93 ADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAF 172 (280)
T ss_dssp CCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEE
T ss_pred CcccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEe
Confidence 32210 01 23345677777744 344 78999999999999999999999999999999
Q ss_pred cccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCC
Q 020916 162 GSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNK 241 (320)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (320)
++........ .....+...+. .. .... ...........
T Consensus 173 s~~~~~~~~~-------------------~~~~~~~~~~~----~~----~~~~---------~~~~~~~~~~~------ 210 (280)
T 3i6y_A 173 SPINNPVNCP-------------------WGQKAFTAYLG----KD----TDTW---------REYDASLLMRA------ 210 (280)
T ss_dssp SCCCCGGGSH-------------------HHHHHHHHHHC----SC----GGGT---------GGGCHHHHHHH------
T ss_pred CCccccccCc-------------------hHHHHHHHhcC----Cc----hHHH---------HhcCHHHHHHh------
Confidence 9865321100 00000011100 00 0000 00000001111
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
+. -.+|+++++|++|.+++.+. .+.+.+.+. ..++++++++|++|.... ...+.+.+.+|+.+.
T Consensus 211 ---~~-~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~~ 277 (280)
T 3i6y_A 211 ---AK-QYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYYF--IASFIEDHLRFHSNY 277 (280)
T ss_dssp ---CS-SCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred ---cC-CCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHHH--HHHhHHHHHHHHHhh
Confidence 11 15799999999999988643 444444432 246899999999997532 233444455555543
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.1e-21 Score=169.06 Aligned_cols=237 Identities=13% Similarity=0.066 Sum_probs=150.3
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
...+...||.++.++...++... ..++.|+||++||.++... ..|......|.+. |.|+++|+||
T Consensus 419 ~~~~~~~dg~~i~~~~~~p~~~~-------------~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 485 (695)
T 2bkl_A 419 QVFYASKDGTKVPMFVVHRKDLK-------------RDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRG 485 (695)
T ss_dssp EEEEECTTSCEEEEEEEEETTCC-------------CSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTT
T ss_pred EEEEECCCCCEEEEEEEECCCCC-------------CCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCC
Confidence 34445558889998876553211 1246799999999765443 2455555555555 9999999999
Q ss_pred CCCCCCC---CCC-CChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 101 FGGSITD---EAD-RSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 101 ~G~s~~~---~~~-~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
+|.+... ... .......+|+.++++.+ +.++++++|||+||.+++.++.++|++++++|+.++.......
T Consensus 486 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~ 565 (695)
T 2bkl_A 486 GGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRY 565 (695)
T ss_dssp SSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTG
T ss_pred CCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhc
Confidence 8876421 111 12233456666666665 3468999999999999999999999999999999876543211
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCC-
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFP- 249 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (320)
.. . ......... +.. +.. ... .. .+.. ......+..++
T Consensus 566 ~~------~----------~~~~~~~~~------~g~---~~~-~~~-~~-----------~~~~---~sp~~~~~~~~~ 604 (695)
T 2bkl_A 566 HL------F----------GSGRTWIPE------YGT---AEK-PED-FK-----------TLHA---YSPYHHVRPDVR 604 (695)
T ss_dssp GG------S----------TTGGGGHHH------HCC---TTS-HHH-HH-----------HHHH---HCGGGCCCSSCC
T ss_pred cc------c----------CCCcchHHH------hCC---CCC-HHH-HH-----------HHHh---cChHhhhhhcCC
Confidence 00 0 000000000 000 000 000 00 0000 11112344444
Q ss_pred -CcEEEEecCCCCCCCHHHHHHHHHHhCC-----CCeEEEEecCCCcccc--cCChHHHHHHHHHHHHhhhh
Q 020916 250 -QRVHLLWGEDDQIFNVELAHNMKEQLGA-----DHVTFQGIKKAGHLVH--LERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 250 -~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~--~~~~~~~~~~i~~fl~~~~~ 313 (320)
+|+|+++|++|..+++.....+.+.+.. ..+++++++++||... .+++.+..+.+.+||.+...
T Consensus 605 ~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 676 (695)
T 2bkl_A 605 YPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLD 676 (695)
T ss_dssp CCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 6999999999999999999998888752 2488999999999974 34566778889999987643
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-20 Score=168.76 Aligned_cols=235 Identities=13% Similarity=0.030 Sum_probs=141.6
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
...+...||.++.++...++.. .++.|+||++||.++... ..|......|.+. |.|+++|+||
T Consensus 463 ~~~~~~~dg~~i~~~~~~p~~~---------------~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG 527 (741)
T 1yr2_A 463 QVFYPSKDGTKVPMFIVRRKDA---------------KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRG 527 (741)
T ss_dssp EEEEECTTSCEEEEEEEEETTC---------------CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTT
T ss_pred EEEEEcCCCCEEEEEEEecCCC---------------CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCC
Confidence 3344455888998887665210 246799999999876554 2455556666666 9999999999
Q ss_pred CCCCCCCC---CC-CChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 101 FGGSITDE---AD-RSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 101 ~G~s~~~~---~~-~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
+|.+.... .. .......+|+.++++.+ +.++++++|||+||.+++.++.++|++++++|+..+.......
T Consensus 528 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~ 607 (741)
T 1yr2_A 528 GGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRF 607 (741)
T ss_dssp SSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSG
T ss_pred CCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccc
Confidence 98863211 01 11122344555555444 4468999999999999999999999999999998876532210
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC-CC
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN-FP 249 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 249 (320)
.. . ......... +.. +. .. +.... +........+.. ++
T Consensus 608 ~~------~----------~~~~~~~~~------~g~---~~-~~-~~~~~--------------~~~~sp~~~~~~~~~ 646 (741)
T 1yr2_A 608 DQ------F----------TAGRYWVDD------YGY---PE-KE-ADWRV--------------LRRYSPYHNVRSGVD 646 (741)
T ss_dssp GG------S----------TTGGGGHHH------HCC---TT-SH-HHHHH--------------HHTTCGGGCCCTTSC
T ss_pred cC------C----------CCCchhHHH------cCC---CC-CH-HHHHH--------------HHHcCchhhhhccCC
Confidence 00 0 000000000 000 00 00 00000 011111124454 77
Q ss_pred C-cEEEEecCCCCCCCHHHHHHHHHHhCC-----CCeEEEEecCCCcccccC--ChHHHHHHHHHHHHhhhh
Q 020916 250 Q-RVHLLWGEDDQIFNVELAHNMKEQLGA-----DHVTFQGIKKAGHLVHLE--RPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 250 ~-P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~~ 313 (320)
+ |+|+++|++|..+++.....+.+.++. ..+++++++++||.+... +..++.+.+.+||.+...
T Consensus 647 ~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 647 YPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFTG 718 (741)
T ss_dssp CCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 5 999999999999999998888887751 238899999999997654 335788899999987653
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.6e-21 Score=170.40 Aligned_cols=236 Identities=13% Similarity=0.045 Sum_probs=147.4
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhc-c-ceEEecCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTK-K-YSVYIPDLLF 100 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~-~-~~vi~~d~~G 100 (320)
..+...||.++.++...++... ..++.|+||++||.++... ..|......|.+ . |.|+++|+||
T Consensus 440 ~~~~~~dg~~i~~~~~~p~~~~-------------~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG 506 (710)
T 2xdw_A 440 IFYPSKDGTKIPMFIVHKKGIK-------------LDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRG 506 (710)
T ss_dssp EEEECTTSCEEEEEEEEETTCC-------------CSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTT
T ss_pred EEEEcCCCCEEEEEEEecCCCC-------------CCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCC
Confidence 3444558989998776553211 1246799999999876554 234444445544 4 9999999999
Q ss_pred CCCCCCCC----CCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 101 FGGSITDE----ADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 101 ~G~s~~~~----~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
+|.+.... .........+|+.++++.+ +.++++++|||+||.+++.++.++|++++++|+.++.......
T Consensus 507 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~ 586 (710)
T 2xdw_A 507 GGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKF 586 (710)
T ss_dssp SSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTG
T ss_pred CCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhc
Confidence 98764211 0011122344555555544 3468999999999999999999999999999999876532211
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCC----
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVP---- 246 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 246 (320)
... . ... ..... +... ...+.. .++.. ......+.
T Consensus 587 ~~~---------~-----~~~--~~~~~------~g~~-~~~~~~-~~~~~-----------------~sp~~~~~~~~~ 625 (710)
T 2xdw_A 587 HKY---------T-----IGH--AWTTD------YGCS-DSKQHF-EWLIK-----------------YSPLHNVKLPEA 625 (710)
T ss_dssp GGS---------T-----TGG--GGHHH------HCCT-TSHHHH-HHHHH-----------------HCGGGCCCCCSS
T ss_pred ccc---------C-----CCh--hHHHh------CCCC-CCHHHH-HHHHH-----------------hCcHhhhccccc
Confidence 000 0 000 00000 0000 000000 00000 01111233
Q ss_pred -CCCC-cEEEEecCCCCCCCHHHHHHHHHHhC---------CCCeEEEEecCCCcccccC--ChHHHHHHHHHHHHhhhh
Q 020916 247 -NFPQ-RVHLLWGEDDQIFNVELAHNMKEQLG---------ADHVTFQGIKKAGHLVHLE--RPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 247 -~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~~ 313 (320)
.+++ |+|+++|++|..+++.....+.+.++ +..+++++++++||.+... ++.++.+.+.+||.+...
T Consensus 626 ~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 626 DDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp TTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 5776 99999999999999988888777664 1346899999999998763 356788899999987653
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-21 Score=155.77 Aligned_cols=200 Identities=15% Similarity=0.069 Sum_probs=129.2
Q ss_pred CCCCeEEEEcCCCCCcccc-HH-HHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEe
Q 020916 61 PSKPVVVLVHGFAAEGIVT-WQ-FQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~-~~-~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGh 137 (320)
+.+++|||+||++++.. . |. .+.+.|.+. |+|+++|+||||.++.. ...+++.+.+..+++..+.++++||||
T Consensus 29 ~~~~~VvllHG~~~~~~-~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~---~~~~~l~~~i~~~~~~~g~~~v~lVGh 104 (317)
T 1tca_A 29 SVSKPILLVPGTGTTGP-QSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ---VNTEYMVNAITALYAGSGNNKLPVLTW 104 (317)
T ss_dssp SCSSEEEEECCTTCCHH-HHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH---HHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCCeEEEECCCCCCcc-hhhHHHHHHHHHhCCCEEEEECCCCCCCCcHH---HHHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 35688999999999988 6 88 899999886 99999999999876421 123445556666666677789999999
Q ss_pred ChhHHHHHHHHHhCc---cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchh
Q 020916 138 SYGGMVSFKVAELYP---NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCL 214 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (320)
||||.++..++..+| ++|+++|+++++........ ....+ . .....
T Consensus 105 S~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~--~~~~~------~----------------------~~~~~- 153 (317)
T 1tca_A 105 SQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAG--PLDAL------A----------------------VSAPS- 153 (317)
T ss_dssp THHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGH--HHHHT------T----------------------CBCHH-
T ss_pred ChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchh--hhhhh------h----------------------hcCch-
Confidence 999999999998876 78999999998653221100 00000 0 00000
Q ss_pred HHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH--HHHHHHHhCCCCeEEEEe-------
Q 020916 215 YKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL--AHNMKEQLGADHVTFQGI------- 285 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~------- 285 (320)
.. ..... ..+...+.... . ....+|+++|+|+.|.++++.. .+.....++ +.+.+.+
T Consensus 154 ---~~-~~~~~----s~f~~~L~~~~-~---~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~--~a~~~~~~~~~~~~ 219 (317)
T 1tca_A 154 ---VW-QQTTG----SALTTALRNAG-G---LTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLF--NGKNVQAQAVCGPL 219 (317)
T ss_dssp ---HH-HTBTT----CHHHHHHHHTT-T---TBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCB--TSEEEEHHHHHCTT
T ss_pred ---HH-hhCcC----cHHHHHHHhcC-C---CCCCCCEEEEEeCCCCeECCccccccchhhhcc--CCccEEeeeccCCC
Confidence 00 00000 00111111000 0 1136899999999999988664 222223333 3343443
Q ss_pred cCCCcccccCChHHHHHHHHHHHHh
Q 020916 286 KKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 286 ~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++.||..+.++|+. .+.|.+||+.
T Consensus 220 ~~~gH~~~l~~p~~-~~~v~~~L~~ 243 (317)
T 1tca_A 220 FVIDHAGSLTSQFS-YVVGRSALRS 243 (317)
T ss_dssp CCCCTTHHHHBHHH-HHHHHHHHHC
T ss_pred CccCcccccCCHHH-HHHHHHHhcC
Confidence 47899999999885 4678899987
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-22 Score=158.92 Aligned_cols=103 Identities=19% Similarity=0.120 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCCCCc---cccHHHHHHHhhccc---eEEecCCCCCCCCCCCCC--CCChhHHHHHHHHHHHHhC-C-Cc
Q 020916 62 SKPVVVLVHGFAAEG---IVTWQFQVGALTKKY---SVYIPDLLFFGGSITDEA--DRSPTFQAQCLATGLAKLG-V-DK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~---~~~~~~~~~~l~~~~---~vi~~d~~G~G~s~~~~~--~~~~~~~~~~l~~~l~~~~-~-~~ 131 (320)
..++|||+||++++. . .|..+++.|.+.+ +|+++|+ |||.|..... ..++...++++.+.++.+. . ++
T Consensus 4 ~~~pvVllHG~~~~~~~~~-~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 81 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPL-SMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQG 81 (279)
T ss_dssp SSCCEEEECCTTCCSCCTT-TTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTC
T ss_pred CCCcEEEECCCCCCCCCcc-cHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCC
Confidence 456799999999887 7 8999999998755 9999998 9998752211 1356666777777776532 1 68
Q ss_pred EEEEEeChhHHHHHHHHHhCccc-cccEEEeccccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNL-VQAMVVSGSILA 166 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~ 166 (320)
+++|||||||.++..++.++|++ |+++|+++++..
T Consensus 82 ~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~~ 117 (279)
T 1ei9_A 82 YNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQ 117 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCCTT
T ss_pred EEEEEECHHHHHHHHHHHHcCCcccceEEEecCccC
Confidence 99999999999999999999984 999999987643
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7e-20 Score=150.35 Aligned_cols=216 Identities=13% Similarity=0.054 Sum_probs=127.4
Q ss_pred CCCCeEEEEcCCCCC---cc-ccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-------
Q 020916 61 PSKPVVVLVHGFAAE---GI-VTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~---~~-~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------- 127 (320)
+..|+||++||.+.. .. ..|..++..|+.. +.|+++|+|+.+... .....+|+.+.++.+
T Consensus 110 ~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~-------~~~~~~D~~~a~~~l~~~~~~~ 182 (365)
T 3ebl_A 110 EPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHR-------YPCAYDDGWTALKWVMSQPFMR 182 (365)
T ss_dssp SCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-------TTHHHHHHHHHHHHHHHCTTTE
T ss_pred CcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCC-------CcHHHHHHHHHHHHHHhCchhh
Confidence 356899999997632 22 1377888888764 999999999765332 223345555554433
Q ss_pred ---CCC-cEEEEEeChhHHHHHHHHHhCcc---ccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHH
Q 020916 128 ---GVD-KCVLVGFSYGGMVSFKVAELYPN---LVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALL 200 (320)
Q Consensus 128 ---~~~-~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (320)
+.+ +++|+|||+||.+|+.++.+.++ +++++|+++|............ .
T Consensus 183 ~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~----------------------~-- 238 (365)
T 3ebl_A 183 SGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESER----------------------R-- 238 (365)
T ss_dssp ETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHH----------------------H--
T ss_pred hCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhh----------------------h--
Confidence 344 89999999999999999988776 7999999998764322111000 0
Q ss_pred hHhhhccccCCchhHHHHHHHHhcChhhHH-HHhhhhhccCCCCCCCCCC-CcEEEEecCCCCCCCHHHHHHHHHHhC--
Q 020916 201 SVATYKKLWFPSCLYKDFLEVMFANRKERA-ELLEGLLISNKDPTVPNFP-QRVHLLWGEDDQIFNVELAHNMKEQLG-- 276 (320)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 276 (320)
..............+...+........ .....+ ......+..+. .|+|+++|++|.+++. ...+.+.+.
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~l~~~~~pP~Li~~G~~D~l~~~--~~~~~~~L~~~ 311 (365)
T 3ebl_A 239 ---LDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPF--GPNGRRLGGLPFAKSLIIVSGLDLTCDR--QLAYADALRED 311 (365)
T ss_dssp ---HTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTT--STTCCCCTTSCCCCEEEEEETTSTTHHH--HHHHHHHHHHT
T ss_pred ---cCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCC--CCcchhhccCCCCCEEEEEcCcccchhH--HHHHHHHHHHC
Confidence 000001111111111111111000000 000000 00112233222 4899999999977643 344444432
Q ss_pred CCCeEEEEecCCCcccc----cCChHHHHHHHHHHHHhhhhc
Q 020916 277 ADHVTFQGIKKAGHLVH----LERPCAYNRCLKQFLASLHAD 314 (320)
Q Consensus 277 ~~~~~~~~~~~~gH~~~----~~~~~~~~~~i~~fl~~~~~~ 314 (320)
+..+++++++|++|.++ .++.+++.+.|.+||++....
T Consensus 312 g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~ 353 (365)
T 3ebl_A 312 GHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYY 353 (365)
T ss_dssp TCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC-
T ss_pred CCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhc
Confidence 24789999999999876 355678999999999987644
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.7e-21 Score=149.72 Aligned_cols=177 Identities=22% Similarity=0.209 Sum_probs=122.4
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc---ceEEecCCC------CCCCCCCCC---CCC-------ChhHHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK---YSVYIPDLL------FFGGSITDE---ADR-------SPTFQAQCLA 121 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~---~~vi~~d~~------G~G~s~~~~---~~~-------~~~~~~~~l~ 121 (320)
+..|.|||+||+|++.. .|..+++.|... +.+++++-| |.|.+-... ... .....++++.
T Consensus 64 ~~~plVI~LHG~G~~~~-~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~ 142 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGA-DLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLD 142 (285)
T ss_dssp CCSEEEEEECCTTBCHH-HHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHH-HHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHH
Confidence 35688999999999988 898888888764 677877644 333321000 000 1112234454
Q ss_pred HHHHH----hC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHH
Q 020916 122 TGLAK----LG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKG 195 (320)
Q Consensus 122 ~~l~~----~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (320)
++++. .+ .++++|+|+|+||.+++.++.++|+++.++|.+++......
T Consensus 143 ~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~-------------------------- 196 (285)
T 4fhz_A 143 AFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPE-------------------------- 196 (285)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHH--------------------------
T ss_pred HHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCch--------------------------
Confidence 54443 33 35799999999999999999999999999998876431000
Q ss_pred HHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHh
Q 020916 196 LKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL 275 (320)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 275 (320)
. ... ....+.|++++||++|+++|.+..+.+.+.+
T Consensus 197 ---------------------~-~~~-----------------------~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L 231 (285)
T 4fhz_A 197 ---------------------R-LAE-----------------------EARSKPPVLLVHGDADPVVPFADMSLAGEAL 231 (285)
T ss_dssp ---------------------H-HHH-----------------------HCCCCCCEEEEEETTCSSSCTHHHHHHHHHH
T ss_pred ---------------------h-hhh-----------------------hhhhcCcccceeeCCCCCcCHHHHHHHHHHH
Confidence 0 000 0123568999999999999999888877766
Q ss_pred C--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 276 G--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 276 ~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
. +.++++++++|.||.+. +++ .+.+.+||++..+
T Consensus 232 ~~~g~~~~~~~y~g~gH~i~---~~~-l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 232 AEAGFTTYGHVMKGTGHGIA---PDG-LSVALAFLKERLP 267 (285)
T ss_dssp HHTTCCEEEEEETTCCSSCC---HHH-HHHHHHHHHHHCC
T ss_pred HHCCCCEEEEEECCCCCCCC---HHH-HHHHHHHHHHHCc
Confidence 4 34789999999999863 444 4578899988654
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-19 Score=141.75 Aligned_cols=123 Identities=16% Similarity=0.166 Sum_probs=87.6
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH---HHHHhhcc-ceEEecCCCCCCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF---QVGALTKK-YSVYIPDLLFFGGSI 105 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G~s~ 105 (320)
+|.++.++.+-++..+ ..+..|+||++||++++.. .|.. +.+.+.+. +.|+++|.+++|.+.
T Consensus 25 ~g~~~~~~v~~P~~~~-------------~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~ 90 (280)
T 3ls2_A 25 THCTMRFAVFLPPGAS-------------ESNKVPVLYWLSGLTCTDE-NFMQKAGAFKKAAELGIAIVAPDTSPRGDNV 90 (280)
T ss_dssp TTEEEEEEEEECTTCB-------------TTBCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTS
T ss_pred cCCceEEEEEcCCCCC-------------CCCCcCEEEEeCCCCCChh-hhhcchhHHHHHhhCCeEEEEeCCccccccc
Confidence 5777777666543211 1235789999999999888 7765 44555555 999999998777653
Q ss_pred CCCCC---------------------CC-hhHHHHHHHHHHHHh-CC-CcEEEEEeChhHHHHHHHHHhCccccccEEEe
Q 020916 106 TDEAD---------------------RS-PTFQAQCLATGLAKL-GV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVS 161 (320)
Q Consensus 106 ~~~~~---------------------~~-~~~~~~~l~~~l~~~-~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 161 (320)
..... .. .+...+++..+++.. .. ++++|+|||+||.+|+.++.++|+++++++++
T Consensus 91 ~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~ 170 (280)
T 3ls2_A 91 PNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAF 170 (280)
T ss_dssp CCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEE
T ss_pred ccccccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEe
Confidence 22100 01 233455666666654 22 67999999999999999999999999999999
Q ss_pred ccccc
Q 020916 162 GSILA 166 (320)
Q Consensus 162 ~~~~~ 166 (320)
++...
T Consensus 171 s~~~~ 175 (280)
T 3ls2_A 171 SPIVN 175 (280)
T ss_dssp SCCSC
T ss_pred cCccC
Confidence 88653
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.4e-19 Score=156.62 Aligned_cols=237 Identities=13% Similarity=-0.013 Sum_probs=148.5
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHH-HHhhcc-ceEEecCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQV-GALTKK-YSVYIPDLL 99 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~-~~l~~~-~~vi~~d~~ 99 (320)
...+...||.+|+++...++..+ ..++.|+||++||.++... ..|.... +.|.++ |.|+.+|+|
T Consensus 451 ~v~~~s~DG~~i~~~l~~P~~~~-------------~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~R 517 (711)
T 4hvt_A 451 QKEATSFDGVKIPYFLVYKKGIK-------------FDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIR 517 (711)
T ss_dssp EEEEECTTSCEEEEEEEEETTCC-------------CSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCT
T ss_pred EEEEECCCCeEEEEEEEecCCCC-------------CCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCC
Confidence 33455568999998877653221 1246899999999865543 2343333 366666 999999999
Q ss_pred CCCCCCCCC----CCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccc
Q 020916 100 FFGGSITDE----ADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTD 169 (320)
Q Consensus 100 G~G~s~~~~----~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 169 (320)
|+|.+.... .........+|+.+.++.+ +.+++.++|+|+||.+++.++.++|++++++|...+......
T Consensus 518 Gsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~ 597 (711)
T 4hvt_A 518 GGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIR 597 (711)
T ss_dssp TSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTT
T ss_pred CCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhh
Confidence 998764211 1111222344555555544 235799999999999999999999999999998887654321
Q ss_pred cccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCC
Q 020916 170 SINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFP 249 (320)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (320)
... .......... +.... .++ ..+++. .......+.+++
T Consensus 598 ~~~----------------~~~~~~~~~~------~G~p~-~~~-~~~~l~-----------------~~SP~~~v~~i~ 636 (711)
T 4hvt_A 598 YKE----------------FGAGHSWVTE------YGDPE-IPN-DLLHIK-----------------KYAPLENLSLTQ 636 (711)
T ss_dssp GGG----------------STTGGGGHHH------HCCTT-SHH-HHHHHH-----------------HHCGGGSCCTTS
T ss_pred hhc----------------cccchHHHHH------hCCCc-CHH-HHHHHH-----------------HcCHHHHHhhcC
Confidence 100 0000000000 00000 000 000111 111222455666
Q ss_pred C--cEEEEecCCCCCCCHHHHHHHHHHh-C--CCCeEEEEecCCCcccccC--ChHHHHHHHHHHHHhhhh
Q 020916 250 Q--RVHLLWGEDDQIFNVELAHNMKEQL-G--ADHVTFQGIKKAGHLVHLE--RPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 250 ~--P~l~i~g~~D~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~~ 313 (320)
+ |+|+++|++|..+|+.....+.+.+ . +..+++++++++||.+... +.....+.+.+||.+...
T Consensus 637 ~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 637 KYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALK 707 (711)
T ss_dssp CCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhC
Confidence 6 9999999999999999999998888 4 2468999999999987543 234556677899987643
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-20 Score=147.10 Aligned_cols=122 Identities=16% Similarity=0.152 Sum_probs=85.7
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHH---HHHhhcc-ceEEecCC--CCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQ---VGALTKK-YSVYIPDL--LFFGG 103 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~---~~~l~~~-~~vi~~d~--~G~G~ 103 (320)
+|..+.+..+-++... .++.|+||++||++++.. .|... .+.+.+. +.|+++|+ ||+|.
T Consensus 26 ~~~~~~~~v~~P~~~~--------------~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~ 90 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAE--------------TGKCPALYWLSGLTCTEQ-NFISKSGYHQSASEHGLVVIAPDTSPRGCNI 90 (282)
T ss_dssp TTEEEEEEEEECGGGG--------------TSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEEECSCSSCCCC
T ss_pred cCCeeEEEEEcCCCCC--------------CCCCCEEEEEcCCCCCcc-chhhcchHHHHhhcCCeEEEEeccccCcccc
Confidence 5667777665543211 135789999999999888 78765 5667666 99999999 76665
Q ss_pred CCCC-------------CCC-C-------ChhHHHHHHHHHHH-HhCC--CcEEEEEeChhHHHHHHHHHhCccccccEE
Q 020916 104 SITD-------------EAD-R-------SPTFQAQCLATGLA-KLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159 (320)
Q Consensus 104 s~~~-------------~~~-~-------~~~~~~~~l~~~l~-~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 159 (320)
+... ... . .....++++..+++ .++. ++++|+|||+||.+|+.++.++|+++++++
T Consensus 91 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v 170 (282)
T 3fcx_A 91 KGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVS 170 (282)
T ss_dssp --------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEE
T ss_pred ccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEE
Confidence 3321 000 0 11223456666666 4443 679999999999999999999999999999
Q ss_pred Eeccccc
Q 020916 160 VSGSILA 166 (320)
Q Consensus 160 l~~~~~~ 166 (320)
++++...
T Consensus 171 ~~s~~~~ 177 (282)
T 3fcx_A 171 AFAPICN 177 (282)
T ss_dssp EESCCCC
T ss_pred EeCCccC
Confidence 9988653
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=166.87 Aligned_cols=238 Identities=14% Similarity=0.057 Sum_probs=142.1
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
...+...||.+|.++...++... ..++.|+||++||..+... ..|......|.+. |.|+++|+||
T Consensus 427 ~~~~~~~dg~~i~~~l~~p~~~~-------------~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG 493 (693)
T 3iuj_A 427 QRFYQSKDGTRVPLIISYRKGLK-------------LDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRG 493 (693)
T ss_dssp EEEEECTTSCEEEEEEEEESSCC-------------CSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTT
T ss_pred EEEEecCCCcEEEEEEEecCCCC-------------CCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCC
Confidence 33445558888888776553211 1246799999999765433 2555556666666 9999999999
Q ss_pred CCCCCCCC---C-CCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 101 FGGSITDE---A-DRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 101 ~G~s~~~~---~-~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
.|...... . ........+|+.++++.+ +.++++++|||+||.+++.++.++|++++++|+..+.......
T Consensus 494 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~ 573 (693)
T 3iuj_A 494 GGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRY 573 (693)
T ss_dssp SSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTG
T ss_pred CCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhh
Confidence 88653211 0 011112234444444443 2368999999999999999999999999999998876542211
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC-CC
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN-FP 249 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 249 (320)
.. ... .. ..... +... ........++..+ .....+.. ++
T Consensus 574 ~~------~~~----------~~-~~~~~-----~g~p-~~~~~~~~~~~~~-----------------sp~~~~~~~~~ 613 (693)
T 3iuj_A 574 HT------FTA----------GT-GWAYD-----YGTS-ADSEAMFDYLKGY-----------------SPLHNVRPGVS 613 (693)
T ss_dssp GG------SGG----------GG-GCHHH-----HCCT-TSCHHHHHHHHHH-----------------CHHHHCCTTCC
T ss_pred cc------CCC----------ch-hHHHH-----cCCc-cCHHHHHHHHHhc-----------------CHHHhhcccCC
Confidence 00 000 00 00000 0000 0000000111111 00012444 67
Q ss_pred Cc-EEEEecCCCCCCCHHHHHHHHHHhCC-----CCeEEEEecCCCccccc--CChHHHHHHHHHHHHhhhh
Q 020916 250 QR-VHLLWGEDDQIFNVELAHNMKEQLGA-----DHVTFQGIKKAGHLVHL--ERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 250 ~P-~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~~~~ 313 (320)
+| +|+++|++|..+++.....+.+.+.. ..+++++++++||.+.. ++..+..+.+.+||.+...
T Consensus 614 ~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 685 (693)
T 3iuj_A 614 YPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMG 685 (693)
T ss_dssp CCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcC
Confidence 87 99999999999999998888877751 35689999999999765 4566788889999988654
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-19 Score=142.05 Aligned_cols=203 Identities=17% Similarity=0.107 Sum_probs=127.5
Q ss_pred CCCCeEEEEcCCCCCccccHHH--HHHHhhc-c-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CCC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF--QVGALTK-K-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GVD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~--~~~~l~~-~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~ 130 (320)
++.|+||++||++++.. .|.. .+..+.. . +.|+++|+++++.+..+......+..++++..+++.. +.+
T Consensus 39 ~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 117 (263)
T 2uz0_A 39 EDIPVLYLLHGMSGNHN-SWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKRE 117 (263)
T ss_dssp CCBCEEEEECCTTCCTT-HHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGG
T ss_pred CCCCEEEEECCCCCCHH-HHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCC
Confidence 46789999999999988 8887 4555554 3 8888999998887765433333566678888888874 236
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+++++|||+||.+++.++. +|++++++|++++......... .. . ...........+. ...
T Consensus 118 ~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~-~~-~-----------~~~~~~~~~~~~~----~~~-- 177 (263)
T 2uz0_A 118 KTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSP-ES-Q-----------NLGSPAYWRGVFG----EIR-- 177 (263)
T ss_dssp GEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCG-GG-T-----------TCSCHHHHHHHHC----CCS--
T ss_pred ceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccc-cc-c-----------ccccchhHHHHcC----Chh--
Confidence 7999999999999999999 9999999999998764332100 00 0 0000000111100 000
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC--CCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEec
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF--PQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIK 286 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 286 (320)
.. .. ....... .+.++ .+|+++++|++|.+++ ..+.+.+.+. +.++++++++
T Consensus 178 -~~--------~~-~~~~~~~------------~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~ 233 (263)
T 2uz0_A 178 -DW--------TT-SPYSLES------------LAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYSHSA 233 (263)
T ss_dssp -CT--------TT-STTSHHH------------HGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEEEES
T ss_pred -hh--------cc-ccCCHHH------------HHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEEECC
Confidence 00 00 0000000 01112 2799999999999874 3345555443 2357899999
Q ss_pred CCCcccccCChHHHHHHHHHHHHhh
Q 020916 287 KAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 287 ~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
| ||.... .++..+.+.+||.+.
T Consensus 234 g-~H~~~~--~~~~~~~~~~~l~~~ 255 (263)
T 2uz0_A 234 G-THEWYY--WEKQLEVFLTTLPID 255 (263)
T ss_dssp C-CSSHHH--HHHHHHHHHHHSSSC
T ss_pred C-CcCHHH--HHHHHHHHHHHHHhh
Confidence 9 997542 234556777777654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-20 Score=165.18 Aligned_cols=239 Identities=12% Similarity=0.059 Sum_probs=144.2
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhcc-ceEEecCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
..+...||.++.++...++... ..++.|+||++||.++... ..|......|.+. |.|+++|+||+
T Consensus 483 ~~~~s~dG~~i~~~l~~p~~~~-------------~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~ 549 (751)
T 2xe4_A 483 RFATAPDQTKIPLSVVYHKDLD-------------MSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGG 549 (751)
T ss_dssp EEEECTTCCEEEEEEEEETTSC-------------TTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTS
T ss_pred EEEECCCCcEEEEEEEcCCCCC-------------CCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCC
Confidence 3444558888887665432211 1246799999999876543 2455566677666 99999999999
Q ss_pred CCCCCC----CC-----CCChhHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccc
Q 020916 102 GGSITD----EA-----DRSPTFQAQCLATGLAK--LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDS 170 (320)
Q Consensus 102 G~s~~~----~~-----~~~~~~~~~~l~~~l~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 170 (320)
|.+... .. ...++++++.+..+++. .+.++++++|+|+||.+++.++.++|++++++|+.++.......
T Consensus 550 g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~ 629 (751)
T 2xe4_A 550 SELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTT 629 (751)
T ss_dssp CTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHH
T ss_pred CCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhh
Confidence 875321 11 12233344444444443 23468999999999999999999999999999998876532110
Q ss_pred ccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCC
Q 020916 171 INETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQ 250 (320)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (320)
... .. .+. ....+ ..+. .+ .... ... .+........+.++++
T Consensus 630 ~~~--------~~-----~~~----~~~~~--~~~g---~p-~~~~-~~~--------------~~~~~sp~~~~~~~~~ 671 (751)
T 2xe4_A 630 MCD--------PS-----IPL----TTGEW--EEWG---NP-NEYK-YYD--------------YMLSYSPMDNVRAQEY 671 (751)
T ss_dssp HTC--------TT-----STT----HHHHT--TTTC---CT-TSHH-HHH--------------HHHHHCTGGGCCSSCC
T ss_pred hcc--------cC-----ccc----chhhH--HHcC---CC-CCHH-HHH--------------HHHhcChhhhhccCCC
Confidence 000 00 000 00000 0000 00 0000 000 0001111223456788
Q ss_pred c-EEEEecCCCCCCCHHHHHHHHHHhCC-----CCeEEEEecCCCcccccCChH--HHHHHHHHHHHhhhh
Q 020916 251 R-VHLLWGEDDQIFNVELAHNMKEQLGA-----DHVTFQGIKKAGHLVHLERPC--AYNRCLKQFLASLHA 313 (320)
Q Consensus 251 P-~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~~~~ 313 (320)
| +|+++|++|..+++.....+.+.+.. ..+.+.+++++||.+....++ .....+.+||.+...
T Consensus 672 Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 672 PNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLK 742 (751)
T ss_dssp CEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhC
Confidence 7 99999999999999998888877751 123455569999998765444 345578899987653
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-20 Score=155.08 Aligned_cols=103 Identities=19% Similarity=0.104 Sum_probs=74.6
Q ss_pred CCCCeEEEEcCCCCCcccc-----------HHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCC--------ChhHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVT-----------WQFQVGALTKK-YSVYIPDLLFFGGSITDEADR--------SPTFQAQCL 120 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~-----------~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~--------~~~~~~~~l 120 (320)
+..|+||++||++++.. . |..++..|.+. |.|+++|+||||.|......+ ...+.++++
T Consensus 77 ~~~P~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~ 155 (397)
T 3h2g_A 77 GPYPLLGWGHPTEALRA-QEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAA 155 (397)
T ss_dssp SCEEEEEEECCCCCBTT-CCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCCC-cccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHH
Confidence 45688999999998765 4 56778888777 999999999999996443222 233455566
Q ss_pred HHHHHHhCC---CcEEEEEeChhHHHHHHHHHh-Ccc-----ccccEEEeccc
Q 020916 121 ATGLAKLGV---DKCVLVGFSYGGMVSFKVAEL-YPN-----LVQAMVVSGSI 164 (320)
Q Consensus 121 ~~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~-~p~-----~v~~lvl~~~~ 164 (320)
..+++.++. ++++++|||+||.+++.++.. .++ .+.+++..+++
T Consensus 156 ~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 208 (397)
T 3h2g_A 156 RSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGP 208 (397)
T ss_dssp HHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCC
T ss_pred HHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEeccccc
Confidence 677777776 689999999999999988733 232 35555555443
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-19 Score=148.72 Aligned_cols=195 Identities=15% Similarity=0.165 Sum_probs=129.8
Q ss_pred eEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH--HHH--------H--HHhhcc
Q 020916 24 HAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW--QFQ--------V--GALTKK 90 (320)
Q Consensus 24 ~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~--~~~--------~--~~l~~~ 90 (320)
..+... ||.++.|+.+.+..-. ..+..|+||++||++++.. .+ ..+ . ......
T Consensus 147 ~~~~~~~dg~~l~~~v~~P~~~~-------------~~~~~Pvvv~lHG~g~~~~-~~~~~~~~~~g~~~~~~~~~~~~~ 212 (380)
T 3doh_A 147 FTFKDPETGVEIPYRLFVPKDVN-------------PDRKYPLVVFLHGAGERGT-DNYLQVAGNRGAVVWAQPRYQVVH 212 (380)
T ss_dssp EEEECTTTCCEEEEEEECCSSCC-------------TTSCEEEEEEECCGGGCSS-SSSHHHHSSTTTTGGGSHHHHTTS
T ss_pred eeeccCCCCcEEEEEEEcCCCCC-------------CCCCccEEEEECCCCCCCC-chhhhhhccccceeecCccccccC
Confidence 344445 7788888776653211 1135589999999986644 21 111 0 111223
Q ss_pred -ceEEecCCCCCCCCCCCCC--------CCChhHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCccccccEE
Q 020916 91 -YSVYIPDLLFFGGSITDEA--------DRSPTFQAQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159 (320)
Q Consensus 91 -~~vi~~d~~G~G~s~~~~~--------~~~~~~~~~~l~~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 159 (320)
+.|+++|.+|.+....... .....+..+.+..+++..+. ++++|+|||+||.+++.++.++|+++++++
T Consensus 213 ~~~vv~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v 292 (380)
T 3doh_A 213 PCFVLAPQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAI 292 (380)
T ss_dssp CCEEEEECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEE
T ss_pred CEEEEEecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEE
Confidence 7899999997654432111 12334445555556666554 379999999999999999999999999999
Q ss_pred EecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhcc
Q 020916 160 VSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLIS 239 (320)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (320)
++++....
T Consensus 293 ~~sg~~~~------------------------------------------------------------------------ 300 (380)
T 3doh_A 293 PICGGGDV------------------------------------------------------------------------ 300 (380)
T ss_dssp EESCCCCG------------------------------------------------------------------------
T ss_pred EecCCCCh------------------------------------------------------------------------
Confidence 99876300
Q ss_pred CCCCCCCCC-CCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCC--------CcccccCChHHHHH--HHHH
Q 020916 240 NKDPTVPNF-PQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKA--------GHLVHLERPCAYNR--CLKQ 306 (320)
Q Consensus 240 ~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------gH~~~~~~~~~~~~--~i~~ 306 (320)
..+..+ .+|+|+++|++|..+|++..+.+.+.+. +.++++++++++ +|..+ ..... .+.+
T Consensus 301 ---~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~----~~~~~~~~i~~ 373 (380)
T 3doh_A 301 ---SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSW----IPTYENQEAIE 373 (380)
T ss_dssp ---GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTH----HHHHTCHHHHH
T ss_pred ---hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhH----HHhcCCHHHHH
Confidence 001222 3799999999999999988888887775 235899999998 66532 23333 7788
Q ss_pred HHHhh
Q 020916 307 FLASL 311 (320)
Q Consensus 307 fl~~~ 311 (320)
||.+.
T Consensus 374 wL~~~ 378 (380)
T 3doh_A 374 WLFEQ 378 (380)
T ss_dssp HHHTC
T ss_pred HHHhh
Confidence 88764
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=144.76 Aligned_cols=121 Identities=19% Similarity=0.240 Sum_probs=85.3
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEecCCC-------
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIPDLL------- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~d~~------- 99 (320)
.+|.++.++.+.+... .+..|+||++||++++.. .| ..+.+.|.+. |.|+++|+|
T Consensus 35 ~~~~~l~~~~~~P~~~---------------~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~ 98 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGY---------------TPDRPVVVVQHGVLRNGA-DYRDFWIPAADRHKLLIVAPTFSDEIWPGV 98 (304)
T ss_dssp CTTCCEEEEEEECTTC---------------CTTSCEEEEECCTTCCHH-HHHHHTHHHHHHHTCEEEEEECCTTTSCHH
T ss_pred CCCceEEEEEEeCCCC---------------CCCCcEEEEeCCCCCCHH-HHHHHHHHHHHHCCcEEEEeCCccccCCCc
Confidence 3677787765544211 136789999999999988 77 6778888776 999999999
Q ss_pred -----CC--CCCCCCC--CCCChhHHHHHHHHHHHH--hCCCcEEEEEeChhHHHHHHHHHhCcc-ccccEEEecccc
Q 020916 100 -----FF--GGSITDE--ADRSPTFQAQCLATGLAK--LGVDKCVLVGFSYGGMVSFKVAELYPN-LVQAMVVSGSIL 165 (320)
Q Consensus 100 -----G~--G~s~~~~--~~~~~~~~~~~l~~~l~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 165 (320)
|+ |.|..+. .....++..+.+..+.+. ++.++++|+|||+||.+++.++.++|+ +++++|+.+++.
T Consensus 99 ~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 99 ESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp HHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred cccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 65 6665432 122333333333333332 235789999999999999999999995 789999887544
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.1e-20 Score=151.69 Aligned_cols=176 Identities=16% Similarity=0.111 Sum_probs=123.1
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-----------------CC-----------CC
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-----------------AD-----------RS 112 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-----------------~~-----------~~ 112 (320)
..|+|||+||++++.. .|..+++.|+++ |.|+++|+||+|.|.... .. ..
T Consensus 97 ~~P~Vv~~HG~~~~~~-~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 175 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRT-LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQ 175 (383)
T ss_dssp CEEEEEEECCTTCCTT-TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCch-HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHH
Confidence 5688999999999998 999999999988 999999999999875210 00 01
Q ss_pred hhHHHHHHHHHHHHh--------------------------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 113 PTFQAQCLATGLAKL--------------------------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 113 ~~~~~~~l~~~l~~~--------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+...++|+..+++.+ +.+++.++|||+||.+++.++...+ +++++|++++...
T Consensus 176 ~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~~ 254 (383)
T 3d59_A 176 VRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWMF 254 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCT
T ss_pred HHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCccC
Confidence 112245666665543 2347999999999999999988765 6999999886431
Q ss_pred ccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCC
Q 020916 167 MTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVP 246 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (320)
.. .. ..+.
T Consensus 255 p~------------------------------------------~~------------------------------~~~~ 262 (383)
T 3d59_A 255 PL------------------------------------------GD------------------------------EVYS 262 (383)
T ss_dssp TC------------------------------------------CG------------------------------GGGG
T ss_pred CC------------------------------------------ch------------------------------hhhc
Confidence 00 00 0124
Q ss_pred CCCCcEEEEecCCCCCCCHHHHHHHHHHhC-CCCeEEEEecCCCcccccC-------------------Ch----HHHHH
Q 020916 247 NFPQRVHLLWGEDDQIFNVELAHNMKEQLG-ADHVTFQGIKKAGHLVHLE-------------------RP----CAYNR 302 (320)
Q Consensus 247 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~-------------------~~----~~~~~ 302 (320)
++++|+|+++|++|... ...+.+.+... ....++++++|++|..+.+ ++ +.+.+
T Consensus 263 ~i~~P~Lii~g~~D~~~--~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 340 (383)
T 3d59_A 263 RIPQPLFFINSEYFQYP--ANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNK 340 (383)
T ss_dssp SCCSCEEEEEETTTCCH--HHHHHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHH
T ss_pred cCCCCEEEEecccccch--hhHHHHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHH
Confidence 56789999999999753 33333322221 2368899999999987522 34 34456
Q ss_pred HHHHHHHhhhh
Q 020916 303 CLKQFLASLHA 313 (320)
Q Consensus 303 ~i~~fl~~~~~ 313 (320)
.+.+||++...
T Consensus 341 ~~~~Fl~~~L~ 351 (383)
T 3d59_A 341 ASLAFLQKHLG 351 (383)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHcC
Confidence 78889987653
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.1e-19 Score=139.80 Aligned_cols=105 Identities=17% Similarity=0.127 Sum_probs=76.6
Q ss_pred CCCCeEEEEcCCCCCccccHHH---HHHHhhcc-ceEEecCCCCCCCCCC--------------CCC-------CCC-hh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF---QVGALTKK-YSVYIPDLLFFGGSIT--------------DEA-------DRS-PT 114 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G~s~~--------------~~~-------~~~-~~ 114 (320)
+..|+||++||++++.. .|.. +...+.+. +.|+++|.+++|.+.. ... ... .+
T Consensus 49 ~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~ 127 (283)
T 4b6g_A 49 RPLGVIYWLSGLTCTEQ-NFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYD 127 (283)
T ss_dssp CCEEEEEEECCTTCCSH-HHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHH
T ss_pred CCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcccccCccCcccchhhHHH
Confidence 35789999999999888 7743 34555555 9999999874443211 110 011 33
Q ss_pred HHHHHHHHHHHHh--CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 115 FQAQCLATGLAKL--GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 115 ~~~~~l~~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
..++++..+++.. ..++++|+|||+||.+|+.++.++|+++++++++++...
T Consensus 128 ~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 128 YILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp HHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 3456777777766 236899999999999999999999999999999998653
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-18 Score=153.26 Aligned_cols=217 Identities=14% Similarity=0.093 Sum_probs=129.0
Q ss_pred HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC--------------------CcEEEEEeChhH
Q 020916 83 QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV--------------------DKCVLVGFSYGG 141 (320)
Q Consensus 83 ~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~--------------------~~~~lvGhS~Gg 141 (320)
+.+.|.++ |.|+++|.||+|.|......... ..++|+.++++.+.. +++.++|||+||
T Consensus 273 ~~~~la~~GYaVv~~D~RG~G~S~G~~~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG 351 (763)
T 1lns_A 273 LNDYFLTRGFASIYVAGVGTRSSDGFQTSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLG 351 (763)
T ss_dssp HHHHHHTTTCEEEEECCTTSTTSCSCCCTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHH
T ss_pred hHHHHHHCCCEEEEECCCcCCCCCCcCCCCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHH
Confidence 34667777 99999999999999876544443 567889999998862 479999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc------hhH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS------CLY 215 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 215 (320)
.+++.+|..+|++++++|..++........... +...............+... .+...+... ...
T Consensus 352 ~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~-----g~~~~~~g~~~~~~~~l~~~----~~~~~~~~g~~~~~~~~~ 422 (763)
T 1lns_A 352 TMAYGAATTGVEGLELILAEAGISSWYNYYREN-----GLVRSPGGFPGEDLDVLAAL----TYSRNLDGADFLKGNAEY 422 (763)
T ss_dssp HHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSS-----SSBCCCTTCTTCCHHHHHHH----HCGGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcccEEEEEecccccHHHHhhhc-----chhhhcccCCchhhhHHhHH----HHhhhcCcchhhhHHHHH
Confidence 999999999999999999988765221100000 00000000000000000000 000000000 000
Q ss_pred HHHHHHHh----cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCC-CCeEEEEecCCCc
Q 020916 216 KDFLEVMF----ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGA-DHVTFQGIKKAGH 290 (320)
Q Consensus 216 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH 290 (320)
..+...+. ........++. .......+.+|++|+|+|+|.+|..+++..+..+.+.++. ....+ ++.++||
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~w~---~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l-~i~~~gH 498 (763)
T 1lns_A 423 EKRLAEMTAALDRKSGDYNQFWH---DRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHA-FLHRGAH 498 (763)
T ss_dssp HHHHHHHHHHHCTTTCCCCHHHH---TTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEE-EEESCSS
T ss_pred HHHHHHHHhhhhhccCchhHHhh---ccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEE-EEeCCcc
Confidence 00111100 00000001111 1112245678999999999999999999999999999872 12444 4567899
Q ss_pred ccccC-ChHHHHHHHHHHHHhhhh
Q 020916 291 LVHLE-RPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 291 ~~~~~-~~~~~~~~i~~fl~~~~~ 313 (320)
..+.+ .+..+.+.+.+|+++...
T Consensus 499 ~~~~~~~~~~~~~~i~~Ffd~~Lk 522 (763)
T 1lns_A 499 IYMNSWQSIDFSETINAYFVAKLL 522 (763)
T ss_dssp CCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred cCccccchHHHHHHHHHHHHHHhc
Confidence 97655 556678888888887654
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-19 Score=136.61 Aligned_cols=178 Identities=17% Similarity=0.203 Sum_probs=120.6
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc---ceEEecCCCC--------------CCCCCCCC-------CCCChhHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK---YSVYIPDLLF--------------FGGSITDE-------ADRSPTFQ 116 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~---~~vi~~d~~G--------------~G~s~~~~-------~~~~~~~~ 116 (320)
+.+++|||+||+|++.. .|..+++.|... +.+++++-|- +....... ....+...
T Consensus 35 ~~~~~VI~LHG~G~~~~-dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~ 113 (246)
T 4f21_A 35 QARFCVIWLHGLGADGH-DFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSS 113 (246)
T ss_dssp CCCEEEEEEEC--CCCC-CGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHH
T ss_pred cCCeEEEEEcCCCCCHH-HHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHH
Confidence 46789999999999999 888888887653 7788876531 11111000 01223344
Q ss_pred HHHHHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcC
Q 020916 117 AQCLATGLAKL-----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPN 191 (320)
Q Consensus 117 ~~~l~~~l~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
++.+..+++.. ..++++++|+|+||.+++.++.++|+++.+++.+++.........
T Consensus 114 ~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~~------------------- 174 (246)
T 4f21_A 114 IAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNFK------------------- 174 (246)
T ss_dssp HHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHHS-------------------
T ss_pred HHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcccccc-------------------
Confidence 45555555432 346899999999999999999999999999999887542110000
Q ss_pred cHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHH
Q 020916 192 SVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNM 271 (320)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 271 (320)
........++|++++||++|+++|.+..+..
T Consensus 175 -------------------------------------------------~~~~~~~~~~Pvl~~HG~~D~vVp~~~~~~~ 205 (246)
T 4f21_A 175 -------------------------------------------------GKITSINKGLPILVCHGTDDQVLPEVLGHDL 205 (246)
T ss_dssp -------------------------------------------------TTCCGGGTTCCEEEEEETTCSSSCHHHHHHH
T ss_pred -------------------------------------------------ccccccccCCchhhcccCCCCccCHHHHHHH
Confidence 0000011256899999999999999988888
Q ss_pred HHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 272 KEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 272 ~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
.+.+. +.+++++.++|.||... +++ .+.+.+||++.
T Consensus 206 ~~~L~~~g~~v~~~~y~g~gH~i~---~~~-l~~~~~fL~k~ 243 (246)
T 4f21_A 206 SDKLKVSGFANEYKHYVGMQHSVC---MEE-IKDISNFIAKT 243 (246)
T ss_dssp HHHHHTTTCCEEEEEESSCCSSCC---HHH-HHHHHHHHHHH
T ss_pred HHHHHHCCCCeEEEEECCCCCccC---HHH-HHHHHHHHHHH
Confidence 77775 24678999999999764 444 45688999875
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=9e-18 Score=137.29 Aligned_cols=246 Identities=14% Similarity=0.070 Sum_probs=132.2
Q ss_pred CCCCeEEEEcCCCCCccc--c-----HHHHHHHhh-cc-ceEEecCCCCCCCCCCCCCCC-Chh-------HHHHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIV--T-----WQFQVGALT-KK-YSVYIPDLLFFGGSITDEADR-SPT-------FQAQCLATG 123 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~--~-----~~~~~~~l~-~~-~~vi~~d~~G~G~s~~~~~~~-~~~-------~~~~~l~~~ 123 (320)
+..|.|++.||....... . -..++..|. +. |.|+++|+||+|.|......+ ... +.++++..+
T Consensus 72 ~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~ 151 (377)
T 4ezi_A 72 GQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKEL 151 (377)
T ss_dssp SCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHH
Confidence 456899999999753220 1 112344555 55 999999999999998632222 111 122333344
Q ss_pred HHHhCC---CcEEEEEeChhHHHHHHHHHhCcc-----ccccEEEecccccccccccccc----------cc-----ccc
Q 020916 124 LAKLGV---DKCVLVGFSYGGMVSFKVAELYPN-----LVQAMVVSGSILAMTDSINETN----------LN-----RLG 180 (320)
Q Consensus 124 l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~----------~~-----~~~ 180 (320)
++.+++ ++++++|||+||.+++.+|..+|+ .+.+++..+++........... .. ...
T Consensus 152 ~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g 231 (377)
T 4ezi_A 152 ANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQT 231 (377)
T ss_dssp HHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHH
T ss_pred hhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHH
Confidence 454554 689999999999999999988665 4677777776654321100000 00 000
Q ss_pred c----cccccccCcCcHHHHHHHHhHh-------hhccccCCchhHHHHHHHHhc-ChhhHHHHhhhhhccCCCCCCCCC
Q 020916 181 V----SSSSELLLPNSVKGLKALLSVA-------TYKKLWFPSCLYKDFLEVMFA-NRKERAELLEGLLISNKDPTVPNF 248 (320)
Q Consensus 181 ~----~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 248 (320)
. ......+.+.....+....... .........-+...+.+.... ........+... .. .-..+
T Consensus 232 ~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~---~~--~~~~~ 306 (377)
T 4ezi_A 232 YKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRNTEILKINF---NH--YDFKP 306 (377)
T ss_dssp HHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHTTCSTTHHHHHHHH---CC--CCSCC
T ss_pred HHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcccccchHHHHHHHHh---cc--cCCCC
Confidence 0 0000111111111111110000 000000000000111111110 111111111111 11 12357
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecC--CCcccccCChHHHHHHHHHHHHhhhhcc
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKK--AGHLVHLERPCAYNRCLKQFLASLHADE 315 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 315 (320)
++|+++++|++|.++|.+.++.+.+.+. +. ++++.+++ .+|... .......+.+||++...++
T Consensus 307 ~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~---~~~~~~~~~~wl~~~~~~~ 373 (377)
T 4ezi_A 307 TAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQA---HPFVLKEQVDFFKQFERQE 373 (377)
T ss_dssp SSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTT---HHHHHHHHHHHHHHHHTSS
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccCh---HHHHHHHHHHHHHHhhcch
Confidence 8999999999999999999999988875 23 89999998 788653 3566778889998877644
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-19 Score=149.95 Aligned_cols=104 Identities=21% Similarity=0.204 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-c---eEEecCCCCCCCC-----CCC------------------------
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-Y---SVYIPDLLFFGGS-----ITD------------------------ 107 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~---~vi~~d~~G~G~s-----~~~------------------------ 107 (320)
+++++|||+||++++.. .|..+++.|.+. | +|+++|++|||.| +..
T Consensus 20 ~~~ppVVLlHG~g~s~~-~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v 98 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAG-QFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKI 98 (484)
T ss_dssp -CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHH
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccc
Confidence 46789999999999999 999999999987 8 7999999999976 110
Q ss_pred -------CCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCc---cccccEEEecccc
Q 020916 108 -------EADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYP---NLVQAMVVSGSIL 165 (320)
Q Consensus 108 -------~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 165 (320)
......+++++++.++++.++.++++|+||||||.+++.++.++| ++|+++|+++++.
T Consensus 99 ~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 99 LSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 001234456677778888888899999999999999999999998 4899999999875
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.78 E-value=7e-19 Score=122.79 Aligned_cols=100 Identities=19% Similarity=0.190 Sum_probs=84.1
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG 102 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G 102 (320)
.+++.. +|.+++|...+ ++|+|||+| ++.. .|..+ |++.|+|+++|+||||
T Consensus 4 ~~~~~~-~g~~~~~~~~g---------------------~~~~vv~~H---~~~~-~~~~~---l~~~~~v~~~d~~G~G 54 (131)
T 2dst_A 4 AGYLHL-YGLNLVFDRVG---------------------KGPPVLLVA---EEAS-RWPEA---LPEGYAFYLLDLPGYG 54 (131)
T ss_dssp EEEEEE-TTEEEEEEEEC---------------------CSSEEEEES---SSGG-GCCSC---CCTTSEEEEECCTTST
T ss_pred eEEEEE-CCEEEEEEEcC---------------------CCCeEEEEc---CCHH-HHHHH---HhCCcEEEEECCCCCC
Confidence 345666 78999987765 467999999 4455 66666 7667999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCcc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPN 153 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 153 (320)
.|..+... .+++++++.++++.++.++++++|||+||.+++.+|.++|.
T Consensus 55 ~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 55 RTEGPRMA--PEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp TCCCCCCC--HHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CCCCCCCC--HHHHHHHHHHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 99876544 88999999999999999999999999999999999999884
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-18 Score=135.89 Aligned_cols=181 Identities=14% Similarity=0.122 Sum_probs=114.3
Q ss_pred CCCCeEEEEcCCCCCccccHHH-------HHHHhhc-----cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-h
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF-------QVGALTK-----KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-L 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~-------~~~~l~~-----~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-~ 127 (320)
+..|+||++||++++.. .|.. +++.|.+ .+.|+++|.++++.+.........++.++++..+++. .
T Consensus 60 ~~~P~vv~lHG~g~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 138 (268)
T 1jjf_A 60 KKYSVLYLLHGIGGSEN-DWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNY 138 (268)
T ss_dssp SCBCEEEEECCTTCCTT-TTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHS
T ss_pred CCccEEEEECCCCCCcc-hhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccccHHHHHHHHHHHHHHHHHhhc
Confidence 36789999999998765 5533 3666654 3999999999887542110000011224455555543 3
Q ss_pred C----CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHh
Q 020916 128 G----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVA 203 (320)
Q Consensus 128 ~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (320)
. .++++|+|||+||.+++.++.++|+++++++++++....... ...+
T Consensus 139 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~--------------------------~~~~--- 189 (268)
T 1jjf_A 139 SVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN--------------------------ERLF--- 189 (268)
T ss_dssp CBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH--------------------------HHHC---
T ss_pred CCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCch--------------------------hhhc---
Confidence 3 267999999999999999999999999999999875421100 0000
Q ss_pred hhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCC-cEEEEecCCCCCCCHHHHHHHHHHhC--CCCe
Q 020916 204 TYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQ-RVHLLWGEDDQIFNVELAHNMKEQLG--ADHV 280 (320)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~ 280 (320)
..... . ..... |+++++|++|.+++. .+.+.+.+. +.++
T Consensus 190 -------~~~~~------------~-----------------~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~ 231 (268)
T 1jjf_A 190 -------PDGGK------------A-----------------AREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINH 231 (268)
T ss_dssp -------TTTTH------------H-----------------HHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCC
T ss_pred -------Ccchh------------h-----------------hhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCce
Confidence 00000 0 01123 499999999998874 344444432 2468
Q ss_pred EEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 281 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++++++|++|.... .......+.+||.+.
T Consensus 232 ~~~~~~g~~H~~~~--~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 232 VYWLIQGGGHDFNV--WKPGLWNFLQMADEA 260 (268)
T ss_dssp EEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCcCHhH--HHHHHHHHHHHHHhc
Confidence 99999999998642 223345566777654
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.76 E-value=3.7e-18 Score=136.67 Aligned_cols=102 Identities=27% Similarity=0.360 Sum_probs=92.7
Q ss_pred CCCCeEEEEcCCCCCc------cccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEE
Q 020916 61 PSKPVVVLVHGFAAEG------IVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCV 133 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~------~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 133 (320)
+++++|||+||++++. . .|..+.+.|.+. |+|+++|+||+|.|..+ ..+.+++++++.++++.++.++++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~-~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~--~~~~~~l~~~i~~~l~~~~~~~v~ 82 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLE-YWYGIQEDLQQRGATVYVANLSGFQSDDGP--NGRGEQLLAYVKTVLAATGATKVN 82 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEE-SSTTHHHHHHHTTCCEEECCCCSSCCSSST--TSHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCCEEEEECCCCCCccccchHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4688999999999887 6 899999999988 99999999999998653 356788899999999999989999
Q ss_pred EEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 134 LVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
|+|||+||.++..++.++|++|+++|+++++.
T Consensus 83 lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 99999999999999999999999999999864
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-18 Score=135.97 Aligned_cols=104 Identities=15% Similarity=0.139 Sum_probs=85.4
Q ss_pred CCCCCeEEEEcCCCCCc-cccHH-HHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 60 KPSKPVVVLVHGFAAEG-IVTWQ-FQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~-~~~~~-~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
.+.+++|||+||++++. . .|. .+.+.|.+. |+|+++|+||||.++.. ...+++++.+..+++..+.++++|||
T Consensus 62 ~~~~~pVVLvHG~~~~~~~-~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~---~~~~~la~~I~~l~~~~g~~~v~LVG 137 (316)
T 3icv_A 62 SSVSKPILLVPGTGTTGPQ-SFDSNWIPLSAQLGYTPCWISPPPFMLNDTQ---VNTEYMVNAITTLYAGSGNNKLPVLT 137 (316)
T ss_dssp TBCSSEEEEECCTTCCHHH-HHTTTHHHHHHHTTCEEEEECCTTTTCSCHH---HHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCCCCeEEEECCCCCCcHH-HHHHHHHHHHHHCCCeEEEecCCCCCCCcHH---HHHHHHHHHHHHHHHHhCCCceEEEE
Confidence 34778999999999987 6 888 899999887 99999999999976421 23445566677777777888999999
Q ss_pred eChhHHHHHHHHHhC---ccccccEEEecccccc
Q 020916 137 FSYGGMVSFKVAELY---PNLVQAMVVSGSILAM 167 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~~ 167 (320)
|||||.++..++..+ +++|+++|+++++...
T Consensus 138 HSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~G 171 (316)
T 3icv_A 138 WSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 171 (316)
T ss_dssp ETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred ECHHHHHHHHHHHhccccchhhceEEEECCCCCC
Confidence 999999998888776 4799999999987643
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.5e-19 Score=147.80 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=88.5
Q ss_pred CCCCeEEEEcCCCCCc-cccHHH-HHHHhhc--cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----C--CC
Q 020916 61 PSKPVVVLVHGFAAEG-IVTWQF-QVGALTK--KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----G--VD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~-~~~~~~-~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~--~~ 130 (320)
+++|+||++||++++. . .|.. +++.|.+ .|+|+++|++|+|.|..+....+.+.+++++.++++.+ + .+
T Consensus 68 ~~~p~vvliHG~~~~~~~-~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~ 146 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGED-SWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPE 146 (452)
T ss_dssp TTSCEEEEECCTTCCSSS-SHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEEcCCCCCCCc-hHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4689999999999988 6 7887 7777765 49999999999999863322345566788888888887 5 67
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+++|+||||||.+|..+|.++|++|+++|+++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 147 NVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred cEEEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 899999999999999999999999999999988753
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.5e-19 Score=147.80 Aligned_cols=105 Identities=17% Similarity=0.164 Sum_probs=88.4
Q ss_pred CCCCeEEEEcCCCCCc-cccHHH-HHHHhhc--cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CC--C
Q 020916 61 PSKPVVVLVHGFAAEG-IVTWQF-QVGALTK--KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GV--D 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~-~~~~~~-~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~--~ 130 (320)
+++|+||++||++++. . .|.. +++.|.+ .|+|+++|++|+|.|..+....+...+++++.++++.+ +. +
T Consensus 68 ~~~p~vvliHG~~~~~~~-~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~ 146 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGED-GWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (452)
T ss_dssp TTSEEEEEECCSCCTTCT-THHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCc-hHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4689999999999988 6 8888 6677765 49999999999999873322345566788899998888 53 7
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+++|+||||||.+|+.+|.++|++|.++|+++|...
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 147 NVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred ceEEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 899999999999999999999999999999988753
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.75 E-value=6.1e-19 Score=147.18 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=87.2
Q ss_pred CCCCeEEEEcCCCCCc-cccHHH-HHHHhhc--cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----C--CC
Q 020916 61 PSKPVVVLVHGFAAEG-IVTWQF-QVGALTK--KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----G--VD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~-~~~~~~-~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~--~~ 130 (320)
+++|+||++||++++. . .|.. +++.|.+ .++|+++|+||+|.|.......+.+.+++|+.++++.+ + .+
T Consensus 68 ~~~~~vvllHG~~~s~~~-~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~ 146 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGEN-SWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPE 146 (432)
T ss_dssp TTSEEEEEECCTTCCTTS-HHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCeEEEECCCCCCCCc-hHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4688999999999988 5 7877 7888875 49999999999999863322344566678888888877 4 57
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+++|+||||||.+|+.+|.++|+++++++++++..
T Consensus 147 ~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 147 NVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp GEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred cEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 89999999999999999999999999999998765
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-18 Score=143.72 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCCCCccccHHH-HHHHh-h-ccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CCCc
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF-QVGAL-T-KKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GVDK 131 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~-~~~~l-~-~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~~ 131 (320)
+++|+||++||++++....|.. +++.| . ++|+|+++|++|||.|..+....+....++++.++++.+ +.++
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~ 146 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSN 146 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 4678999999999885327876 66766 3 359999999999999853222234555677788888766 4678
Q ss_pred EEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
++||||||||.+|..++.++|++|.++++++|...
T Consensus 147 v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 147 VHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 99999999999999999999999999999998754
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-17 Score=131.99 Aligned_cols=99 Identities=25% Similarity=0.252 Sum_probs=89.0
Q ss_pred CCCCeEEEEcCCCCCc-----cccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEE
Q 020916 61 PSKPVVVLVHGFAAEG-----IVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVL 134 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~-----~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~l 134 (320)
+++++|||+||++++. . .|..+.+.|.+. |+|+++|+||+|.+. .+.+++++++.++++.++.++++|
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~-~~~~~~~~L~~~G~~v~~~d~~g~g~s~-----~~~~~~~~~i~~~~~~~~~~~v~l 78 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVD-YWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSGQPKVNL 78 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEE-SSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCeEEEeCCCCCCccccccc-cHHHHHHHHHhCCCEEEEEeCCCCCCch-----hhHHHHHHHHHHHHHHhCCCCEEE
Confidence 4688999999998864 4 788999999888 999999999999875 456788999999999998889999
Q ss_pred EEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 135 VGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+|||+||.++..++..+|++|+++|+++++.
T Consensus 79 vGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 79 IGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999999999999999999999999854
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.72 E-value=6.8e-18 Score=135.51 Aligned_cols=106 Identities=14% Similarity=0.154 Sum_probs=88.5
Q ss_pred CCCCeEEEEcCCCC----------CccccH----HHHHHHhhcc-ce---EEecCCCCCCCCCCCC----CCCChhHHHH
Q 020916 61 PSKPVVVLVHGFAA----------EGIVTW----QFQVGALTKK-YS---VYIPDLLFFGGSITDE----ADRSPTFQAQ 118 (320)
Q Consensus 61 ~~~~~vv~lhG~~~----------~~~~~~----~~~~~~l~~~-~~---vi~~d~~G~G~s~~~~----~~~~~~~~~~ 118 (320)
..+++|||+||+++ +.. .| ..+++.|.++ |. |+++|++|+|.|..+. .....+++++
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~-~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~ 116 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVS-GYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKT 116 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCT-TTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHH
T ss_pred CCCCeEEEECCcCCCcccccccccccc-cccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHH
Confidence 46678999999998 445 78 8899999886 87 9999999999886542 2234556677
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccccc
Q 020916 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILAM 167 (320)
Q Consensus 119 ~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~~ 167 (320)
++.++++.++.++++||||||||.+++.++.++ |++|+++|+++++...
T Consensus 117 ~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~G 167 (342)
T 2x5x_A 117 FIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIRG 167 (342)
T ss_dssp HHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTTC
T ss_pred HHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCccc
Confidence 777788888889999999999999999999998 8999999999987643
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-16 Score=126.62 Aligned_cols=96 Identities=15% Similarity=0.161 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-DKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~ 139 (320)
+.+++++|+||++++.. .|..+.+.|. +.|+++|+|+ . ....+++.+++++.+.++.+.. ++++++||||
T Consensus 44 ~~~~~l~~~hg~~g~~~-~~~~~~~~l~--~~v~~~~~~~--~----~~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~ 114 (316)
T 2px6_A 44 SSERPLFLVHPIEGSTT-VFHSLASRLS--IPTYGLQCTR--A----APLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSY 114 (316)
T ss_dssp CSSCCEEEECCTTCCSG-GGHHHHHHCS--SCEEEECCCT--T----SCTTCHHHHHHHHHHHHTTTCSSCCCEEEEETH
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHhcC--CCEEEEECCC--C----CCcCCHHHHHHHHHHHHHHhCCCCCEEEEEECH
Confidence 46789999999999999 9999999996 9999999993 1 2246889999999999988864 7899999999
Q ss_pred hHHHHHHHHHhCc---cc---cccEEEecccc
Q 020916 140 GGMVSFKVAELYP---NL---VQAMVVSGSIL 165 (320)
Q Consensus 140 Gg~~a~~~a~~~p---~~---v~~lvl~~~~~ 165 (320)
||.+|+.+|.+.+ ++ +++++++++.+
T Consensus 115 Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 115 GACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 9999999998764 35 89999988764
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-15 Score=120.44 Aligned_cols=103 Identities=21% Similarity=0.227 Sum_probs=76.6
Q ss_pred CCeEEEEcCCC--CCccccHHH---HHHHhhcc-ceEEecCCCCCC-CCCCCCC-CCCh-hHHHHHHHHHHHH-hCCC--
Q 020916 63 KPVVVLVHGFA--AEGIVTWQF---QVGALTKK-YSVYIPDLLFFG-GSITDEA-DRSP-TFQAQCLATGLAK-LGVD-- 130 (320)
Q Consensus 63 ~~~vv~lhG~~--~~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G-~s~~~~~-~~~~-~~~~~~l~~~l~~-~~~~-- 130 (320)
.|+||++||++ ++.. .|.. +.+.+.+. +.|+++|.++.+ .++.... .... +.+++++..+++. ++.+
T Consensus 34 ~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 112 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGLAPG 112 (280)
T ss_dssp SSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSCCCSS
T ss_pred CCEEEEECCCCCCCChh-hhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 48999999995 4555 6765 45666666 999999997542 2221111 1233 3456788888887 6654
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+++|+||||||.+|+.++.++|+++++++++++...
T Consensus 113 ~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 148 (280)
T 1r88_A 113 GHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 148 (280)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred ceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 899999999999999999999999999999988753
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-16 Score=138.36 Aligned_cols=126 Identities=14% Similarity=0.081 Sum_probs=91.6
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCc---c---ccHHH-HH---HHhhcc-ceE
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEG---I---VTWQF-QV---GALTKK-YSV 93 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~---~---~~~~~-~~---~~l~~~-~~v 93 (320)
.+...||.+|+++.+.+.. .+..|+||++||++.+. . ..|.. +. +.|+++ |.|
T Consensus 29 ~i~~~DG~~L~~~~~~P~~----------------~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~V 92 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKG----------------AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIR 92 (615)
T ss_dssp EEECTTSCEEEEEEEEETT----------------CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEE
T ss_pred EEECCCCCEEEEEEEeCCC----------------CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEE
Confidence 4555699999998776521 12457889999988753 1 03432 22 677777 999
Q ss_pred EecCCCCCCCCCCCCCCCC-----hh----HHHHHHHHHHHHhCC------CcEEEEEeChhHHHHHHHHHhCccccccE
Q 020916 94 YIPDLLFFGGSITDEADRS-----PT----FQAQCLATGLAKLGV------DKCVLVGFSYGGMVSFKVAELYPNLVQAM 158 (320)
Q Consensus 94 i~~d~~G~G~s~~~~~~~~-----~~----~~~~~l~~~l~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 158 (320)
+++|+||+|.|........ .. ..++|+.++++.+.. .++.++|||+||.+++.+|..+|++++++
T Consensus 93 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~ 172 (615)
T 1mpx_A 93 VFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVA 172 (615)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEE
T ss_pred EEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEE
Confidence 9999999999986543321 11 446677776665532 37999999999999999998889999999
Q ss_pred EEeccccc
Q 020916 159 VVSGSILA 166 (320)
Q Consensus 159 vl~~~~~~ 166 (320)
|.+++...
T Consensus 173 v~~~~~~d 180 (615)
T 1mpx_A 173 VPESPMID 180 (615)
T ss_dssp EEESCCCC
T ss_pred EecCCccc
Confidence 99998775
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.70 E-value=4.7e-16 Score=124.59 Aligned_cols=105 Identities=16% Similarity=0.083 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCC--CCCccccHHHH---HHHhhcc-ceEEecCCCCC-CCCCCCCC--------CCChhHH-HHHHHHHH
Q 020916 61 PSKPVVVLVHGF--AAEGIVTWQFQ---VGALTKK-YSVYIPDLLFF-GGSITDEA--------DRSPTFQ-AQCLATGL 124 (320)
Q Consensus 61 ~~~~~vv~lhG~--~~~~~~~~~~~---~~~l~~~-~~vi~~d~~G~-G~s~~~~~--------~~~~~~~-~~~l~~~l 124 (320)
+..|+||++||+ +++.. .|... .+.+.+. +.|+++|.++. +.++.... ...++.. ++++..++
T Consensus 32 ~~~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i 110 (304)
T 1sfr_A 32 ANSPALYLLDGLRAQDDFS-GWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWL 110 (304)
T ss_dssp TTBCEEEEECCTTCCSSSC-HHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCcc-hhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHHH
Confidence 367899999999 55666 77664 3556665 99999998764 22221111 2344444 47788888
Q ss_pred HH-hCCC--cEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 125 AK-LGVD--KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 125 ~~-~~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+. ++.. +++|+||||||.+|+.++.++|+++++++++++...
T Consensus 111 ~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 155 (304)
T 1sfr_A 111 QANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (304)
T ss_dssp HHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred HHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 76 5544 899999999999999999999999999999987753
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.7e-16 Score=136.45 Aligned_cols=122 Identities=15% Similarity=0.062 Sum_probs=94.0
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHH---H-HHhhcc-ceEEecCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQ---V-GALTKK-YSVYIPDL 98 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~---~-~~l~~~-~~vi~~d~ 98 (320)
..+...||.+|++..+.+.. .+..|+||++||++.... .+..+ + ..|.+. |.|+++|+
T Consensus 12 v~i~~~DG~~L~~~~~~P~~----------------~~~~P~vv~~~~~g~~~~-~~~~y~~~~~~~la~~Gy~vv~~D~ 74 (587)
T 3i2k_A 12 VMVPMRDGVRLAVDLYRPDA----------------DGPVPVLLVRNPYDKFDV-FAWSTQSTNWLEFVRDGYAVVIQDT 74 (587)
T ss_dssp EEEECTTSCEEEEEEEEECC----------------SSCEEEEEEEESSCTTCH-HHHHTTTCCTHHHHHTTCEEEEEEC
T ss_pred EEEECCCCCEEEEEEEECCC----------------CCCeeEEEEECCcCCCcc-ccccchhhHHHHHHHCCCEEEEEcC
Confidence 45677799999997765421 135688999999887755 33332 3 677777 99999999
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccc
Q 020916 99 LFFGGSITDEADRSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI 164 (320)
Q Consensus 99 ~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 164 (320)
||+|.|...... .....+|+.++++.+. ..++.++|+|+||.+++.+|..+|+.++++|.+++.
T Consensus 75 RG~G~S~g~~~~--~~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 75 RGLFASEGEFVP--HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp TTSTTCCSCCCT--TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred CCCCCCCCcccc--ccchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 999999865443 2345777777777663 257999999999999999999999999999999887
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.9e-16 Score=121.60 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=77.1
Q ss_pred CCeEEEEcCCC--CCccccHHHH---HHHhhcc-ceEEecCCCCC-CCCCC--CC------CCCChhH-HHHHHHHHHHH
Q 020916 63 KPVVVLVHGFA--AEGIVTWQFQ---VGALTKK-YSVYIPDLLFF-GGSIT--DE------ADRSPTF-QAQCLATGLAK 126 (320)
Q Consensus 63 ~~~vv~lhG~~--~~~~~~~~~~---~~~l~~~-~~vi~~d~~G~-G~s~~--~~------~~~~~~~-~~~~l~~~l~~ 126 (320)
+++||++||++ .+.. .|..+ .+.+.+. +.|+++|.+|. +.+.. +. ....+.. +++++..+++.
T Consensus 29 ~~~v~llHG~~~~~~~~-~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~ 107 (280)
T 1dqz_A 29 PHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQA 107 (280)
T ss_dssp SSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHH
T ss_pred CCEEEEECCCCCCCCcc-cccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHH
Confidence 36999999995 4666 77764 3556665 99999998753 22221 11 1234444 35788888887
Q ss_pred -hCC--CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 127 -LGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 127 -~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
++. ++++|+||||||.+|+.++.++|+++++++++++...
T Consensus 108 ~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 150 (280)
T 1dqz_A 108 NKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp HHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred HcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccc
Confidence 665 4899999999999999999999999999999988763
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-17 Score=139.26 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCCCCCccccHHH-HHHHhh-c-cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CCCc
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF-QVGALT-K-KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GVDK 131 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~-~~~~l~-~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~~ 131 (320)
+++|+||++||++++....|.. +++.|. . .|+|+++|++|+|.|..+...++.+..++++.++++.+ +.++
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~ 147 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQ 147 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 4678999999999876436766 556554 3 39999999999998753222345566788888888876 4679
Q ss_pred EEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
++||||||||.+|..+|.++|+ |.++++++|...
T Consensus 148 v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 148 VQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp EEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred EEEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 9999999999999999999999 999999998764
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.6e-18 Score=140.44 Aligned_cols=104 Identities=17% Similarity=0.079 Sum_probs=77.4
Q ss_pred CCCCeEEEEcCCCCCccccH--------------H----HHHHHhhcc-ceEEecCCCCCCCCCCCCCC-----CChhHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTW--------------Q----FQVGALTKK-YSVYIPDLLFFGGSITDEAD-----RSPTFQ 116 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~--------------~----~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~-----~~~~~~ 116 (320)
++.|+||++||++++.. .. . .+++.|++. |.|+++|+||+|.|...... .....+
T Consensus 112 ~~~P~Vl~~HG~g~~~~-~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~ 190 (391)
T 3g8y_A 112 GAVPGVLCIPGSGRTKE-GLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVV 190 (391)
T ss_dssp SCEEEEEEECCTTCCHH-HHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCSSGGGTTTTSCCHHHH
T ss_pred CCCCEEEEeCCCCCCch-hhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCCcccccccccchHHHH
Confidence 45789999999987654 21 3 678888888 99999999999999765211 233222
Q ss_pred ---------------HHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 117 ---------------AQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 117 ---------------~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+.|+.++++.+. .+++.++||||||.+++.++... ++|+++|++++...
T Consensus 191 ~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 191 SRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEEESCBCC
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-CceeEEEEccCCCC
Confidence 256677777652 35789999999999999888765 57999998876543
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-16 Score=130.59 Aligned_cols=103 Identities=18% Similarity=0.130 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCCCCCccccHH------------------HHHHHhhcc-ceEEecCCCCCCCCCCCCCC-----C-----
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ------------------FQVGALTKK-YSVYIPDLLFFGGSITDEAD-----R----- 111 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~------------------~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~-----~----- 111 (320)
++.|+||++||.+++.. .+. .++..|++. |.|+++|+||+|.|...... +
T Consensus 117 ~~~P~Vv~~HG~g~~~~-~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~ 195 (398)
T 3nuz_A 117 KPVPAILCIPGSGGNKE-GLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVV 195 (398)
T ss_dssp SCEEEEEEECCTTCCHH-HHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHH
T ss_pred CCccEEEEEcCCCCCcc-cccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCccccccccccccccchhhh
Confidence 35689999999988644 322 577888888 99999999999999743310 1
Q ss_pred ---------C-hhHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 112 ---------S-PTFQAQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 112 ---------~-~~~~~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+ ....+.|+.++++.+. .+++.++|||+||.+++.++... ++|+++|.+++..
T Consensus 196 ~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~~i~a~v~~~~~~ 264 (398)
T 3nuz_A 196 SRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-TSIYAFVYNDFLC 264 (398)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEEEESCBC
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-CcEEEEEEecccc
Confidence 1 1123467777777763 24799999999999999888875 4789888875543
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.2e-16 Score=128.76 Aligned_cols=104 Identities=14% Similarity=0.174 Sum_probs=82.0
Q ss_pred CCCeEEEEcCCCCCccccHH---HHHHHhhcc--ceEEecCCCCCCCCCCCC----------CCCChhHHHHHHHHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQ---FQVGALTKK--YSVYIPDLLFFGGSITDE----------ADRSPTFQAQCLATGLAK 126 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~---~~~~~l~~~--~~vi~~d~~G~G~s~~~~----------~~~~~~~~~~~l~~~l~~ 126 (320)
++.||||+||..++.. .+. .+...|++. +.|+++|+||||.|.+.. ...+.++.++|+..++++
T Consensus 37 ~g~Pi~l~~Ggeg~~~-~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~ 115 (446)
T 3n2z_B 37 NGGSILFYTGNEGDII-WFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKH 115 (446)
T ss_dssp TTCEEEEEECCSSCHH-HHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcch-hhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHH
Confidence 4557888899888765 321 234455554 699999999999996431 124678899999999988
Q ss_pred hCC-------CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 127 LGV-------DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 127 ~~~-------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
++. .+++++||||||.+|+.++.++|++|.++|+.+++..
T Consensus 116 l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 116 LKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchh
Confidence 754 3799999999999999999999999999999887654
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-14 Score=123.29 Aligned_cols=126 Identities=18% Similarity=0.100 Sum_probs=94.4
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHH----------------------
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ---------------------- 81 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~---------------------- 81 (320)
..|...||.+|+.+.+.+.. .++.|+||+.||++.+....+.
T Consensus 44 v~i~~~DG~~L~a~l~~P~~----------------~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 107 (560)
T 3iii_A 44 GTVEMRDGEKLYINIFRPNK----------------DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEES 107 (560)
T ss_dssp EEEECTTSCEEEEEEEECSS----------------SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTS
T ss_pred EEEECCCCcEEEEEEEecCC----------------CCCCCEEEEecCCCCCcccccccccccccccccccccccccccC
Confidence 34555689999997776521 1356899999999886421111
Q ss_pred HHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-----CcEEEEEeChhHHHHHHHHHhCcccc
Q 020916 82 FQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-----DKCVLVGFSYGGMVSFKVAELYPNLV 155 (320)
Q Consensus 82 ~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v 155 (320)
.....|+++ |.|+++|+||+|.|........ ....+|+.++++.+.. .++.++|||+||.+++.+|...|+++
T Consensus 108 ~~~~~la~~Gy~vv~~D~RG~G~S~G~~~~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l 186 (560)
T 3iii_A 108 PDPGFWVPNDYVVVKVALRGSDKSKGVLSPWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHL 186 (560)
T ss_dssp CCHHHHGGGTCEEEEEECTTSTTCCSCBCTTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTE
T ss_pred CCHHHHHhCCCEEEEEcCCCCCCCCCccccCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCce
Confidence 125678887 9999999999999986543322 3557777777776632 47999999999999999999999999
Q ss_pred ccEEEeccccc
Q 020916 156 QAMVVSGSILA 166 (320)
Q Consensus 156 ~~lvl~~~~~~ 166 (320)
+++|..++...
T Consensus 187 ~aiv~~~~~~d 197 (560)
T 3iii_A 187 KAMIPWEGLND 197 (560)
T ss_dssp EEEEEESCCCB
T ss_pred EEEEecCCccc
Confidence 99999887754
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.63 E-value=3.2e-15 Score=131.10 Aligned_cols=128 Identities=13% Similarity=0.040 Sum_probs=91.0
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCc-----c--ccHHHH---H-HHhhcc-c
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEG-----I--VTWQFQ---V-GALTKK-Y 91 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~-----~--~~~~~~---~-~~l~~~-~ 91 (320)
..+...||.+|+.+.+.+.. .+..|+||++||++... . ..|... . +.|+++ |
T Consensus 40 v~i~~~DG~~L~~~l~~P~~----------------~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~Gy 103 (652)
T 2b9v_A 40 VMVPMRDGVKLYTVIVIPKN----------------ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGY 103 (652)
T ss_dssp EEEECTTSCEEEEEEEEETT----------------CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTC
T ss_pred EEEECCCCcEEEEEEEecCC----------------CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCC
Confidence 44566799999987765521 12457888899887541 1 012222 2 667777 9
Q ss_pred eEEecCCCCCCCCCCCCCCCC-----hh----HHHHHHHHHHHHhCC------CcEEEEEeChhHHHHHHHHHhCccccc
Q 020916 92 SVYIPDLLFFGGSITDEADRS-----PT----FQAQCLATGLAKLGV------DKCVLVGFSYGGMVSFKVAELYPNLVQ 156 (320)
Q Consensus 92 ~vi~~d~~G~G~s~~~~~~~~-----~~----~~~~~l~~~l~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 156 (320)
.|+.+|+||+|.|........ .. ...+|+.++++.+.. .++.++|+|+||.+++.+|...|++++
T Consensus 104 aVv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lk 183 (652)
T 2b9v_A 104 IRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALK 183 (652)
T ss_dssp EEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEE
T ss_pred EEEEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceE
Confidence 999999999999986543221 11 456677777665521 379999999999999999988899999
Q ss_pred cEEEecccccc
Q 020916 157 AMVVSGSILAM 167 (320)
Q Consensus 157 ~lvl~~~~~~~ 167 (320)
++|.+++....
T Consensus 184 a~v~~~~~~d~ 194 (652)
T 2b9v_A 184 VAAPESPMVDG 194 (652)
T ss_dssp EEEEEEECCCT
T ss_pred EEEeccccccc
Confidence 99999887653
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.2e-17 Score=134.56 Aligned_cols=105 Identities=17% Similarity=0.200 Sum_probs=77.8
Q ss_pred CCCCeEEEEcCCCCC--------ccccHH----HHHHHhhcc-ceEEecCCCCCCCCCCCCC------------------
Q 020916 61 PSKPVVVLVHGFAAE--------GIVTWQ----FQVGALTKK-YSVYIPDLLFFGGSITDEA------------------ 109 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~--------~~~~~~----~~~~~l~~~-~~vi~~d~~G~G~s~~~~~------------------ 109 (320)
+.+++|||+||++++ .. .|. .+++.|.+. |+|+++|+||||.|.....
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~-~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~ 128 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGEN-YWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHS 128 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCC-TTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchh-hhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccc
Confidence 467899999999874 34 674 588999876 9999999999998752100
Q ss_pred -CCChhHHHHHHHHHHHHhCC-CcEEEEEeChhHHHHHHHHHh--------------------------CccccccEEEe
Q 020916 110 -DRSPTFQAQCLATGLAKLGV-DKCVLVGFSYGGMVSFKVAEL--------------------------YPNLVQAMVVS 161 (320)
Q Consensus 110 -~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~--------------------------~p~~v~~lvl~ 161 (320)
.++.+.+++++.+++++++. ++++||||||||.++..++.. +|++|.++|++
T Consensus 129 ~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i 208 (431)
T 2hih_A 129 EKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTI 208 (431)
T ss_dssp HHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEE
Confidence 01122223344445555553 789999999999999999876 68899999999
Q ss_pred ccccc
Q 020916 162 GSILA 166 (320)
Q Consensus 162 ~~~~~ 166 (320)
+++..
T Consensus 209 ~tP~~ 213 (431)
T 2hih_A 209 ATPHN 213 (431)
T ss_dssp SCCTT
T ss_pred CCCCC
Confidence 98653
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.8e-13 Score=106.05 Aligned_cols=99 Identities=15% Similarity=0.022 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCCCCccccH-------HHHHHHhhc-----cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-C
Q 020916 62 SKPVVVLVHGFAAEGIVTW-------QFQVGALTK-----KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-G 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~-------~~~~~~l~~-----~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-~ 128 (320)
..|+||++||.+++.. .| ..+++.|.+ .+.|+++|.+|- +. ......+.+++++...++.. .
T Consensus 68 ~~Pvlv~lHG~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~--~~--~~~~~~~~~~~~l~~~i~~~~~ 142 (297)
T 1gkl_A 68 KYNIFYLMHGGGENEN-TIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG--NC--TAQNFYQEFRQNVIPFVESKYS 142 (297)
T ss_dssp CCEEEEEECCTTCCTT-STTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST--TC--CTTTHHHHHHHTHHHHHHHHSC
T ss_pred CCCEEEEECCCCCCcc-hhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC--cc--chHHHHHHHHHHHHHHHHHhCC
Confidence 5678999999987655 43 345555543 288999998752 22 11112344567777777754 2
Q ss_pred --------------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 129 --------------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 --------------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
..++.|+|+||||.+++.++.++|+++++++.+++..
T Consensus 143 ~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 143 TYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 193 (297)
T ss_dssp SSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred ccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccc
Confidence 2458999999999999999999999999999998764
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.2e-13 Score=112.19 Aligned_cols=63 Identities=13% Similarity=-0.031 Sum_probs=48.5
Q ss_pred CCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 246 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
..+++|+++++|.+|.++|.+..+.+.+.+. +.+++++++++.+|..... .-...+.+||++.
T Consensus 341 ~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~---~~~~d~l~WL~~r 405 (462)
T 3guu_A 341 SVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEI---FGLVPSLWFIKQA 405 (462)
T ss_dssp CCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHH---HTHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchh---hhHHHHHHHHHHH
Confidence 4678999999999999999999999888774 3478999999999987642 1134455566543
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.5e-14 Score=117.65 Aligned_cols=97 Identities=19% Similarity=0.232 Sum_probs=72.8
Q ss_pred CCCCeEEEEcCCCCCcc------ccHH----HHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHH----
Q 020916 61 PSKPVVVLVHGFAAEGI------VTWQ----FQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLA---- 125 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~------~~~~----~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~---- 125 (320)
+.+++|||+||++++.. ..|. .+++.|.+. |+|+++|++|+|.|.. .+.++...++
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~---------~a~~l~~~i~~~~v 74 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD---------RACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH---------HHHHHHHHHHCEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc---------cHHHHHHHHHhhhh
Confidence 46788999999988642 1476 345889876 9999999999997742 1223322222
Q ss_pred ------------------------H-hCCCcEEEEEeChhHHHHHHHHHh-------------------Cc------ccc
Q 020916 126 ------------------------K-LGVDKCVLVGFSYGGMVSFKVAEL-------------------YP------NLV 155 (320)
Q Consensus 126 ------------------------~-~~~~~~~lvGhS~Gg~~a~~~a~~-------------------~p------~~v 155 (320)
+ .+.++++||||||||.++..++.. +| ++|
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V 154 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFV 154 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccce
Confidence 2 466899999999999999999972 35 789
Q ss_pred ccEEEeccccc
Q 020916 156 QAMVVSGSILA 166 (320)
Q Consensus 156 ~~lvl~~~~~~ 166 (320)
.++|+++++..
T Consensus 155 ~sLV~i~tP~~ 165 (387)
T 2dsn_A 155 LSVTTIATPHD 165 (387)
T ss_dssp EEEEEESCCTT
T ss_pred eEEEEECCCCC
Confidence 99999998654
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.2e-13 Score=106.45 Aligned_cols=200 Identities=15% Similarity=0.107 Sum_probs=117.1
Q ss_pred CCceEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccHHHHHHHhhc--c---ceE
Q 020916 21 VQPHAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTWQFQVGALTK--K---YSV 93 (320)
Q Consensus 21 ~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~--~---~~v 93 (320)
.+...+... +|..+.++++.|+.-+ ....-|+|+++||.+.... ..+..+...+.. . +-|
T Consensus 18 ~~~~~~~s~~~g~~~~~~v~~P~~~~-------------~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~iv 84 (275)
T 2qm0_A 18 TEQWKMYSKLEGKEYQIHISKPKQPA-------------PDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAII 84 (275)
T ss_dssp EEEEEEECTTTCCEEEEEEECCSSCC-------------CTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEE
T ss_pred ceEEEEEecCCCCEEEEEEECCCCCC-------------CCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEE
Confidence 344444443 5777777776653221 1134589999999763111 023333333321 2 789
Q ss_pred EecCCCCCC----------CCCCCC--------------CCC---Ch-hHHHHHHHHHHHH-hC--CCcEEEEEeChhHH
Q 020916 94 YIPDLLFFG----------GSITDE--------------ADR---SP-TFQAQCLATGLAK-LG--VDKCVLVGFSYGGM 142 (320)
Q Consensus 94 i~~d~~G~G----------~s~~~~--------------~~~---~~-~~~~~~l~~~l~~-~~--~~~~~lvGhS~Gg~ 142 (320)
+++|+++.+ .+.... ... .. +.+.+++...++. .. .+++.++|||+||.
T Consensus 85 V~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~ 164 (275)
T 2qm0_A 85 VGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGL 164 (275)
T ss_dssp EEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHH
T ss_pred EEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhH
Confidence 999998631 111000 001 11 1123444455544 23 35799999999999
Q ss_pred HHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHH
Q 020916 143 VSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVM 222 (320)
Q Consensus 143 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (320)
+++.++.++|+.+++++++++....... ... . ..+.+...
T Consensus 165 ~a~~~~~~~p~~f~~~~~~s~~~~~~~~--------------------------------~~~------~-~~~~~~~~- 204 (275)
T 2qm0_A 165 FALHILFTNLNAFQNYFISSPSIWWNNK--------------------------------SVL------E-KEENLIIE- 204 (275)
T ss_dssp HHHHHHHHCGGGCSEEEEESCCTTHHHH--------------------------------GGG------G-GTTHHHHH-
T ss_pred HHHHHHHhCchhhceeEEeCceeeeChH--------------------------------HHH------H-HHHHHHhh-
Confidence 9999999999999999998876410000 000 0 00000000
Q ss_pred hcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHh---C--CCCeEEEEecCCCcccc
Q 020916 223 FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQL---G--ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~gH~~~ 293 (320)
.. ......|+++++|+.|..++....+.+.+.+ . +.++++.+++|.+|+..
T Consensus 205 -------------~~-------~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~ 260 (275)
T 2qm0_A 205 -------------LN-------NAKFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASV 260 (275)
T ss_dssp -------------HH-------TCSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTH
T ss_pred -------------hc-------ccCCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCcccc
Confidence 00 1334578999999999887788888888887 3 22467889999999754
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.4e-12 Score=108.04 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=104.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-c----eEEecCCCCCC-CCCCCCCCCC-hhHHHHHHHHHHHHh-C----
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-Y----SVYIPDLLFFG-GSITDEADRS-PTFQAQCLATGLAKL-G---- 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~----~vi~~d~~G~G-~s~~~~~~~~-~~~~~~~l~~~l~~~-~---- 128 (320)
+..|+|+++||.+......+..+++.|.+. + .|+++|.+|++ .+........ .+.+++++...++.. .
T Consensus 195 ~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~el~~~i~~~~~~~~d 274 (403)
T 3c8d_A 195 EERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDR 274 (403)
T ss_dssp CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCC
T ss_pred CCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCChHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 467899999995421110233455666554 3 49999998732 1211111111 223345666666543 2
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL 208 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (320)
.++++|+||||||.+++.++.++|+++++++++++........ . .
T Consensus 275 ~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~--------------~---------------------~ 319 (403)
T 3c8d_A 275 ADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG--------------G---------------------Q 319 (403)
T ss_dssp GGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT--------------S---------------------S
T ss_pred CCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC--------------C---------------------C
Confidence 3579999999999999999999999999999988765211100 0 0
Q ss_pred cCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEec
Q 020916 209 WFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIK 286 (320)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 286 (320)
.... +.... .. ........|+++++|+.|..+ .+..+.+.+.+. +.++++.+++
T Consensus 320 -~~~~----~~~~~-----------~~-------~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~ 375 (403)
T 3c8d_A 320 -QEGV----LLEKL-----------KA-------GEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVD 375 (403)
T ss_dssp -SCCH----HHHHH-----------HT-------TSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEES
T ss_pred -cHHH----HHHHH-----------Hh-------ccccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeC
Confidence 0000 00000 00 012334678999999988643 566777777775 3468999999
Q ss_pred CCCccc
Q 020916 287 KAGHLV 292 (320)
Q Consensus 287 ~~gH~~ 292 (320)
| +|..
T Consensus 376 G-gH~~ 380 (403)
T 3c8d_A 376 G-GHDA 380 (403)
T ss_dssp C-CSCH
T ss_pred C-CCCH
Confidence 8 6873
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=99.25 E-value=5.7e-10 Score=92.95 Aligned_cols=128 Identities=17% Similarity=0.126 Sum_probs=86.8
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHH----------------
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA---------------- 86 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~---------------- 86 (320)
..+++++++..|.||....... ..++|+||++||.++.+. .+..+.+.
T Consensus 23 sGyv~v~~~~~lfy~f~~s~~~---------------~~~~Pl~lwlnGGPG~Ss-~~g~~~e~GP~~~~~~~~~l~~n~ 86 (452)
T 1ivy_A 23 SGYLKSSGSKHLHYWFVESQKD---------------PENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNP 86 (452)
T ss_dssp EEEEECSTTEEEEEEEECCSSC---------------GGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECT
T ss_pred EEEEeeCCCCeEEEEEEEcCCC---------------CCCCCEEEEECCCCcHHH-HHHHHHhcCCcEEeCCCceeeeCC
Confidence 3567887778899987664211 136899999999999988 66443221
Q ss_pred --hhccceEEecCC-CCCCCCCCCCCCC--ChhHHHHHH----HHHHHH---hCCCcEEEEEeChhHHHHHHHHHh----
Q 020916 87 --LTKKYSVYIPDL-LFFGGSITDEADR--SPTFQAQCL----ATGLAK---LGVDKCVLVGFSYGGMVSFKVAEL---- 150 (320)
Q Consensus 87 --l~~~~~vi~~d~-~G~G~s~~~~~~~--~~~~~~~~l----~~~l~~---~~~~~~~lvGhS~Gg~~a~~~a~~---- 150 (320)
+.+..+++.+|. +|.|.|......+ +....++|+ ..+++. +...+++|.|+|+||..+..+|..
T Consensus 87 ~sw~~~~~~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~ 166 (452)
T 1ivy_A 87 YSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQD 166 (452)
T ss_dssp TCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTC
T ss_pred CcccccccEEEEecCCCCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhc
Confidence 123488999996 7999997443322 223344444 334443 244789999999999977666654
Q ss_pred CccccccEEEeccccc
Q 020916 151 YPNLVQAMVVSGSILA 166 (320)
Q Consensus 151 ~p~~v~~lvl~~~~~~ 166 (320)
.+-.++++++.++...
T Consensus 167 ~~~~l~g~~ign~~~d 182 (452)
T 1ivy_A 167 PSMNLQGLAVGNGLSS 182 (452)
T ss_dssp TTSCEEEEEEESCCSB
T ss_pred CccccceEEecCCccC
Confidence 3457899999998764
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=5.8e-10 Score=87.82 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=31.5
Q ss_pred CcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
+++.|+||||||.+++.++.+ |+.+++++++++..
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~~ 175 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSL 175 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcch
Confidence 368999999999999999999 99999999888753
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.9e-10 Score=109.27 Aligned_cols=206 Identities=16% Similarity=0.113 Sum_probs=121.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC-CcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV-DKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~ 139 (320)
+..++++|+|+.++... .|..+...|. .+.|++++.++ .+..++...+.++.+.. +++.++|||+
T Consensus 1056 ~~~~~L~~l~~~~g~~~-~y~~la~~L~-~~~v~~l~~~~------------~~~~~~~~~~~i~~~~~~gp~~l~G~S~ 1121 (1304)
T 2vsq_A 1056 DQEQIIFAFPPVLGYGL-MYQNLSSRLP-SYKLCAFDFIE------------EEDRLDRYADLIQKLQPEGPLTLFGYSA 1121 (1304)
T ss_dssp TSCCEEECCCCTTCBGG-GGHHHHTTCC-SCEEEECBCCC------------STTHHHHHHHHHHHHCCSSCEEEEEETT
T ss_pred ccCCcceeecccccchH-HHHHHHhccc-ccceEeecccC------------HHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 35678999999999888 8999988887 78899887742 23445556666666654 5899999999
Q ss_pred hHHHHHHHHHhCc---cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh----hccccCCc
Q 020916 140 GGMVSFKVAELYP---NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT----YKKLWFPS 212 (320)
Q Consensus 140 Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 212 (320)
||.+|.++|.+.. ..+..++++++........... .........+..... .....+..
T Consensus 1122 Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~---------------~~~~~~~~~l~~~~~~~~~~~~~~l~~ 1186 (1304)
T 2vsq_A 1122 GCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDG---------------RTVESDVEALMNVNRDNEALNSEAVKH 1186 (1304)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC--------------------CHHHHHHHHHTTCC-------CTTTG
T ss_pred CchHHHHHHHHHHhCCCceeEEEEecCccccccccccc---------------ccchhhHHHHHHhhhhhhhhcchhcch
Confidence 9999999997643 3588889988764321110000 000000111111000 00011111
Q ss_pred hhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccc
Q 020916 213 CLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 292 (320)
.....+...+ .....+ ..-..+++|++++.|+.|.. +.+....+.+... ...+++.++| +|+.
T Consensus 1187 ~~l~~~~~~~--------~~~~~~------~~~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~-~~~~~~~v~G-~H~~ 1249 (1304)
T 2vsq_A 1187 GLKQKTHAFY--------SYYVNL------ISTGQVKADIDLLTSGADFD-IPEWLASWEEATT-GVYRMKRGFG-THAE 1249 (1304)
T ss_dssp GGHHHHHHHH--------HHHHC-----------CBSSEEEEEECSSCCC-CCSSEECSSTTBS-SCCCEEECSS-CTTG
T ss_pred HHHHHHHHHH--------HHHHHH------hccCCcCCCEEEEEecCccc-cccchhhHHHHhC-CCeEEEEeCC-CHHH
Confidence 1111111110 000000 01156889999999998863 2222223333333 4677889985 9998
Q ss_pred ccCCh--HHHHHHHHHHHHhhh
Q 020916 293 HLERP--CAYNRCLKQFLASLH 312 (320)
Q Consensus 293 ~~~~~--~~~~~~i~~fl~~~~ 312 (320)
+++.| +.+++.|.+||.+..
T Consensus 1250 ml~~~~~~~~a~~l~~~L~~~~ 1271 (1304)
T 2vsq_A 1250 MLQGETLDRNAEILLEFLNTQT 1271 (1304)
T ss_dssp GGSHHHHHHHHHHHHHHHHCCC
T ss_pred HCCCHHHHHHHHHHHHHHhccc
Confidence 88754 589999999998654
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-09 Score=85.34 Aligned_cols=124 Identities=15% Similarity=0.201 Sum_probs=76.0
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCccccc-cEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYPNLVQ-AMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~-~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
.++++|.|+|+||.+++.++..+|+.++ +++++++.+........ . ......
T Consensus 10 ~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~-~-----~~~~~~--------------------- 62 (318)
T 2d81_A 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY-Y-----TSCMYN--------------------- 62 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC-G-----GGGSTT---------------------
T ss_pred cceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH-H-----HHHhhc---------------------
Confidence 3579999999999999999999999998 88777654321111000 0 000000
Q ss_pred ccCC-chhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC-CCcEEEEecCCCCCCCHHHHHHHHHHhCCC----CeE
Q 020916 208 LWFP-SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF-PQRVHLLWGEDDQIFNVELAHNMKEQLGAD----HVT 281 (320)
Q Consensus 208 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~ 281 (320)
. ++ ........... .. .....+.++ ..|++++||++|.++|++.++.+.+.+... +++
T Consensus 63 ~-~~~~~~~~~~~~~~-~~--------------~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve 126 (318)
T 2d81_A 63 G-YPSITTPTANMKSW-SG--------------NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVS 126 (318)
T ss_dssp C-CCCCHHHHHHHHHH-BT--------------TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEE
T ss_pred c-CCCCCCHHHHHHHh-hc--------------ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceE
Confidence 0 00 00001111100 00 011112222 358999999999999999999999888621 478
Q ss_pred EEEecCCCcccccC
Q 020916 282 FQGIKKAGHLVHLE 295 (320)
Q Consensus 282 ~~~~~~~gH~~~~~ 295 (320)
+++++++||....+
T Consensus 127 ~~~~~g~gH~~~~~ 140 (318)
T 2d81_A 127 YVTTTGAVHTFPTD 140 (318)
T ss_dssp EEEETTCCSSEEES
T ss_pred EEEeCCCCCCCccC
Confidence 99999999986544
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.1e-08 Score=82.60 Aligned_cols=129 Identities=12% Similarity=0.112 Sum_probs=87.6
Q ss_pred CceEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHH---------------
Q 020916 22 QPHAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVG--------------- 85 (320)
Q Consensus 22 ~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~--------------- 85 (320)
...+++++ ++..|.||...... ...++|.+|+++|.++.+. .+..+.+
T Consensus 17 ysGYv~v~~~~~~lfy~f~~s~~---------------~~~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n 80 (421)
T 1cpy_A 17 YTGYLDVEDEDKHFFFWTFESRN---------------DPAKDPVILWLNGGPGCSS-LTGLFFALGPSSIGPDLKPIGN 80 (421)
T ss_dssp CEEEEEETTTTEEEEEEEECCSS---------------CTTTSCEEEEECCTTTBCT-HHHHTTTTSSEEEETTTEEEEC
T ss_pred eEEEEEcCCCCcEEEEEEEEeCC---------------CCCCCCEEEEECCCCchHh-HHHHHHccCCcEECCCCceeEC
Confidence 34567775 37789998766421 1246899999999999888 6643321
Q ss_pred --HhhccceEEecC-CCCCCCCCCCCC-CCChhHHHHHHHHHHHHh-------CC--CcEEEEEeChhHHHHHHHHHhCc
Q 020916 86 --ALTKKYSVYIPD-LLFFGGSITDEA-DRSPTFQAQCLATGLAKL-------GV--DKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 86 --~l~~~~~vi~~d-~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~-------~~--~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
.+.+..+++.+| ..|.|.|..... ..+.+..++|+.++++.. .. .+++|.|.|+||..+-.+|...-
T Consensus 81 ~~sW~~~an~lfiDqPvGtGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~ 160 (421)
T 1cpy_A 81 PYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEIL 160 (421)
T ss_dssp TTCGGGGSEEECCCCSTTSTTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHT
T ss_pred CcccccccCEEEecCCCcccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHH
Confidence 122336899999 568998865443 344556677777766543 33 58999999999999988886421
Q ss_pred ------cccccEEEeccccc
Q 020916 153 ------NLVQAMVVSGSILA 166 (320)
Q Consensus 153 ------~~v~~lvl~~~~~~ 166 (320)
-.++++++-++...
T Consensus 161 ~~n~~~inLkGi~IGNg~~d 180 (421)
T 1cpy_A 161 SHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp TCSSCSSCCCEEEEESCCCC
T ss_pred hccccccceeeEEecCcccC
Confidence 24788877666543
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.02 E-value=3e-09 Score=85.51 Aligned_cols=133 Identities=13% Similarity=0.131 Sum_probs=82.9
Q ss_pred HHHHHHHHHHh-CC-CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHH
Q 020916 117 AQCLATGLAKL-GV-DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVK 194 (320)
Q Consensus 117 ~~~l~~~l~~~-~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (320)
.+++...++.. .. ....|+||||||..++.++.++|+.+.+++.+++......
T Consensus 122 ~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~------------------------- 176 (331)
T 3gff_A 122 EKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDS------------------------- 176 (331)
T ss_dssp HHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTT-------------------------
T ss_pred HHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCCh-------------------------
Confidence 34445555443 21 2347899999999999999999999999999987641100
Q ss_pred HHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCC-------CCCHHH
Q 020916 195 GLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQ-------IFNVEL 267 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-------~~~~~~ 267 (320)
....... .. .... ......|+++.+|+.|. .++.+.
T Consensus 177 -----------------~~~~~~~-~~----------~~~~---------~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~ 219 (331)
T 3gff_A 177 -----------------PHYLTLL-EE----------RVVK---------GDFKQKQLFMAIANNPLSPGFGVSSYHKDL 219 (331)
T ss_dssp -----------------THHHHHH-HH----------HHHH---------CCCSSEEEEEEECCCSEETTTEECCHHHHH
T ss_pred -----------------HHHHHHH-HH----------Hhhc---------ccCCCCeEEEEeCCCCCCCccchHHHHHHH
Confidence 0000000 00 0000 01235789999999998 345555
Q ss_pred HHHHHHHhC-----CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 268 AHNMKEQLG-----ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 268 ~~~~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
.+++.+.+. +-++++.+++|.+|.... +..+.+.+..++.....
T Consensus 220 ~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~~~~~ 268 (331)
T 3gff_A 220 NLAFADKLTKLAPKGLGFMAKYYPEETHQSVS--HIGLYDGIRHLFKDFAI 268 (331)
T ss_dssp HHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH--HHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHhccCCCceEEEEECCCCCccccH--HHHHHHHHHHHHhhcCC
Confidence 566655553 125788999999998654 56666666666655543
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.6e-09 Score=90.61 Aligned_cols=103 Identities=20% Similarity=0.154 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCC----CCCCCCCCC----CCCChhHHHHHHHHHHHHh-
Q 020916 62 SKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLL----FFGGSITDE----ADRSPTFQAQCLATGLAKL- 127 (320)
Q Consensus 62 ~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~----G~G~s~~~~----~~~~~~~~~~~l~~~l~~~- 127 (320)
..|+||++||.+ ++.. .+......|++. +.|+.+|+| |++.+.... ....+.+....+..+.+..
T Consensus 96 ~~PviV~iHGGg~~~g~~~-~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~ 174 (489)
T 1qe3_A 96 NLPVMVWIHGGAFYLGAGS-EPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENIS 174 (489)
T ss_dssp SEEEEEEECCSTTTSCCTT-SGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEECCCccccCCCC-CcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHHH
Confidence 468999999965 3333 333334455443 999999999 565543321 1122333333333332322
Q ss_pred ----CCCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 128 ----GVDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 128 ----~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
+.+++.|+|+|+||.++..++... ++.++++|+.++..
T Consensus 175 ~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 175 AFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 235799999999999998887653 45789999988764
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.91 E-value=2.7e-09 Score=90.80 Aligned_cols=120 Identities=20% Similarity=0.184 Sum_probs=78.3
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCC----
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLL---- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~---- 99 (320)
+|+..|.+|.+.. ..+..|+||++||.+ ++.. .+......|++. +.|+.+|+|
T Consensus 82 edcl~l~v~~P~~-----------------~~~~~Pviv~iHGGg~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~ 143 (498)
T 2ogt_A 82 EDGLYLNIWSPAA-----------------DGKKRPVLFWIHGGAFLFGSGS-SPWYDGTAFAKHGDVVVVTINYRMNVF 143 (498)
T ss_dssp SCCCEEEEEESCS-----------------SSCCEEEEEEECCSTTTSCCTT-CGGGCCHHHHHHHTCEEEEECCCCHHH
T ss_pred CCCcEEEEEecCC-----------------CCCCCcEEEEEcCCccCCCCCC-CCcCCHHHHHhCCCEEEEeCCCcCchh
Confidence 4677777776542 113568999999987 4444 333334555543 999999999
Q ss_pred CCCCCCCCCC-------CCChhHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 100 FFGGSITDEA-------DRSPTFQAQCLATGLAKL---G--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 100 G~G~s~~~~~-------~~~~~~~~~~l~~~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
|++.+..... ...+.+....+..+.+.. + .+++.|+|+|.||.++..++... +..++++|+.++..
T Consensus 144 Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 144 GFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSG 223 (498)
T ss_dssp HCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred hccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCc
Confidence 8887754221 112333333333333332 2 45799999999999998887653 34699999998865
Q ss_pred c
Q 020916 166 A 166 (320)
Q Consensus 166 ~ 166 (320)
.
T Consensus 224 ~ 224 (498)
T 2ogt_A 224 S 224 (498)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=5.7e-08 Score=73.87 Aligned_cols=127 Identities=16% Similarity=0.155 Sum_probs=89.9
Q ss_pred eEEEcC--CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHH---------------
Q 020916 24 HAVEIE--PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVG--------------- 85 (320)
Q Consensus 24 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~--------------- 85 (320)
.++.+. .|..|.||....... ..++|.+|+++|.++++. .+ ..+.+
T Consensus 22 Gy~~v~~~~~~~lFywf~es~~~---------------~~~~Pl~lwlnGGPGcSS-~~~g~~~E~GP~~v~~~~~~l~~ 85 (255)
T 1whs_A 22 GYITVDEGAGRSLFYLLQEAPED---------------AQPAPLVLWLNGGPGCSS-VAYGASEELGAFRVKPRGAGLVL 85 (255)
T ss_dssp EEEEEETTTTEEEEEEEECCCGG---------------GCSCCEEEEECCTTTBCT-TTTHHHHTSSSEEECGGGCCEEE
T ss_pred EEEECCCCCCcEEEEEEEEecCC---------------CCCCCEEEEECCCCchHH-HHHHHHhccCCeEecCCCCeeee
Confidence 456664 577899987664221 247899999999999888 65 44331
Q ss_pred ---HhhccceEEecCC-CCCCCCCCCCC----CCChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHh
Q 020916 86 ---ALTKKYSVYIPDL-LFFGGSITDEA----DRSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 86 ---~l~~~~~vi~~d~-~G~G~s~~~~~----~~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.+.+..+++.+|. .|.|.|..... ..+.+..++++.++++.. ...+++|.|+|+||..+..+|..
T Consensus 86 N~~sW~~~anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~ 165 (255)
T 1whs_A 86 NEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQL 165 (255)
T ss_dssp CTTCGGGTSEEEEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHH
T ss_pred CcccccccCCEEEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHH
Confidence 1233478999996 59999865432 246677788887777642 44689999999999999888864
Q ss_pred Cc------cccccEEEeccccc
Q 020916 151 YP------NLVQAMVVSGSILA 166 (320)
Q Consensus 151 ~p------~~v~~lvl~~~~~~ 166 (320)
.- -.++++++.++...
T Consensus 166 i~~~n~~~inLkGi~ign~~~d 187 (255)
T 1whs_A 166 VHRSKNPVINLKGFMVGNGLID 187 (255)
T ss_dssp HHHHTCSSCEEEEEEEEEECCB
T ss_pred HHHcCCcccccceEEecCCccC
Confidence 21 24789998888764
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=5.1e-07 Score=71.37 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=63.3
Q ss_pred CCCeEEEEcCCCCCccccHHHH--HHHhh-cc-ceEEecCCCCCCCCCC----------------CC-------CCCC-h
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ--VGALT-KK-YSVYIPDLLFFGGSIT----------------DE-------ADRS-P 113 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~--~~~l~-~~-~~vi~~d~~G~G~s~~----------------~~-------~~~~-~ 113 (320)
.-|+|.++||++++.. .|... +..+. +. ..++.+|..-.+.-.. .+ ..+. .
T Consensus 48 ~~PVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~ 126 (299)
T 4fol_A 48 RIPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMY 126 (299)
T ss_dssp CBCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHH
T ss_pred CcCEEEEECCCCCChH-HHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHH
Confidence 4589999999999888 77643 23333 33 6777776421111000 00 0111 2
Q ss_pred hHHHHHHHHHHHHh-C---------CCcEEEEEeChhHHHHHHHHHhCc--cccccEEEecccc
Q 020916 114 TFQAQCLATGLAKL-G---------VDKCVLVGFSYGGMVSFKVAELYP--NLVQAMVVSGSIL 165 (320)
Q Consensus 114 ~~~~~~l~~~l~~~-~---------~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~ 165 (320)
+.+++++..+++.. . .++..|.||||||.-|+.++.++| ++..++...++..
T Consensus 127 ~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~ 190 (299)
T 4fol_A 127 DYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp HHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred HHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEeccccc
Confidence 34567777777642 2 245899999999999999999864 5566665555443
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=2.9e-09 Score=105.70 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=0.0
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC-CCcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG-VDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~G 140 (320)
.+++++|+|+.+++.. .|..+.+.|. ..|+.+..+|. ....+++.+++++.+.+..+. .+++.++|||+|
T Consensus 2241 ~~~~Lfc~~~agG~~~-~y~~l~~~l~--~~v~~lq~pg~------~~~~~i~~la~~~~~~i~~~~p~gpy~L~G~S~G 2311 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSIT-VFHGLAAKLS--IPTYGLQCTGA------APLDSIQSLASYYIECIRQVQPEGPYRIAGYSYG 2311 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHH-HHHHHHHhhC--CcEEEEecCCC------CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECHh
Confidence 4578999999999988 8999988886 78888888871 123466677777777666654 368999999999
Q ss_pred HHHHHHHHHhCcc---ccc---cEEEeccc
Q 020916 141 GMVSFKVAELYPN---LVQ---AMVVSGSI 164 (320)
Q Consensus 141 g~~a~~~a~~~p~---~v~---~lvl~~~~ 164 (320)
|.+|.++|.+... .+. .++++++.
T Consensus 2312 g~lA~evA~~L~~~G~~v~~~~~L~llDg~ 2341 (2512)
T 2vz8_A 2312 ACVAFEMCSQLQAQQSATPGNHSLFLFDGS 2341 (2512)
T ss_dssp ------------------------------
T ss_pred HHHHHHHHHHHHHcCCCCCccceEEEEeCc
Confidence 9999999976432 344 67777763
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.63 E-value=5.7e-08 Score=83.59 Aligned_cols=120 Identities=15% Similarity=0.066 Sum_probs=73.6
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCC---CccccHHHHHHHhhc-c-ceEEecCCC----
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAA---EGIVTWQFQVGALTK-K-YSVYIPDLL---- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~-~-~~vi~~d~~---- 99 (320)
+|...|.+|.+... .....|+||++||.+. +.. ........|+. . +.|+.+++|
T Consensus 94 edcl~l~v~~P~~~----------------~~~~~Pviv~iHGGg~~~g~~~-~~~~~~~~la~~~g~vvv~~nYRlg~~ 156 (543)
T 2ha2_A 94 EDCLYLNVWTPYPR----------------PASPTPVLIWIYGGGFYSGAAS-LDVYDGRFLAQVEGAVLVSMNYRVGTF 156 (543)
T ss_dssp SCCCEEEEEEESSC----------------CSSCEEEEEEECCSTTTCCCTT-SGGGCTHHHHHHHCCEEEEECCCCHHH
T ss_pred CcCCeEEEeecCCC----------------CCCCCeEEEEECCCccccCCCC-CCcCChHHHHhcCCEEEEEeccccccc
Confidence 46777777765431 0124589999999763 222 22223355554 3 999999999
Q ss_pred CCCCCC-CC--CCCCChhHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 100 FFGGSI-TD--EADRSPTFQAQCLATGLAKL---G--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 100 G~G~s~-~~--~~~~~~~~~~~~l~~~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
|++.+. .+ .....+.+....+..+.+.. + .+++.|+|+|.||.++..++... +..++++|+.++..
T Consensus 157 Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 157 GFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred ccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 444431 11 12223444444443333332 3 35799999999999998777543 45789999998754
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.61 E-value=9.5e-08 Score=81.99 Aligned_cols=103 Identities=14% Similarity=0.024 Sum_probs=65.5
Q ss_pred CCCeEEEEcCCC---CCccccHHHHHHHhhc-c-ceEEecCCC----CCCCCC-CCC--CCCChhHHHHHHHHHHHH---
Q 020916 62 SKPVVVLVHGFA---AEGIVTWQFQVGALTK-K-YSVYIPDLL----FFGGSI-TDE--ADRSPTFQAQCLATGLAK--- 126 (320)
Q Consensus 62 ~~~~vv~lhG~~---~~~~~~~~~~~~~l~~-~-~~vi~~d~~----G~G~s~-~~~--~~~~~~~~~~~l~~~l~~--- 126 (320)
..|+||++||.+ ++.. ........|++ . +.|+.+++| |++.+. .+. ....+.+....+..+.+.
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~ 184 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSS-LHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAA 184 (529)
T ss_dssp SEEEEEEECCSTTTSCCTT-CGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCeEEEEECCCccccCCCC-ccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccHHHHHHHHHHHHHHHHH
Confidence 568999999975 2322 22222355554 3 999999999 444441 111 122344444444444333
Q ss_pred hC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 127 LG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 127 ~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
.+ .++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 185 fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 185 FGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 23 35799999999999999887653 35789999998865
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.51 E-value=2.1e-07 Score=79.97 Aligned_cols=120 Identities=16% Similarity=0.082 Sum_probs=74.2
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCC---CccccHHHHHHHhh-cc-ceEEecCCC----
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAA---EGIVTWQFQVGALT-KK-YSVYIPDLL---- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~---~~~~~~~~~~~~l~-~~-~~vi~~d~~---- 99 (320)
+|...|.+|.+... ....|+||++||.+. +.. ........|+ +. +.|+.+++|
T Consensus 92 edcl~lnv~~P~~~-----------------~~~~Pv~v~iHGG~~~~g~~~-~~~~~~~~la~~~~~vvv~~nYRlg~~ 153 (537)
T 1ea5_A 92 EDCLYLNIWVPSPR-----------------PKSTTVMVWIYGGGFYSGSST-LDVYNGKYLAYTEEVVLVSLSYRVGAF 153 (537)
T ss_dssp SCCCEEEEEECSSC-----------------CSSEEEEEEECCSTTTCCCTT-CGGGCTHHHHHHHTCEEEECCCCCHHH
T ss_pred CcCCeEEEeccCCC-----------------CCCCeEEEEECCCcccCCCCC-CCccChHHHHhcCCEEEEEeccCcccc
Confidence 46677777765431 135689999999653 222 2112334555 34 999999999
Q ss_pred CCCCCC-CC--CCCCChhHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEeccccc
Q 020916 100 FFGGSI-TD--EADRSPTFQAQCLATGLAKL---G--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILA 166 (320)
Q Consensus 100 G~G~s~-~~--~~~~~~~~~~~~l~~~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~ 166 (320)
|+..+. .+ .....+.+....+..+.+.. + .++|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 154 Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 154 GFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred ccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 444331 11 12223444444444443433 3 35799999999999998887642 347899999987653
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=4.6e-06 Score=67.53 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=31.2
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 129 VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
.+++.++|||+||..|+.+++..+ ||+.+|..++..
T Consensus 218 ~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 218 TKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGA 253 (433)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCT
T ss_pred hhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCC
Confidence 468999999999999999999875 899999887654
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=2.9e-07 Score=79.25 Aligned_cols=121 Identities=19% Similarity=0.152 Sum_probs=74.4
Q ss_pred cCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCC---CccccHHHHHHHhhc-c-ceEEecCCC---
Q 020916 28 IEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAA---EGIVTWQFQVGALTK-K-YSVYIPDLL--- 99 (320)
Q Consensus 28 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~-~-~~vi~~d~~--- 99 (320)
.+|...|.++.+..... ....|+||++||.+. +.. .|.. ..|.. . +.|+.+|+|
T Consensus 95 ~edcl~lnv~~P~~~~~---------------~~~~Pv~v~iHGG~~~~g~~~-~~~~--~~la~~~g~vvv~~nYRlg~ 156 (542)
T 2h7c_A 95 SEDCLYLNIYTPADLTK---------------KNRLPVMVWIHGGGLMVGAAS-TYDG--LALAAHENVVVVTIQYRLGI 156 (542)
T ss_dssp ESCCCEEEEEECSCTTS---------------CCCEEEEEEECCSTTTSCCST-TSCC--HHHHHHHTCEEEEECCCCHH
T ss_pred CCCCcEEEEEECCCCCC---------------CCCCCEEEEECCCcccCCCcc-ccCH--HHHHhcCCEEEEecCCCCcc
Confidence 34777888776643110 135689999999653 332 2322 22433 3 999999999
Q ss_pred -CCCCCCCCC--CCCChhHHHHHHHHHHHH---hC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEeccccc
Q 020916 100 -FFGGSITDE--ADRSPTFQAQCLATGLAK---LG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILA 166 (320)
Q Consensus 100 -G~G~s~~~~--~~~~~~~~~~~l~~~l~~---~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~ 166 (320)
|++.+.... ....+.+....+..+.+. .+ .++|.|+|+|.||.++..++... +..++++|+.++...
T Consensus 157 ~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 157 WGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred ccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 454443221 122333433333333333 23 35799999999999999888752 467899999887653
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=3.3e-06 Score=71.17 Aligned_cols=105 Identities=18% Similarity=0.177 Sum_probs=76.6
Q ss_pred CCCCeEEEEcCCCCCccccHH--HHHHHhhcc--ceEEecCCCCCCCCCCCC---------CCCChhHHHHHHHHHHHHh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ--FQVGALTKK--YSVYIPDLLFFGGSITDE---------ADRSPTFQAQCLATGLAKL 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~--~~~~~l~~~--~~vi~~d~~G~G~s~~~~---------~~~~~~~~~~~l~~~l~~~ 127 (320)
+++|++|++-|=+ +....+. .++..+++. --++.+++|-+|.|.+-. ...+.++..+|+..+++++
T Consensus 41 ~~gPIfl~~gGEg-~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~ 119 (472)
T 4ebb_A 41 GEGPIFFYTGNEG-DVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRAL 119 (472)
T ss_dssp TTCCEEEEECCSS-CHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCc-cccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHH
Confidence 3467666665433 3321121 134456665 679999999999997621 2257777888998888876
Q ss_pred C------CCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 128 G------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 128 ~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+ ..|++++|-|+||++|..+-.++|+.|.+.+..+++..
T Consensus 120 k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 120 RRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 3 24799999999999999999999999999998887654
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.43 E-value=2.5e-07 Score=79.74 Aligned_cols=102 Identities=18% Similarity=0.128 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCC---CccccHHHHHHHhhcc-ceEEecCCCC----CCCCCCCC--CCCChhHHHHHHHHHHHH---hC-
Q 020916 63 KPVVVLVHGFAA---EGIVTWQFQVGALTKK-YSVYIPDLLF----FGGSITDE--ADRSPTFQAQCLATGLAK---LG- 128 (320)
Q Consensus 63 ~~~vv~lhG~~~---~~~~~~~~~~~~l~~~-~~vi~~d~~G----~G~s~~~~--~~~~~~~~~~~l~~~l~~---~~- 128 (320)
.|+||++||.+. +.. ........|.+. +.|+.+|+|. +..+.... ....+.+....+..+.+. .+
T Consensus 115 ~Pviv~iHGGg~~~g~~~-~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fgg 193 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGD-SDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGG 193 (551)
T ss_dssp EEEEEEECCSTTTSCCSC-TTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTE
T ss_pred CCEEEEEcCCccccCCCc-ccccCHHHHHhCCeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 689999999652 222 222234455556 9999999994 22222111 122334444444333333 23
Q ss_pred -CCcEEEEEeChhHHHHHHHHHh--CccccccEEEecccc
Q 020916 129 -VDKCVLVGFSYGGMVSFKVAEL--YPNLVQAMVVSGSIL 165 (320)
Q Consensus 129 -~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 165 (320)
.+++.|+|+|.||.++..++.. .+..++++|+.++..
T Consensus 194 Dp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 194 RPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred ChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 3579999999999999988765 345789999988764
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.42 E-value=4.7e-07 Score=77.52 Aligned_cols=104 Identities=17% Similarity=0.090 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCCCCcc--ccHH--HHHHHhhccceEEecCCC----CCCCCCCC----CCCCChhHHHHHHHHHHHHh--
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQ--FQVGALTKKYSVYIPDLL----FFGGSITD----EADRSPTFQAQCLATGLAKL-- 127 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~--~~~~~l~~~~~vi~~d~~----G~G~s~~~----~~~~~~~~~~~~l~~~l~~~-- 127 (320)
..|+||++||.+.... ..|. .++......+.|+.+|+| |++.+... .....+.+....+..+.+..
T Consensus 101 ~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~ 180 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 180 (522)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHHHH
Confidence 4689999999863221 0232 222222234999999999 44443211 11223334443333333332
Q ss_pred -C--CCcEEEEEeChhHHHHHHHHHhC----ccccccEEEecccc
Q 020916 128 -G--VDKCVLVGFSYGGMVSFKVAELY----PNLVQAMVVSGSIL 165 (320)
Q Consensus 128 -~--~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~~ 165 (320)
+ .++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 181 fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 181 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 3 35799999999998777666543 45788999888754
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.3e-05 Score=64.01 Aligned_cols=49 Identities=14% Similarity=0.026 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHh--------CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 116 QAQCLATGLAKL--------GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 116 ~~~~l~~~l~~~--------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
++-++..+++++ +.+++.++|||+||..|+.+++..+ ||+.+|..++..
T Consensus 163 waWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 163 WAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp HHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 344555566554 2357999999999999999999875 899999887644
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-05 Score=62.74 Aligned_cols=128 Identities=18% Similarity=0.158 Sum_probs=89.7
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHH----------------
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA---------------- 86 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~---------------- 86 (320)
..+|+++++..|.||...... ...+.|.||++.|.++.+. .+..+.+.
T Consensus 25 sGyv~v~~~~~lFywf~es~~---------------~p~~~Pl~lWlnGGPGcSS-~~g~~~E~GP~~~~~~~~~l~~N~ 88 (300)
T 4az3_A 25 SGYLKGSGSKHLHYWFVESQK---------------DPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNP 88 (300)
T ss_dssp EEEEECSTTEEEEEEEECCSS---------------CTTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSSCEEECT
T ss_pred eeeeecCCCCeEEEEEEEcCC---------------CCCCCCEEEEECCCCcHHH-HHHHHhcCCCceecCCCccccccC
Confidence 346788788899998876532 1246899999999999888 66554321
Q ss_pred --hhccceEEecCCC-CCCCCCCCCC--CCChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhCcc-
Q 020916 87 --LTKKYSVYIPDLL-FFGGSITDEA--DRSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELYPN- 153 (320)
Q Consensus 87 --l~~~~~vi~~d~~-G~G~s~~~~~--~~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~p~- 153 (320)
+.+..+++.+|.| |.|.|..... ..+..+.++|+..+++.. ...+++|.|-|+||..+-.+|...-+
T Consensus 89 ~sW~~~an~lfiD~PvGtGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~ 168 (300)
T 4az3_A 89 YSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQD 168 (300)
T ss_dssp TCGGGSSEEEEECCSTTSTTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTC
T ss_pred ccHHhhhcchhhcCCCcccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhC
Confidence 1122689999966 8888865443 245556677777666532 34689999999999999988865322
Q ss_pred ---ccccEEEeccccc
Q 020916 154 ---LVQAMVVSGSILA 166 (320)
Q Consensus 154 ---~v~~lvl~~~~~~ 166 (320)
.++++++-++...
T Consensus 169 ~~inLkG~~iGNg~~d 184 (300)
T 4az3_A 169 PSMNLQGLAVGNGLSS 184 (300)
T ss_dssp TTSCEEEEEEESCCSB
T ss_pred CCcccccceecCCccC
Confidence 4788888777653
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.36 E-value=5.9e-06 Score=69.66 Aligned_cols=105 Identities=16% Similarity=0.110 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHH-----------------HhhccceEEecCC-CCCCCCCCCCCC----------CC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVG-----------------ALTKKYSVYIPDL-LFFGGSITDEAD----------RS 112 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~-----------------~l~~~~~vi~~d~-~G~G~s~~~~~~----------~~ 112 (320)
.+.|.+|+++|.++++. .+..+.+ .+.+..+++.+|. .|.|.|...... .+
T Consensus 65 ~~~Pl~lwlnGGPG~SS-~~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~ 143 (483)
T 1ac5_A 65 VDRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDED 143 (483)
T ss_dssp SSCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCS
T ss_pred cCCCEEEEECCCCchHh-hhhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCCcCcccccccccccCCC
Confidence 46899999999999988 6644331 1223378999996 699998654321 24
Q ss_pred hhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhC------------ccccccEEEeccccc
Q 020916 113 PTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELY------------PNLVQAMVVSGSILA 166 (320)
Q Consensus 113 ~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~------------p~~v~~lvl~~~~~~ 166 (320)
.+..++++..+++.. ...+++|.|+|+||..+..+|... +-.++++++-++...
T Consensus 144 ~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T 1ac5_A 144 LEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCccc
Confidence 566777777776653 346899999999999998887531 123678887776653
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=2.5e-06 Score=73.26 Aligned_cols=122 Identities=16% Similarity=0.082 Sum_probs=70.8
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccH--HHHH-HHhhc--cceEEecCCCC-
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTW--QFQV-GALTK--KYSVYIPDLLF- 100 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~--~~~~-~~l~~--~~~vi~~d~~G- 100 (320)
+|...+.++.+.... .....|+||++||.+.... ..| ..++ ..+.. .+.|+.+|+|.
T Consensus 95 edcl~l~v~~P~~~~---------------~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~ 159 (534)
T 1llf_A 95 EDCLTINVVRPPGTK---------------AGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVA 159 (534)
T ss_dssp SCCCEEEEEECTTCC---------------TTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCH
T ss_pred CCCeEEEEEECCCCC---------------CCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCC
Confidence 366777777664311 0135689999999763322 022 2233 23333 39999999994
Q ss_pred ---CCCCC----CCCCCCChhHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--------ccccccEEE
Q 020916 101 ---FGGSI----TDEADRSPTFQAQCLATGLAKL---G--VDKCVLVGFSYGGMVSFKVAELY--------PNLVQAMVV 160 (320)
Q Consensus 101 ---~G~s~----~~~~~~~~~~~~~~l~~~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~--------p~~v~~lvl 160 (320)
+..+. .......+.+....+..+.+.. + .++|.|+|+|.||..+..++... +..++++|+
T Consensus 160 ~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~ 239 (534)
T 1llf_A 160 SWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIM 239 (534)
T ss_dssp HHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEE
T ss_pred CCCCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhh
Confidence 21111 0011223344444444443332 2 35799999999998877666543 457899999
Q ss_pred ecccc
Q 020916 161 SGSIL 165 (320)
Q Consensus 161 ~~~~~ 165 (320)
.++..
T Consensus 240 ~Sg~~ 244 (534)
T 1llf_A 240 QSGAM 244 (534)
T ss_dssp ESCCS
T ss_pred hccCc
Confidence 88754
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.27 E-value=3.3e-06 Score=72.67 Aligned_cols=123 Identities=19% Similarity=0.132 Sum_probs=73.0
Q ss_pred cCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccH--HHHH-HHhhcc--ceEEecCCCC
Q 020916 28 IEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTW--QFQV-GALTKK--YSVYIPDLLF 100 (320)
Q Consensus 28 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~--~~~~-~~l~~~--~~vi~~d~~G 100 (320)
.+|...|.++.+.... .....|+||++||.+.... ..| ..++ +.++.. +.|+.+|+|.
T Consensus 102 sedcl~l~v~~P~~~~---------------~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl 166 (544)
T 1thg_A 102 NEDCLYLNVFRPAGTK---------------PDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRT 166 (544)
T ss_dssp CSCCCEEEEEEETTCC---------------TTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCC
T ss_pred CCCCeEEEEEeCCCCC---------------CCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCC
Confidence 3477788887764311 0135689999999764322 022 2233 334433 8999999994
Q ss_pred ----CCCCCC----CCCCCChhHHHHHHHHHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--------ccccccEE
Q 020916 101 ----FGGSIT----DEADRSPTFQAQCLATGLAKL---G--VDKCVLVGFSYGGMVSFKVAELY--------PNLVQAMV 159 (320)
Q Consensus 101 ----~G~s~~----~~~~~~~~~~~~~l~~~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~--------p~~v~~lv 159 (320)
+..+.. ......+.+....+..+.+.. + .++|.|+|+|.||.++..++... +..++++|
T Consensus 167 ~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i 246 (544)
T 1thg_A 167 GPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAI 246 (544)
T ss_dssp HHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEE
T ss_pred CcccCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceE
Confidence 211110 011223444444444443332 3 35799999999999988777652 45789999
Q ss_pred Eecccc
Q 020916 160 VSGSIL 165 (320)
Q Consensus 160 l~~~~~ 165 (320)
+.++..
T Consensus 247 ~~Sg~~ 252 (544)
T 1thg_A 247 LQSGGP 252 (544)
T ss_dssp EESCCC
T ss_pred Eecccc
Confidence 998754
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.14 E-value=5.1e-06 Score=71.83 Aligned_cols=103 Identities=16% Similarity=0.049 Sum_probs=62.1
Q ss_pred CCCeEEEEcCCCCCccc--cH------HHHHHHhhc-c-ceEEecCCC----CCCCCCCCC--CCCChhHHHHHHHHHHH
Q 020916 62 SKPVVVLVHGFAAEGIV--TW------QFQVGALTK-K-YSVYIPDLL----FFGGSITDE--ADRSPTFQAQCLATGLA 125 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~--~~------~~~~~~l~~-~-~~vi~~d~~----G~G~s~~~~--~~~~~~~~~~~l~~~l~ 125 (320)
..|+||++||.+..... .. ......|+. . +.|+.+++| |+..+.... ....+.+....+..+.+
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ 176 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHHHH
Confidence 46899999998632220 00 111234443 3 899999999 444332111 12234454444444444
Q ss_pred Hh---C--CCcEEEEEeChhHHHHHHHHHh--CccccccEEEeccc
Q 020916 126 KL---G--VDKCVLVGFSYGGMVSFKVAEL--YPNLVQAMVVSGSI 164 (320)
Q Consensus 126 ~~---~--~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~ 164 (320)
.. + .++|.|+|+|.||.++..++.. ....++++|+.++.
T Consensus 177 ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 177 NIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred HHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 33 3 3579999999999999887754 23468888888764
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=4.3e-06 Score=72.62 Aligned_cols=104 Identities=13% Similarity=-0.021 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCCCC---CccccHHHHHHHhhc-c-ceEEecCCC----CCCCCCC---------CCCCCChhHHHHHHHH
Q 020916 61 PSKPVVVLVHGFAA---EGIVTWQFQVGALTK-K-YSVYIPDLL----FFGGSIT---------DEADRSPTFQAQCLAT 122 (320)
Q Consensus 61 ~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~-~-~~vi~~d~~----G~G~s~~---------~~~~~~~~~~~~~l~~ 122 (320)
...|+||++||.+. +.. ........|.. . +.|+.+++| |+..... ......+.+....+..
T Consensus 139 ~~~PV~v~iHGGg~~~g~~~-~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 139 NGLPILIWIYGGGFMTGSAT-LDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp SSEEEEEEECCSTTTCCCTT-CGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCCC-CCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 35689999999753 222 22222345554 3 999999999 4433210 1112233343333333
Q ss_pred HHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 123 GLAKL---G--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 123 ~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
+.+.. + .++|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 33322 2 35799999999999888777642 34688889888754
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=5.2e-06 Score=71.93 Aligned_cols=101 Identities=17% Similarity=0.077 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCCCCcc--ccHHHHHHHhhcc--ceEEecCCC----CCCCCCCC--CCCCChhHHHHHHHHHHHH---hC
Q 020916 62 SKPVVVLVHGFAAEGI--VTWQFQVGALTKK--YSVYIPDLL----FFGGSITD--EADRSPTFQAQCLATGLAK---LG 128 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~--~~vi~~d~~----G~G~s~~~--~~~~~~~~~~~~l~~~l~~---~~ 128 (320)
..|+||++||.+.... ..|.. ..|+.. +.|+.+|+| |+..+... ..+..+.+....+..+.+. ++
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~fg 207 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFG 207 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHHhC
Confidence 4689999999763322 02322 334443 899999999 33332211 1223344544444444443 33
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCc---cccccEEEeccc
Q 020916 129 --VDKCVLVGFSYGGMVSFKVAELYP---NLVQAMVVSGSI 164 (320)
Q Consensus 129 --~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~ 164 (320)
.++|.|+|+|.||.++..++.... ..+.++|+.++.
T Consensus 208 gdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 208 GDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 357999999999999998886543 357888887754
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00011 Score=56.45 Aligned_cols=126 Identities=17% Similarity=0.161 Sum_probs=79.1
Q ss_pred eEEEcC--CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHH--------------
Q 020916 24 HAVEIE--PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGA-------------- 86 (320)
Q Consensus 24 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~-------------- 86 (320)
.++.+. .|..|.||.......+ ..++|.+|+++|.++++. .+ ..+.+.
T Consensus 27 Gyv~v~~~~~~~lFywf~es~~~~--------------p~~~Pl~lWlnGGPGcSS-~~~g~~~E~GP~~v~~~~~~l~~ 91 (270)
T 1gxs_A 27 GYVTIDDNNGRALYYWFQEADTAD--------------PAAAPLVLWLNGGPGCSS-IGLGAMQELGAFRVHTNGESLLL 91 (270)
T ss_dssp EEEEEETTTTEEEEEEEECCCSSC--------------GGGSCEEEEEECTTTBCT-TTTHHHHTTSSEEECTTSSCEEE
T ss_pred EEEEcCCCCCcEEEEEEEEecCCC--------------CCCCCEEEEecCCCcccc-hhhhhHHhccCceecCCCCccee
Confidence 355553 3668888766541111 136899999999999888 64 544310
Q ss_pred ----hhccceEEecCC-CCCCCCCCCCC---CCChhHHHHHHHHHHHH-------hCCCcEEEEEeChhHHHHHHHHHh-
Q 020916 87 ----LTKKYSVYIPDL-LFFGGSITDEA---DRSPTFQAQCLATGLAK-------LGVDKCVLVGFSYGGMVSFKVAEL- 150 (320)
Q Consensus 87 ----l~~~~~vi~~d~-~G~G~s~~~~~---~~~~~~~~~~l~~~l~~-------~~~~~~~lvGhS~Gg~~a~~~a~~- 150 (320)
+.+..+++.+|. .|.|.|..... ..+....++|+..+++. +...+++|.|.| |-. +-.+|..
T Consensus 92 N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~y-vP~la~~i 169 (270)
T 1gxs_A 92 NEYAWNKAANILFAESPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHF-IPQLSQVV 169 (270)
T ss_dssp CTTCGGGTSEEEEECCSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTH-HHHHHHHH
T ss_pred CccchhccccEEEEeccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-Ccc-hHHHHHHH
Confidence 223378999995 69999865432 13444556776666653 244589999999 644 4434422
Q ss_pred ---C----ccccccEEEeccccc
Q 020916 151 ---Y----PNLVQAMVVSGSILA 166 (320)
Q Consensus 151 ---~----p~~v~~lvl~~~~~~ 166 (320)
. .-.++|+++.++...
T Consensus 170 ~~~n~~~~~inLkGi~ign~~~d 192 (270)
T 1gxs_A 170 YRNRNNSPFINFQGLLVSSGLTN 192 (270)
T ss_dssp HHTTTTCTTCEEEEEEEESCCCB
T ss_pred HhccccccceeeeeEEEeCCccC
Confidence 1 124788888887764
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=1.6e-05 Score=61.85 Aligned_cols=82 Identities=15% Similarity=0.088 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEe-cCCCCCCCCCCCCC-CCChhHHHHHHHHHHHHh----CCCcEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYI-PDLLFFGGSITDEA-DRSPTFQAQCLATGLAKL----GVDKCV 133 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~-~d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~----~~~~~~ 133 (320)
..+..||.+||... +.+.+.+. +.+.. .|.++.+. .... ......+.+++.+.++.+ ...+++
T Consensus 72 ~~~~iVva~RGT~~--------~~d~l~d~~~~~~~~~~~~~~~~--vh~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 141 (269)
T 1tib_A 72 TNKLIVLSFRGSRS--------IENWIGNLNFDLKEINDICSGCR--GHDGFTSSWRSVADTLRQKVEDAVREHPDYRVV 141 (269)
T ss_dssp TTTEEEEEECCCSC--------THHHHTCCCCCEEECTTTSTTCE--EEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCEEEEEEeCCCC--------HHHHHHhcCeeeeecCCCCCCCE--ecHHHHHHHHHHHHHHHHHHHHHHHHCCCceEE
Confidence 46778999999862 22344444 66655 56554110 0000 012334455666655544 335899
Q ss_pred EEEeChhHHHHHHHHHhCc
Q 020916 134 LVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p 152 (320)
+.||||||.+|..++....
T Consensus 142 l~GHSLGGalA~l~a~~l~ 160 (269)
T 1tib_A 142 FTGHSLGGALATVAGADLR 160 (269)
T ss_dssp EEEETHHHHHHHHHHHHHT
T ss_pred EecCChHHHHHHHHHHHHH
Confidence 9999999999999998754
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.82 E-value=6.7e-05 Score=52.69 Aligned_cols=63 Identities=24% Similarity=0.343 Sum_probs=55.3
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC----------------------CCCeEEEEecCCCcccccCChHHHHHHHHH
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG----------------------ADHVTFQGIKKAGHLVHLERPCAYNRCLKQ 306 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 306 (320)
..++||.+|+.|.+++.-..+.+.+.+. ..+.++..+.+|||+...++|+...+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 3579999999999999998888888774 026888999999999999999999999999
Q ss_pred HHHhh
Q 020916 307 FLASL 311 (320)
Q Consensus 307 fl~~~ 311 (320)
||...
T Consensus 144 fl~~~ 148 (153)
T 1whs_B 144 FLQGK 148 (153)
T ss_dssp HHHTC
T ss_pred HHCCC
Confidence 99864
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.74 E-value=9.7e-05 Score=57.47 Aligned_cols=62 Identities=15% Similarity=0.020 Sum_probs=35.8
Q ss_pred cceEEecCCCCC-CCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 90 KYSVYIPDLLFF-GGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 90 ~~~vi~~d~~G~-G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
...+...++||. |..-.......+..+.+++.+.++.+ ...++++.||||||.+|..++...
T Consensus 91 d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 355666677763 21111001122334445555444433 234599999999999999998765
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00024 Score=53.94 Aligned_cols=99 Identities=15% Similarity=0.061 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCCCCcc---ccHHHHHHHhhccceEEec-CCCCCCCCCCCCCCC--ChhHHHHHHHHHHHH----hCCCc
Q 020916 62 SKPVVVLVHGFAAEGI---VTWQFQVGALTKKYSVYIP-DLLFFGGSITDEADR--SPTFQAQCLATGLAK----LGVDK 131 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~---~~~~~~~~~l~~~~~vi~~-d~~G~G~s~~~~~~~--~~~~~~~~l~~~l~~----~~~~~ 131 (320)
++|+|++.+|.+.... ..-..+.+.|...+.+=.+ ++|-... .+ +...=++++...++. ....+
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~~------~y~~S~~~G~~~~~~~i~~~~~~CP~tk 75 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAAF------PMWPSVEKGVAELILQIELKLDADPYAD 75 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCSS------SCHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCccc------CccchHHHHHHHHHHHHHHHHhhCCCCe
Confidence 5899999999977422 1245677777665544444 3553211 12 223334444444443 23468
Q ss_pred EEEEEeChhHHHHHHHHHh-----------CccccccEEEeccccc
Q 020916 132 CVLVGFSYGGMVSFKVAEL-----------YPNLVQAMVVSGSILA 166 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~-----------~p~~v~~lvl~~~~~~ 166 (320)
++|.|+|.||.++-.++.. ..++|.++++++-+..
T Consensus 76 iVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP~r 121 (254)
T 3hc7_A 76 FAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMR 121 (254)
T ss_dssp EEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCTTC
T ss_pred EEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCCCC
Confidence 9999999999999888755 2357888888876554
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00047 Score=53.87 Aligned_cols=83 Identities=17% Similarity=0.010 Sum_probs=45.0
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVLV 135 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~lv 135 (320)
..+..||.+||.... . +.+... +.+...|....|... ..-......+.+++.+.++.+ ...++++.
T Consensus 72 ~~~~iVvafRGT~~~-~-------d~~~d~~~~~~~~~~~~~~~vh-~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vt 142 (279)
T 1tia_A 72 TNSAVVLAFRGSYSV-R-------NWVADATFVHTNPGLCDGCLAE-LGFWSSWKLVRDDIIKELKEVVAQNPNYELVVV 142 (279)
T ss_pred CCCEEEEEEeCcCCH-H-------HHHHhCCcEeecCCCCCCCccC-hhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 467789999998632 1 222222 444444432111110 000012223334444444433 33589999
Q ss_pred EeChhHHHHHHHHHhCc
Q 020916 136 GFSYGGMVSFKVAELYP 152 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p 152 (320)
|||+||.+|..++....
T Consensus 143 GHSLGGalA~l~a~~l~ 159 (279)
T 1tia_A 143 GHSLGAAVATLAATDLR 159 (279)
T ss_pred ecCHHHHHHHHHHHHHH
Confidence 99999999999987754
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00082 Score=47.29 Aligned_cols=63 Identities=27% Similarity=0.361 Sum_probs=52.9
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC---------------------------CCCeEEEEecCCCcccccCChHHHH
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG---------------------------ADHVTFQGIKKAGHLVHLERPCAYN 301 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~gH~~~~~~~~~~~ 301 (320)
..++|+.+|+.|.+++.-..+.+.+.+. ..+.+++.+.+|||+...++|+...
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 3579999999999999888888777664 0245677888999999999999999
Q ss_pred HHHHHHHHhh
Q 020916 302 RCLKQFLASL 311 (320)
Q Consensus 302 ~~i~~fl~~~ 311 (320)
+.+..||...
T Consensus 143 ~m~~~fl~g~ 152 (155)
T 4az3_B 143 TMFSRFLNKQ 152 (155)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999999753
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0021 Score=45.31 Aligned_cols=63 Identities=30% Similarity=0.424 Sum_probs=53.1
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC------------C-------------CCeEEEEecCCCcccccCChHHHHHH
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG------------A-------------DHVTFQGIKKAGHLVHLERPCAYNRC 303 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------~-------------~~~~~~~~~~~gH~~~~~~~~~~~~~ 303 (320)
..++||.+|+.|-+++.-..+.+.+.+. . .+.++..+.++||+...++|+...+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 3579999999999999988888877663 1 13567788999999999999999999
Q ss_pred HHHHHHhh
Q 020916 304 LKQFLASL 311 (320)
Q Consensus 304 i~~fl~~~ 311 (320)
+..|+...
T Consensus 146 ~~~fl~g~ 153 (158)
T 1gxs_B 146 FKQFLKGE 153 (158)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 99999864
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0017 Score=50.45 Aligned_cols=36 Identities=14% Similarity=0.102 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 116 QAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 116 ~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
+.+++...++.+ ...++++.|||+||.+|..++...
T Consensus 119 ~~~~~~~~l~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 119 VVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 344444444433 345899999999999999988765
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.93 E-value=0.011 Score=42.94 Aligned_cols=100 Identities=11% Similarity=0.013 Sum_probs=58.0
Q ss_pred eEEEEcCCCCCcc------ccHHHHHHHhhcc-ceEEec--CCCCCCCCCCCCCCCChhHHHHHHHHHH----HHhCCCc
Q 020916 65 VVVLVHGFAAEGI------VTWQFQVGALTKK-YSVYIP--DLLFFGGSITDEADRSPTFQAQCLATGL----AKLGVDK 131 (320)
Q Consensus 65 ~vv~lhG~~~~~~------~~~~~~~~~l~~~-~~vi~~--d~~G~G~s~~~~~~~~~~~~~~~l~~~l----~~~~~~~ 131 (320)
.||+..|.+.... .....+...+... ..|..+ ++|-.-..... ...+...-++++...+ ..-...+
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~tk 98 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNAL-PRGTSSAAIREMLGLFQQANTKCPDAT 98 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccC-ccccHHHHHHHHHHHHHHHHHhCCCCc
Confidence 5666666654321 0122233344323 678888 78743211100 0112233344444444 4444578
Q ss_pred EEEEEeChhHHHHHHHHHhCc----cccccEEEecccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYP----NLVQAMVVSGSIL 165 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~~ 165 (320)
++|+|+|.|+.++-.++...| ++|.++++++-+.
T Consensus 99 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 136 (197)
T 3qpa_A 99 LIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTK 136 (197)
T ss_dssp EEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTT
T ss_pred EEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCc
Confidence 999999999999988877655 5788999888654
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0051 Score=45.45 Aligned_cols=101 Identities=20% Similarity=0.115 Sum_probs=55.1
Q ss_pred eEEEEcCCCCCcc-ccHHHHHHHhhcc---ceEEecCCCCC-CCCCCCCCCC--ChhHHHHHHHHHHHHh----CCCcEE
Q 020916 65 VVVLVHGFAAEGI-VTWQFQVGALTKK---YSVYIPDLLFF-GGSITDEADR--SPTFQAQCLATGLAKL----GVDKCV 133 (320)
Q Consensus 65 ~vv~lhG~~~~~~-~~~~~~~~~l~~~---~~vi~~d~~G~-G~s~~~~~~~--~~~~~~~~l~~~l~~~----~~~~~~ 133 (320)
.||+..|.+.... .....+.+.|.+. -.+..+++|-. |.+......+ +...=++++...++.. ...+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 4556666554321 0112444444433 36777888853 2211111111 1222234444444433 356899
Q ss_pred EEEeChhHHHHHHHHHh--------------Cc----cccccEEEecccc
Q 020916 134 LVGFSYGGMVSFKVAEL--------------YP----NLVQAMVVSGSIL 165 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~--------------~p----~~v~~lvl~~~~~ 165 (320)
|+|+|.|+.++-.++.. .| ++|.++++++-+.
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1g66_A 86 LVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCCC
Confidence 99999999999888741 22 4688888887654
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0032 Score=48.58 Aligned_cols=24 Identities=17% Similarity=0.087 Sum_probs=20.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
...++++.|||+||.+|..++...
T Consensus 123 p~~~i~vtGHSLGGalA~l~a~~l 146 (261)
T 1uwc_A 123 PDYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHH
T ss_pred CCceEEEEecCHHHHHHHHHHHHH
Confidence 345799999999999999888764
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0057 Score=47.58 Aligned_cols=46 Identities=11% Similarity=0.061 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC----ccccccEEEeccc
Q 020916 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY----PNLVQAMVVSGSI 164 (320)
Q Consensus 119 ~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~ 164 (320)
.+..+++.....++++.|||+||.+|..++... |.....++..+++
T Consensus 127 ~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~P 176 (279)
T 3uue_A 127 AVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLP 176 (279)
T ss_dssp HHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCC
T ss_pred HHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 334444444556899999999999999888653 3333344444443
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0054 Score=45.32 Aligned_cols=101 Identities=14% Similarity=-0.006 Sum_probs=55.4
Q ss_pred eEEEEcCCCCCcc-ccHHHHHHHhhcc---ceEEecCCCCC-CCCCCCCCCC--ChhHHHHHHHHHHHH----hCCCcEE
Q 020916 65 VVVLVHGFAAEGI-VTWQFQVGALTKK---YSVYIPDLLFF-GGSITDEADR--SPTFQAQCLATGLAK----LGVDKCV 133 (320)
Q Consensus 65 ~vv~lhG~~~~~~-~~~~~~~~~l~~~---~~vi~~d~~G~-G~s~~~~~~~--~~~~~~~~l~~~l~~----~~~~~~~ 133 (320)
.||+..|.+.... .....+.+.|.+. -.+..+++|-. |.+......+ +...=++++...++. -...+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 4566666554431 0123445555443 26777888854 2211111111 112223444444443 3356899
Q ss_pred EEEeChhHHHHHHHHHh--------------Cc----cccccEEEecccc
Q 020916 134 LVGFSYGGMVSFKVAEL--------------YP----NLVQAMVVSGSIL 165 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~--------------~p----~~v~~lvl~~~~~ 165 (320)
|+|+|.|+.++-.++.. .| ++|.++++++-+.
T Consensus 86 l~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP~ 135 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp EEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCTT
T ss_pred EEEeCchHHHHHHHHhccCcccccccCCCCCCChHHhccEEEEEEEcCCc
Confidence 99999999999887741 12 4688888887654
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0041 Score=47.78 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=23.0
Q ss_pred HHHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 120 l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
+..+++.....++++.|||+||.+|..++..
T Consensus 114 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 114 VKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 3334444444689999999999999988765
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.026 Score=41.15 Aligned_cols=101 Identities=15% Similarity=-0.000 Sum_probs=57.7
Q ss_pred CeEEEEcCCCCCccc---cHHHHHHH----hhcc-ceEEec--CCCCCCCCCCCCCCCChhHHHHHHHHHH----HHhCC
Q 020916 64 PVVVLVHGFAAEGIV---TWQFQVGA----LTKK-YSVYIP--DLLFFGGSITDEADRSPTFQAQCLATGL----AKLGV 129 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~---~~~~~~~~----l~~~-~~vi~~--d~~G~G~s~~~~~~~~~~~~~~~l~~~l----~~~~~ 129 (320)
-.||+..|.+..... .-..+.+. +... ..|..+ ++|-.-..... ...+...-++++...+ ..-..
T Consensus 26 v~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~-~~~S~~~G~~~~~~~i~~~~~~CP~ 104 (201)
T 3dcn_A 26 VIYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFL-PDGTSSAAINEARRLFTLANTKCPN 104 (201)
T ss_dssp EEEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccc-cCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 356666666544320 12234444 4322 678888 67743211000 0112233344444444 44455
Q ss_pred CcEEEEEeChhHHHHHHHHHhCc----cccccEEEecccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYP----NLVQAMVVSGSIL 165 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~~ 165 (320)
.+++|+|+|.|+.++-.++...| ++|.++++++-+.
T Consensus 105 tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 144 (201)
T 3dcn_A 105 AAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYTK 144 (201)
T ss_dssp SEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCTT
T ss_pred CcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCcc
Confidence 78999999999999988876554 5788999888654
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.061 Score=38.73 Aligned_cols=82 Identities=12% Similarity=-0.070 Sum_probs=48.7
Q ss_pred HHHHhhccceEEecC--CCCCCCCCCCCCCCChhHHHHHHHHHH----HHhCCCcEEEEEeChhHHHHHHHHHhCc----
Q 020916 83 QVGALTKKYSVYIPD--LLFFGGSITDEADRSPTFQAQCLATGL----AKLGVDKCVLVGFSYGGMVSFKVAELYP---- 152 (320)
Q Consensus 83 ~~~~l~~~~~vi~~d--~~G~G~s~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~lvGhS~Gg~~a~~~a~~~p---- 152 (320)
+...+.....|..++ +|-.-..... ...+...-++++..++ ..-...+++|+|+|.|+.++-.++...|
T Consensus 41 L~~~~~~~v~v~~V~~~YpA~~~~~~~-~~~s~~~g~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~ 119 (187)
T 3qpd_A 41 LKLARSGDVACQGVGPRYTADLPSNAL-PEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQ 119 (187)
T ss_dssp HHHHSTTCEEEEECCSSCCCCGGGGGS-TTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHH
T ss_pred HHHHcCCCceEEeeCCcccCcCccccc-cccchhHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhh
Confidence 334443336788888 7743210000 0111222233444343 4444578999999999999998876554
Q ss_pred cccccEEEecccc
Q 020916 153 NLVQAMVVSGSIL 165 (320)
Q Consensus 153 ~~v~~lvl~~~~~ 165 (320)
++|.++++++-+.
T Consensus 120 ~~V~avvlfGdP~ 132 (187)
T 3qpd_A 120 DKIKGVVLFGYTR 132 (187)
T ss_dssp HHEEEEEEESCTT
T ss_pred hhEEEEEEeeCCc
Confidence 4788999888554
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0062 Score=47.94 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=24.4
Q ss_pred HHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 119 ~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+..+++.....++++.|||+||.+|..++...
T Consensus 143 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 143 KLDSVIEQYPDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEeccChHHHHHHHHHHHH
Confidence 344444444446899999999999999888754
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0051 Score=48.71 Aligned_cols=24 Identities=33% Similarity=0.277 Sum_probs=19.9
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
...++++.|||+||.+|..++...
T Consensus 134 p~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 134 PSFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHHH
T ss_pred CCCceEEeecCHHHHHHHHHHHHH
Confidence 345799999999999999887653
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.03 Score=43.83 Aligned_cols=83 Identities=13% Similarity=0.096 Sum_probs=48.3
Q ss_pred HHHHhhcc-ceEEecCCCCCCCCCCC-CCCC----ChhHHHHHHHHHHHH----hCCCcEEEEEeChhHHHHHHHHHh--
Q 020916 83 QVGALTKK-YSVYIPDLLFFGGSITD-EADR----SPTFQAQCLATGLAK----LGVDKCVLVGFSYGGMVSFKVAEL-- 150 (320)
Q Consensus 83 ~~~~l~~~-~~vi~~d~~G~G~s~~~-~~~~----~~~~~~~~l~~~l~~----~~~~~~~lvGhS~Gg~~a~~~a~~-- 150 (320)
+...+... ..++.++++-.-..... .... +..+=++++...++. --..+++|+|+|.|+.++-.++..
T Consensus 76 L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~ 155 (302)
T 3aja_A 76 LAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIG 155 (302)
T ss_dssp HHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhcc
Confidence 33444333 67888888754211000 0111 112223344444433 334689999999999999887743
Q ss_pred ------CccccccEEEecccc
Q 020916 151 ------YPNLVQAMVVSGSIL 165 (320)
Q Consensus 151 ------~p~~v~~lvl~~~~~ 165 (320)
.+++|.++++++-+.
T Consensus 156 ~g~~~~~~~~V~aVvLfGdP~ 176 (302)
T 3aja_A 156 NGRGPVDEDLVLGVTLIADGR 176 (302)
T ss_dssp TTCSSSCGGGEEEEEEESCTT
T ss_pred CCCCCCChHHEEEEEEEeCCC
Confidence 346799999888654
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.042 Score=40.40 Aligned_cols=95 Identities=12% Similarity=0.038 Sum_probs=56.9
Q ss_pred CeEEEEcCCCCCcc--ccHHHHHHH-hhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCcEEE
Q 020916 64 PVVVLVHGFAAEGI--VTWQFQVGA-LTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDKCVL 134 (320)
Q Consensus 64 ~~vv~lhG~~~~~~--~~~~~~~~~-l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~l 134 (320)
-.||+..|.+.... .....++.. |... -....+++|--- . .. + ..-++++...|+.. ...+++|
T Consensus 9 v~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~---~--y~-S-~~G~~~~~~~i~~~~~~CP~tkivl 81 (205)
T 2czq_A 9 YVLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADF---S--QN-S-AAGTADIIRRINSGLAANPNVCYIL 81 (205)
T ss_dssp EEEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCT---T--CC-C-HHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred eEEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccC---C--Cc-C-HHHHHHHHHHHHHHHhhCCCCcEEE
Confidence 35566666554432 123455555 5444 234677776321 1 11 3 44455555555443 3468999
Q ss_pred EEeChhHHHHHHHHHhC--c----cccccEEEecccc
Q 020916 135 VGFSYGGMVSFKVAELY--P----NLVQAMVVSGSIL 165 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~--p----~~v~~lvl~~~~~ 165 (320)
+|+|.|+.++-.++... + ++|.++++++-+.
T Consensus 82 ~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP~ 118 (205)
T 2czq_A 82 QGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNPD 118 (205)
T ss_dssp EEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCTT
T ss_pred EeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCCC
Confidence 99999999998877554 3 4788999988543
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.68 E-value=0.014 Score=49.36 Aligned_cols=64 Identities=17% Similarity=0.273 Sum_probs=53.2
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHHHHhC-----------------------------------CCCeEEEEecCCCcccc
Q 020916 249 PQRVHLLWGEDDQIFNVELAHNMKEQLG-----------------------------------ADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 249 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~gH~~~ 293 (320)
..+|||.+|+.|-+++.-..+.+.+.+. ..+.+++.+.+|||+..
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 3689999999999999888777665542 01366788999999999
Q ss_pred cCChHHHHHHHHHHHHhhh
Q 020916 294 LERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 294 ~~~~~~~~~~i~~fl~~~~ 312 (320)
.++|+...+.|..||.+..
T Consensus 452 ~dqP~~al~m~~~fl~~~~ 470 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSNDVM 470 (483)
T ss_dssp HHCHHHHHHHHHHHTTCCE
T ss_pred chhHHHHHHHHHHHHCCcc
Confidence 9999999999999998754
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.09 E-value=0.049 Score=43.76 Aligned_cols=21 Identities=33% Similarity=0.393 Sum_probs=18.8
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 020916 130 DKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.++++.|||+||.+|..+|..
T Consensus 166 ~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 166 AKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp EEEEEEEETHHHHHHHHHHHH
T ss_pred ceEEEecCChHHHHHHHHHHH
Confidence 579999999999999988865
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=91.94 E-value=0.02 Score=46.86 Aligned_cols=35 Identities=17% Similarity=0.073 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhC
Q 020916 117 AQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 117 ~~~l~~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.+.+..+++.... .++++.|||+||.+|..+|...
T Consensus 213 l~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 213 LREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 3444444444332 3689999999999999888653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 320 | ||||
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 3e-21 | |
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 2e-20 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 1e-19 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 6e-18 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 4e-17 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 7e-16 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 7e-16 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 1e-15 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 2e-15 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 3e-15 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 3e-14 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 1e-13 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 1e-13 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 2e-13 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 2e-13 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 3e-13 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 1e-12 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 1e-12 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 2e-12 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 2e-12 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 4e-12 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 6e-12 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 8e-12 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 8e-12 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 8e-12 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 1e-10 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 2e-10 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 1e-09 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 1e-09 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 2e-09 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 4e-09 | |
| d2h7xa1 | 283 | c.69.1.22 (A:9-291) Picromycin polyketide synthase | 1e-07 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 2e-06 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 3e-06 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 4e-06 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 5e-06 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 2e-05 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 2e-04 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 2e-04 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 2e-04 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 4e-04 | |
| d1r88a_ | 267 | c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tu | 0.001 | |
| d1uxoa_ | 186 | c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus | 0.003 |
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.0 bits (219), Expect = 3e-21
Identities = 35/270 (12%), Positives = 75/270 (27%), Gaps = 26/270 (9%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK---YSVYIPDLLFFGGSITDEADRSPTFQAQ 118
S V++VHG +++ + + + V + DL S+ ++ F+
Sbjct: 1 SYKPVIVVHGLFD-SSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREA 59
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
+ + L+ +S GG+V + + + +S S M + L
Sbjct: 60 VVP--IMAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKW 117
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEG--- 235
L +S L S+ Y LY + + ER
Sbjct: 118 LFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWR 177
Query: 236 ----------LLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG-------AD 278
L+ D + + + ++ + +E
Sbjct: 178 KNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARG 237
Query: 279 HVTFQGIKKAGHLVHLERPCAYNRCLKQFL 308
+ + H Y C++ +L
Sbjct: 238 AIVRCPMAGISHTAWHSNRTLYETCIEPWL 267
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 86.8 bits (213), Expect = 2e-20
Identities = 48/248 (19%), Positives = 93/248 (37%), Gaps = 6/248 (2%)
Query: 64 PVVVLVHGFA--AEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRS-PTFQAQCL 120
V+L+HG W+ + AL+K Y V PD++ FG + E +
Sbjct: 24 QPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHI 83
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
+ L ++K +VG ++GG ++ A Y V MV+ G+ D N
Sbjct: 84 IGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY 143
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240
S + + L +L + + + F E F++ +++
Sbjct: 144 TPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQE-SFSSMFPEPRQRWIDALAS 202
Query: 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300
D + P ++ G +DQ+ + + + E + D + GH +E+ +
Sbjct: 203 SDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI--DRAQLHVFGRCGHWTQIEQTDRF 260
Query: 301 NRCLKQFL 308
NR + +F
Sbjct: 261 NRLVVEFF 268
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 85.3 bits (209), Expect = 1e-19
Identities = 40/268 (14%), Positives = 81/268 (30%), Gaps = 19/268 (7%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQC 119
V+ +HG W+ + + + PDL+ G S + D +
Sbjct: 26 PRDGTPVLFLHGNPT-SSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRY 84
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTD---------- 169
L + LG+++ VLV +G + F A+ P V+ + I +
Sbjct: 85 LDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARE 144
Query: 170 ------SINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMF 223
+ + + ++ E +LP V + + Y++ + +
Sbjct: 145 TFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPN 204
Query: 224 ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ 283
L+ + P L WG + A + E L +
Sbjct: 205 EIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESL--PNCKTV 262
Query: 284 GIKKAGHLVHLERPCAYNRCLKQFLASL 311
I H + + P + ++L L
Sbjct: 263 DIGPGLHYLQEDNPDLIGSEIARWLPGL 290
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 79.5 bits (194), Expect = 6e-18
Identities = 46/253 (18%), Positives = 89/253 (35%), Gaps = 11/253 (4%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
+VL+HG+ V W+ L+ +++++ DL FG S A L
Sbjct: 10 GNVHLVLLHGWGLNAEV-WRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ 68
Query: 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV 181
DK + +G+S GG+V+ ++A +P V+A+V S + + +
Sbjct: 69 QAP-----DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVL 123
Query: 182 SSSSELLLPNSVKGLKALLSVATYKKLWFPS---CLYKDFLEVMFANRKERAELLEGLLI 238
+ + L + + ++ L++ T L K L + LE L
Sbjct: 124 AGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKT 183
Query: 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298
+ + N L+G D + ++ + + H KA H + P
Sbjct: 184 VDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP--HSESYIFAKAAHAPFISHPA 241
Query: 299 AYNRCLKQFLASL 311
+ L +
Sbjct: 242 EFCHLLVALKQRV 254
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 77.6 bits (189), Expect = 4e-17
Identities = 46/251 (18%), Positives = 86/251 (34%), Gaps = 8/251 (3%)
Query: 62 SKPVVVLVHGF--AAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQC 119
V+L+HG AE W+ + L + Y V D+L FG + + + + + +
Sbjct: 21 KGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRH 80
Query: 120 LATGLAKL-GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
L + + K +VG S GG V+ L+ LV A+V+ GS + + +
Sbjct: 81 LHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPII 140
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI 238
+ ++ + Y A + E +
Sbjct: 141 NYDFTREGMVHLVKALTNDGF---KIDDAMINSRYTYATDEATRKAYVATMQWIREQGGL 197
Query: 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298
+ ++ G+DD++ VE A+ + + D I GH +E P
Sbjct: 198 FYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI--DDSWGYIIPHCGHWAMIEHPE 255
Query: 299 AYNRCLKQFLA 309
+ FL+
Sbjct: 256 DFANATLSFLS 266
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 74.2 bits (180), Expect = 7e-16
Identities = 53/262 (20%), Positives = 94/262 (35%), Gaps = 16/262 (6%)
Query: 61 PSKPVVVLVHGFA--AEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ-- 116
P P VVL+HG A W+ + L + + V PDL+ FG S E
Sbjct: 24 PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWV 83
Query: 117 ---AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173
+ + + G++K +VG S GG V+ ++ P + + GS+ A ++
Sbjct: 84 GMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPP 143
Query: 174 TNLNRLGVSSSSEL-----LLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKE 228
L + L L+ + V + + K F + + +
Sbjct: 144 ELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFES 203
Query: 229 RAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKA 288
+E L+I P V + G D+I ++ + + + L H + +
Sbjct: 204 MKAGMESLVIPPATL--GRLPHDVLVFHGRQDRIVPLDTSLYLTKHL--KHAELVVLDRC 259
Query: 289 GHLVHLERPCAYNRCLKQFLAS 310
GH LER A L + +
Sbjct: 260 GHWAQLERWDAMGPMLMEHFRA 281
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 74.2 bits (180), Expect = 7e-16
Identities = 41/258 (15%), Positives = 73/258 (28%), Gaps = 16/258 (6%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEA-DRSPTFQAQ 118
P+VVLVHG G WQ + L + + DL G + + + +
Sbjct: 14 ARTPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMI 72
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQA-----MVVSGSILAMTDSINE 173
+LVG+S GG + + L +
Sbjct: 73 EQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAA 132
Query: 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELL 233
+ + V +V + L + ++
Sbjct: 133 RWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLAT 192
Query: 234 EGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293
P + +H + GE D F + E G + AGH VH
Sbjct: 193 SLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAESSGLSYSQVAQ---AGHNVH 244
Query: 294 LERPCAYNRCLKQFLASL 311
E+P A+ + ++ + S+
Sbjct: 245 HEQPQAFAKIVQAMIHSI 262
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 74.1 bits (180), Expect = 1e-15
Identities = 36/273 (13%), Positives = 74/273 (27%), Gaps = 26/273 (9%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRS-----PTFQ 116
+ ++ HG W+ + + DL+ G S + +
Sbjct: 27 TGDPILFQHGNPT-SSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHR 85
Query: 117 AQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176
A A D+ VLV +G + F A + VQ + +I + +
Sbjct: 86 DYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQ 145
Query: 177 NRLGV-----SSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAE 231
+R + EL+L ++V + L + Y++ R+
Sbjct: 146 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 205
Query: 232 LLEGLLISNKDPTV-----------PNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280
+ I+ V P + E + + + +
Sbjct: 206 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTTGRMRDFCRTWPNQTEI 265
Query: 281 TFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313
T H + + P + F+ L
Sbjct: 266 TV----AGAHFIQEDSPDEIGAAIAAFVRRLRP 294
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 73.3 bits (178), Expect = 2e-15
Identities = 45/255 (17%), Positives = 84/255 (32%), Gaps = 15/255 (5%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGA----LTKKYSVYIPDLL-FFGGSITDEADRSPTFQAQ 118
V+++HG G W + Y V + D F ++ A+
Sbjct: 31 ETVIMLHGGGP-GAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNAR 89
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
+ + L +D+ LVG + GG + A YP+ + +++ G +
Sbjct: 90 AVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAP--MPM 147
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAEL-----L 233
G+ +L S + LK +L V Y + L + E + +
Sbjct: 148 EGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQK 207
Query: 234 EGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293
L + + + + WG DD+ ++ + + D K GH
Sbjct: 208 APLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI--DDARLHVFSKCGHWAQ 265
Query: 294 LERPCAYNRCLKQFL 308
E +NR + FL
Sbjct: 266 WEHADEFNRLVIDFL 280
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 72.3 bits (175), Expect = 3e-15
Identities = 47/256 (18%), Positives = 82/256 (32%), Gaps = 11/256 (4%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
S +V HG+ +W+ Q+ L + Y V D G S + A L
Sbjct: 18 SGQPIVFSHGWPL-NADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDL 76
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
A + L + VL GFS GG + + A S + E N L
Sbjct: 77 AQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP 136
Query: 181 VS---SSSELLLPNSVKGLKALLSVATYK-----KLWFPSCLYKDFLEVMFANRKERAEL 232
+ + L + + K L S + + +L+ M A K +
Sbjct: 137 MEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDC 196
Query: 233 LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292
++ ++ + ++ G+ DQ+ +E + L T + A H +
Sbjct: 197 IKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAAL-VKGSTLKIYSGAPHGL 255
Query: 293 HLERPCAYNRCLKQFL 308
N L F+
Sbjct: 256 TDTHKDQLNADLLAFI 271
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.9 bits (169), Expect = 3e-14
Identities = 52/291 (17%), Positives = 101/291 (34%), Gaps = 45/291 (15%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTF--QAQ 118
S P V L HGF +W++Q+ AL + Y V D+ +G S +
Sbjct: 31 SGPAVCLCHGFPE-SWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCK 89
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET---- 174
+ T L KLG+ + V +G +GGM+ + +A YP V+A+ + +
Sbjct: 90 EMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESI 149
Query: 175 -------------------NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS--- 212
+S + + L S + + ++ V L+ S
Sbjct: 150 KANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEE 209
Query: 213 -------------CLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGED 259
+ F + F +E ++ E
Sbjct: 210 PSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEK 269
Query: 260 DQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
D + +++ +M++ + H+ I+ GH +++P N+ L ++L S
Sbjct: 270 DFVLVPQMSQHMEDWI--PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDS 318
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 67.7 bits (163), Expect = 1e-13
Identities = 48/260 (18%), Positives = 74/260 (28%), Gaps = 15/260 (5%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
S VVL+HG+ +W+ Q L + Y V D FGGS A L
Sbjct: 22 SGQPVVLIHGYPL-DGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADL 80
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL- 179
T L L + VLVGFS G + Y + A + + L + N +
Sbjct: 81 HTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVP 140
Query: 180 ---------GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA 230
+ K L + +
Sbjct: 141 QEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAV 200
Query: 231 ELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKAG 289
+ V + +L G D I ++ A + + + ++ A
Sbjct: 201 VPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV--PEADYVEVEGAP 258
Query: 290 HLVHLERPCAYNRCLKQFLA 309
H + N LK FLA
Sbjct: 259 HGLLWTHADEVNAALKTFLA 278
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 67.2 bits (162), Expect = 1e-13
Identities = 37/254 (14%), Positives = 74/254 (29%), Gaps = 11/254 (4%)
Query: 67 VLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGS--ITDEADRSPTFQAQCLATG 123
VL+H G W L + V DL G +E + L
Sbjct: 6 VLIHTICH-GAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFL 64
Query: 124 LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQ-----AMVVSGSILAMTDSINETNLNR 178
A +K +LVG S GG+ A+ Y + V+ + + +++
Sbjct: 65 EALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF 124
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI 238
++ K + L T + + + E+ ++ + L
Sbjct: 125 PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAK 184
Query: 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298
+ +W + D+IF E E ++ H + L +
Sbjct: 185 RPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK--PDKVYKVEGGDHKLQLTKTK 242
Query: 299 AYNRCLKQFLASLH 312
L++ + +
Sbjct: 243 EIAEILQEVADTYN 256
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 66.8 bits (161), Expect = 2e-13
Identities = 41/255 (16%), Positives = 83/255 (32%), Gaps = 29/255 (11%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQC- 119
+ V+L+HGF + L K Y+ + P G + P Q
Sbjct: 10 GERAVLLLHGFTG-NSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDV 68
Query: 120 --LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
L G +K + G S GG+ S K+ P + + + +++ E L
Sbjct: 69 MNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLE 128
Query: 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL 237
YKK S + F + L
Sbjct: 129 YA-----------------------REYKKREGKSEEQIEQEMEKFKQTPMKTLKALQEL 165
Query: 238 ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER- 296
I++ + ++ D++ N + A+ + ++ + + +++GH++ L++
Sbjct: 166 IADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQE 225
Query: 297 PCAYNRCLKQFLASL 311
+ + FL SL
Sbjct: 226 KDQLHEDIYAFLESL 240
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 66.9 bits (161), Expect = 2e-13
Identities = 43/259 (16%), Positives = 76/259 (29%), Gaps = 13/259 (5%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGS--ITDEADRSPTFQAQCL 120
VLVHG G +W L + V DL G +E + +
Sbjct: 3 KHFVLVHGACH-GGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLM 61
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
+ +K +LVG S GGM E YP + A V + + + + L +
Sbjct: 62 ELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYN 121
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLW-------FPSCLYKDFLEVMFANRKERAELL 233
+ +E L + T + L + + + + +
Sbjct: 122 ERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFM 181
Query: 234 EGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293
E L + + + +D+ E + +G IK A H+
Sbjct: 182 EDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG--VTEAIEIKGADHMAM 239
Query: 294 LERPCAYNRCLKQFLASLH 312
L P L + +
Sbjct: 240 LCEPQKLCASLLEIAHKYN 258
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 66.3 bits (161), Expect = 3e-13
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 11/109 (10%)
Query: 60 KPSKPVVVLVHGFAA----EGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPT 114
+ P+V L HG G+ W AL + VY+ ++ S
Sbjct: 5 QTKYPIV-LAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQ---- 59
Query: 115 FQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
Q + +A G K L+G S+GG VA + P+L+ + G+
Sbjct: 60 -LLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGA 107
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 65.0 bits (156), Expect = 1e-12
Identities = 46/260 (17%), Positives = 76/260 (29%), Gaps = 11/260 (4%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQ 118
VV HG+ W Q+ Y V D G S A
Sbjct: 18 PRDGLPVVFHHGWPL-SADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAA 76
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
+A L + V +G S GG + A V S + ++TN +
Sbjct: 77 DVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDG 136
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWF--------PSCLYKDFLEVMFANRKERA 230
L + E + + + V + F + +L+ M
Sbjct: 137 LPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHY 196
Query: 231 ELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290
E + ++ + V + G DDQ+ A +L A+ T + + H
Sbjct: 197 ECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLAN-ATLKSYEGLPH 255
Query: 291 LVHLERPCAYNRCLKQFLAS 310
+ P N L F+ S
Sbjct: 256 GMLSTHPEVLNPDLLAFVKS 275
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 65.2 bits (158), Expect = 1e-12
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 9/111 (8%)
Query: 59 KKPSKPVVVLVHGFAA-----EGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRS 112
PV+ LVHG A + W L VY+ +L F D +
Sbjct: 5 AATRYPVI-LVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSD--DGPNGR 61
Query: 113 PTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163
+ LA G K L+G S GG+ S VA + P LV ++ G+
Sbjct: 62 GEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 64.2 bits (154), Expect = 2e-12
Identities = 35/279 (12%), Positives = 71/279 (25%), Gaps = 32/279 (11%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGA--LTKKYSVYIPDLLFFGGSITDEADR---SPTF 115
P+ P ++LV G + W + V D G S T +
Sbjct: 20 PADPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGE 78
Query: 116 QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV--SGSILAMTDSINE 173
A L GVD+ +VG S G ++ +A + + + ++ + G + D+ E
Sbjct: 79 LAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIE 138
Query: 174 TNLNRLGVSSSSELLLPNSVKGLKALLSVAT----------------------YKKLWFP 211
+ + L + A + +
Sbjct: 139 RVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYA 198
Query: 212 SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNM 271
+ + A L ++ + ++ E D I ++
Sbjct: 199 RWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHL 258
Query: 272 KEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310
+ I GH + + S
Sbjct: 259 AGLI--PTARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 64.1 bits (154), Expect = 2e-12
Identities = 51/257 (19%), Positives = 76/257 (29%), Gaps = 11/257 (4%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
+ VVL+HGF G +W+ Q AL Y V D FG S A L
Sbjct: 22 TGQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADL 80
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
T L L + VLVGFS G + Y A V + L + N +
Sbjct: 81 NTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAA 140
Query: 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAE--------L 232
+ ++ A + L E N A
Sbjct: 141 PQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA 200
Query: 233 LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292
++ +P +L G D+ +E + + + ++ A H +
Sbjct: 201 APTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP-SAEYVEVEGAPHGL 259
Query: 293 HLERPCAYNRCLKQFLA 309
N L FLA
Sbjct: 260 LWTHAEEVNTALLAFLA 276
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 63.4 bits (152), Expect = 4e-12
Identities = 43/280 (15%), Positives = 84/280 (30%), Gaps = 22/280 (7%)
Query: 49 GEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE 108
G I K K ++ +HG + +V D G S +
Sbjct: 11 GIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPD 70
Query: 109 ADRSPTFQAQCLA--TGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166
+ A G +K L+G SYGG ++ A Y + ++ ++VSG + +
Sbjct: 71 QSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS 130
Query: 167 MTDSINETNLNRLGVSSSSELLL-----------PNSVKGLKALLSVATYKKLWFPSCLY 215
+ ++ E N + + + P + + + +P +
Sbjct: 131 VPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVL 190
Query: 216 KDFLEVMFANRKERAELLEGLLISNKD------PTVPNFPQRVHLLWGEDDQIFNVELAH 269
K N I+ + + GE D++ +A
Sbjct: 191 KSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVT-PNVAR 249
Query: 270 NMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
+ E++ + HL E YN+ L F+
Sbjct: 250 VIHEKIA--GSELHVFRDCSHLTMWEDREGYNKLLSDFIL 287
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 62.6 bits (150), Expect = 6e-12
Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 9/254 (3%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
S V+ HG+ W++Q+ L+ + Y D FG S A +
Sbjct: 18 SGKPVLFSHGWLL-DADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDI 76
Query: 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180
A + L + + LVGFS GG + + + A +V + +
Sbjct: 77 AQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVP 136
Query: 181 VSSSSELLLP------NSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLE 234
+ + + A ++ + + A+ K + +
Sbjct: 137 LDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVT 196
Query: 235 GLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294
++ P + ++ G+ DQI E + +L + K A H +
Sbjct: 197 AFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAEL-IKGAELKVYKDAPHGFAV 255
Query: 295 ERPCAYNRCLKQFL 308
N L FL
Sbjct: 256 THAQQLNEDLLAFL 269
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 62.2 bits (149), Expect = 8e-12
Identities = 44/260 (16%), Positives = 87/260 (33%), Gaps = 18/260 (6%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCL 120
VV +HG+ WQ Q+ A+ Y D G S A L
Sbjct: 18 QGRPVVFIHGWPL-NGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDL 76
Query: 121 ATGLAKLGVDKCVLVGFSYGG-MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179
L L + LV S GG ++ V +++ V+ +I + +++ N
Sbjct: 77 NDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMI---KSDKNPD 133
Query: 180 GVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLE---------VMFANRKERA 230
GV L N V ++ T + + + + M +
Sbjct: 134 GVPDEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGV 193
Query: 231 ELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290
++ ++ + F ++ G+DDQ+ ++ Q+ + + + + H
Sbjct: 194 RCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQI-IPNAELKVYEGSSH 252
Query: 291 LVHL--ERPCAYNRCLKQFL 308
+ + +NR L +FL
Sbjct: 253 GIAMVPGDKEKFNRDLLEFL 272
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 62.6 bits (150), Expect = 8e-12
Identities = 42/268 (15%), Positives = 80/268 (29%), Gaps = 23/268 (8%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
+ P ++L+HG+ W +G L + Y V +PDL FG S + + + A
Sbjct: 27 AGPTLLLLHGWPG-FWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAA 85
Query: 122 TGLAK----LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI----------LAM 167
A LG++K +VG + +V K Y + V + I L
Sbjct: 86 DDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGH 145
Query: 168 TDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRK 227
+ ++L ++ K + + +
Sbjct: 146 VHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPD 205
Query: 228 ERAELLEGLLISNK-------DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHV 280
+ + D V ++WG D + +
Sbjct: 206 NIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKY-YSNY 264
Query: 281 TFQGIKKAGHLVHLERPCAYNRCLKQFL 308
T + I+ GH + +E+P +K
Sbjct: 265 TMETIEDCGHFLMVEKPEIAIDRIKTAF 292
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 62.6 bits (151), Expect = 8e-12
Identities = 32/293 (10%), Positives = 75/293 (25%), Gaps = 45/293 (15%)
Query: 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW 80
H + + G ++ W P K +++ GFA
Sbjct: 4 TIAHVLRVNNGQELHVWETPPKENVPFK--------------NNTILIASGFARRMDHFA 49
Query: 81 QFQVGALTKKYSVYIPDLLFFGGS----ITDEADRSPTFQAQCLATGLAKLGVDKCVLVG 136
T + V+ D L G I + + + L G L+
Sbjct: 50 GLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIA 109
Query: 137 FSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGL 196
S V+++V + ++ + ++ + D++ +
Sbjct: 110 ASLSARVAYEVIS--DLELSFLITAVGVVNLRDTLEK---------------ALGFDYLS 152
Query: 197 KALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLW 256
+ + + F+ F + + + + + P +
Sbjct: 153 LPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVP--------LIAFT 204
Query: 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
+D E ++M + H + + H L R Q +
Sbjct: 205 ANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHD--LGENLVVLRNFYQSVT 255
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 59.2 bits (141), Expect = 1e-10
Identities = 40/267 (14%), Positives = 85/267 (31%), Gaps = 17/267 (6%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQC 119
++ V + +HG + + V PD FG S + TF+
Sbjct: 44 SDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHR 103
Query: 120 LATG--LAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSI------------L 165
+ +L + LV +GG + + P+ + +++ +
Sbjct: 104 NFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSA 163
Query: 166 AMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLS--VATYKKLWFPSCLYKDFLEVMF 223
+T + + + + S+L L +K L+ A+ FP Y+ +
Sbjct: 164 FVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFP 223
Query: 224 ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQ 283
+R + + ++ + + G D++ ++ + MK +
Sbjct: 224 KMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALIN-GCPEPL 282
Query: 284 GIKKAGHLVHLERPCAYNRCLKQFLAS 310
I AGH V LK F +
Sbjct: 283 EIADAGHFVQEFGEQVAREALKHFAET 309
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 58.7 bits (140), Expect = 2e-10
Identities = 45/284 (15%), Positives = 85/284 (29%), Gaps = 40/284 (14%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQC- 119
P VV++HG G + + KY + + D G S T
Sbjct: 32 PHGKPVVMLHGGPGGGC-NDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVA 90
Query: 120 -LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL------------- 165
+ LGVD+ + G S+G ++ A+ +P V +V+ G L
Sbjct: 91 DIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEG 150
Query: 166 ----------AMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLY 215
++I L + L + L A + + ++ +
Sbjct: 151 ASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVD 210
Query: 216 KDFLEVM--FANRKERAELLEGLLISNKDPTVPNFPQR---------VHLLWGEDDQIFN 264
+DF+ A + ++ V + R ++ G D +
Sbjct: 211 EDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCP 270
Query: 265 VELAHNMKEQLGADHVTFQGIKKAGHLV-HLERPCAYNRCLKQF 307
++ A ++ + Q +GH E A R F
Sbjct: 271 LQSAWDLHKAW--PKAQLQISPASGHSAFEPENVDALVRATDGF 312
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 56.4 bits (134), Expect = 1e-09
Identities = 31/266 (11%), Positives = 77/266 (28%), Gaps = 20/266 (7%)
Query: 59 KKPSKPVVVLVHGFAAEGIVTWQFQVGA--------LTKKYSVYIPDLLFFGGSITDEAD 110
++ + + L+HG G +TW+ L K YS Y+ D G S TD +
Sbjct: 54 QRAKRYPITLIHGCCLTG-MTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISA 112
Query: 111 RSPTFQAQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMT 168
+ + A+ L L + F +G + + + ++
Sbjct: 113 INAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDW 172
Query: 169 DSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKE 228
++ + ++ L + G L + + + + + + +
Sbjct: 173 LG----SMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPG 228
Query: 229 RAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGAD----HVTFQG 284
E + P + F + ++ + G + G
Sbjct: 229 ECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALG 288
Query: 285 IKKAGHLVHLERPC-AYNRCLKQFLA 309
+ H++ +R + ++
Sbjct: 289 VHGNSHMMMQDRNNLQVADLILDWIG 314
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 56.2 bits (134), Expect = 1e-09
Identities = 45/362 (12%), Positives = 87/362 (24%), Gaps = 85/362 (23%)
Query: 21 VQPHAVEIEPGTTMN-FWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVT 79
+ + V E G + +P G + PV L HG A
Sbjct: 27 AEEYEVVTEDGYILGIDRIPYGRKNSENIGRR------------PVAFLQHGLLASA-TN 73
Query: 80 WQFQVGALT-------KKYSVYIPDLLFFGG--------------SITDEADRSPTFQAQ 118
W + + Y V++ + + +
Sbjct: 74 WISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPA 133
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMV-VSGSILAMTDSINETNLN 177
+ L K G DK VG S G + F P L + + T ET +N
Sbjct: 134 TIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLIN 193
Query: 178 RLGVSSSSELLLPNSVKG------------------------------------------ 195
+L + S L K
Sbjct: 194 KLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNM 253
Query: 196 ------LKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFP 249
L + + + + S K F ++ + +
Sbjct: 254 SRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMH 313
Query: 250 QRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309
+ + G +D + + + +L + + + I HL + A + ++
Sbjct: 314 VPIAVWNGGNDLLADPHDVDLLLSKLP-NLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVS 372
Query: 310 SL 311
+
Sbjct: 373 MM 374
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 55.5 bits (133), Expect = 2e-09
Identities = 18/123 (14%), Positives = 39/123 (31%), Gaps = 10/123 (8%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK--YSVYIPDLLFFG-GSITDEADRSPTFQA 117
++LV G G ++ L+ + Y+ F +
Sbjct: 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYM----V 84
Query: 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
+ A G +K ++ +S GG+V+ +P++ + ++A T L
Sbjct: 85 NAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV---DRLMAFAPDYKGTVLA 141
Query: 178 RLG 180
Sbjct: 142 GPL 144
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 54.5 bits (129), Expect = 4e-09
Identities = 42/280 (15%), Positives = 85/280 (30%), Gaps = 40/280 (14%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTF--QAQ 118
P+ V +HG GI + + ++Y V + D G S + + T
Sbjct: 32 PNGKPAVFIHGGPGGGI-SPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVA 90
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
+ GV++ ++ G S+G ++ A+ +P V MV+ G ++ +
Sbjct: 91 DIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDG 150
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGL-- 236
+ S+ V + S + LE E + L
Sbjct: 151 ASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPS 210
Query: 237 ---------------------------LISNKDPTVPNFPQRVH----LLWGEDDQIFNV 265
+ + D + N P H ++ G D V
Sbjct: 211 RESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQV 270
Query: 266 ELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLK 305
+ A ++ + ++ AGH + P ++ +
Sbjct: 271 QNAWDLAKAW--PEAELHIVEGAGH--SYDEPGILHQLMI 306
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Score = 49.5 bits (117), Expect = 1e-07
Identities = 35/260 (13%), Positives = 65/260 (25%), Gaps = 44/260 (16%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQ--VGALTKKYSVYIPDLL-FFGGSITDEADRSPTFQA 117
+ V+V G AA G +F + ++ L + G+ T A
Sbjct: 58 EGRAVLVGCTGTAANGGP-HEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDT 116
Query: 118 ---QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174
L G VL+G S G +++ ++A A
Sbjct: 117 ALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAHGAPPA-------------- 162
Query: 175 NLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLE 234
+ + ++ L L+ LE M R +
Sbjct: 163 ---GIVLVDPYPPGHQEPIEVWSRQLGEG----------LFAGELEPMSD---ARLLAMG 206
Query: 235 GLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADH--VTFQGIKKAGHLV 292
P V L+ + E + + H G H
Sbjct: 207 RYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVPG----DHFT 262
Query: 293 HL-ERPCAYNRCLKQFLASL 311
+ + A + +L ++
Sbjct: 263 MMRDHAPAVAEAVLSWLDAI 282
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 45.9 bits (108), Expect = 2e-06
Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 7/108 (6%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQ--VGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQ 118
P + V+ G AA +F GAL V + + A
Sbjct: 40 PGEVTVICCAGTAAISGP-HEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSS-MAAVAAV 97
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNL---VQAMVVSGS 163
+ G V+ G S G ++++ +A + + +V+
Sbjct: 98 QADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDV 145
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 45.7 bits (107), Expect = 3e-06
Identities = 35/262 (13%), Positives = 69/262 (26%), Gaps = 44/262 (16%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQ----AQ 118
P V+++ G + ++Q + L + + D G + +
Sbjct: 131 HPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVV 190
Query: 119 CLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178
L T L + D ++G S GG + K A P L + G
Sbjct: 191 DLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGG---------------- 234
Query: 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLI 238
+ + L K+ + + L
Sbjct: 235 -----------------------FSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAA 271
Query: 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298
+ ++L G D++ + + E + A+H+ K H H
Sbjct: 272 LETRDVLSQIACPTYILHGVHDEV-PLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIR 330
Query: 299 AYNRCLKQFLASLHADEQFTPS 320
L A ++ P+
Sbjct: 331 PRLEMADWLYDVLVAGKKVAPT 352
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.7 bits (104), Expect = 4e-06
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLK 305
+ +++G+ D + H +K+ + +K AGH +L++P ++ L
Sbjct: 147 ASVKTPALIVYGDQDPMGQTSFEH-LKQLPNHRVLI---MKGAGHPCYLDKPEEWHTGLL 202
Query: 306 QFLASL 311
FL L
Sbjct: 203 DFLQGL 208
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 42.8 bits (100), Expect = 5e-06
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 14/109 (12%)
Query: 64 PVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATG 123
P V+LV A+ Y+ Y+ DL +G + + +P A +A
Sbjct: 22 PPVLLVAEEASRWPEALPE-------GYAFYLLDLPGYGRT--EGPRMAPEELAHFVAGF 72
Query: 124 LAKLGVDKCVLVGFSYGGMVSFKVAELYPNL-----VQAMVVSGSILAM 167
+ + ++ G + + L V+ V S L+
Sbjct: 73 AVMMNLGAPWVLLRGLGLALGPHLEALGLRALPAEGVEVAEVLSSKLSY 121
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 43.1 bits (100), Expect = 2e-05
Identities = 32/291 (10%), Positives = 76/291 (26%), Gaps = 41/291 (14%)
Query: 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-------YSVYIPDLLFFGGSITDEADRSP 113
+ L+HG+ V + + ++ + + +P L + S D+
Sbjct: 104 EDAVPIALLHGWP-GSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDF 162
Query: 114 TFQAQC--LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171
+ + LG ++ G ++ + + +A+ ++ +
Sbjct: 163 GLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEG 222
Query: 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERA- 230
+ GL + +T + + K
Sbjct: 223 PSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQW 282
Query: 231 --------ELLEGLLISNKDPTVPNFPQR------------VHLLWGEDDQI-------- 262
+LE + + + P + ++ I
Sbjct: 283 VDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSF 342
Query: 263 FNVELAHNMKE--QLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311
F +L + + V F+ + GH LERP L F+ +
Sbjct: 343 FPKDLCPVPRSWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQV 393
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 39.6 bits (91), Expect = 2e-04
Identities = 15/115 (13%), Positives = 33/115 (28%), Gaps = 16/115 (13%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSV-------------YIPDLLFFGGSIT 106
K S+ + L+HG + T + ++ + +
Sbjct: 20 KESRECLFLLHGSGVDE-TTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQ 78
Query: 107 DEADRSPTFQAQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMV 159
A + G+ D +G+S G + + L+P +V+
Sbjct: 79 KSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAA 133
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 39.1 bits (90), Expect = 2e-04
Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 5/104 (4%)
Query: 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLA 121
VV+VHG + L + +S + F + P ++ +
Sbjct: 2 HNPVVMVHGIGG-ASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGP-VLSRFVQ 59
Query: 122 TGLAKLGVDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGS 163
L + G K +V S GG + + N V +V G
Sbjct: 60 KVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGG 103
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 39.7 bits (91), Expect = 2e-04
Identities = 32/256 (12%), Positives = 66/256 (25%), Gaps = 42/256 (16%)
Query: 58 LKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQA 117
+ + + ++ G++ +Q L Y + D + + AD
Sbjct: 12 MNQDQEQIIFAFPPVLGYGLM-YQNLSSRL-PSYKLCAFDFIEEEDRLDRYADLI----- 64
Query: 118 QCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177
L G+S G ++F+ A+ + + + +
Sbjct: 65 ------QKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKK-------- 110
Query: 178 RLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL 237
S+L ++AL++V + + + A
Sbjct: 111 ----QGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAF----------YS 156
Query: 238 ISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGA-DHVTFQGIKKAGHLVHLER 296
+ + LL D LA + GA G H L+
Sbjct: 157 YYVNLISTGQVKADIDLLTSGADFDIPEWLASWEEATTGAYRMKRGFG----THAEMLQG 212
Query: 297 PCA--YNRCLKQFLAS 310
L +FL +
Sbjct: 213 ETLDRNAGILLEFLNT 228
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 38.9 bits (89), Expect = 4e-04
Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 14/114 (12%)
Query: 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG-------------GSIT 106
P+ VL+HG + + L + ++ P
Sbjct: 14 VAGAPLFVLLHGTGGDE-NQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDM 72
Query: 107 DEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
+ +R+ A + + +GFS G + V P L A V+
Sbjct: 73 VDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVL 126
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 38.0 bits (87), Expect = 0.001
Identities = 27/144 (18%), Positives = 43/144 (29%), Gaps = 13/144 (9%)
Query: 42 TIEKPKKGEKIIEKEALKKPSKPVVVLVHGF-AAEGIVTWQFQVGAL----TKKYSVYIP 96
+ P G I A V L+ F A + W A+ K SV P
Sbjct: 8 MVPSPSMGRDI--PVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAP 65
Query: 97 D---LLFFGGSITDEADRSPTFQAQCLATGLAKLGV---DKCVLVGFSYGGMVSFKVAEL 150
+ D + + TF + L LA VG + GG + +A
Sbjct: 66 AGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAF 125
Query: 151 YPNLVQAMVVSGSILAMTDSINET 174
+P+ L +++
Sbjct: 126 HPDRFGFAGSMSGFLYPSNTTTNG 149
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} Length = 186 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Score = 35.8 bits (81), Expect = 0.003
Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 11/101 (10%)
Query: 62 SKPVVVLVHGFAAEGIVTWQFQVG-ALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQC 119
+K V ++HG+ A W + L I ++
Sbjct: 1 TKQVY-IIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR-------LEDWLDT 52
Query: 120 LATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVV 160
L+ L + LV S G + E +
Sbjct: 53 LSLYQHTLH-ENTYLVAHSLGCPAILRFLEHLQLRAALGGI 92
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 320 | |||
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 100.0 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 100.0 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.98 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.98 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.97 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.96 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.96 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.95 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.94 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.93 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.93 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.93 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.92 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.92 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.92 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.92 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.92 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.91 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.91 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.89 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.88 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.88 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.87 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.87 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.86 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.86 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.85 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.85 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.85 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.85 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.84 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.82 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.8 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.76 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.73 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.73 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.72 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.71 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.68 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.65 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.63 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.62 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.59 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.59 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.56 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.55 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.46 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.35 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.34 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.3 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.28 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 99.24 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 99.22 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.21 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.21 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.2 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.13 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.12 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 99.12 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.95 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.94 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.88 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.75 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.67 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.64 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.95 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.93 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.91 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.9 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 97.84 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 97.72 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 97.71 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.66 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 97.44 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 97.24 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.59 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.57 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.56 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.45 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.43 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 95.75 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 95.56 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 95.24 |
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=2.1e-39 Score=254.60 Aligned_cols=256 Identities=20% Similarity=0.250 Sum_probs=180.5
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHHHHHHHhhccceEEecCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
..+++++ ||.+|+|...| ++|+|||+||++++.. ..|..+++.|+++|+|+++|+|
T Consensus 3 ~~~~~~~-dg~~l~y~~~G---------------------~g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~ 60 (268)
T d1j1ia_ 3 VERFVNA-GGVETRYLEAG---------------------KGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDML 60 (268)
T ss_dssp EEEEEEE-TTEEEEEEEEC---------------------CSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCT
T ss_pred cCeEEEE-CCEEEEEEEEc---------------------CCCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEccc
Confidence 4578888 79999999877 4678999999987654 2477788999888999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhCCC-cEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLGVD-KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNR 178 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 178 (320)
|||.|+.+....+.+.+++++.++++.++.+ +++++|||+||.+++.+|.++|++|+++|++++.......... ...
T Consensus 61 G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~--~~~ 138 (268)
T d1j1ia_ 61 GFGKTAKPDIEYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHED--LRP 138 (268)
T ss_dssp TSTTSCCCSSCCCHHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC---------
T ss_pred ccccccCCccccccccccccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccchh--hhh
Confidence 9999998888899999999999999999874 6999999999999999999999999999999986543221110 000
Q ss_pred ccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcC--hhhHHH----HhhhhhccCCCCCCCCCCCcE
Q 020916 179 LGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFAN--RKERAE----LLEGLLISNKDPTVPNFPQRV 252 (320)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~P~ 252 (320)
. . ...................................... ...... .............+.++++|+
T Consensus 139 ~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 211 (268)
T d1j1ia_ 139 I-----I--NYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPT 211 (268)
T ss_dssp ----------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCE
T ss_pred h-----h--hhhhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCE
Confidence 0 0 00011111112222111111111222222211111100 000001 111111111123467889999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++|+|++|.++|++..+.+.+.++ ++++++++++||++++|+|+++++.|.+||.+
T Consensus 212 l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 212 LVVQGKDDKVVPVETAYKFLDLID--DSWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHCT--TEEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCC--CCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 999999999999999999999998 99999999999999999999999999999975
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=4.4e-40 Score=261.54 Aligned_cols=267 Identities=17% Similarity=0.205 Sum_probs=186.0
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
.++.+++++ ||.+|+|...|+ +++|+|||+||++++.. .|..+++.|++.|+|+++|+|
T Consensus 6 p~~~~~i~~-~g~~i~y~~~G~-------------------~~~p~lvllHG~~~~~~-~~~~~~~~L~~~~~vi~~d~~ 64 (291)
T d1bn7a_ 6 PFDPHYVEV-LGERMHYVDVGP-------------------RDGTPVLFLHGNPTSSY-LWRNIIPHVAPSHRCIAPDLI 64 (291)
T ss_dssp CCCCEEEEE-TTEEEEEEEESC-------------------SSSSCEEEECCTTCCGG-GGTTTHHHHTTTSCEEEECCT
T ss_pred CCCCeEEEE-CCEEEEEEEeCC-------------------CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEEeCC
Confidence 467889999 799999998886 46789999999999999 999999999888999999999
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccc
Q 020916 100 FFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRL 179 (320)
Q Consensus 100 G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 179 (320)
|||.|+.+...++.+++++++.+++++++.++++++||||||.+++.++.++|+++++++++++................
T Consensus 65 G~G~S~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~ 144 (291)
T d1bn7a_ 65 GMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARE 144 (291)
T ss_dssp TSTTSCCCSCCCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHH
T ss_pred CCccccccccccchhHHHHHHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhh
Confidence 99999988888999999999999999999999999999999999999999999999999999876543322111110000
Q ss_pred cc-----cccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcCh--hhHHHHhhhhhccC-----------C
Q 020916 180 GV-----SSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANR--KERAELLEGLLISN-----------K 241 (320)
Q Consensus 180 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----------~ 241 (320)
.. ...................... ............+........ .............. .
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (291)
T d1bn7a_ 145 TFQAFRTADVGRELIIDQNAFIEGVLPKC--VVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAY 222 (291)
T ss_dssp HHHHHTSTTHHHHHHTTSCHHHHTHHHHT--CSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHH
T ss_pred HHHHHhhhhhHHHhhhhhhhhHHhhhhhh--ccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhh
Confidence 00 0000000000000000000000 000111111111111111000 00000000000000 0
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
...+.++++|+++|+|++|.++|++..+.+.+.++ ++++++++++||+++.|+|+++++.|.+||+.+
T Consensus 223 ~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 223 MNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLP--NCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp HHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHST--TEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred hhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCC--CCEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 01235678999999999999999999999999998 999999999999999999999999999999876
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=9e-39 Score=251.38 Aligned_cols=252 Identities=20% Similarity=0.338 Sum_probs=179.4
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHHHHHHHhhccceEEecCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
++|.+ ||.+++|...| ++|+|||+||++++.. ..|..+++.|++.|+|+++|+|||
T Consensus 6 ~~i~~-~G~~~~Y~~~G---------------------~G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~ 63 (271)
T d1uk8a_ 6 KSILA-AGVLTNYHDVG---------------------EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGF 63 (271)
T ss_dssp EEEEE-TTEEEEEEEEC---------------------CSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTS
T ss_pred CEEEE-CCEEEEEEEEe---------------------eCCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 45666 89999999888 4689999999987765 135567888887899999999999
Q ss_pred CCCCCCC-CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccccccc
Q 020916 102 GGSITDE-ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG 180 (320)
Q Consensus 102 G~s~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 180 (320)
|.|..+. ...+.+..++++..++++++.++++|+||||||.+++.+|.++|++++++|++++.......... .....
T Consensus 64 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~-~~~~~- 141 (271)
T d1uk8a_ 64 GFTDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEG-LNAVW- 141 (271)
T ss_dssp TTSCCCTTCCCCHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHH-HHHHH-
T ss_pred CCccccccccccccccchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhh-hhhhh-
Confidence 9998765 44678889999999999999999999999999999999999999999999999887543221110 00000
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcCh-hh---------HHHHhhhhhccCCCCCCCCCCC
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANR-KE---------RAELLEGLLISNKDPTVPNFPQ 250 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~ 250 (320)
....................................... .. ....... .......+.++++
T Consensus 142 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~ 212 (271)
T d1uk8a_ 142 -------GYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDA--LASSDEDIKTLPN 212 (271)
T ss_dssp -------TCCSCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHH--HCCCHHHHTTCCS
T ss_pred -------hccchhHHHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhh--ccccHHHHHhhcc
Confidence 011112222222222222222222222222221111100 00 0000000 1112234678899
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
|+++|+|++|.++|.+..+.+.+.++ ++++++++++||+++.++|+++++.|.+||++
T Consensus 213 P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 213 ETLIIHGREDQVVPLSSSLRLGELID--RAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHCT--TEEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred ceeEEecCCCCCcCHHHHHHHHHhCC--CCEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 99999999999999999999999998 89999999999999999999999999999986
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=1.4e-38 Score=253.69 Aligned_cols=264 Identities=15% Similarity=0.055 Sum_probs=178.6
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccH-HHHHHHhhcc-ceEEecCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTW-QFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~vi~~d~~G 100 (320)
++.+++ +|.+|+|...|+ +++|+|||+||++++.. .| ..+++.|.+. |+|+++|+||
T Consensus 2 e~~~~~-g~~~i~y~~~G~-------------------~~~p~vvl~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G 60 (297)
T d1q0ra_ 2 ERIVPS-GDVELWSDDFGD-------------------PADPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRD 60 (297)
T ss_dssp EEEEEE-TTEEEEEEEESC-------------------TTSCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTT
T ss_pred CeEEEE-CCEEEEEEEecC-------------------CCCCEEEEECCCCcChh-HHHHHHHHHHHhCCCEEEEEeCCC
Confidence 466777 689999998886 47899999999999988 77 4577777766 9999999999
Q ss_pred CCCCCCCC---CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccc
Q 020916 101 FGGSITDE---ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLN 177 (320)
Q Consensus 101 ~G~s~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 177 (320)
||.|+... ..++++++++|+..++++++.++++++||||||.+++.+|..+|++|+++|++++..............
T Consensus 61 ~G~S~~~~~~~~~~~~~~~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~ 140 (297)
T d1q0ra_ 61 TGRSTTRDFAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERV 140 (297)
T ss_dssp STTSCCCCTTTSCCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHH
T ss_pred CcccccccccccccccchhhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHH
Confidence 99997654 336899999999999999999999999999999999999999999999999998765432211110000
Q ss_pred cccccccccccCcCcHHH-----------------HHHHHhHh-hhc--cccCCchhHHHHHHHHhcCh-h----hHHHH
Q 020916 178 RLGVSSSSELLLPNSVKG-----------------LKALLSVA-TYK--KLWFPSCLYKDFLEVMFANR-K----ERAEL 232 (320)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~-~----~~~~~ 232 (320)
....... .......... ........ ... ...........+........ . .....
T Consensus 141 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (297)
T d1q0ra_ 141 MRGEPTL-DGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHY 219 (297)
T ss_dssp HHTCCCS-SCSCCCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGG
T ss_pred hhhhhhh-hhhhhhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhh
Confidence 0000000 0000000000 00000000 000 00111111111111111000 0 00000
Q ss_pred hhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 233 LEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
.......+....+.++++|+++|+|++|.+++++..+.+.+.++ ++++++++|+||+++.++|+++++.|.+||++
T Consensus 220 ~~~~~~~~~~~~l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p--~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 220 SLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP--TARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp GCCCCCGGGGGGGGGCCSCEEEEEETTCSSSCTTHHHHHHHTST--TEEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred hhhhccccchhhhhccCCceEEEEeCCCCCCCHHHHHHHHHhCC--CCEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 00001111224567889999999999999999999999999998 99999999999999999999999999999986
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=2.6e-39 Score=254.90 Aligned_cols=264 Identities=19% Similarity=0.142 Sum_probs=181.7
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
+|++.||.+|+|...|+ +++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.
T Consensus 2 ~i~~~dG~~l~y~~~G~-------------------~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~ 61 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGP-------------------RDGLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGR 61 (275)
T ss_dssp EEECTTSCEEEEEEESC-------------------TTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred EEEecCCCEEEEEEecC-------------------CCCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccc
Confidence 68899999999999886 46789999999999999 999999998766 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeCh-hHHHHHHHHHhCccccccEEEecccccccccccccc--ccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSY-GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN--LNRLG 180 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~-Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~ 180 (320)
|..+...++.+++++|+.+++++++.++++++|||+ ||.+++.+|.++|++|+++|++++............ .....
T Consensus 62 s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 141 (275)
T d1a88a_ 62 SDQPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEV 141 (275)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhh
Confidence 998888899999999999999999999999999997 666777788999999999999987653222111000 00000
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhccc----cCCchhHHHHH-HHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKKL----WFPSCLYKDFL-EVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
............................ .........+. ................+...+....+.++++|+++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i 221 (275)
T d1a88a_ 142 FDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVA 221 (275)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEE
T ss_pred hhhhhhhhhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhcccccee
Confidence 0000000000000111111111111100 01111111111 111122223333333333333334566789999999
Q ss_pred ecCCCCCCCHHH-HHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 256 WGEDDQIFNVEL-AHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 256 ~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|++|.++|.+. .+.+.+.++ ++++++++++||++++|+|+++++.|.+||+.
T Consensus 222 ~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 222 HGTDDQVVPYADAAPKSAELLA--NATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp EETTCSSSCSTTTHHHHHHHST--TEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred ecCCCCCcCHHHHHHHHHHhCC--CCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 999999998754 566677777 89999999999999999999999999999973
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=8.7e-39 Score=252.91 Aligned_cols=259 Identities=21% Similarity=0.314 Sum_probs=177.1
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHHHHHHHhhccceEEecCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
+++.. ++.++||...|+ +++|+|||+||++++.. ..|..+++.|+++|+|+++|+|||
T Consensus 7 ~~~~~-~~~~~h~~~~G~-------------------~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~ 66 (281)
T d1c4xa_ 7 KRFPS-GTLASHALVAGD-------------------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGF 66 (281)
T ss_dssp EEECC-TTSCEEEEEESC-------------------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTS
T ss_pred EEEcc-CCEEEEEEEEec-------------------CCCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34444 568999999886 57899999999987654 147788999988899999999999
Q ss_pred CCCCCCCCC-----CChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 102 GGSITDEAD-----RSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 102 G~s~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
|.|+..... .+.++.++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++.............
T Consensus 67 G~S~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~ 146 (281)
T d1c4xa_ 67 GQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELA 146 (281)
T ss_dssp TTSCCCSSCCSSHHHHHHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHH
T ss_pred ccccccccccccchhhHHHhhhhccccccccccccceeccccccccccccccccccccccceEEeccccCccccchhHHH
Confidence 999876532 235567889999999999999999999999999999999999999999999986543222211111
Q ss_pred ccccccccccccCcCcHHHHHHHHhHhhhccccCCc--hhHHHHHHHHhcC--hhhHHHHhhhhhc-----cCCCCCCCC
Q 020916 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS--CLYKDFLEVMFAN--RKERAELLEGLLI-----SNKDPTVPN 247 (320)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~ 247 (320)
... ..............+..........+. ............. ..........+.. ......+.+
T Consensus 147 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 220 (281)
T d1c4xa_ 147 RLL------AFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGR 220 (281)
T ss_dssp HHH------TGGGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTT
T ss_pred HHH------HhhhhcccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhh
Confidence 100 011111222222222222222211111 1111111111000 0000011111100 111134577
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+++|+|+|+|++|.++|++..+.+.+.++ ++++++++++||++++|+|+++++.|.+||+.
T Consensus 221 i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 221 LPHDVLVFHGRQDRIVPLDTSLYLTKHLK--HAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp CCSCEEEEEETTCSSSCTHHHHHHHHHCS--SEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred hccceEEEEeCCCCCcCHHHHHHHHHHCC--CCEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 89999999999999999999999999998 99999999999999999999999999999973
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-39 Score=262.89 Aligned_cols=271 Identities=18% Similarity=0.247 Sum_probs=186.7
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPD 97 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d 97 (320)
.++...+|+++||.+|+|...| ++|+|||+||+++++. .|..+++.|.+. |+|+++|
T Consensus 9 ~~~~~~~v~~~~g~~i~y~~~G---------------------~gp~vlllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D 66 (322)
T d1zd3a2 9 SDMSHGYVTVKPRVRLHFVELG---------------------SGPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMD 66 (322)
T ss_dssp GGSEEEEEEEETTEEEEEEEEC---------------------CSSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEEE
T ss_pred CCCceeEEEECCCCEEEEEEEc---------------------CCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEec
Confidence 3677889999999999999877 4689999999999999 999999999877 9999999
Q ss_pred CCCCCCCCCCCC--CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccc
Q 020916 98 LLFFGGSITDEA--DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETN 175 (320)
Q Consensus 98 ~~G~G~s~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 175 (320)
+||||.|..+.. .++.+++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|+++++...........
T Consensus 67 ~~G~G~S~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 146 (322)
T d1zd3a2 67 MKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPL 146 (322)
T ss_dssp CTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHH
T ss_pred cccccccccccccccccccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchh
Confidence 999999987653 368899999999999999999999999999999999999999999999999987653322111100
Q ss_pred ccccccccc--ccc-cCcCc-----HHHHHHHHhHhhhc---------------------------cccCCchhHHHHHH
Q 020916 176 LNRLGVSSS--SEL-LLPNS-----VKGLKALLSVATYK---------------------------KLWFPSCLYKDFLE 220 (320)
Q Consensus 176 ~~~~~~~~~--~~~-~~~~~-----~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~ 220 (320)
......... ... ..+.. .....+.+...... .....+.....+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (322)
T d1zd3a2 147 ESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQ 226 (322)
T ss_dssp HHHHTCGGGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHH
T ss_pred hhhhccchhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHH
Confidence 000000000 000 00000 00000111000000 00011111122222
Q ss_pred HHhc-ChhhHHHHhh---hhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCC
Q 020916 221 VMFA-NRKERAELLE---GLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLER 296 (320)
Q Consensus 221 ~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 296 (320)
.... ........+. ............++++|+++|+|++|.+++++..+.+.+.++ +.++++++++||++++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~ 304 (322)
T d1zd3a2 227 QFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP--HLKRGHIEDCGHWTQMDK 304 (322)
T ss_dssp HHHHHTTHHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT--TCEEEEETTCCSCHHHHS
T ss_pred HHhhcccccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCEEEEECCCCCchHHhC
Confidence 1110 0000000000 001112234567889999999999999999999888888888 899999999999999999
Q ss_pred hHHHHHHHHHHHHhhhh
Q 020916 297 PCAYNRCLKQFLASLHA 313 (320)
Q Consensus 297 ~~~~~~~i~~fl~~~~~ 313 (320)
|+++++.|.+||++..+
T Consensus 305 p~~v~~~i~~FL~~~~~ 321 (322)
T d1zd3a2 305 PTEVNQILIKWLDSDAR 321 (322)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhcCC
Confidence 99999999999998654
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=2.6e-38 Score=251.46 Aligned_cols=266 Identities=17% Similarity=0.239 Sum_probs=181.9
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDL 98 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~ 98 (320)
..++..++++ +|.+|+|...| ++|+|||+||+++++. .|..+++.|+++|+|+++|+
T Consensus 6 ~~~~~~~~~~-~~~~l~y~~~G---------------------~gp~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~ 62 (293)
T d1ehya_ 6 EDFKHYEVQL-PDVKIHYVREG---------------------AGPTLLLLHGWPGFWW-EWSKVIGPLAEHYDVIVPDL 62 (293)
T ss_dssp GGSCEEEEEC-SSCEEEEEEEE---------------------CSSEEEEECCSSCCGG-GGHHHHHHHHTTSEEEEECC
T ss_pred CCCcceEEEE-CCEEEEEEEEC---------------------CCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEecC
Confidence 3467788899 68999998877 5789999999999999 99999999988899999999
Q ss_pred CCCCCCCCCCC----CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccc
Q 020916 99 LFFGGSITDEA----DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINET 174 (320)
Q Consensus 99 ~G~G~s~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 174 (320)
||||.|..... ..+.+++++++.+++++++.++++++||||||.+|+.+|.++|+++.++|++++...........
T Consensus 63 ~G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 142 (293)
T d1ehya_ 63 RGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFG 142 (293)
T ss_dssp TTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC------
T ss_pred CcccCCccccccccccccchhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhh
Confidence 99999986543 25778899999999999999999999999999999999999999999999999865322111100
Q ss_pred cc-------ccccccccccccCcCcHHHH----HHHHhHhhhccccCCchhHHHHHHHHhcChhhH--HHHhhhhhccCC
Q 020916 175 NL-------NRLGVSSSSELLLPNSVKGL----KALLSVATYKKLWFPSCLYKDFLEVMFANRKER--AELLEGLLISNK 241 (320)
Q Consensus 175 ~~-------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 241 (320)
.. .................... ...+.................+........... ...+........
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (293)
T d1ehya_ 143 LGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDA 222 (293)
T ss_dssp -----CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSC
T ss_pred hhhhhhhhhhhhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccch
Confidence 00 00000000000001111111 122222222223334444444444433221111 111111111111
Q ss_pred ----CCCCCCCCCcEEEEecCCCCCCCHHHHHH-HHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 242 ----DPTVPNFPQRVHLLWGEDDQIFNVELAHN-MKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 242 ----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
......+++|+++|+|++|.+++.+...+ +.+..+ ++++++++++||++++|+|+++++.|.+|++
T Consensus 223 ~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 223 ALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYS--NYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp CCCCTGGGSCBCSCEEEEEECCSSCCTTHHHHHHHHHHBS--SEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred hhhhhhhhhccCCceEEEEeCCCCCcCHHHHHHHHHHhCC--CCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 12234578999999999999999776554 555666 9999999999999999999999999999973
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.9e-38 Score=251.19 Aligned_cols=254 Identities=17% Similarity=0.255 Sum_probs=178.8
Q ss_pred CceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHH----HHhhccceEEecCCCCCCCCCC
Q 020916 31 GTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQV----GALTKKYSVYIPDLLFFGGSIT 106 (320)
Q Consensus 31 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~----~~l~~~~~vi~~d~~G~G~s~~ 106 (320)
+.+|+|...| ++|+|||+||++.++. .|..+. ..+.+.|+|+++|+||||.|..
T Consensus 19 ~~~i~y~~~G---------------------~G~~ivllHG~~~~~~-~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~ 76 (283)
T d2rhwa1 19 DFNIHYNEAG---------------------NGETVIMLHGGGPGAG-GWSNYYRNVGPFVDAGYRVILKDSPGFNKSDA 76 (283)
T ss_dssp EEEEEEEEEC---------------------CSSEEEEECCCSTTCC-HHHHHTTTHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred CEEEEEEEEc---------------------CCCeEEEECCCCCChh-HHHHHHHHHHHHHHCCCEEEEEeCCCCccccc
Confidence 4678888766 5689999999999988 887654 3344559999999999999987
Q ss_pred CCC-CCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccc
Q 020916 107 DEA-DRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSS 185 (320)
Q Consensus 107 ~~~-~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
+.. .++...+++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++....+.......... .....
T Consensus 77 ~~~~~~~~~~~~~~i~~li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~--~~~~~ 154 (283)
T d2rhwa1 77 VVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEG--IKLLF 154 (283)
T ss_dssp CCCSSCHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHH--HHHHH
T ss_pred ccccccccchhhhhcccccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHH--HHHHH
Confidence 654 356667789999999999999999999999999999999999999999999997654322211110000 00000
Q ss_pred cccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhh-----hhccCCCCCCCCCCCcEEEEecCCC
Q 020916 186 ELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEG-----LLISNKDPTVPNFPQRVHLLWGEDD 260 (320)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~l~i~g~~D 260 (320)
..........................++...................... ....+....+.++++|+++|+|++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 234 (283)
T d2rhwa1 155 KLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDD 234 (283)
T ss_dssp HHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTC
T ss_pred HHhhhhhhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCC
Confidence 11111122222233333333333333444333333333222222221111 1222334567788999999999999
Q ss_pred CCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 261 QIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
.+++++..+.+.+.++ ++++++++++||+++.|+|+++++.|.+||++
T Consensus 235 ~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 235 RFVPLDHGLKLLWNID--DARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp SSSCTHHHHHHHHHSS--SEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHhCC--CCEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 9999999999999998 99999999999999999999999999999975
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=6.4e-39 Score=252.57 Aligned_cols=261 Identities=15% Similarity=0.135 Sum_probs=178.1
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
+|++.||.+|+|...| ++|+|||+||+++++. .|..+++.|.+. |+|+++|+||||.
T Consensus 2 ~~~t~dG~~l~y~~~G---------------------~g~~ivlvHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~ 59 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDWG---------------------QGRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGH 59 (274)
T ss_dssp EEECTTSCEEEEEEEC---------------------SSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred eEECcCCCEEEEEEEC---------------------CCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCcc
Confidence 5788899999998877 4688999999999999 999999998766 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-CccccccEEEeccccccccccccccccccc--
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSINETNLNRLG-- 180 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-- 180 (320)
|+.+....+..++++|+.+++++++.++++++|||+||.+++.++++ .|++|++++++++.................
T Consensus 60 S~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (274)
T d1a8qa_ 60 STPVWDGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEV 139 (274)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHH
T ss_pred cccccccccchhhHHHHHHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHH
Confidence 99888889999999999999999999999999999999999887654 588999999999765432221111000000
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhcccc----CCchhHHHHHHHHh-cChhhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKKLW----FPSCLYKDFLEVMF-ANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
...................... ...... ........+..... ............+...+....+.++++|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii 218 (274)
T d1a8qa_ 140 FDALKNGVLTERSQFWKDTAEG-FFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVV 218 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEE
T ss_pred HHHHHhhhhhhhHHHhhhhhhh-hhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeee
Confidence 0000000000000001111111 111111 11111111111111 12222222223333333334567899999999
Q ss_pred ecCCCCCCCHHH-HHHHHHHhCCCCeEEEEecCCCccccc--CChHHHHHHHHHHHHh
Q 020916 256 WGEDDQIFNVEL-AHNMKEQLGADHVTFQGIKKAGHLVHL--ERPCAYNRCLKQFLAS 310 (320)
Q Consensus 256 ~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~ 310 (320)
+|++|.+++.+. .+.+.+.++ ++++++++++||++++ ++|+++++.|.+||++
T Consensus 219 ~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 219 HGDDDQVVPIDATGRKSAQIIP--NAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp EETTCSSSCGGGTHHHHHHHST--TCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred ccCCCCCcCHHHHHHHHHHhCC--CCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 999999999865 466777777 8999999999999876 5689999999999974
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.8e-37 Score=244.61 Aligned_cols=246 Identities=19% Similarity=0.176 Sum_probs=164.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
++|+|||+||++++.. .|..+++.|.++ |+|+++|+||||.|+.....++++.+++|+.+++++++.++++++|||||
T Consensus 22 ~G~~ivllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G 100 (277)
T d1brta_ 22 TGQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLDLQDAVLVGFSTG 100 (277)
T ss_dssp SSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHTCCSEEEEEEGGG
T ss_pred cCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhccCcccccccccccc
Confidence 5789999999999999 999999988766 99999999999999987778899999999999999999999999999999
Q ss_pred H-HHHHHHHHhCccccccEEEecccccccccccccccccccc---cccccccCcCcHHHHHHHHhHhhhcc----ccCCc
Q 020916 141 G-MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV---SSSSELLLPNSVKGLKALLSVATYKK----LWFPS 212 (320)
Q Consensus 141 g-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 212 (320)
| .++..++..+|++|+++|++++.................. .......................... .....
T Consensus 101 ~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (277)
T d1brta_ 101 TGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISE 180 (277)
T ss_dssp HHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCH
T ss_pred hhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhccccccccchhhhhhhhH
Confidence 6 5566678888999999999987654322211111000000 00000000000111111111111100 11111
Q ss_pred hhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhCCCCeEEEEecCCCcc
Q 020916 213 CLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
...........................+....++++++|+++|+|++|.+++.+. .+.+.+.++ ++++++++|+||+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~ 258 (277)
T d1brta_ 181 EAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP--SAEYVEVEGAPHG 258 (277)
T ss_dssp HHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCT--TSEEEEETTCCTT
T ss_pred HHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHhCC--CCEEEEECCCCCc
Confidence 1111111111111111111111111223446678899999999999999998875 466777777 8999999999999
Q ss_pred cccCChHHHHHHHHHHHHh
Q 020916 292 VHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~~ 310 (320)
++.|+|+++++.|.+||++
T Consensus 259 ~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 259 LLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp HHHHTHHHHHHHHHHHHHC
T ss_pred hHHhCHHHHHHHHHHHHCc
Confidence 9999999999999999974
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=6e-38 Score=248.72 Aligned_cols=267 Identities=16% Similarity=0.233 Sum_probs=177.1
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
...++++ ||.+|+|...|.+ .++|+|||+||+++++. .|...+..+.+. |+|+++|+||
T Consensus 3 ~~~~~~~-~g~~i~y~~~g~~------------------~~~~~iv~lHG~~g~~~-~~~~~~~~~~~~~~~vi~~D~~G 62 (290)
T d1mtza_ 3 IENYAKV-NGIYIYYKLCKAP------------------EEKAKLMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQFG 62 (290)
T ss_dssp EEEEEEE-TTEEEEEEEECCS------------------SCSEEEEEECCTTTCCS-GGGGGGGGGGGGTEEEEEECCTT
T ss_pred ccCeEEE-CCEEEEEEEcCCC------------------CCCCeEEEECCCCCchH-HHHHHHHHHHHCCCEEEEEeCCC
Confidence 3568888 7999999888852 35689999999988887 777766666665 9999999999
Q ss_pred CCCCCCCC-CCCChhHHHHHHHHHHHHh-CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc--ccc
Q 020916 101 FGGSITDE-ADRSPTFQAQCLATGLAKL-GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE--TNL 176 (320)
Q Consensus 101 ~G~s~~~~-~~~~~~~~~~~l~~~l~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~ 176 (320)
||.|+.+. ..++.+.+++|+.++++++ +.++++++||||||.+++.+|.++|++|+++|++++.......... ...
T Consensus 63 ~G~S~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 142 (290)
T d1mtza_ 63 CGRSEEPDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLI 142 (290)
T ss_dssp STTSCCCCGGGCSHHHHHHHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHH
T ss_pred CccccccccccccccchhhhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhh
Confidence 99998654 4578999999999999997 6889999999999999999999999999999999876543221100 000
Q ss_pred cccc------cccc--ccccC-cCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHH------HhhhhhccCC
Q 020916 177 NRLG------VSSS--SELLL-PNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAE------LLEGLLISNK 241 (320)
Q Consensus 177 ~~~~------~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 241 (320)
.... .... ..... +.....................+................... ........+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (290)
T d1mtza_ 143 DELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDI 222 (290)
T ss_dssp HTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBC
T ss_pred hhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccH
Confidence 0000 0000 00000 000011111111111111222222222111111111100000 0011111223
Q ss_pred CCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 242 DPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 242 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
...+..+++|+++|+|++|.++| +..+.+.+.++ ++++++++++||++++|+|+++++.|.+||.+.
T Consensus 223 ~~~~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 223 TDKISAIKIPTLITVGEYDEVTP-NVARVIHEKIA--GSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp TTTGGGCCSCEEEEEETTCSSCH-HHHHHHHHHST--TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred HHHhhcccceEEEEEeCCCCCCH-HHHHHHHHHCC--CCEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 34566789999999999998764 67888999998 899999999999999999999999999999874
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5e-38 Score=247.24 Aligned_cols=263 Identities=17% Similarity=0.122 Sum_probs=177.7
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
++.+.||.+|+|...| ++|+|||+||++++.. .|..+++.|.++ |+|+++|+||||.
T Consensus 2 ~f~~~dG~~i~y~~~G---------------------~g~pvvllHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~ 59 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDWG---------------------SGQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGR 59 (273)
T ss_dssp EEECTTSCEEEEEEES---------------------CSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred EEEeeCCcEEEEEEEC---------------------CCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEechhcCc
Confidence 4566799999998877 4688999999999999 999999999766 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHH-HHHhCccccccEEEecccccccccccccccccc--c
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFK-VAELYPNLVQAMVVSGSILAMTDSINETNLNRL--G 180 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~-~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~ 180 (320)
|+.+...++.+.+++++.+++++++.++.+++|||+||.++.. ++..+|++|.+++++++.+.............. .
T Consensus 60 S~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 139 (273)
T d1a8sa_ 60 SSQPWSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEV 139 (273)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHH
T ss_pred cccccccccccchHHHHHHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhh
Confidence 9988888999999999999999999999999999998865555 556679999999999876543221111000000 0
Q ss_pred ccccccccCcCcHHHHHHHHhHhhhcccc----CCchhHHHHHHH-HhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATYKKLW----FPSCLYKDFLEV-MFANRKERAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
............................. ......+.+... ..............+...+....+.++++|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii 219 (273)
T d1a8sa_ 140 FDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVV 219 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEE
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEE
Confidence 00000000000000011111111111000 111111222111 1122233333333333344445567889999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+|++|.++|.+..+.+.+.+. +++++++++++||++++++|+++++.|.+||+.
T Consensus 220 ~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~G 273 (273)
T d1a8sa_ 220 HGDADQVVPIEASGIASAALV-KGSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp EETTCSSSCSTTTHHHHHHHS-TTCEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred ecCCCCCCCHHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHcCC
Confidence 999999999887777665553 389999999999999999999999999999973
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5.1e-37 Score=241.03 Aligned_cols=261 Identities=19% Similarity=0.194 Sum_probs=176.8
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGG 103 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~ 103 (320)
+++. ||.+|+|...| ++|+|||+||++++.. .|..+++.|.++ |+|+++|+||||.
T Consensus 3 f~~~-dG~~l~y~~~G---------------------~g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~ 59 (271)
T d1va4a_ 3 FVAK-DGTQIYFKDWG---------------------SGKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGR 59 (271)
T ss_dssp EECT-TSCEEEEEEES---------------------SSSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTT
T ss_pred EEeE-CCeEEEEEEEc---------------------CCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccc
Confidence 4555 89999998877 4678999999999999 999999999876 9999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHH-HHHHhCccccccEEEecccccccccccccc--ccccc
Q 020916 104 SITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSF-KVAELYPNLVQAMVVSGSILAMTDSINETN--LNRLG 180 (320)
Q Consensus 104 s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~-~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~~~~ 180 (320)
|+.+...++.+.+++++.++++.++.++++++|||+||.+++ .+|..+|+++.+++++++............ .....
T Consensus 60 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 139 (271)
T d1va4a_ 60 SDQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDV 139 (271)
T ss_dssp SCCCSSCCSHHHHHHHHHHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHH
T ss_pred ccccccccccccccccceeeeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhH
Confidence 998888889999999999999999999999999999887654 567778999999999987654322211100 00000
Q ss_pred ccccccccCcCcHHHHHHHHhHhhh--ccccCCchhHHHHHHHH-hcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEec
Q 020916 181 VSSSSELLLPNSVKGLKALLSVATY--KKLWFPSCLYKDFLEVM-FANRKERAELLEGLLISNKDPTVPNFPQRVHLLWG 257 (320)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 257 (320)
......................... ................. .............+...+....+.++++|+++++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 219 (271)
T d1va4a_ 140 FARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHG 219 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEE
T ss_pred HHHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeeccc
Confidence 0000000000000000111111110 11111111111111111 12222223333333333334456678999999999
Q ss_pred CCCCCCCHHHHHHHH-HHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 258 EDDQIFNVELAHNMK-EQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 258 ~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++|.++|.+...++. +.++ ++++++++++||++++++|+++++.|.+||++
T Consensus 220 ~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 220 DGDQIVPFETTGKVAAELIK--GAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp TTCSSSCGGGTHHHHHHHST--TCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHhCC--CCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 999999988876665 4456 89999999999999999999999999999974
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9e-38 Score=243.66 Aligned_cols=239 Identities=16% Similarity=0.161 Sum_probs=160.8
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
.+++|||+||+++++. .|..+++.|+++|+|+++|+||||.|+... ..+. .|+.+.+..+..++++++||||||
T Consensus 10 g~~~lvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~-~~~~----~d~~~~~~~~~~~~~~l~GhS~Gg 83 (256)
T d1m33a_ 10 GNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSL----ADMAEAVLQQAPDKAIWLGWSLGG 83 (256)
T ss_dssp CSSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECCTTSTTCCSCC-CCCH----HHHHHHHHTTSCSSEEEEEETHHH
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEeCCCCCCccccc-cccc----cccccccccccccceeeeecccch
Confidence 4578999999999999 999999999988999999999999997543 3343 344555566677899999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCc---hhHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPS---CLYKDF 218 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 218 (320)
.+++.+|.++|+++++++++++.+..................... .........+............ ......
T Consensus 84 ~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T d1m33a_ 84 LVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQ----QLSDDQQRTVERFLALQTMGTETARQDARAL 159 (256)
T ss_dssp HHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHH----HHHHHHHHHHHHHHHTTSTTSTTHHHHHHHH
T ss_pred HHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHh----hhhhhhHHHHHHHhhhhhccccchhhHHHHH
Confidence 999999999999999999998765432221111111000000000 0000011111111111111111 111111
Q ss_pred HHHHh----cChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccccc
Q 020916 219 LEVMF----ANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 219 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 294 (320)
..... ............+...+....++++++|+++|+|++|.++|++..+.+.+.++ ++++++++++||++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~~--~~~~~~i~~~gH~~~~ 237 (256)
T d1m33a_ 160 KKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP--HSESYIFAKAAHAPFI 237 (256)
T ss_dssp HHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT--TCEEEEETTCCSCHHH
T ss_pred HHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHCC--CCEEEEECCCCCchHH
Confidence 11111 11122222333344445556778899999999999999999999999998888 8999999999999999
Q ss_pred CChHHHHHHHHHHHHhhh
Q 020916 295 ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 295 ~~~~~~~~~i~~fl~~~~ 312 (320)
|+|+++++.|.+|++++.
T Consensus 238 e~p~~~~~~l~~fl~~ig 255 (256)
T d1m33a_ 238 SHPAEFCHLLVALKQRVG 255 (256)
T ss_dssp HSHHHHHHHHHHHHTTSC
T ss_pred HCHHHHHHHHHHHHHHcC
Confidence 999999999999998763
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=9.5e-38 Score=250.42 Aligned_cols=261 Identities=13% Similarity=0.172 Sum_probs=176.8
Q ss_pred CCCceEEEc---CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEe
Q 020916 20 GVQPHAVEI---EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYI 95 (320)
Q Consensus 20 ~~~~~~~~~---~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~ 95 (320)
.++.+++.. .||.+++|+..|++ ...|+|||+||+++++. .|..++..|.+. |+|++
T Consensus 19 p~~~~~~~~~~~~~g~~~~y~~~G~~------------------~~~p~llllHG~~~~~~-~~~~~~~~l~~~~~~vi~ 79 (310)
T d1b6ga_ 19 PFSPNYLDDLPGYPGLRAHYLDEGNS------------------DAEDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIA 79 (310)
T ss_dssp CCCCEEEESCTTCTTCEEEEEEEECT------------------TCSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEE
T ss_pred CCCCceeccccCCCCEEEEEEEecCC------------------CCCCEEEEECCCCCchH-HHHHHHHHhhccCceEEE
Confidence 456777763 28999999988762 24678999999999999 999999999877 99999
Q ss_pred cCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccc
Q 020916 96 PDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINE 173 (320)
Q Consensus 96 ~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 173 (320)
+|+||||.|..+. ..++.+.+++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++..........
T Consensus 80 ~Dl~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~ 159 (310)
T d1b6ga_ 80 PDFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQP 159 (310)
T ss_dssp ECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCT
T ss_pred eeecCccccccccccccccccccccchhhhhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccch
Confidence 9999999998654 34799999999999999999999999999999999999999999999999999987643222111
Q ss_pred ccccccccccccc------cc--CcCcHHHHHHHHhHhhhccccCCchhHHHHHH----------------HHhcChhhH
Q 020916 174 TNLNRLGVSSSSE------LL--LPNSVKGLKALLSVATYKKLWFPSCLYKDFLE----------------VMFANRKER 229 (320)
Q Consensus 174 ~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~ 229 (320)
............. .. .......+.... .....+.....+.. .........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (310)
T d1b6ga_ 160 AFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRW------APTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAC 233 (310)
T ss_dssp HHHHTTTSSTTTHHHHHHHHHSCSSCCHHHHHHHH------STTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHH
T ss_pred hHHHHhhcchhhhhhhhhhhccchhhhhhhhhhcc------CccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhh
Confidence 1100000000000 00 000000000000 00011111111100 000000000
Q ss_pred HHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 230 AELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
...... ........+++|+++++|++|.+++++..+.+.+.++ ...++++++++||+++.++|+.+++.|.+||+
T Consensus 234 ~~~~~~----~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~ 308 (310)
T d1b6ga_ 234 IDISTE----AISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALIN-GCPEPLEIADAGHFVQEFGEQVAREALKHFAE 308 (310)
T ss_dssp HHHHHH----HHHHHHHTCCSEEEEEEETTCSSSSHHHHHHHHHHST-TCCCCEEETTCCSCGGGGHHHHHHHHHHHHHH
T ss_pred hhhhhh----hhHHhhcccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-CCccEEEECCCcCchhhhCHHHHHHHHHHHHh
Confidence 000000 0001124578999999999999999999999999887 22478899999999999999999999999998
Q ss_pred h
Q 020916 310 S 310 (320)
Q Consensus 310 ~ 310 (320)
+
T Consensus 309 ~ 309 (310)
T d1b6ga_ 309 T 309 (310)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=6.8e-37 Score=241.55 Aligned_cols=245 Identities=20% Similarity=0.204 Sum_probs=161.3
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYG 140 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~G 140 (320)
++|+|||+||+++++. .|..+++.|.+. |+|+++|+||||.|+.+...++++.+++|+.+++++++.++++|+|||||
T Consensus 22 ~g~~illlHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~l~~~~~~lvGhS~G 100 (279)
T d1hkha_ 22 SGQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLDLRDVVLVGFSMG 100 (279)
T ss_dssp SSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHTCCSEEEEEETHH
T ss_pred cCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhhhcCcCcccccccccc
Confidence 5789999999999999 999999887555 99999999999999988888999999999999999999999999999999
Q ss_pred H-HHHHHHHHhCccccccEEEeccccccccccccccc--ccccccccccccCcCcHHHHHHHHhH----hhhccccCCch
Q 020916 141 G-MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL--NRLGVSSSSELLLPNSVKGLKALLSV----ATYKKLWFPSC 213 (320)
Q Consensus 141 g-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 213 (320)
| .++..++..+|++|.+++++++............. ...................+...... .........+.
T Consensus 101 g~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (279)
T d1hkha_ 101 TGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQ 180 (279)
T ss_dssp HHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHH
T ss_pred ccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhhcccchhhhhhhhhh
Confidence 6 66667788889999999999876533221111000 00000000000000000111111111 11111112222
Q ss_pred hHHHHHHHHhc-ChhhHHHHhhhhhccCCC---CCCCCCCCcEEEEecCCCCCCCHH-HHHHHHHHhCCCCeEEEEecCC
Q 020916 214 LYKDFLEVMFA-NRKERAELLEGLLISNKD---PTVPNFPQRVHLLWGEDDQIFNVE-LAHNMKEQLGADHVTFQGIKKA 288 (320)
Q Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 288 (320)
........... ............. .+.. ..+..+++|+++++|++|.+++.+ ..+.+.+.++ ++++++++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~p--~~~~~~i~~~ 257 (279)
T d1hkha_ 181 AVTGSWNVAIGSAPVAAYAVVPAWI-EDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP--EADYVEVEGA 257 (279)
T ss_dssp HHHHHHHHHHTSCTTHHHHTHHHHT-CBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCT--TSEEEEETTC
T ss_pred hhhhhhhhhcccchhhhhhhhhhhh-cccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhCC--CCEEEEECCC
Confidence 22222222211 1111111111110 0000 223557899999999999999865 4677788888 8999999999
Q ss_pred CcccccCChHHHHHHHHHHHHh
Q 020916 289 GHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 289 gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
||+++.|+|+++++.|.+||++
T Consensus 258 gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 258 PHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp CTTHHHHTHHHHHHHHHHHHHC
T ss_pred CCchHHhCHHHHHHHHHHHHCc
Confidence 9999999999999999999974
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=2.6e-36 Score=242.26 Aligned_cols=264 Identities=16% Similarity=0.123 Sum_probs=169.0
Q ss_pred CCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCC
Q 020916 20 GVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLL 99 (320)
Q Consensus 20 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~ 99 (320)
..+.++++++||.+|+|...|+ +++|+|||+||+++++. .|......+.++|+|+++|+|
T Consensus 10 P~~~~~i~~~dg~~i~y~~~G~-------------------~~g~pvvllHG~~g~~~-~~~~~~~~l~~~~~Vi~~D~r 69 (313)
T d1azwa_ 10 PYQQGSLKVDDRHTLYFEQCGN-------------------PHGKPVVMLHGGPGGGC-NDKMRRFHDPAKYRIVLFDQR 69 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEEC-------------------TTSEEEEEECSTTTTCC-CGGGGGGSCTTTEEEEEECCT
T ss_pred CCCCCEEEeCCCcEEEEEEecC-------------------CCCCEEEEECCCCCCcc-chHHHhHHhhcCCEEEEEecc
Confidence 4578899999999999998886 47889999999998888 888776666666999999999
Q ss_pred CCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc-
Q 020916 100 FFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL- 176 (320)
Q Consensus 100 G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~- 176 (320)
|||.|+.+. ..++.+++++|+.+++++++.++++|+||||||.+++.+|.++|++|++++++++.............
T Consensus 70 G~G~S~~~~~~~~~~~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~ 149 (313)
T d1azwa_ 70 GSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQE 149 (313)
T ss_dssp TSTTSBSTTCCTTCCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTS
T ss_pred ccCCCCccccccchhHHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhc
Confidence 999998654 44789999999999999999999999999999999999999999999999999976643221100000
Q ss_pred --cccc-------ccccccccCcCcHHHHH----------------HHHhHhhhc-cccCCchhHHHHHHHHhcC-hhh-
Q 020916 177 --NRLG-------VSSSSELLLPNSVKGLK----------------ALLSVATYK-KLWFPSCLYKDFLEVMFAN-RKE- 228 (320)
Q Consensus 177 --~~~~-------~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~- 228 (320)
.... ................. .+....... ................... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (313)
T d1azwa_ 150 GASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARI 229 (313)
T ss_dssp SHHHHCHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHH
Confidence 0000 00000000000000000 000000000 0000000000000000000 000
Q ss_pred HHHHhhhhhccC-----CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH---H
Q 020916 229 RAELLEGLLISN-----KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA---Y 300 (320)
Q Consensus 229 ~~~~~~~~~~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~---~ 300 (320)
............ .......+++|+++|+|++|.++|++..+.+.+.++ ++++++++++||+++ +|+. +
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p--~a~~~~i~~aGH~~~--ep~~~~~l 305 (313)
T d1azwa_ 230 ENHYFVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWP--KAQLQISPASGHSAF--EPENVDAL 305 (313)
T ss_dssp HHHHHHTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCT--TSEEEEETTCCSSTT--SHHHHHHH
T ss_pred HHHHHhhccccccchhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCC--CCEEEEECCCCCCCC--CchHHHHH
Confidence 000000000000 012345678999999999999999999999999998 999999999999976 3543 4
Q ss_pred HHHHHHH
Q 020916 301 NRCLKQF 307 (320)
Q Consensus 301 ~~~i~~f 307 (320)
.+++.+|
T Consensus 306 i~a~~~f 312 (313)
T d1azwa_ 306 VRATDGF 312 (313)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4444444
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-37 Score=232.18 Aligned_cols=197 Identities=20% Similarity=0.252 Sum_probs=160.6
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHH--HHHHhhcc-ceEEecCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQF--QVGALTKK-YSVYIPDL 98 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~--~~~~l~~~-~~vi~~d~ 98 (320)
+..+|++ ||.+++|...++.. .+.+++|||+||++++.. .|.. +++.|++. |+|+++|+
T Consensus 7 ~e~~i~v-~G~~i~y~~~~~~~----------------~~~~~~vvllHG~~~~~~-~w~~~~~~~~la~~gy~via~D~ 68 (208)
T d1imja_ 7 REGTIQV-QGQALFFREALPGS----------------GQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDL 68 (208)
T ss_dssp CCCCEEE-TTEEECEEEEECSS----------------SCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECC
T ss_pred eEEEEEE-CCEEEEEEEecCCC----------------CCCCCeEEEECCCCCChh-HHhhhHHHHHHHHcCCeEEEeec
Confidence 4567888 79999998766521 136789999999999998 8977 46888887 99999999
Q ss_pred CCCCCCCCCCCC--CChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 99 LFFGGSITDEAD--RSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 99 ~G~G~s~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
||||.|..+... ++....++++.++++.++.++++|+||||||.+++.+|.++|++++++|+++|......
T Consensus 69 ~G~G~S~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~~------- 141 (208)
T d1imja_ 69 PGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI------- 141 (208)
T ss_dssp TTSGGGTTSCCSSCTTSCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS-------
T ss_pred ccccCCCCCCcccccchhhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccccc-------
Confidence 999999876533 44455677889999999999999999999999999999999999999999987531000
Q ss_pred ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEe
Q 020916 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLW 256 (320)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (320)
.. ..+.++++|+|+|+
T Consensus 142 ----------------------------------~~------------------------------~~~~~i~~P~Lii~ 157 (208)
T d1imja_ 142 ----------------------------------NA------------------------------ANYASVKTPALIVY 157 (208)
T ss_dssp ----------------------------------CH------------------------------HHHHTCCSCEEEEE
T ss_pred ----------------------------------cc------------------------------cccccccccccccc
Confidence 00 01245789999999
Q ss_pred cCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 257 GEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 257 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
|++|.++|.+. ...+.++ +.++.+++|+||..++++|+++.+.+.+||+++
T Consensus 158 G~~D~~~~~~~--~~~~~~~--~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~L 208 (208)
T d1imja_ 158 GDQDPMGQTSF--EHLKQLP--NHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 208 (208)
T ss_dssp ETTCHHHHHHH--HHHTTSS--SEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred CCcCcCCcHHH--HHHHhCC--CCeEEEECCCCCchhhhCHHHHHHHHHHHHhcC
Confidence 99999887553 4456677 899999999999999999999999999999864
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=5.7e-35 Score=232.15 Aligned_cols=263 Identities=14% Similarity=0.095 Sum_probs=165.7
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFF 101 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~ 101 (320)
+.+++++ ||.+|+|...| ++|+|||+||+++++. .|..+++.|+++|+|+++|+|||
T Consensus 9 ~~~fi~~-~g~~i~y~~~G---------------------~g~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~ 65 (298)
T d1mj5a_ 9 EKKFIEI-KGRRMAYIDEG---------------------TGDPILFQHGNPTSSY-LWRNIMPHCAGLGRLIACDLIGM 65 (298)
T ss_dssp CCEEEEE-TTEEEEEEEES---------------------CSSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTS
T ss_pred CCEEEEE-CCEEEEEEEEc---------------------CCCcEEEECCCCCCHH-HHHHHHHHHhcCCEEEEEeCCCC
Confidence 5678999 79999999877 4689999999999999 99999999998899999999999
Q ss_pred CCCCCCCCC----CChhHHHHHHHHHHH-HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 102 GGSITDEAD----RSPTFQAQCLATGLA-KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 102 G~s~~~~~~----~~~~~~~~~l~~~l~-~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
|.|+..... .......+++..++. ..+.++++++||||||.+++.++.++|++|.+++++++.............
T Consensus 66 G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~ 145 (298)
T d1mj5a_ 66 GDSDKLDPSGPERYAYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQ 145 (298)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGG
T ss_pred CCCCCCccccccccccchhhhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhh
Confidence 999876533 334444555555544 445678999999999999999999999999999999877644332211110
Q ss_pred ccccccccccc----cCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhh--------------c
Q 020916 177 NRLGVSSSSEL----LLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLL--------------I 238 (320)
Q Consensus 177 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 238 (320)
........... ............... .............+................... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (298)
T d1mj5a_ 146 DRDLFQAFRSQAGEELVLQDNVFVEQVLPG--LILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIA 223 (298)
T ss_dssp GHHHHHHHHSTTHHHHHTTTCHHHHTHHHH--TSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhhhhhhhhhccc--cccccchhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhh
Confidence 00000000000 000000000000000 000001111111111111100000000000000 0
Q ss_pred cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 239 SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 239 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
......+..+++|+++++|++|.+.+ ...+.+.+.++ +.++++++ +||++++|+|+++++.|.+||+++.+
T Consensus 224 ~~~~~~~~~~~~P~l~i~g~~d~~~~-~~~~~~~~~~p--~~~~~~~~-~GH~~~~e~P~~v~~~i~~fl~~~~~ 294 (298)
T d1mj5a_ 224 RDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTWP--NQTEITVA-GAHFIQEDSPDEIGAAIAAFVRRLRP 294 (298)
T ss_dssp HHHHHHHTTCCSCEEEEEEEECSSSS-HHHHHHHTTCS--SEEEEEEE-ESSCGGGTCHHHHHHHHHHHHHHHSC
T ss_pred hhhhhhhhhcceeEEEEecCCCCcCh-HHHHHHHHHCC--CCEEEEeC-CCCchHHhCHHHHHHHHHHHHhhhcc
Confidence 00012346678999999999998766 45677888887 78877665 69999999999999999999999854
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=2e-35 Score=229.72 Aligned_cols=240 Identities=19% Similarity=0.110 Sum_probs=164.7
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhCC-CcEEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLGV-DKCVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~~-~~~~lvGhS~ 139 (320)
+++|||+||+++++. .|+.+++.|+++ |+|+++|+||||.|+.+. ..++..+++.++..+++.... .+++++|||+
T Consensus 2 G~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~ 80 (258)
T d1xkla_ 2 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSL 80 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETT
T ss_pred CCcEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcccccccccccccch
Confidence 679999999999999 999999999987 999999999999998764 447888999999999988765 5799999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccccccccccccccccccccc-------------cccccCcCcHHHHHHHHhHhhhc
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSS-------------SSELLLPNSVKGLKALLSVATYK 206 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 206 (320)
||.+++.++.++|++++++|++++.................... .......................
T Consensus 81 Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (258)
T d1xkla_ 81 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQ 160 (258)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTST
T ss_pred hHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhcccccccHHHHHHHhhh
Confidence 99999999999999999999999765433221111110000000 00000000000000000000000
Q ss_pred cccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEec
Q 020916 207 KLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIK 286 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (320)
. ................. .....+...........+++|+++|+|++|..+|++..+.+.+.++ ++++++++
T Consensus 161 ~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~i~ 232 (258)
T d1xkla_ 161 L---CSPEDLALASSLVRPSS---LFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG--VTEAIEIK 232 (258)
T ss_dssp T---SCHHHHHHHHHHCCCBC---CCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHC--CSEEEEET
T ss_pred c---ccHHHHHHhhhhhhhhh---hhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHCC--CCEEEEEC
Confidence 0 00000001111100000 1111222233445667788999999999999999999999999998 89999999
Q ss_pred CCCcccccCChHHHHHHHHHHHHhh
Q 020916 287 KAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 287 ~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++||++++|+|+++++.|.+|+++.
T Consensus 233 ~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 233 GADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp TCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCCchHHhCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999874
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=2e-33 Score=224.64 Aligned_cols=259 Identities=15% Similarity=0.123 Sum_probs=169.5
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCC
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDL 98 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~ 98 (320)
..++.++++++||.+|+|...|+ +++|+||||||+++++. .|..+...|+++|+|+++|+
T Consensus 9 ~p~~~~~v~~~dG~~i~y~~~G~-------------------~~g~pvvllHG~~~~~~-~w~~~~~~l~~~~~vi~~D~ 68 (313)
T d1wm1a_ 9 AAYDSGWLDTGDGHRIYWELSGN-------------------PNGKPAVFIHGGPGGGI-SPHHRQLFDPERYKVLLFDQ 68 (313)
T ss_dssp CCSEEEEEECSSSCEEEEEEEEC-------------------TTSEEEEEECCTTTCCC-CGGGGGGSCTTTEEEEEECC
T ss_pred CCCcCCEEEeCCCcEEEEEEecC-------------------CCCCeEEEECCCCCccc-chHHHHHHhhcCCEEEEEeC
Confidence 35677889999999999999886 46789999999999999 99999988888899999999
Q ss_pred CCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 99 LFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 99 ~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
||||.|+... ..++...+++|+..++++++..+++++|||+||.++..+|..+|++|.+++++++.............
T Consensus 69 rG~G~S~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~ 148 (313)
T d1wm1a_ 69 RGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQ 148 (313)
T ss_dssp TTSTTCBSTTCCTTCSHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHT
T ss_pred CCcccccccccccccchhhHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccc
Confidence 9999998655 34778889999999999999999999999999999999999999999999999876542111100000
Q ss_pred ccc---------c-ccccccccC------------cCcHHHHHH----HHhHhhhccccCCc-hh----HHHHHHHHhcC
Q 020916 177 NRL---------G-VSSSSELLL------------PNSVKGLKA----LLSVATYKKLWFPS-CL----YKDFLEVMFAN 225 (320)
Q Consensus 177 ~~~---------~-~~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~~~~~-~~----~~~~~~~~~~~ 225 (320)
... . ......... ......... .............. .. .........
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 226 (313)
T d1wm1a_ 149 DGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFA-- 226 (313)
T ss_dssp SSGGGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHH--
T ss_pred cccchhhhhhhhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhh--
Confidence 000 0 000000000 000000000 00000000000000 00 000000000
Q ss_pred hhhHHHHhhhhhccC-----CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHH
Q 020916 226 RKERAELLEGLLISN-----KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAY 300 (320)
Q Consensus 226 ~~~~~~~~~~~~~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 300 (320)
.............. .......+++|+++|+|++|.++|++.++.+.+.++ ++++++++++||++ ++|+.+
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p--~a~~~~i~~aGH~~--~eP~~~ 301 (313)
T d1wm1a_ 227 -RIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP--EAELHIVEGAGHSY--DEPGIL 301 (313)
T ss_dssp -HHHHHHHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT--TSEEEEETTCCSST--TSHHHH
T ss_pred -hhhhhhhhhhcccccchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCC--CCEEEEECCCCCCc--CCchHH
Confidence 00000000000000 013345578999999999999999999999999998 99999999999964 457766
Q ss_pred HHHH
Q 020916 301 NRCL 304 (320)
Q Consensus 301 ~~~i 304 (320)
.+.|
T Consensus 302 ~~lv 305 (313)
T d1wm1a_ 302 HQLM 305 (313)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=2.5e-33 Score=217.79 Aligned_cols=238 Identities=18% Similarity=0.083 Sum_probs=160.4
Q ss_pred eEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHhC-CCcEEEEEeChhH
Q 020916 65 VVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKLG-VDKCVLVGFSYGG 141 (320)
Q Consensus 65 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~~-~~~~~lvGhS~Gg 141 (320)
-.|||||+++++. .|+.+++.|.+. |+|+++|+||||.|+.+. ..++.+++++++.++++.+. .++++|+||||||
T Consensus 4 ~~vliHG~~~~~~-~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg 82 (256)
T d3c70a1 4 HFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGG 82 (256)
T ss_dssp EEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHH
T ss_pred cEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhccccceeecccchHH
Confidence 3699999999999 999999999987 999999999999998764 45789999999999988875 6789999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccc----------cccccccCcCc-HHHHHHHHhHhhhccccC
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGV----------SSSSELLLPNS-VKGLKALLSVATYKKLWF 210 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 210 (320)
.+++.++.++|++|+++|++++.................. ........... ...............
T Consensus 83 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 159 (256)
T d3c70a1 83 LNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTL--- 159 (256)
T ss_dssp HHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTT---
T ss_pred HHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhh---
Confidence 9999999999999999999997654332211110000000 00000000000 000000000000000
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCc
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 290 (320)
................... ...............+++|+++|+|++|..+|++..+.+.+.++ +.++++++|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p--~~~~~~i~~agH 234 (256)
T d3c70a1 160 CGPEEYELAKMLTRKGSLF---QNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK--PDKVYKVEGGDH 234 (256)
T ss_dssp SCHHHHHHHHHHCCCBCCC---HHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC--CSEEEECCSCCS
T ss_pred cchhhHHHhhhhhhhhhHH---HhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHCC--CCEEEEECCCCC
Confidence 0000001111111000000 01111122223455578999999999999999999999999998 899999999999
Q ss_pred ccccCChHHHHHHHHHHHHhh
Q 020916 291 LVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 291 ~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++++++|+++++.|.+|+++.
T Consensus 235 ~~~~e~P~~~~~~l~~~~~~~ 255 (256)
T d3c70a1 235 KLQLTKTKEIAEILQEVADTY 255 (256)
T ss_dssp CHHHHSHHHHHHHHHHHHHHC
T ss_pred chHHhCHHHHHHHHHHHHHhc
Confidence 999999999999999999864
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=100.00 E-value=2e-32 Score=213.36 Aligned_cols=240 Identities=18% Similarity=0.200 Sum_probs=141.7
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCC-ChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADR-SPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
++|+|||+||+++++. .|..+++.|++. |+|+++|+||||.|....... .......+........+.++++++||||
T Consensus 15 ~~P~ivllHG~~~~~~-~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGhS~ 93 (264)
T d1r3da_ 15 RTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHVTSEVPVILVGYSL 93 (264)
T ss_dssp TBCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTTCCTTSEEEEEEETH
T ss_pred CCCeEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhcccccccccCceeeeeecc
Confidence 7789999999999999 999999999876 999999999999998665432 2223333333334444567899999999
Q ss_pred hHHHHHHHHHhCccccccEEEeccccccccccccccccccc--ccccccccCcCcHHHH-HHHHhHhhhccccCCchhHH
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLG--VSSSSELLLPNSVKGL-KALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 216 (320)
||.+++.++.++|+.+.+++++................... ................ ........ ..........
T Consensus 94 Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 171 (264)
T d1r3da_ 94 GGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQQAV--FSSLNHEQRQ 171 (264)
T ss_dssp HHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTTSGG--GTTCCHHHHH
T ss_pred hHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh--hcccchHHHH
Confidence 99999999999999999988877655332221111000000 0000000000000000 00000000 0111112222
Q ss_pred HHHHHHhcCh-hhHHHHhhhhhc---cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCccc
Q 020916 217 DFLEVMFANR-KERAELLEGLLI---SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLV 292 (320)
Q Consensus 217 ~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 292 (320)
.......... ............ ......+..+++|+++|+|++|..+ ..+.+. + ++++++++|+||++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~-----~~~~~~-~--~~~~~~i~~~gH~~ 243 (264)
T d1r3da_ 172 TLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAES-S--GLSYSQVAQAGHNV 243 (264)
T ss_dssp HHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHH-H--CSEEEEETTCCSCH
T ss_pred HHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHH-----HHHHhc-C--CCeEEEECCCCCch
Confidence 2222221111 111111111111 1112345678899999999999643 233333 4 78999999999999
Q ss_pred ccCChHHHHHHHHHHHHhhh
Q 020916 293 HLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 293 ~~~~~~~~~~~i~~fl~~~~ 312 (320)
++|+|+++++.|.+||+++.
T Consensus 244 ~~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 244 HHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HHHCHHHHHHHHHHHHHHHC
T ss_pred HHHCHHHHHHHHHHHHHhcc
Confidence 99999999999999999864
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=4.3e-32 Score=223.80 Aligned_cols=273 Identities=13% Similarity=0.102 Sum_probs=177.3
Q ss_pred HHhcCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-----
Q 020916 16 MKMAGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK----- 90 (320)
Q Consensus 16 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~----- 90 (320)
.....+....+++ ||.+|||...+. +.+++++|||+||++++.. .|+.+++.|++.
T Consensus 77 ~~ln~~~~f~~~i-~G~~iHf~h~~~-----------------~~~~~~pLlLlHG~P~s~~-~w~~vi~~La~~g~~~~ 137 (394)
T d1qo7a_ 77 ARLNSFPQFTTEI-EGLTIHFAALFS-----------------EREDAVPIALLHGWPGSFV-EFYPILQLFREEYTPET 137 (394)
T ss_dssp HHHTTSCEEEEEE-TTEEEEEEEECC-----------------SCTTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTT
T ss_pred HHHHcCCCeEEEE-CCEEEEEEEEec-----------------cCCCCCEEEEeccccccHH-HHHHHHHhhccccCCcc
Confidence 3345677777888 799999975544 2357899999999999999 999999999875
Q ss_pred --ceEEecCCCCCCCCCCCC--CCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 91 --YSVYIPDLLFFGGSITDE--ADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 91 --~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|+||++|+||||.|+.+. ..++...+++++..+++.++.++.+++|||+||.++..++..+|+++.+++++.....
T Consensus 138 ~~f~VIaPDLpG~G~S~~P~~~~~y~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 138 LPFHLVVPSLPGYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMR 217 (394)
T ss_dssp CCEEEEEECCTTSTTSCCCCSSSCCCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred cceeeecccccccCCCCCCCCCCccCHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeeccc
Confidence 999999999999999765 4589999999999999999999999999999999999999999999999998876654
Q ss_pred ccccccccccc-cccc---ccccc--------------------ccCcCcHHHHHHHHhHhh-h-ccccCCchhHHHHHH
Q 020916 167 MTDSINETNLN-RLGV---SSSSE--------------------LLLPNSVKGLKALLSVAT-Y-KKLWFPSCLYKDFLE 220 (320)
Q Consensus 167 ~~~~~~~~~~~-~~~~---~~~~~--------------------~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ 220 (320)
........... .... ..... .........+...+.... . ...............
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~ 297 (394)
T d1qo7a_ 218 APPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDKPLPSETILEMVS 297 (394)
T ss_dssp SCSSSCCGGGSCHHHHHHHHHHHHHHHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSSCCCHHHHHHHHH
T ss_pred ccccccccccchhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccccCCHHHHHHHHH
Confidence 33221110000 0000 00000 000000000000000000 0 001111122222222
Q ss_pred HHhcChhh--HHHH-hhhhhc------cCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 221 VMFANRKE--RAEL-LEGLLI------SNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 221 ~~~~~~~~--~~~~-~~~~~~------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
.+...... .... ...... ........++++|+++++|.+|...+++ .+.+.+. ....+.+++++||+
T Consensus 298 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~-~~~~~~~~~~~GHf 373 (394)
T d1qo7a_ 298 LYWLTESFPRAIHTYRETTPTASAPNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTG-NLVFFRDHAEGGHF 373 (394)
T ss_dssp HHHHTTCHHHHGGGHHHHCC---------CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGE-EEEEEEECSSCBSC
T ss_pred HHhhccccchhHHHHHHHhhcccccchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhcc-CceEEEEcCCcCCc
Confidence 22111111 1111 111100 0111344568899999999999876654 3455665 23567889999999
Q ss_pred cccCChHHHHHHHHHHHHhh
Q 020916 292 VHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~~~ 311 (320)
+++|+|+++++.|.+|++++
T Consensus 374 ~~~E~Pe~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 374 AALERPRELKTDLTAFVEQV 393 (394)
T ss_dssp HHHHCHHHHHHHHHHHHHHH
T ss_pred hHHhCHHHHHHHHHHHHHHh
Confidence 99999999999999999975
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.98 E-value=7.6e-31 Score=215.47 Aligned_cols=283 Identities=15% Similarity=0.127 Sum_probs=170.1
Q ss_pred HHHHHhcCC--CceEEEcCCCceeeEec--cCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHH------H
Q 020916 13 QGLMKMAGV--QPHAVEIEPGTTMNFWV--PRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ------F 82 (320)
Q Consensus 13 ~~~~~~~~~--~~~~~~~~~g~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~------~ 82 (320)
...++..++ +.++|+++||..|..+. .++.... ..+.+|+|||+||+++++. .|. .
T Consensus 17 ~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~-------------~~~~~~~vlllHG~~~~~~-~~~~~~~~~s 82 (377)
T d1k8qa_ 17 SQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSE-------------NIGRRPVAFLQHGLLASAT-NWISNLPNNS 82 (377)
T ss_dssp HHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSSCCT-------------TTTTCCEEEEECCTTCCGG-GGSSSCTTTC
T ss_pred HHHHHHcCCCceEEEEEcCCCCEEEEEEecCCCCCCc-------------cCCCCCeEEEECCCccchh-HHhhcCccch
Confidence 344444444 77889999997775532 2221111 2357899999999999988 884 3
Q ss_pred HHHHhhcc-ceEEecCCCCCCCCCCCCC---------CCChh-----HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHH
Q 020916 83 QVGALTKK-YSVYIPDLLFFGGSITDEA---------DRSPT-----FQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKV 147 (320)
Q Consensus 83 ~~~~l~~~-~~vi~~d~~G~G~s~~~~~---------~~~~~-----~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~ 147 (320)
++..|.+. |+|+++|+||||.|+.+.. ..+.+ ++.+++..+++.++.++++|+||||||.+++.+
T Consensus 83 la~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~ 162 (377)
T d1k8qa_ 83 LAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIA 162 (377)
T ss_dssp HHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHH
Confidence 67888877 9999999999999976432 12333 345566667777788999999999999999999
Q ss_pred HHhCccccccEEEecccccccccccc-cccccccc--------cccccccCc-CcH---------------HHHHHHHhH
Q 020916 148 AELYPNLVQAMVVSGSILAMTDSINE-TNLNRLGV--------SSSSELLLP-NSV---------------KGLKALLSV 202 (320)
Q Consensus 148 a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~-~~~---------------~~~~~~~~~ 202 (320)
|..+|+.+++++++............ ........ ......... ... .........
T Consensus 163 a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (377)
T d1k8qa_ 163 FSTNPKLAKRIKTFYALAPVATVKYTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFI 242 (377)
T ss_dssp HHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHH
T ss_pred HHhhhhhhhhceeEeeccccccccchhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhh
Confidence 99999999999887655432211110 00000000 000000000 000 000000000
Q ss_pred hh-hccccCCchhHHHHHHHHhcC--hhhHHH---------------------HhhhhhccCCCCCCCCCCCcEEEEecC
Q 020916 203 AT-YKKLWFPSCLYKDFLEVMFAN--RKERAE---------------------LLEGLLISNKDPTVPNFPQRVHLLWGE 258 (320)
Q Consensus 203 ~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------------------~~~~~~~~~~~~~~~~~~~P~l~i~g~ 258 (320)
.. .............+....... ...... .............+.++++|+|+|+|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~ 322 (377)
T d1k8qa_ 243 ICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGG 322 (377)
T ss_dssp HHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEET
T ss_pred hcCCCcccccHHHhhhhhhcccccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeC
Confidence 00 000111111111111100000 000000 000001112224577899999999999
Q ss_pred CCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc---cCChHHHHHHHHHHHHh
Q 020916 259 DDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH---LERPCAYNRCLKQFLAS 310 (320)
Q Consensus 259 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~i~~fl~~ 310 (320)
+|.+++++..+.+.+.++ ...+.++++++||+.+ .+.++++...|.+||+.
T Consensus 323 ~D~~~~~~~~~~l~~~lp-~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 323 NDLLADPHDVDLLLSKLP-NLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp TCSSSCHHHHHHHHTTCT-TEEEEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred CCCccCHHHHHHHHHHCC-CCeEEEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 999999999999999998 3357889999999843 36689999999999975
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.98 E-value=2.1e-31 Score=211.17 Aligned_cols=235 Identities=16% Similarity=0.162 Sum_probs=154.2
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCC
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLF 100 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G 100 (320)
..+.+++.||.+|++|.+.+.... +..+++||++||++++.. .|..+++.|.++ |+|+++|+||
T Consensus 5 ~~h~~~~~dg~~l~~w~~~p~~~~--------------~~~~~~Vvi~HG~~~~~~-~~~~~a~~L~~~G~~Vi~~D~rG 69 (302)
T d1thta_ 5 IAHVLRVNNGQELHVWETPPKENV--------------PFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLH 69 (302)
T ss_dssp EEEEEEETTTEEEEEEEECCCTTS--------------CCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCB
T ss_pred eeeEEEcCCCCEEEEEEecCcCCC--------------CCCCCEEEEeCCCcchHH-HHHHHHHHHHHCCCEEEEecCCC
Confidence 457788999999999988764322 135689999999999998 999999999998 9999999999
Q ss_pred C-CCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccccccc
Q 020916 101 F-GGSITDEADRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNL 176 (320)
Q Consensus 101 ~-G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 176 (320)
| |.|+.....++.....+|+.++++.+ +.++++|+||||||.+++.+|.. .+++++|+.++........... +
T Consensus 70 h~G~S~g~~~~~~~~~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~~~~-~ 146 (302)
T d1thta_ 70 HVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTLEKA-L 146 (302)
T ss_dssp CC--------CCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHHHHH-H
T ss_pred CCCCCCCcccCCCHHHHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHHHHH-H
Confidence 8 88887667788888888888887776 56799999999999999998865 3589999888765432111000 0
Q ss_pred ccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhh-HHHHhhhhhccCCCCCCCCCCCcEEEE
Q 020916 177 NRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKE-RAELLEGLLISNKDPTVPNFPQRVHLL 255 (320)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l~i 255 (320)
.... ........+... ...........+.......... ..... ..+.++++|+|++
T Consensus 147 ~~~~-~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~PvLii 203 (302)
T d1thta_ 147 GFDY-LSLPIDELPNDL-------------DFEGHKLGSEVFVRDCFEHHWDTLDSTL---------DKVANTSVPLIAF 203 (302)
T ss_dssp SSCG-GGSCGGGCCSEE-------------EETTEEEEHHHHHHHHHHTTCSSHHHHH---------HHHTTCCSCEEEE
T ss_pred hhcc-chhhhhhccccc-------------cccccchhhHHHHHHHHHhHHHHHHHHH---------HHHhhcCCCEEEE
Confidence 0000 000000000000 0000001111122221111100 00111 1346789999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChH
Q 020916 256 WGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPC 298 (320)
Q Consensus 256 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 298 (320)
+|++|.++|++.++.+.+.+++.++++++++|++|.+. ++++
T Consensus 204 ~G~~D~~V~~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~ 245 (302)
T d1thta_ 204 TANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLV 245 (302)
T ss_dssp EETTCTTSCHHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHH
T ss_pred EeCCCCccCHHHHHHHHHhCCCCCceEEEecCCCcccc-cChH
Confidence 99999999999999999999866899999999999865 4454
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=2.6e-31 Score=204.26 Aligned_cols=227 Identities=17% Similarity=0.201 Sum_probs=150.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHH---HHHhCCCcEEEEE
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATG---LAKLGVDKCVLVG 136 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~---l~~~~~~~~~lvG 136 (320)
+++++|||+||+++++. .|..+++.|+++ |+|+++|+||||.|..........+...++..+ ++..+.++++++|
T Consensus 9 ~~~~~vvliHG~~~~~~-~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 87 (242)
T d1tqha_ 9 AGERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAG 87 (242)
T ss_dssp CSSCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred CCCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhcccCceEEEE
Confidence 35678999999999999 999999999987 999999999999997655555555555554444 4556778999999
Q ss_pred eChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHH
Q 020916 137 FSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYK 216 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (320)
||+||.+++.++.++|. ..+++++++.......... ............. .........
T Consensus 88 ~S~Gg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~-~~~~~~~~~ 145 (242)
T d1tqha_ 88 LSLGGVFSLKLGYTVPI--EGIVTMCAPMYIKSEETMY-------------------EGVLEYAREYKKR-EGKSEEQIE 145 (242)
T ss_dssp ETHHHHHHHHHHTTSCC--SCEEEESCCSSCCCHHHHH-------------------HHHHHHHHHHHHH-HTCCHHHHH
T ss_pred cchHHHHhhhhcccCcc--cccccccccccccchhHHH-------------------HHHHHHHHHHhhh-ccchhhhHH
Confidence 99999999999999885 4566666554322111000 0000000000000 000011111
Q ss_pred HHHHHHhcC-hhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC
Q 020916 217 DFLEVMFAN-RKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE 295 (320)
Q Consensus 217 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 295 (320)
......... ........... ......+..+++|+|+++|++|..++++..+.+.+.+...++++++++++||+++.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 223 (242)
T d1tqha_ 146 QEMEKFKQTPMKTLKALQELI--ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLD 223 (242)
T ss_dssp HHHHHHTTSCCTTHHHHHHHH--HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSGGGS
T ss_pred HHHhhhhhhccchhhcccccc--cccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCcCccc
Confidence 111111100 00000000000 001124567889999999999999999999999999864579999999999999987
Q ss_pred -ChHHHHHHHHHHHHhhh
Q 020916 296 -RPCAYNRCLKQFLASLH 312 (320)
Q Consensus 296 -~~~~~~~~i~~fl~~~~ 312 (320)
+++++.+.|.+||+++.
T Consensus 224 ~~~~~~~~~i~~Fl~~l~ 241 (242)
T d1tqha_ 224 QEKDQLHEDIYAFLESLD 241 (242)
T ss_dssp TTHHHHHHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHHHHhCC
Confidence 58999999999999863
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.96 E-value=1.3e-27 Score=193.78 Aligned_cols=236 Identities=14% Similarity=0.082 Sum_probs=159.3
Q ss_pred cCCCceEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEec
Q 020916 19 AGVQPHAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIP 96 (320)
Q Consensus 19 ~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~ 96 (320)
.+...+.|+++ ||.+|.++...+.. .++.|+||++||+.++.. .|..+.+.|.++ |.|+++
T Consensus 102 ~~~~~e~v~ip~dg~~l~g~l~~P~~----------------~~~~P~Vi~~hG~~~~~e-~~~~~~~~l~~~G~~vl~~ 164 (360)
T d2jbwa1 102 LSPPAERHELVVDGIPMPVYVRIPEG----------------PGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATF 164 (360)
T ss_dssp SSSCEEEEEEEETTEEEEEEEECCSS----------------SCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEE
T ss_pred CCCCeEEeecCcCCcccceEEEecCC----------------CCCceEEEEeCCCCccHH-HHHHHHHHHHhcCCEEEEE
Confidence 34444445444 79999987766532 246789999999998888 777888888887 999999
Q ss_pred CCCCCCCCCCCCC-CCChhHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc
Q 020916 97 DLLFFGGSITDEA-DRSPTFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172 (320)
Q Consensus 97 d~~G~G~s~~~~~-~~~~~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 172 (320)
|+||||.|..... ....+..+..+.+++... +.+++.|+||||||.+++.+|...| +|+++|.+++.........
T Consensus 165 D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~ 243 (360)
T d2jbwa1 165 DGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDL 243 (360)
T ss_dssp CCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGG
T ss_pred ccccccccCccccccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhh
Confidence 9999999975443 244555555666665544 3467999999999999999999887 6999998887543211100
Q ss_pred ccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcE
Q 020916 173 ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRV 252 (320)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 252 (320)
. .......+.... .... .... .............+.+++||+
T Consensus 244 ~-------------------~~~~~~~~~~~~----~~~~--~~~~-------------~~~~~~~~~~~~~~~~i~~P~ 285 (360)
T d2jbwa1 244 E-------------------TPLTKESWKYVS----KVDT--LEEA-------------RLHVHAALETRDVLSQIACPT 285 (360)
T ss_dssp S-------------------CHHHHHHHHHHT----TCSS--HHHH-------------HHHHHHHTCCTTTGGGCCSCE
T ss_pred h-------------------hhhhhHHHHHhc----cCCc--hHHH-------------HHHHHhhcchhhhHhhCCCCE
Confidence 0 000000000000 0000 0000 000111123334577899999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
|+++|++|. +|.+..+.+.+.++..+.+++++++++|.. .+.+.+....|.+||.+.-
T Consensus 286 Lii~G~~D~-vp~~~~~~l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~~L 343 (360)
T d2jbwa1 286 YILHGVHDE-VPLSFVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVL 343 (360)
T ss_dssp EEEEETTSS-SCTHHHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHH
T ss_pred EEEEeCCCC-cCHHHHHHHHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHHHHHHHHHh
Confidence 999999998 588999999999875567888889999965 4556778888999998754
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.1e-30 Score=201.49 Aligned_cols=101 Identities=17% Similarity=0.160 Sum_probs=91.4
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhcc---ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeCh
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK---YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSY 139 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~---~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~ 139 (320)
.+||||+||+++++. .|..+++.|.+. |+|+++|+||||.|..+. .++.+.+++++.++++.++ ++++|+||||
T Consensus 2 ~~PvvllHG~~~~~~-~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~-~~~~~~~~~~l~~~l~~l~-~~~~lvGhS~ 78 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPL-WEQVQGFREAVVPIMAKAP-QGVHLICYSQ 78 (268)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH-HHHHHHHHHHHHHHHHHCT-TCEEEEEETH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCcc-ccCHHHHHHHHHHHHhccC-CeEEEEcccc
Confidence 567899999999999 999999999874 899999999999998653 4678889999999999998 8999999999
Q ss_pred hHHHHHHHHHhCcc-ccccEEEeccccc
Q 020916 140 GGMVSFKVAELYPN-LVQAMVVSGSILA 166 (320)
Q Consensus 140 Gg~~a~~~a~~~p~-~v~~lvl~~~~~~ 166 (320)
||.+|+.+|.++|+ +|+++|+++++..
T Consensus 79 GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 79 GGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred HHHHHHHHHHHCCccccceEEEECCCCc
Confidence 99999999999998 6999999997643
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.95 E-value=4.7e-26 Score=169.49 Aligned_cols=172 Identities=16% Similarity=0.160 Sum_probs=130.4
Q ss_pred CCCeEEEEcCC---CCC--ccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----CCCc
Q 020916 62 SKPVVVLVHGF---AAE--GIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----GVDK 131 (320)
Q Consensus 62 ~~~~vv~lhG~---~~~--~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----~~~~ 131 (320)
..+++|++|+. +++ .. .+..+++.|.+. |.|+.+|+||+|.|...... .....+|+.++++.+ ..++
T Consensus 34 ~~~~~vl~Hph~~~GG~~~~~-~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~--~~~~~~D~~a~~~~~~~~~~~~~ 110 (218)
T d2fuka1 34 QPVTAIVCHPLSTEGGSMHNK-VVTMAARALRELGITVVRFNFRSVGTSAGSFDH--GDGEQDDLRAVAEWVRAQRPTDT 110 (218)
T ss_dssp CSEEEEEECSCTTTTCSTTCH-HHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCT--TTHHHHHHHHHHHHHHHHCTTSE
T ss_pred CCcEEEEECCCCCCCcCCCCh-HHHHHHHHHHHcCCeEEEeecCCCccCCCccCc--CcchHHHHHHHHHHHhhcccCce
Confidence 34567888843 232 23 467788999988 99999999999999875432 334566666666544 5678
Q ss_pred EEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCC
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFP 211 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (320)
++++||||||.+++.+|.+. .++++|+++++....
T Consensus 111 v~l~G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~------------------------------------------- 145 (218)
T d2fuka1 111 LWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW------------------------------------------- 145 (218)
T ss_dssp EEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-------------------------------------------
T ss_pred EEEEEEcccchhhhhhhccc--ccceEEEeCCcccch-------------------------------------------
Confidence 99999999999999998864 488999998753100
Q ss_pred chhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcc
Q 020916 212 SCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHL 291 (320)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 291 (320)
+.....+.+|+|+|+|++|.++|.+..+.+.+.++ ...++++++|++|+
T Consensus 146 ------------------------------~~~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~-~~~~l~~i~ga~H~ 194 (218)
T d2fuka1 146 ------------------------------DFSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLE-QQPTLVRMPDTSHF 194 (218)
T ss_dssp ------------------------------CCTTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCS-SCCEEEEETTCCTT
T ss_pred ------------------------------hhhccccccceeeEecCCCcCcCHHHHHHHHHHcc-CCceEEEeCCCCCC
Confidence 00112356899999999999999999999998877 56789999999997
Q ss_pred cccCChHHHHHHHHHHHHhhhh
Q 020916 292 VHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 292 ~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
+. .+.+++.+.+.+|+++...
T Consensus 195 f~-~~~~~l~~~~~~~v~~~l~ 215 (218)
T d2fuka1 195 FH-RKLIDLRGALQHGVRRWLP 215 (218)
T ss_dssp CT-TCHHHHHHHHHHHHGGGCS
T ss_pred CC-CCHHHHHHHHHHHHHHhcC
Confidence 54 4556799999999988654
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.94 E-value=1.1e-26 Score=182.13 Aligned_cols=214 Identities=13% Similarity=0.032 Sum_probs=145.5
Q ss_pred CCCCeEEEEcCC--CCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCC---CChhHHHHHHHH-HHHHhCCCcEEE
Q 020916 61 PSKPVVVLVHGF--AAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEAD---RSPTFQAQCLAT-GLAKLGVDKCVL 134 (320)
Q Consensus 61 ~~~~~vv~lhG~--~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~---~~~~~~~~~l~~-~l~~~~~~~~~l 134 (320)
+.+|+++|+||+ +++.. .|..+++.|...++|+++|+||||.|...... .+++.+++++.+ +++..+.++++|
T Consensus 58 ~~~~~l~c~~~~~~~g~~~-~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~P~vL 136 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPH-EFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVL 136 (283)
T ss_dssp CCCCEEEEECCCCTTCSTT-TTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEE
T ss_pred CCCceEEEeCCCCCCCCHH-HHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcCCCceEE
Confidence 467899999985 45666 89999999999999999999999998765432 578888888765 557777889999
Q ss_pred EEeChhHHHHHHHHHhCc----cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 135 VGFSYGGMVSFKVAELYP----NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 135 vGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+||||||.+|+++|.+.+ ++|.++|++++............. ......... ......
T Consensus 137 ~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~-----------------~~~~~~~~~--~~~~~~ 197 (283)
T d2h7xa1 137 LGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWS-----------------RQLGEGLFA--GELEPM 197 (283)
T ss_dssp EEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTH-----------------HHHHHHHHH--TCSSCC
T ss_pred EEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhh-----------------hhhHHHhhc--cccccc
Confidence 999999999999998754 479999999986543221110000 000000000 000111
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCc
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGH 290 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 290 (320)
......... .....+ .......+++|+++|+|++|..++.+....+.+.++ ...+++.++| +|
T Consensus 198 ~~~~l~a~~-----------~~~~~~----~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~-~~~~~~~v~G-~H 260 (283)
T d2h7xa1 198 SDARLLAMG-----------RYARFL----AGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWD-LPHTVADVPG-DH 260 (283)
T ss_dssp CHHHHHHHH-----------HHHHHH----HSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCS-SCSEEEEESS-CT
T ss_pred ccHHHHHHH-----------HHHHHH----hhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCC-CCcEEEEEcC-CC
Confidence 111111100 001111 112346789999999999999998877766666665 4578999997 89
Q ss_pred cccc-CChHHHHHHHHHHHHhh
Q 020916 291 LVHL-ERPCAYNRCLKQFLASL 311 (320)
Q Consensus 291 ~~~~-~~~~~~~~~i~~fl~~~ 311 (320)
+.++ ++++.+++.|.+||+++
T Consensus 261 ~~ml~e~~~~vA~~i~~~L~~l 282 (283)
T d2h7xa1 261 FTMMRDHAPAVAEAVLSWLDAI 282 (283)
T ss_dssp THHHHTTHHHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHHHhc
Confidence 8654 68999999999999976
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=3.2e-25 Score=169.16 Aligned_cols=212 Identities=13% Similarity=0.027 Sum_probs=131.7
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-CCCcEEEEEeC
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-GVDKCVLVGFS 138 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvGhS 138 (320)
.+++++|||+||++++.. .|..+++.|+ .|.|+++|++|+|. .++++.+.++.+ ..++++|+|||
T Consensus 14 ~~~~~~l~~lhg~~g~~~-~~~~la~~L~-~~~v~~~~~~g~~~------------~a~~~~~~i~~~~~~~~~~lvGhS 79 (230)
T d1jmkc_ 14 QDQEQIIFAFPPVLGYGL-MYQNLSSRLP-SYKLCAFDFIEEED------------RLDRYADLIQKLQPEGPLTLFGYS 79 (230)
T ss_dssp TTCSEEEEEECCTTCCGG-GGHHHHHHCT-TEEEEEECCCCSTT------------HHHHHHHHHHHHCCSSCEEEEEET
T ss_pred CCCCCeEEEEcCCCCCHH-HHHHHHHHCC-CCEEeccCcCCHHH------------HHHHHHHHHHHhCCCCcEEEEeec
Confidence 357889999999999999 9999999996 49999999999864 345555555554 45789999999
Q ss_pred hhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHH
Q 020916 139 YGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDF 218 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (320)
|||.+|+.+|.++|+++..++.+............... ..........+.. ..........+.....
T Consensus 80 ~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 146 (230)
T d1jmkc_ 80 AGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLD---------GRTVESDVEALMN----VNRDNEALNSEAVKHG 146 (230)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC-----------------CCHHHHHH----HTTTCSGGGSHHHHHH
T ss_pred cChHHHHHHHHhhhhhCccceeeecccccCccchhhhh---------hhhhhhhhhhhhh----ccccccccccHHHHHH
Confidence 99999999999988776665544332221111100000 0000011111111 1111111111111111
Q ss_pred HHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCCh-
Q 020916 219 LEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERP- 297 (320)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~- 297 (320)
..... ....... ........+++|+++|+|++|..++.. ...+.+... .+.+++++++ ||+.+++.|
T Consensus 147 ~~~~~------~~~~~~~---~~~~~~~~i~~p~l~i~g~~D~~~~~~-~~~w~~~~~-~~~~~~~i~g-~H~~ml~~~~ 214 (230)
T d1jmkc_ 147 LKQKT------HAFYSYY---VNLISTGQVKADIDLLTSGADFDIPEW-LASWEEATT-GAYRMKRGFG-THAEMLQGET 214 (230)
T ss_dssp HHHHH------HHHHHHH---HHCCCCSCBSSEEEEEECSSCCCCCTT-EECSGGGBS-SCEEEEECSS-CGGGTTSHHH
T ss_pred HHHHH------HHHHHhh---hcccccccccCcceeeeecCCcccchh-HHHHHHhcc-CCcEEEEEcC-CChhhcCCcc
Confidence 11110 0111111 112345678999999999999998854 333445544 4788999985 999998866
Q ss_pred -HHHHHHHHHHHHh
Q 020916 298 -CAYNRCLKQFLAS 310 (320)
Q Consensus 298 -~~~~~~i~~fl~~ 310 (320)
+++++.|.+||++
T Consensus 215 ~~~va~~I~~~L~~ 228 (230)
T d1jmkc_ 215 LDRNAGILLEFLNT 228 (230)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhh
Confidence 8999999999975
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=5.3e-25 Score=162.24 Aligned_cols=180 Identities=13% Similarity=0.103 Sum_probs=123.6
Q ss_pred CeEEEEcCCCCCccc-cHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 64 PVVVLVHGFAAEGIV-TWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 64 ~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
..||++||++++... .+..+++.|.+. |+|+++|+||+|.+ ..+++++.+...++..+ .+++|+||||||
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~-------~~~~~~~~l~~~~~~~~-~~~~lvGhS~Gg 73 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP-------RLEDWLDTLSLYQHTLH-ENTYLVAHSLGC 73 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC-------CHHHHHHHHHTTGGGCC-TTEEEEEETTHH
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc-------hHHHHHHHHHHHHhccC-CCcEEEEechhh
Confidence 469999999988651 267788999888 99999999999865 35566666666555444 689999999999
Q ss_pred HHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHH
Q 020916 142 MVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEV 221 (320)
Q Consensus 142 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (320)
.+++.++.++|+.....+++................. ....... ..
T Consensus 74 ~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~---~~----- 119 (186)
T d1uxoa_ 74 PAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDE--------------------------FTQGSFD---HQ----- 119 (186)
T ss_dssp HHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGGGG--------------------------GTCSCCC---HH-----
T ss_pred HHHHHHHHhCCccceeeEEeecccccccchhhhhhhh--------------------------hhccccc---cc-----
Confidence 9999999999875443333332221110000000000 0000000 00
Q ss_pred HhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccC---ChH
Q 020916 222 MFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLE---RPC 298 (320)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~~~ 298 (320)
....+.+|+++|+|++|+++|++..+.+++.+ ++++++++++||+...+ .-.
T Consensus 120 ----------------------~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~---~~~~~~~~~~gH~~~~~~~~~~~ 174 (186)
T d1uxoa_ 120 ----------------------KIIESAKHRAVIASKDDQIVPFSFSKDLAQQI---DAALYEVQHGGHFLEDEGFTSLP 174 (186)
T ss_dssp ----------------------HHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT---TCEEEEETTCTTSCGGGTCSCCH
T ss_pred ----------------------ccccCCCCEEEEecCCCCCCCHHHHHHHHHHc---CCEEEEeCCCCCcCccccCcccH
Confidence 00123579999999999999999999999987 57899999999987654 235
Q ss_pred HHHHHHHHHHHh
Q 020916 299 AYNRCLKQFLAS 310 (320)
Q Consensus 299 ~~~~~i~~fl~~ 310 (320)
++.+.|.+|+.+
T Consensus 175 ~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 175 IVYDVLTSYFSK 186 (186)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHcC
Confidence 688899999864
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=1.6e-24 Score=173.49 Aligned_cols=228 Identities=14% Similarity=0.058 Sum_probs=140.6
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCC
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITD 107 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~ 107 (320)
.||.+|+.+...+. +.++.|+||++||++++.. .|...+..|+++ |.|+++|+||||.|...
T Consensus 64 ~dg~~i~~~l~~P~----------------~~~~~P~vv~~HG~~~~~~-~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~ 126 (318)
T d1l7aa_ 64 FGNARITGWYAVPD----------------KEGPHPAIVKYHGYNASYD-GEIHEMVNWALHGYATFGMLVRGQQRSEDT 126 (318)
T ss_dssp GGGEEEEEEEEEES----------------SCSCEEEEEEECCTTCCSG-GGHHHHHHHHHTTCEEEEECCTTTSSSCCC
T ss_pred CCCcEEEEEEEecC----------------CCCCceEEEEecCCCCCcc-chHHHHHHHHHCCCEEEEEeeCCCCCCCCC
Confidence 46777776655442 2346789999999999999 899999999888 99999999999999765
Q ss_pred CCCCC------------------hhHHHHHHHHHHHHh---C---CCcEEEEEeChhHHHHHHHHHhCccccccEEEecc
Q 020916 108 EADRS------------------PTFQAQCLATGLAKL---G---VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGS 163 (320)
Q Consensus 108 ~~~~~------------------~~~~~~~l~~~l~~~---~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 163 (320)
..... ......+....++.+ . ..++.++|+|+||..++..+...+. +.+++...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~ 205 (318)
T d1l7aa_ 127 SISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYP 205 (318)
T ss_dssp CCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESC
T ss_pred cccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEecc
Confidence 42211 112233433333333 2 2468999999999999999998864 666665554
Q ss_pred cccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCC
Q 020916 164 ILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDP 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (320)
......... ... ... .......+.... ....................
T Consensus 206 ~~~~~~~~~----~~~---------~~~-------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 252 (318)
T d1l7aa_ 206 YLSNFERAI----DVA---------LEQ-------------------PYLEINSFFRRN-GSPETEVQAMKTLSYFDIMN 252 (318)
T ss_dssp CSCCHHHHH----HHC---------CST-------------------TTTHHHHHHHHS-CCHHHHHHHHHHHHTTCHHH
T ss_pred ccccHHHHh----hcc---------ccc-------------------ccchhhhhhhcc-cccccccccccccccccccc
Confidence 321110000 000 000 000000000000 00000000000000011112
Q ss_pred CCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhh
Q 020916 244 TVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 244 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
.++++++|+|+++|++|.++|++.+..+.+.++ .++++++++++||... +++.+.+.+||+++-
T Consensus 253 ~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~-~~~~l~~~~~~gH~~~----~~~~~~~~~fl~~~L 316 (318)
T d1l7aa_ 253 LADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLE-TKKELKVYRYFGHEYI----PAFQTEKLAFFKQIL 316 (318)
T ss_dssp HGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCC-SSEEEEEETTCCSSCC----HHHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEEECCCCCcCHHHHHHHHHHcC-CCcEEEEECCCCCCCc----HHHHHHHHHHHHHhC
Confidence 245788999999999999999999999999987 5789999999999754 456666667776643
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.3e-24 Score=170.85 Aligned_cols=96 Identities=16% Similarity=0.113 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHH-HHHhCCCcEEEEEeCh
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATG-LAKLGVDKCVLVGFSY 139 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~-l~~~~~~~~~lvGhS~ 139 (320)
+++++|||+||+++++. .|+.+++.| .++|+++|+||+|.|. +++++++++.+. .+..+.++++|+||||
T Consensus 23 ~~~~Pl~l~Hg~~gs~~-~~~~l~~~L--~~~v~~~d~~g~~~~~------~~~~~a~~~~~~~~~~~~~~~~~lvGhS~ 93 (286)
T d1xkta_ 23 SSERPLFLVHPIEGSTT-VFHSLASRL--SIPTYGLQCTRAAPLD------SIHSLAAYYIDCIRQVQPEGPYRVAGYSY 93 (286)
T ss_dssp CCSCCEEEECCTTCCCG-GGHHHHHTC--SSCEEEECCCTTSCCS------CHHHHHHHHHHHHHHHCCSSCCEEEEETH
T ss_pred CCCCeEEEECCCCccHH-HHHHHHHHc--CCeEEEEeCCCCCCCC------CHHHHHHHHHHHHHHhcCCCceEEeecCC
Confidence 46778999999999999 999999988 4889999999999876 567777776554 4555678999999999
Q ss_pred hHHHHHHHHHhCccccccEEEecccc
Q 020916 140 GGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 140 Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
||.+|+.+|.++|+++.++++++...
T Consensus 94 Gg~vA~~~A~~~p~~~~~v~~l~~~~ 119 (286)
T d1xkta_ 94 GACVAFEMCSQLQAQQSPAPTHNSLF 119 (286)
T ss_dssp HHHHHHHHHHHHHHC------CCEEE
T ss_pred ccHHHHHHHHHHHHcCCCceeEEEee
Confidence 99999999999999999988776544
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.2e-24 Score=158.66 Aligned_cols=171 Identities=20% Similarity=0.157 Sum_probs=135.5
Q ss_pred CCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhH
Q 020916 63 KPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGG 141 (320)
Q Consensus 63 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg 141 (320)
++||||+||++++.. .|..+++.|.++ |.++.+|.+|++.+.... ....+.+++++.+++++++.++++|+||||||
T Consensus 2 ~~PVv~vHG~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG 79 (179)
T d1ispa_ 2 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTN-YNNGPVLSRFVQKVLDETGAKKVDIVAHSMGG 79 (179)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCH-HHHHHHHHHHHHHHHHHHCCSCEEEEEETHHH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHHcCCeEEEEecCCcccccccc-chhhhhHHHHHHHHHHhcCCceEEEEeecCcC
Confidence 467999999999999 999999999998 999999999999886432 23455677788888888899999999999999
Q ss_pred HHHHHHHHhC--ccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHH
Q 020916 142 MVSFKVAELY--PNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFL 219 (320)
Q Consensus 142 ~~a~~~a~~~--p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (320)
.++..++.++ |++|+++|+++++.......
T Consensus 80 ~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~------------------------------------------------ 111 (179)
T d1ispa_ 80 ANTLYYIKNLDGGNKVANVVTLGGANRLTTGK------------------------------------------------ 111 (179)
T ss_dssp HHHHHHHHHSSGGGTEEEEEEESCCGGGTCSB------------------------------------------------
T ss_pred HHHHHHHHHcCCchhhCEEEEECCCCCCchhh------------------------------------------------
Confidence 9999999887 67899999998764221100
Q ss_pred HHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHH
Q 020916 220 EVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCA 299 (320)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 299 (320)
..........+|++.|+|..|.++++..+ .++ ..+.+.+++.+|.....+| +
T Consensus 112 --------------------~l~~~~~~~~~~~~~i~~~~D~~v~~~~~-----~l~--~~~~~~~~~~~H~~l~~~~-~ 163 (179)
T d1ispa_ 112 --------------------ALPGTDPNQKILYTSIYSSADMIVMNYLS-----RLD--GARNVQIHGVGHIGLLYSS-Q 163 (179)
T ss_dssp --------------------CCCCSCTTCCCEEEEEEETTCSSSCHHHH-----CCB--TSEEEEESSCCTGGGGGCH-H
T ss_pred --------------------hcCCcccccCceEEEEEecCCcccCchhh-----cCC--CceEEEECCCCchhhccCH-H
Confidence 00001123357899999999999998643 455 7888999999999888888 5
Q ss_pred HHHHHHHHHHhh
Q 020916 300 YNRCLKQFLASL 311 (320)
Q Consensus 300 ~~~~i~~fl~~~ 311 (320)
+.+.|.+||+.-
T Consensus 164 v~~~i~~~L~~~ 175 (179)
T d1ispa_ 164 VNSLIKEGLNGG 175 (179)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHhcc
Confidence 888999998753
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.92 E-value=3e-24 Score=164.62 Aligned_cols=215 Identities=12% Similarity=0.023 Sum_probs=136.3
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCC
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~ 99 (320)
++.+.+++ .|..+.+..+.. ++|+||++||++++.. .|..+++.|++. |.|+++|+|
T Consensus 3 ~~~~~~~l-~g~~~~~~~p~~--------------------~~~~vl~lHG~~~~~~-~~~~~~~~la~~G~~V~~~D~~ 60 (238)
T d1ufoa_ 3 VRTERLTL-AGLSVLARIPEA--------------------PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAP 60 (238)
T ss_dssp EEEEEEEE-TTEEEEEEEESS--------------------CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCT
T ss_pred EEEEEEEE-CCEEEEecCCCC--------------------CCeEEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEEecCC
Confidence 34566777 587777766653 6899999999999998 999999999988 999999999
Q ss_pred CCCCCCCCCCCCCh----hHH-------HHHHHHHHH---HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 100 FFGGSITDEADRSP----TFQ-------AQCLATGLA---KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 100 G~G~s~~~~~~~~~----~~~-------~~~l~~~l~---~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
|||.|......... ... .+++..++. .....++.++|+|+||.+++.++..+|+ +.+++.+.+..
T Consensus 61 g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~ 139 (238)
T d1ufoa_ 61 RHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSG 139 (238)
T ss_dssp TSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCS
T ss_pred CCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeec
Confidence 99999865533221 111 112222221 2234689999999999999999999886 55555443332
Q ss_pred cccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCC
Q 020916 166 AMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTV 245 (320)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (320)
....... ...... . .......... .....
T Consensus 140 ~~~~~~~--------------~~~~~~-------------------~----~~~~~~~~~~--------------~~~~~ 168 (238)
T d1ufoa_ 140 FPMKLPQ--------------GQVVED-------------------P----GVLALYQAPP--------------ATRGE 168 (238)
T ss_dssp SCCCCCT--------------TCCCCC-------------------H----HHHHHHHSCG--------------GGCGG
T ss_pred ccccccc--------------cccccc-------------------c----cccchhhhhh--------------hhhhh
Confidence 1111000 000000 0 0000000000 00011
Q ss_pred CCCCCcEEEEecCCCCCCCHHHHHHHHHHhC----CCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 246 PNFPQRVHLLWGEDDQIFNVELAHNMKEQLG----ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 246 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
...++|+++++|++|.++|.+....+.+.+. ..+++++.++|+||....+..+...+.+.+||+
T Consensus 169 ~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 169 AYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp GGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred hhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 2335799999999999999999988888764 235788899999998754333344444444443
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.92 E-value=2.3e-24 Score=172.28 Aligned_cols=262 Identities=14% Similarity=0.123 Sum_probs=169.1
Q ss_pred CceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccHHHHH---HHhhcc-ceEEecCCCCCCCC
Q 020916 31 GTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTWQFQV---GALTKK-YSVYIPDLLFFGGS 104 (320)
Q Consensus 31 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~~~~~---~~l~~~-~~vi~~d~~G~G~s 104 (320)
+.+|.|..+|.... ...++||++|++.+++. ..|..++ ..|... |-||++|..|.|.+
T Consensus 28 ~~~laY~t~G~ln~----------------~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~g 91 (376)
T d2vata1 28 DVPVAYKSWGRMNV----------------SRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFG 91 (376)
T ss_dssp EEEEEEEEESCCCT----------------TSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSS
T ss_pred CceEEEEeecccCC----------------CCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcC
Confidence 35677888886322 35678999999988775 2445554 345545 99999999987754
Q ss_pred CCCC-----------------CCCChhHHHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 105 ITDE-----------------ADRSPTFQAQCLATGLAKLGVDKC-VLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 105 ~~~~-----------------~~~~~~~~~~~l~~~l~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+.+. +..++.++++....++++|+++++ .++|.||||+.|+++|..+|++|+++|.+++...
T Consensus 92 st~p~s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~ 171 (376)
T d2vata1 92 SAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCR 171 (376)
T ss_dssp SSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSB
T ss_pred CCCCCCCCcccccCCcccccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccc
Confidence 3211 125788899999999999999997 5779999999999999999999999999998875
Q ss_pred ccccccccc--cc-ccc-cccccc--cc-CcCcHHHH--HHHHhHhhhcc------------------------------
Q 020916 167 MTDSINETN--LN-RLG-VSSSSE--LL-LPNSVKGL--KALLSVATYKK------------------------------ 207 (320)
Q Consensus 167 ~~~~~~~~~--~~-~~~-~~~~~~--~~-~~~~~~~~--~~~~~~~~~~~------------------------------ 207 (320)
......... .. .+. ...+.. +. .......+ .+.+....+..
T Consensus 172 ~s~~~~a~~~~~~~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~ 251 (376)
T d2vata1 172 QSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEIN 251 (376)
T ss_dssp CCHHHHHHHHHHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------
T ss_pred cchHHHHHHHHHHHHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhccc
Confidence 433211100 00 000 000000 00 00000111 11111111100
Q ss_pred ---------ccCCchhHHHHHHHHh------cChhhHHHHhhhhhccCCC--------CCCCCCCCcEEEEecCCCCCCC
Q 020916 208 ---------LWFPSCLYKDFLEVMF------ANRKERAELLEGLLISNKD--------PTVPNFPQRVHLLWGEDDQIFN 264 (320)
Q Consensus 208 ---------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~P~l~i~g~~D~~~~ 264 (320)
...+....+.|+.... .+......+...+...+.. ..+..|++|+|+|.++.|.++|
T Consensus 252 ~~~~~~~~~~~~~~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFP 331 (376)
T d2vata1 252 GTDSGNSHRAGQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYS 331 (376)
T ss_dssp ------------CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSC
T ss_pred ccccccccccccchhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcC
Confidence 0001112333333221 1223333444444444433 2378899999999999999999
Q ss_pred HHHHHHHHHHhCCCCeEEEEec-CCCcccccCChHHHHHHHHHHHHh
Q 020916 265 VELAHNMKEQLGADHVTFQGIK-KAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++..+.+++.++ ++++.+++ ..||..++-+++.+.+.|.+||++
T Consensus 332 p~~~~e~a~~l~--~a~~~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 332 FDEHVEMGRSIP--NSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp HHHHHHHHHHST--TEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcC--CCeEEEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 999999999998 99999998 679988877899999999999974
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.92 E-value=2.1e-24 Score=167.58 Aligned_cols=235 Identities=18% Similarity=0.221 Sum_probs=154.5
Q ss_pred cCCCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC--CCccccHHHHHHHhhcc-ceEEe
Q 020916 19 AGVQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA--AEGIVTWQFQVGALTKK-YSVYI 95 (320)
Q Consensus 19 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~--~~~~~~~~~~~~~l~~~-~~vi~ 95 (320)
...+..++...||.+|.++.+.++.. +++.|+||++||.+ .... .|...+..|+++ |.|++
T Consensus 10 ~~~~~v~~~s~dG~~i~~~l~~p~~~---------------~~~~Pviv~~HGG~~~~~~~-~~~~~~~~la~~G~~v~~ 73 (260)
T d2hu7a2 10 AGSRLVWVESFDGSRVPTYVLESGRA---------------PTPGPTVVLVHGGPFAEDSD-SWDTFAASLAAAGFHVVM 73 (260)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTS---------------CSSEEEEEEECSSSSCCCCS-SCCHHHHHHHHHTCEEEE
T ss_pred CceEEEEEECCCCCEEEEEEEeCCCC---------------CCCceEEEEECCCCccCCCc-cccHHHHHHHhhcccccc
Confidence 34445567777999999987665321 13567999999843 3344 677788888888 99999
Q ss_pred cCCCCCCCCCCCC---CC-CChhHHHHHHHHHHHHh----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 96 PDLLFFGGSITDE---AD-RSPTFQAQCLATGLAKL----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 96 ~d~~G~G~s~~~~---~~-~~~~~~~~~l~~~l~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
+|+||++.+.... .. .......+|+.++++.+ ...++.++|+|+||.+++.++..+|+.+++++..++....
T Consensus 74 ~d~r~~~~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~ 153 (260)
T d2hu7a2 74 PNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW 153 (260)
T ss_dssp ECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCH
T ss_pred ceeeeccccccccccccccccchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhh
Confidence 9999987764321 11 11122344555544433 3467899999999999999999999999998888776532
Q ss_pred cccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCC
Q 020916 168 TDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPN 247 (320)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (320)
..... . .......+........... + ........+.+
T Consensus 154 ~~~~~------------------~-------------------~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~ 190 (260)
T d2hu7a2 154 EEMYE------------------L-------------------SDAAFRNFIEQLTGGSREI---M---RSRSPINHVDR 190 (260)
T ss_dssp HHHHH------------------T-------------------CCHHHHHHHHHHHCSCHHH---H---HHTCGGGCGGG
T ss_pred hhhhc------------------c-------------------ccccccccccccccccccc---c---cccchhhcccc
Confidence 11000 0 0000111111111111100 0 01112234567
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHHHhhh
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 312 (320)
+++|+|+++|++|..+|.+.+..+.+.+. +..+++++++|+||.+.. ++...+.+.+.+||.+..
T Consensus 191 ~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~hl 258 (260)
T d2hu7a2 191 IKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQR 258 (260)
T ss_dssp CCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHHHh
Confidence 88999999999999999999998887764 346799999999998653 666788888899998764
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.91 E-value=4.7e-23 Score=163.55 Aligned_cols=265 Identities=17% Similarity=0.188 Sum_probs=172.1
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc--------cHHHHH---HHhhcc-ceEEecC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV--------TWQFQV---GALTKK-YSVYIPD 97 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~--------~~~~~~---~~l~~~-~~vi~~d 97 (320)
+..+|.|..+|.... ...++||++|++.+++.. .|..++ ..|... |.||++|
T Consensus 22 ~~~~laY~t~G~ln~----------------~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n 85 (357)
T d2b61a1 22 SYINVAYQTYGTLND----------------EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSN 85 (357)
T ss_dssp CSEEEEEEEESCCCT----------------TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEEC
T ss_pred CCceEEEEeecccCC----------------CCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEec
Confidence 356788988886322 245899999999887651 245554 345545 9999999
Q ss_pred CCCCCCCCCCC---------------CCCChhHHHHHHHHHHHHhCCCcE-EEEEeChhHHHHHHHHHhCccccccEEEe
Q 020916 98 LLFFGGSITDE---------------ADRSPTFQAQCLATGLAKLGVDKC-VLVGFSYGGMVSFKVAELYPNLVQAMVVS 161 (320)
Q Consensus 98 ~~G~G~s~~~~---------------~~~~~~~~~~~l~~~l~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 161 (320)
..|.|.++.++ +..++.++++....++++++++++ .++|.||||+.|+++|.++|++|+++|.+
T Consensus 86 ~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i 165 (357)
T d2b61a1 86 VLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNL 165 (357)
T ss_dssp CTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred ccCCccccCCcCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhccc
Confidence 99976543221 236788899999999999999998 66799999999999999999999999999
Q ss_pred cccccccccccccc--cc-ccc-ccccc--cc---cCcCcHHHHHHHHhHhhhcc-----------c------cCCchhH
Q 020916 162 GSILAMTDSINETN--LN-RLG-VSSSS--EL---LLPNSVKGLKALLSVATYKK-----------L------WFPSCLY 215 (320)
Q Consensus 162 ~~~~~~~~~~~~~~--~~-~~~-~~~~~--~~---~~~~~~~~~~~~~~~~~~~~-----------~------~~~~~~~ 215 (320)
++............ .. .+. ...+. .+ ..+.......+.+....+.. . +......
T Consensus 166 ~~~a~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~v 245 (357)
T d2b61a1 166 CSSIYFSAEAIGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQV 245 (357)
T ss_dssp SCCSSCCHHHHHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHH
T ss_pred ccccccchhHHHHHHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhH
Confidence 98764433211100 00 000 00000 00 01111111122222211111 0 0111223
Q ss_pred HHHHHHHh------cChhhHHHHhhhhhccCCC-------CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCe
Q 020916 216 KDFLEVMF------ANRKERAELLEGLLISNKD-------PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHV 280 (320)
Q Consensus 216 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~ 280 (320)
+.|++... .+......+...+...+.. ..+.+|++|+|+|..+.|.++|++..+..++.++ ..++
T Consensus 246 esyL~~~g~kf~~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v 325 (357)
T d2b61a1 246 ESYLSYQGKKFLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDL 325 (357)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCe
Confidence 44444321 1333444444555444433 3378899999999999999999999988888886 2357
Q ss_pred EEEEec-CCCcccccCChHHHHHHHHHHHHh
Q 020916 281 TFQGIK-KAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 281 ~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
++++++ ..||..++-+.+++.+.|++||+.
T Consensus 326 ~~~~I~S~~GHdafL~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 326 HFYEFPSDYGHDAFLVDYDQFEKRIRDGLAG 356 (357)
T ss_dssp EEEEECCTTGGGHHHHCHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCccccCcCHHHHHHHHHHHHcc
Confidence 899998 459998887899999999999974
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.91 E-value=1.1e-22 Score=161.74 Aligned_cols=265 Identities=14% Similarity=0.118 Sum_probs=165.3
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc------------ccHHHHH---HHhhcc-ceE
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI------------VTWQFQV---GALTKK-YSV 93 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~------------~~~~~~~---~~l~~~-~~v 93 (320)
+..+|.|..+|.... ...++||++|++.+++. ..|..++ ..|..+ |-|
T Consensus 25 ~~~~l~Y~t~G~ln~----------------~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfV 88 (362)
T d2pl5a1 25 SPVVIAYETYGTLSS----------------SKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFI 88 (362)
T ss_dssp SSEEEEEEEEECCCT----------------TSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEE
T ss_pred CCceEEEEeeeccCC----------------CCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEE
Confidence 346788888886322 24589999999988752 1355554 345555 999
Q ss_pred EecCCCCCCCCCCCC---------------CCCChhHHHHHHHHHHHHhCCCcEE-EEEeChhHHHHHHHHHhCcccccc
Q 020916 94 YIPDLLFFGGSITDE---------------ADRSPTFQAQCLATGLAKLGVDKCV-LVGFSYGGMVSFKVAELYPNLVQA 157 (320)
Q Consensus 94 i~~d~~G~G~s~~~~---------------~~~~~~~~~~~l~~~l~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~ 157 (320)
|++|..|.|.|+.+. +..++.++++....++++++++++. ++|.||||+.|+++|..+|+.|++
T Consensus 89 I~~n~lG~~~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~ 168 (362)
T d2pl5a1 89 ICSNVIGGCKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSN 168 (362)
T ss_dssp EEECCTTCSSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEE
T ss_pred EeeccccCcccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhh
Confidence 999999988765432 1246778888888999999999976 679999999999999999999999
Q ss_pred EEEecccccccccccccc--c-cccc-cccccccc--CcCcHHHH--HHHHhHhhhcc----------ccC------Cch
Q 020916 158 MVVSGSILAMTDSINETN--L-NRLG-VSSSSELL--LPNSVKGL--KALLSVATYKK----------LWF------PSC 213 (320)
Q Consensus 158 lvl~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~~--~~~~~~~~--~~~~~~~~~~~----------~~~------~~~ 213 (320)
+|.+++............ . ..+. ...+.... .......+ .+.+....+.. ... ...
T Consensus 169 ~v~ia~sa~~s~~~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~ 248 (362)
T d2pl5a1 169 CIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDF 248 (362)
T ss_dssp EEEESCCSBCCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTT
T ss_pred hcccccccccCHHHHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhH
Confidence 999998775433211100 0 0000 00000000 00001111 11111111110 000 000
Q ss_pred hHHHHHHHHh------cChhhHHHHhhhhhccCCC------CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCC
Q 020916 214 LYKDFLEVMF------ANRKERAELLEGLLISNKD------PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADH 279 (320)
Q Consensus 214 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~ 279 (320)
..+.++.... .+......+...+...+.. ..+.+|++|+|+|..+.|.++|++..+.+++.++ ..+
T Consensus 249 ~ve~yl~~~g~k~~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~ 328 (362)
T d2pl5a1 249 AVGSYLIYQGESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKR 328 (362)
T ss_dssp TSCGGGGSTTCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCC
Confidence 0001111000 0111222223333333332 2378899999999999999999999999999987 235
Q ss_pred eEEEEec-CCCcccccCChHHHHHHHHHHHHh
Q 020916 280 VTFQGIK-KAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 280 ~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+++++++ ..||..++.+.+++.+.|.+||++
T Consensus 329 v~~~eI~S~~GHdaFL~e~~~~~~~I~~FL~~ 360 (362)
T d2pl5a1 329 VFYVELQSGEGHDSFLLKNPKQIEILKGFLEN 360 (362)
T ss_dssp EEEEEECCCBSSGGGGSCCHHHHHHHHHHHHC
T ss_pred eEEEEeCCCCCcchhccCHHHHHHHHHHHHcC
Confidence 6788887 679999988899999999999974
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=2e-23 Score=139.02 Aligned_cols=99 Identities=20% Similarity=0.182 Sum_probs=85.9
Q ss_pred ceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCC
Q 020916 23 PHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFG 102 (320)
Q Consensus 23 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G 102 (320)
..++++ +|.+|+|...| ++|+|||+||.+ . .| .+.|+++|+|+++|+||||
T Consensus 3 ~~~~~~-~G~~l~y~~~G---------------------~G~pvlllHG~~---~-~w---~~~L~~~yrvi~~DlpG~G 53 (122)
T d2dsta1 3 AGYLHL-YGLNLVFDRVG---------------------KGPPVLLVAEEA---S-RW---PEALPEGYAFYLLDLPGYG 53 (122)
T ss_dssp EEEEEE-TTEEEEEEEEC---------------------CSSEEEEESSSG---G-GC---CSCCCTTSEEEEECCTTST
T ss_pred ceEEEE-CCEEEEEEEEc---------------------CCCcEEEEeccc---c-cc---cccccCCeEEEEEeccccC
Confidence 457888 79999999988 589999999843 2 34 3557778999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCc
Q 020916 103 GSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 103 ~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
.|+.+ .++.+++++++.++++.+++++++++||||||.+++.+++..+
T Consensus 54 ~S~~p--~~s~~~~a~~i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~ 101 (122)
T d2dsta1 54 RTEGP--RMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGL 101 (122)
T ss_dssp TCCCC--CCCHHHHHHHHHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTC
T ss_pred CCCCc--ccccchhHHHHHHHHHHhCCCCcEEEEeCccHHHHHHHHhhcc
Confidence 99754 5899999999999999999999999999999999999998654
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.88 E-value=2.5e-22 Score=160.84 Aligned_cols=226 Identities=13% Similarity=0.042 Sum_probs=133.0
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCC
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITD 107 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~ 107 (320)
.||.+|+.+...+... +++.|+||++||++.+.. .+.... .+.+. |.|+++|+||||.|...
T Consensus 63 ~dG~~l~~~l~~P~~~---------------~~~~P~Vv~~hG~~~~~~-~~~~~~-~~a~~G~~v~~~D~rG~G~s~~~ 125 (322)
T d1vlqa_ 63 YRGQRIKGWLLVPKLE---------------EEKLPCVVQYIGYNGGRG-FPHDWL-FWPSMGYICFVMDTRGQGSGWLK 125 (322)
T ss_dssp GGGCEEEEEEEEECCS---------------CSSEEEEEECCCTTCCCC-CGGGGC-HHHHTTCEEEEECCTTCCCSSSC
T ss_pred CCCcEEEEEEEeccCC---------------CCCccEEEEecCCCCCcC-cHHHHH-HHHhCCCEEEEeeccccCCCCCC
Confidence 4788888776654221 235689999999988776 665444 44555 99999999999998654
Q ss_pred CCC-------------------------CChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccccc
Q 020916 108 EAD-------------------------RSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQ 156 (320)
Q Consensus 108 ~~~-------------------------~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 156 (320)
... ........|....++.+ +..++.++|+|+||.+++..+...+ +++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~ 204 (322)
T d1vlqa_ 126 GDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAK 204 (322)
T ss_dssp CCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCC
T ss_pred ccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-Ccc
Confidence 211 00112234555555444 2246999999999999998888775 588
Q ss_pred cEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhh
Q 020916 157 AMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGL 236 (320)
Q Consensus 157 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (320)
+++...+.......... . ........... +............. .+
T Consensus 205 a~v~~~~~~~~~~~~~~-----~--------~~~~~~~~~~~-------------------~~~~~~~~~~~~~~---~~ 249 (322)
T d1vlqa_ 205 ALLCDVPFLCHFRRAVQ-----L--------VDTHPYAEITN-------------------FLKTHRDKEEIVFR---TL 249 (322)
T ss_dssp EEEEESCCSCCHHHHHH-----H--------CCCTTHHHHHH-------------------HHHHCTTCHHHHHH---HH
T ss_pred EEEEeCCccccHHHHHh-----h--------ccccchhhHHh-------------------hhhcCcchhhhHHH---Hh
Confidence 88766554321100000 0 00000000000 00000000000000 00
Q ss_pred hccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 237 LISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 237 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
...+......++++|+|+++|.+|.++|++.+..+.+.++ .+++++++|+++|....+ .-.+...+||+++
T Consensus 250 ~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~-~~~~l~~~p~~~H~~~~~---~~~~~~~~~l~~~ 320 (322)
T d1vlqa_ 250 SYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYA-GPKEIRIYPYNNHEGGGS---FQAVEQVKFLKKL 320 (322)
T ss_dssp HTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCC-SSEEEEEETTCCTTTTHH---HHHHHHHHHHHHH
T ss_pred hhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCC-CCeEEEEECCCCCCCccc---cCHHHHHHHHHHH
Confidence 0001111245688999999999999999999999998887 578999999999964321 1223344677654
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.88 E-value=3.5e-22 Score=153.78 Aligned_cols=207 Identities=14% Similarity=0.060 Sum_probs=134.6
Q ss_pred CCCCeEEEEcCC--CCCccccHHHHHHHhhccceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-hCCCcEEEEEe
Q 020916 61 PSKPVVVLVHGF--AAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK-LGVDKCVLVGF 137 (320)
Q Consensus 61 ~~~~~vv~lhG~--~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~lvGh 137 (320)
+.+|+++|+||. +++.. .|..+++.|...+.|+++|+||+|.+... ..+++.+++++.+.|.. .+.++++|+||
T Consensus 40 ~~~~~l~c~~~~~~gg~~~-~y~~La~~L~~~~~V~al~~pG~~~~e~~--~~s~~~~a~~~~~~i~~~~~~~P~~L~Gh 116 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPH-EFTRLAGALRGIAPVRAVPQPGYEEGEPL--PSSMAAVAAVQADAVIRTQGDKPFVVAGH 116 (255)
T ss_dssp SCSSEEEEECCCSSSCSGG-GGHHHHHHHTTTCCEEEECCTTSSTTCCE--ESSHHHHHHHHHHHHHHTTSSSCEEEEEC
T ss_pred CCCCeEEEECCCCCCCCHH-HHHHHHHhcCCCceEEEEeCCCcCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 367899999984 56667 99999999998899999999999987533 35889999988776644 56678999999
Q ss_pred ChhHHHHHHHHHhCc---cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc-ccCCch
Q 020916 138 SYGGMVSFKVAELYP---NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK-LWFPSC 213 (320)
Q Consensus 138 S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 213 (320)
||||.+|+++|.+.+ .+|.+++++++.............. .......... ......
T Consensus 117 S~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~ 176 (255)
T d1mo2a_ 117 SAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLE--------------------ELTATLFDRETVRMDDT 176 (255)
T ss_dssp STTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHHHH--------------------HHHTTCC----CCCCHH
T ss_pred CCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhHHH--------------------HHHHHhhccccccCCHH
Confidence 999999999998754 4589999999865322111100000 0000000000 001111
Q ss_pred hHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecCCCcccc
Q 020916 214 LYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKKAGHLVH 293 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 293 (320)
. +..+. ........+ ....+++|++++.+++|...... ..+..... ...+++.++| +|+.+
T Consensus 177 ~----l~a~~----~~~~~~~~~-------~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~-~~~~~~~v~G-~H~~m 237 (255)
T d1mo2a_ 177 R----LTALG----AYDRLTGQW-------RPRETGLPTLLVSAGEPMGPWPD--DSWKPTWP-FEHDTVAVPG-DHFTM 237 (255)
T ss_dssp H----HHHHH----HHHHHHHHC-------CCCCCCCCEEEEECCSSSSCCTT--CCCCCCCC-SSCEEEECCS-CCSSC
T ss_pred H----HHHHH----HHHHHHhcC-------CCccccceEEEeecCCCCCcchh--hHHHHhCC-CCcEEEEECC-CCccc
Confidence 1 11110 001111111 23467899999999887654322 22333333 4688999986 99855
Q ss_pred c-CChHHHHHHHHHHHH
Q 020916 294 L-ERPCAYNRCLKQFLA 309 (320)
Q Consensus 294 ~-~~~~~~~~~i~~fl~ 309 (320)
+ ++++.+++.|.+||.
T Consensus 238 l~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 238 VQEHADAIARHIDAWLG 254 (255)
T ss_dssp SSCCHHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHhC
Confidence 4 689999999999985
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.87 E-value=5.6e-21 Score=147.51 Aligned_cols=167 Identities=17% Similarity=0.166 Sum_probs=128.1
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh----------CC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL----------GV 129 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~----------~~ 129 (320)
+..|.||++||++++.. .+..+++.|+++ |.|+++|++|++... .....++.+.++.+ +.
T Consensus 50 g~~P~Vv~~HG~~g~~~-~~~~~a~~lA~~Gy~V~~~d~~~~~~~~--------~~~~~d~~~~~~~l~~~~~~~~~vD~ 120 (260)
T d1jfra_ 50 GTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQP--------DSRGRQLLSALDYLTQRSSVRTRVDA 120 (260)
T ss_dssp CCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCH--------HHHHHHHHHHHHHHHHTSTTGGGEEE
T ss_pred CCccEEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeeCCCcCCc--------hhhHHHHHHHHHHHHhhhhhhccccc
Confidence 34589999999999998 899999999999 999999999876543 23344444444432 34
Q ss_pred CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
+++.++|||+||.+++.++...+ ++.++|.+++...
T Consensus 121 ~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~------------------------------------------- 156 (260)
T d1jfra_ 121 TRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNT------------------------------------------- 156 (260)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCS-------------------------------------------
T ss_pred cceEEEeccccchHHHHHHhhhc-cchhheeeecccc-------------------------------------------
Confidence 57999999999999999998876 5777777665421
Q ss_pred CCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHH-HHHHHHHhC-CCCeEEEEecC
Q 020916 210 FPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVEL-AHNMKEQLG-ADHVTFQGIKK 287 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~-~~~~~~~~~~~ 287 (320)
...+.++++|+|+++|++|.++|++. .+.+.+.++ ....++++++|
T Consensus 157 --------------------------------~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~g 204 (260)
T d1jfra_ 157 --------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRG 204 (260)
T ss_dssp --------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETT
T ss_pred --------------------------------cccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECC
Confidence 01234678899999999999999865 555666554 34667899999
Q ss_pred CCcccccCChHHHHHHHHHHHHhhh
Q 020916 288 AGHLVHLERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 288 ~gH~~~~~~~~~~~~~i~~fl~~~~ 312 (320)
++|.........+.+.+..||+...
T Consensus 205 a~H~~~~~~~~~~~~~~~~wl~~~L 229 (260)
T d1jfra_ 205 ASHFTPNTSDTTIAKYSISWLKRFI 229 (260)
T ss_dssp CCTTGGGSCCHHHHHHHHHHHHHHH
T ss_pred CccCCCCCChHHHHHHHHHHHHHHh
Confidence 9999877766788888999998764
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=2.2e-19 Score=134.65 Aligned_cols=181 Identities=13% Similarity=0.166 Sum_probs=131.6
Q ss_pred CCCCeEEEEcCC---CCCcc-ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh---C--CC
Q 020916 61 PSKPVVVLVHGF---AAEGI-VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL---G--VD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~---~~~~~-~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---~--~~ 130 (320)
+..+++|++||. +++.. .....+++.|.+. +.|+.+|+||.|.|...... . ....+|..++++.+ . ..
T Consensus 22 ~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~-~-~~e~~d~~aa~~~~~~~~~~~~ 99 (218)
T d2i3da1 22 KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDH-G-AGELSDAASALDWVQSLHPDSK 99 (218)
T ss_dssp TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCS-S-HHHHHHHHHHHHHHHHHCTTCC
T ss_pred CCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCcccccc-c-hhHHHHHHHHHhhhhccccccc
Confidence 357899999984 34332 1345677888887 99999999999999865433 2 22234444444443 2 35
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccC
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF 210 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (320)
+++++|+|+||.+++.++.+.+ .+.+++++.+......
T Consensus 100 ~~~~~g~S~G~~~a~~~a~~~~-~~~~~~~~~~~~~~~~----------------------------------------- 137 (218)
T d2i3da1 100 SCWVAGYSFGAWIGMQLLMRRP-EIEGFMSIAPQPNTYD----------------------------------------- 137 (218)
T ss_dssp CEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTSC-----------------------------------------
T ss_pred ceeEEeeehHHHHHHHHHHhhc-cccceeeccccccccc-----------------------------------------
Confidence 7999999999999999998775 3667777665542100
Q ss_pred CchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC---CCCeEEEEecC
Q 020916 211 PSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG---ADHVTFQGIKK 287 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 287 (320)
...+....+|+++++|+.|.+++.+....+.+.+. ....++++++|
T Consensus 138 -------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~g 186 (218)
T d2i3da1 138 -------------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPG 186 (218)
T ss_dssp -------------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETT
T ss_pred -------------------------------hhhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCC
Confidence 01234457899999999999999999888887765 23568999999
Q ss_pred CCcccccCChHHHHHHHHHHHHhhhhcccC
Q 020916 288 AGHLVHLERPCAYNRCLKQFLASLHADEQF 317 (320)
Q Consensus 288 ~gH~~~~~~~~~~~~~i~~fl~~~~~~~~~ 317 (320)
++|++. .+.+++.+.+.+||++.-+++..
T Consensus 187 AdHfF~-g~~~~l~~~v~~~l~~~l~~~~~ 215 (218)
T d2i3da1 187 ANHFFN-GKVDELMGECEDYLDRRLNGELV 215 (218)
T ss_dssp CCTTCT-TCHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCCCc-CCHHHHHHHHHHHHHHhcCCCCC
Confidence 999875 67799999999999987665543
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.86 E-value=2.4e-24 Score=172.36 Aligned_cols=235 Identities=17% Similarity=0.154 Sum_probs=126.6
Q ss_pred CCCCeEEEEcCCCCCccccHHH-------HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhC--CC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQF-------QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLG--VD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~-------~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~--~~ 130 (320)
+++++|||+||++.++. .|.. +++.+.++ |+|+++|+||||.|..+....+...+.+++.+.++.+. ..
T Consensus 56 ~~~~PvvllHG~~~~~~-~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 134 (318)
T d1qlwa_ 56 AKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGH 134 (318)
T ss_dssp CCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCH
T ss_pred CCCCcEEEECCCCCCcC-ccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHhhccc
Confidence 46778999999999988 8864 46666666 99999999999999865433344444444455444443 23
Q ss_pred cEEEEEeChhHHHHHHHHHhCcccc-ccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccc-
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLV-QAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKL- 208 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v-~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (320)
+..++|||+||.++..++....... ..+++.+........... ....................
T Consensus 135 ~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~ 199 (318)
T d1qlwa_ 135 EAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPT---------------PNPTVANLSKLAIKLDGTVLL 199 (318)
T ss_dssp HHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCS---------------SCHHHHHHHHHHHHHTSEEEE
T ss_pred ccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhh---------------hhhhHHHHHHHHhhhccccch
Confidence 5778899999999888876653322 222222211111000000 00000001111111100000
Q ss_pred cCCchhHHHHHHHHhcChhhHHHHh--hhhhccCCCCCCCCCCCcEEEEecCCCCCCCHH-----HHHHHHHHhC--CCC
Q 020916 209 WFPSCLYKDFLEVMFANRKERAELL--EGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVE-----LAHNMKEQLG--ADH 279 (320)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-----~~~~~~~~~~--~~~ 279 (320)
.........+..... ......... ..............+++|+|+++|++|..+|.. ..+.+.+.+. ..+
T Consensus 200 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~ 278 (318)
T d1qlwa_ 200 SHSQSGIYPFQTAAM-NPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGK 278 (318)
T ss_dssp EEGGGTTHHHHHHHH-CCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCC
T ss_pred hhhcccchhhhhhhh-hhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHHHHhCCC
Confidence 000000000000000 000000000 000001112345567899999999999999843 2333333321 247
Q ss_pred eEEEEec-----CCCcccccCC-hHHHHHHHHHHHHhhh
Q 020916 280 VTFQGIK-----KAGHLVHLER-PCAYNRCLKQFLASLH 312 (320)
Q Consensus 280 ~~~~~~~-----~~gH~~~~~~-~~~~~~~i~~fl~~~~ 312 (320)
++++.+| |+||+++.|. ++++++.|.+||++..
T Consensus 279 ~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 279 GQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp EEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred cEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhcc
Confidence 8888865 6789999886 4999999999999864
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=5e-20 Score=139.48 Aligned_cols=181 Identities=17% Similarity=0.179 Sum_probs=123.4
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCCCC--------------CC-CCCCCC---hhHHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFGGS--------------IT-DEADRS---PTFQAQCLA 121 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s--------------~~-~~~~~~---~~~~~~~l~ 121 (320)
+..++|||+||+|++.. .|..++..+... +.+++++-|.+..+ .. ...... .....+.+.
T Consensus 19 ~~~~~VI~lHG~G~~~~-~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~ 97 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIK 97 (229)
T ss_dssp CCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH-HHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHH
Confidence 35678999999999998 898888888666 89999886532111 00 001111 223344444
Q ss_pred HHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHH
Q 020916 122 TGLAKL-----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGL 196 (320)
Q Consensus 122 ~~l~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (320)
.+++.. +.++++++|+|+||.+|+.++.++|+++.+++.+++.........
T Consensus 98 ~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~~------------------------ 153 (229)
T d1fj2a_ 98 ALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP------------------------ 153 (229)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSC------------------------
T ss_pred HHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccccc------------------------
Confidence 444432 346899999999999999999999999999998876432110000
Q ss_pred HHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC
Q 020916 197 KALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 276 (320)
.........++|++++||++|.++|.+..+...+.+.
T Consensus 154 -------------------------------------------~~~~~~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~ 190 (229)
T d1fj2a_ 154 -------------------------------------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLK 190 (229)
T ss_dssp -------------------------------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccccccCceeEEEcCCCCeeCHHHHHHHHHHHH
Confidence 0000112235799999999999999988877666553
Q ss_pred ----CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhhhh
Q 020916 277 ----ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASLHA 313 (320)
Q Consensus 277 ----~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 313 (320)
..++++++++|+||.+. ++ ..+.+.+||++.-+
T Consensus 191 ~~~~~~~v~~~~~~g~gH~i~---~~-~~~~~~~wL~~~Lp 227 (229)
T d1fj2a_ 191 TLVNPANVTFKTYEGMMHSSC---QQ-EMMDVKQFIDKLLP 227 (229)
T ss_dssp HHSCGGGEEEEEETTCCSSCC---HH-HHHHHHHHHHHHSC
T ss_pred hcCCCCceEEEEeCCCCCccC---HH-HHHHHHHHHHhHCc
Confidence 23678999999999753 33 45678899988653
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.85 E-value=8.6e-20 Score=135.77 Aligned_cols=173 Identities=16% Similarity=0.156 Sum_probs=123.8
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC------CCCChhHH---HHHHHHH----HHH
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE------ADRSPTFQ---AQCLATG----LAK 126 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~------~~~~~~~~---~~~l~~~----l~~ 126 (320)
++++|+||++||++++.. .|..+++.|.+.+.|++++.+..+...... ......+. .+++... .+.
T Consensus 11 ~~~~P~vi~lHG~g~~~~-~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (202)
T d2h1ia1 11 DTSKPVLLLLHGTGGNEL-DLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKE 89 (202)
T ss_dssp CTTSCEEEEECCTTCCTT-TTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHH-HHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999999998 999999999988999998765433221111 11222222 2233333 334
Q ss_pred hC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh
Q 020916 127 LG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT 204 (320)
Q Consensus 127 ~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (320)
.+ ..++.++|+|+||.+++.++..+|+++.+++++++......
T Consensus 90 ~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~----------------------------------- 134 (202)
T d2h1ia1 90 YKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG----------------------------------- 134 (202)
T ss_dssp TTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-----------------------------------
T ss_pred ccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc-----------------------------------
Confidence 34 45899999999999999999999999999998876542100
Q ss_pred hccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEE
Q 020916 205 YKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTF 282 (320)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~ 282 (320)
.........|+++++|++|+++|++..+.+.+.+. +.+.++
T Consensus 135 -------------------------------------~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 177 (202)
T d2h1ia1 135 -------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM 177 (202)
T ss_dssp -------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE
T ss_pred -------------------------------------ccccccccchhhcccccCCCccCHHHHHHHHHHHHHCCCCEEE
Confidence 01123345789999999999999999998888876 235788
Q ss_pred EEecCCCcccccCChHHHHHHHHHHHHh
Q 020916 283 QGIKKAGHLVHLERPCAYNRCLKQFLAS 310 (320)
Q Consensus 283 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 310 (320)
+.+++ ||.+. .+..+.+.+||++
T Consensus 178 ~~~~g-gH~~~----~~~~~~~~~wl~k 200 (202)
T d2h1ia1 178 HWENR-GHQLT----MGEVEKAKEWYDK 200 (202)
T ss_dssp EEESS-TTSCC----HHHHHHHHHHHHH
T ss_pred EEECC-CCcCC----HHHHHHHHHHHHH
Confidence 89986 89653 3456678889876
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.85 E-value=1.5e-20 Score=145.51 Aligned_cols=226 Identities=12% Similarity=0.033 Sum_probs=135.4
Q ss_pred cCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCC----ccccHHHHHHHhhcc-ceEEecCCCCCC
Q 020916 28 IEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAE----GIVTWQFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 28 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~----~~~~~~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
..||.++.|+..-|+.-+ +.+.-|+||++||.++. ....+......+++. |.|+.+|+||.+
T Consensus 10 ~~~~~~~~~~l~lP~~~~-------------~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~ 76 (258)
T d2bgra2 10 ILNETKFWYQMILPPHFD-------------KSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSG 76 (258)
T ss_dssp EETTEEEEEEEEECTTCC-------------TTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCS
T ss_pred EeCCcEEEEEEEECCCcC-------------CCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccC
Confidence 338999999887664321 11234899999995211 111233344456666 999999999987
Q ss_pred CCCCC-----CCCCChhHHHHHHHHHHHHhC------CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 103 GSITD-----EADRSPTFQAQCLATGLAKLG------VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 103 ~s~~~-----~~~~~~~~~~~~l~~~l~~~~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
.+... ..... ....+++.++++.+. .+++.++|+|+||.+++.++..+|+.+...+...+........
T Consensus 77 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (258)
T d2bgra2 77 YQGDKIMHAINRRLG-TFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD 155 (258)
T ss_dssp SSCHHHHGGGTTCTT-SHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB
T ss_pred CcchHHHHhhhhhhh-hHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeeccccccccc
Confidence 54321 11111 122344555555552 2469999999999999999999998777666555433211100
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCC-CC
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNF-PQ 250 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 250 (320)
.. ... ...... ........ ... ........++ ++
T Consensus 156 ~~---------------------~~~----~~~~~~--~~~~~~~~-~~~-----------------~~~~~~~~~~~~~ 190 (258)
T d2bgra2 156 SV---------------------YTE----RYMGLP--TPEDNLDH-YRN-----------------STVMSRAENFKQV 190 (258)
T ss_dssp HH---------------------HHH----HHHCCC--STTTTHHH-HHH-----------------SCSGGGGGGGGGS
T ss_pred cc---------------------ccc----hhcccc--cchhhHHH-hhc-----------------ccccccccccccC
Confidence 00 000 000000 00000000 000 0000112222 37
Q ss_pred cEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHHHhhh
Q 020916 251 RVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 251 P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~ 312 (320)
|+++++|++|..+|+..+..+.+.+. +.++++++++|++|.+.. +..+.+.+.+.+||++.-
T Consensus 191 P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l 255 (258)
T d2bgra2 191 EYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCF 255 (258)
T ss_dssp EEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHT
T ss_pred ChheeeecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHHh
Confidence 99999999999999998888877764 347899999999998643 456788999999998763
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.85 E-value=7.7e-20 Score=138.86 Aligned_cols=197 Identities=20% Similarity=0.187 Sum_probs=137.2
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHHhhcc-ceEEecCCCCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGALTKK-YSVYIPDLLFFG 102 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G 102 (320)
..++..||.+++.+...|. .++.|.||++|+..+... ..+.+++.|++. |.|+++|+.|.+
T Consensus 6 v~~~~~dg~~~~a~~~~P~-----------------~~~~P~vl~~h~~~G~~~-~~~~~a~~lA~~Gy~vl~pd~~~~~ 67 (233)
T d1dina_ 6 ISIQSYDGHTFGALVGSPA-----------------KAPAPVIVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQ 67 (233)
T ss_dssp CCEECTTSCEECEEEECCS-----------------SSSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGT
T ss_pred EEEEcCCCCEEEEEEECCC-----------------CCCceEEEEeCCCCCCCH-HHHHHHHHHHhcCCcceeeeeccCC
Confidence 3466668999999887763 247899999998777666 677888899988 999999987665
Q ss_pred CCCCCCCC---------------CChhHHHHHHHHHHHHhC-----CCcEEEEEeChhHHHHHHHHHhCccccccEEEec
Q 020916 103 GSITDEAD---------------RSPTFQAQCLATGLAKLG-----VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSG 162 (320)
Q Consensus 103 ~s~~~~~~---------------~~~~~~~~~l~~~l~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 162 (320)
........ .+.+....|+...++.+. .+++.++|+|+||.+++.++...+ +.+.+...
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~~--~~~~~~~~ 145 (233)
T d1dina_ 68 APGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY--VDRAVGYY 145 (233)
T ss_dssp STTCBCCTTSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEES
T ss_pred CcCcccChHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeecccccc--cceecccc
Confidence 54332211 233444566676666652 247999999999999999887643 45544332
Q ss_pred ccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCC
Q 020916 163 SILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKD 242 (320)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (320)
+.... . ..
T Consensus 146 ~~~~~--------------------------------------------~----------------------------~~ 153 (233)
T d1dina_ 146 GVGLE--------------------------------------------K----------------------------QL 153 (233)
T ss_dssp CSCGG--------------------------------------------G----------------------------GG
T ss_pred ccccc--------------------------------------------c----------------------------ch
Confidence 21100 0 00
Q ss_pred CCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC-CCCeEEEEecCCCcccccCC--------hHHHHHHHHHHHHhhh
Q 020916 243 PTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG-ADHVTFQGIKKAGHLVHLER--------PCAYNRCLKQFLASLH 312 (320)
Q Consensus 243 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~--------~~~~~~~i~~fl~~~~ 312 (320)
...+++++|+++++|++|+.+|.+..+.+.+.+. +.+.++++++|++|.+..+. .+...+.+.+||..+.
T Consensus 154 ~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~~ 232 (233)
T d1dina_ 154 NKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPLQ 232 (233)
T ss_dssp GGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGC
T ss_pred hhhhccCCcceeeecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcCc
Confidence 0234577899999999999999998888877665 34679999999999875422 1334566778887654
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.85 E-value=5.6e-20 Score=137.30 Aligned_cols=171 Identities=16% Similarity=0.214 Sum_probs=116.1
Q ss_pred CCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCC--CC-C-CCC--CCCCChhHH---HHHHH----HHHHH
Q 020916 60 KPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFF--GG-S-ITD--EADRSPTFQ---AQCLA----TGLAK 126 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~--G~-s-~~~--~~~~~~~~~---~~~l~----~~l~~ 126 (320)
.+++|+||++||++++.. .|..+++.|.+++.+++++.+.. |. . ... ......... ++++. .+.++
T Consensus 20 ~~~~p~vv~lHG~g~~~~-~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 98 (209)
T d3b5ea1 20 KESRECLFLLHGSGVDET-TLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKR 98 (209)
T ss_dssp SSCCCEEEEECCTTBCTT-TTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCHH-HHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999 99999999998888888865421 10 0 000 111122222 23333 33333
Q ss_pred hC--CCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhh
Q 020916 127 LG--VDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVAT 204 (320)
Q Consensus 127 ~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (320)
.+ .++++++|||+||.+++.++..+|+++++++++++......
T Consensus 99 ~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~----------------------------------- 143 (209)
T d3b5ea1 99 HGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH----------------------------------- 143 (209)
T ss_dssp HTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS-----------------------------------
T ss_pred hCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccc-----------------------------------
Confidence 33 46799999999999999999999999999999887542100
Q ss_pred hccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEE
Q 020916 205 YKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTF 282 (320)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~ 282 (320)
.......++|+++++|++|++++. ..+.+.+.+. +.++++
T Consensus 144 -------------------------------------~~~~~~~~~p~~~~~G~~D~~~~~-~~~~~~~~l~~~G~~v~~ 185 (209)
T d3b5ea1 144 -------------------------------------VPATDLAGIRTLIIAGAADETYGP-FVPALVTLLSRHGAEVDA 185 (209)
T ss_dssp -------------------------------------CCCCCCTTCEEEEEEETTCTTTGG-GHHHHHHHHHHTTCEEEE
T ss_pred -------------------------------------ccccccccchheeeeccCCCccCH-HHHHHHHHHHHCCCCeEE
Confidence 001223467999999999999873 3444444443 246789
Q ss_pred EEecCCCcccccCChHHHHHHHHHHHH
Q 020916 283 QGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 283 ~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
+++++ ||.+. ++ ..+.+.+||.
T Consensus 186 ~~~~g-gH~i~---~~-~~~~~~~wl~ 207 (209)
T d3b5ea1 186 RIIPS-GHDIG---DP-DAAIVRQWLA 207 (209)
T ss_dssp EEESC-CSCCC---HH-HHHHHHHHHH
T ss_pred EEECC-CCCCC---HH-HHHHHHHHhC
Confidence 99987 89774 33 3456788885
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.84 E-value=2e-19 Score=133.78 Aligned_cols=175 Identities=19% Similarity=0.175 Sum_probs=126.6
Q ss_pred cCCCCCeEEEEcCCCCCccccHHHHHHHhhccceEEecCCCCCCCCCCCC------CCCChh---HHHHHHHHHHH----
Q 020916 59 KKPSKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSITDE------ADRSPT---FQAQCLATGLA---- 125 (320)
Q Consensus 59 ~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~------~~~~~~---~~~~~l~~~l~---- 125 (320)
++++.|+||++||++++.. .|..+++.|.+.+.|++++.+..+...... ...... ..++.+..+++
T Consensus 13 ~~~~~P~vi~lHG~G~~~~-~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 91 (203)
T d2r8ba1 13 GVAGAPLFVLLHGTGGDEN-QFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANRE 91 (203)
T ss_dssp CCTTSCEEEEECCTTCCHH-HHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHH-HHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHHHHHHHhhh
Confidence 3467999999999999988 899999999888888888766443332211 112222 22334444443
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhh
Q 020916 126 KLGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATY 205 (320)
Q Consensus 126 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (320)
..+.++++++|+|+||.+++.++..+|+.+.+++++++.......
T Consensus 92 ~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~----------------------------------- 136 (203)
T d2r8ba1 92 HYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK----------------------------------- 136 (203)
T ss_dssp HHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC-----------------------------------
T ss_pred cCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc-----------------------------------
Confidence 456788999999999999999999999999999998876421100
Q ss_pred ccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEE
Q 020916 206 KKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQ 283 (320)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~ 283 (320)
........|+++++|++|+++|.+.++.+.+.+. +.+++++
T Consensus 137 -------------------------------------~~~~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~ 179 (203)
T d2r8ba1 137 -------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETV 179 (203)
T ss_dssp -------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEEE
T ss_pred -------------------------------------cccccccchhhccccCCCCcccHHHHHHHHHHHHHCCCCEEEE
Confidence 0112335689999999999999999988888775 2357889
Q ss_pred EecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 284 GIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 284 ~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
++++ ||.+. ++ ..+.+.+||.+.
T Consensus 180 ~~~g-gH~~~---~~-~~~~~~~wl~~~ 202 (203)
T d2r8ba1 180 WHPG-GHEIR---SG-EIDAVRGFLAAY 202 (203)
T ss_dssp EESS-CSSCC---HH-HHHHHHHHHGGG
T ss_pred EECC-CCcCC---HH-HHHHHHHHHHhc
Confidence 9986 89854 33 456688998763
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.6e-19 Score=139.60 Aligned_cols=230 Identities=12% Similarity=0.068 Sum_probs=133.4
Q ss_pred CCceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCc--cccH--HHHHHHhhcc-ceEEe
Q 020916 21 VQPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEG--IVTW--QFQVGALTKK-YSVYI 95 (320)
Q Consensus 21 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~--~~~~--~~~~~~l~~~-~~vi~ 95 (320)
++.+++.+ ||.+|+.+...|+.-++ .+.-|+||++||.+++. ...| ......|+++ |.|++
T Consensus 3 v~~~~i~~-dg~~l~~~l~~P~~~~~-------------~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~ 68 (258)
T d1xfda2 3 VEYRDIEI-DDYNLPMQILKPATFTD-------------TTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVK 68 (258)
T ss_dssp CCBCCEEE-TTEEECCBEEBCSSCCS-------------SSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEC
T ss_pred eEEEEEee-CCeEEEEEEEECCCcCC-------------CCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEE
Confidence 45667777 89999998887643221 12348999999963221 1122 2234567777 99999
Q ss_pred cCCCCCCCCCCC-----CCCCChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCccc----cccEEE
Q 020916 96 PDLLFFGGSITD-----EADRSPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNL----VQAMVV 160 (320)
Q Consensus 96 ~d~~G~G~s~~~-----~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~----v~~lvl 160 (320)
+|+||.+.+... ...... ...+|+.++++.+ +.+++.++|+|+||.+++.++...++. +...+.
T Consensus 69 ~d~rGs~~~g~~~~~~~~~~~g~-~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~ 147 (258)
T d1xfda2 69 CDGRGSGFQGTKLLHEVRRRLGL-LEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSA 147 (258)
T ss_dssp CCCTTCSSSHHHHHHTTTTCTTT-HHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEE
T ss_pred eccccccccchhHhhhhhccchh-HHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeec
Confidence 999985433210 111111 2255566666654 235799999999999999887766542 333333
Q ss_pred ecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccC
Q 020916 161 SGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISN 240 (320)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (320)
+.+........ ........ ......... . ........
T Consensus 148 ~~~~~~~~~~~---------------------~~~~~~~~----~~~~~~~~~-~------------~~~s~~~~----- 184 (258)
T d1xfda2 148 LSPITDFKLYA---------------------SAFSERYL----GLHGLDNRA-Y------------EMTKVAHR----- 184 (258)
T ss_dssp ESCCCCTTSSB---------------------HHHHHHHH----CCCSSCCSS-T------------TTTCTHHH-----
T ss_pred cccceeeeccc---------------------cccccccc----cccccchHH-h------------hccchhhh-----
Confidence 33322110000 00000000 000000000 0 00000000
Q ss_pred CCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-CChHHHHHHHHHHHHhh
Q 020916 241 KDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-ERPCAYNRCLKQFLASL 311 (320)
Q Consensus 241 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 311 (320)
.....++|+|+++|+.|..+|++.+..+.+.+. +.+.+++++|+++|.+.. +....+.+.+.+|+++.
T Consensus 185 ---~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~ 255 (258)
T d1xfda2 185 ---VSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVEC 255 (258)
T ss_dssp ---HTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTT
T ss_pred ---hhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 011236799999999999999998888877664 347789999999997654 34566778899999764
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.80 E-value=9.9e-20 Score=141.27 Aligned_cols=219 Identities=11% Similarity=0.045 Sum_probs=116.2
Q ss_pred CCCCCeEEEEcCCCC-----CccccHHHH----HHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC
Q 020916 60 KPSKPVVVLVHGFAA-----EGIVTWQFQ----VGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV 129 (320)
Q Consensus 60 ~~~~~~vv~lhG~~~-----~~~~~~~~~----~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~ 129 (320)
++++|+||++||.+. +.. .|..+ +..+.+. +.|+++|+|..+.... ....++..+.+..+++..+.
T Consensus 28 ~~~~~~vv~iHGGg~~~~~~~~~-~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~---~~~~~d~~~~~~~l~~~~~~ 103 (263)
T d1vkha_ 28 QNTREAVIYIHGGAWNDPENTPN-DFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKGL 103 (263)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGG-GGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEEECCCCccCCCCCcc-hHHHHHHHHHHHHHhCCeEEEEeccccCcchhh---hHHHHhhhhhhhcccccccc
Confidence 357899999999641 233 44444 3455555 9999999996544321 22345555666666677788
Q ss_pred CcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcccc
Q 020916 130 DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLW 209 (320)
Q Consensus 130 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (320)
.+++|+|||+||.+++.++...++....+............................ . .........+..........
T Consensus 104 ~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 181 (263)
T d1vkha_ 104 TNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKE-L-LIEYPEYDCFTRLAFPDGIQ 181 (263)
T ss_dssp CCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHH-H-HHHCGGGHHHHHHHCTTCGG
T ss_pred cceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchh-h-hhhccccchhhhcccccccc
Confidence 899999999999999999987665433222111110000000000000000000000 0 00000000111111000000
Q ss_pred CCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecC
Q 020916 210 FPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKK 287 (320)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 287 (320)
........ ...... ..+..+.+|+++++|++|+++|.+.+..+.+.+. +.+++++++++
T Consensus 182 ~~~~~~~~-----------~~~~~~--------~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~~~~~~~~ 242 (263)
T d1vkha_ 182 MYEEEPSR-----------VMPYVK--------KALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDL 242 (263)
T ss_dssp GCCCCHHH-----------HHHHHH--------HHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred cccccccc-----------cCcccc--------ccccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 00000000 000000 0123356899999999999999999888888775 34689999999
Q ss_pred CCcccccCChHHHHHHH
Q 020916 288 AGHLVHLERPCAYNRCL 304 (320)
Q Consensus 288 ~gH~~~~~~~~~~~~~i 304 (320)
++|...+++.+ +.+.|
T Consensus 243 ~~H~~~~~~~~-~~~~i 258 (263)
T d1vkha_ 243 GLHNDVYKNGK-VAKYI 258 (263)
T ss_dssp CSGGGGGGCHH-HHHHH
T ss_pred CCchhhhcChH-HHHHH
Confidence 99987766644 44444
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.76 E-value=1.2e-18 Score=138.12 Aligned_cols=103 Identities=27% Similarity=0.333 Sum_probs=89.8
Q ss_pred CCCeEEEEcCCCCCccc-----cHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEE
Q 020916 62 SKPVVVLVHGFAAEGIV-----TWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLV 135 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~-----~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lv 135 (320)
++.||||+||++++... .|..+.+.|.+. |+|+++|+||+|.|.... ...+++++++.++++.++.+++++|
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~--~~~~~l~~~i~~~~~~~~~~~v~lv 84 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPN--GRGEQLLAYVKQVLAATGATKVNLI 84 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTT--SHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCc--ccHHHHHHHHHHHHHHhCCCCEEEE
Confidence 56679999999887651 377889999998 999999999999887443 4567788899999999999999999
Q ss_pred EeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 136 GFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 136 GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
||||||.++..++.++|++|+++|+++++..
T Consensus 85 GhS~GG~~~~~~~~~~p~~v~~vv~i~~p~~ 115 (319)
T d1cvla_ 85 GHSQGGLTSRYVAAVAPQLVASVTTIGTPHR 115 (319)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred eccccHHHHHHHHHHCccccceEEEECCCCC
Confidence 9999999999999999999999999998653
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.73 E-value=6.7e-18 Score=131.51 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCCCCCccc-cHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEEeC
Q 020916 61 PSKPVVVLVHGFAAEGIV-TWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVGFS 138 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvGhS 138 (320)
+.+++|||+||++.+... .|..+.+.|.+. |.|+.+|++|+|.++.. .+.+++++.+..+++..+.+++.|||||
T Consensus 29 ~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~---~sae~la~~i~~v~~~~g~~kV~lVGhS 105 (317)
T d1tcaa_ 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQ---VNTEYMVNAITALYAGSGNNKLPVLTWS 105 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHH---HHHHHHHHHHHHHHHHTTSCCEEEEEET
T ss_pred CCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchH---hHHHHHHHHHHHHHHhccCCceEEEEeC
Confidence 456789999999877651 256788999988 99999999999877532 2344556666666677788899999999
Q ss_pred hhHHHHHHHHHhCcc---ccccEEEeccccc
Q 020916 139 YGGMVSFKVAELYPN---LVQAMVVSGSILA 166 (320)
Q Consensus 139 ~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~ 166 (320)
|||.++..++..+|+ +|+.+|.++++..
T Consensus 106 ~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 106 QGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred chHHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence 999999999999885 6999999998764
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.73 E-value=9.8e-17 Score=120.29 Aligned_cols=176 Identities=18% Similarity=0.207 Sum_probs=112.8
Q ss_pred CCCCeEEEEcCCCCCccccHHHHHHHhhcc---ceEEecCCCC--------CCCCCC-------CCCCCChhH---HHHH
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQFQVGALTKK---YSVYIPDLLF--------FGGSIT-------DEADRSPTF---QAQC 119 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~---~~vi~~d~~G--------~G~s~~-------~~~~~~~~~---~~~~ 119 (320)
+.+++||++||+|++.. .|..+.+.|... +.+++++-|. ...... .......+. ....
T Consensus 12 ~~~~~Vi~lHG~G~~~~-~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 90 (218)
T d1auoa_ 12 PADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKM 90 (218)
T ss_dssp CCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCChh-hHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHH
Confidence 35679999999999999 898888888765 5666665431 110000 001112222 2222
Q ss_pred HHHHHHH---h--CCCcEEEEEeChhHHHHHHHHHh-CccccccEEEecccccccccccccccccccccccccccCcCcH
Q 020916 120 LATGLAK---L--GVDKCVLVGFSYGGMVSFKVAEL-YPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSV 193 (320)
Q Consensus 120 l~~~l~~---~--~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (320)
+.++++. . +.++++++|+|+||.+++.++.. .+..+.+++.+++.........
T Consensus 91 v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~--------------------- 149 (218)
T d1auoa_ 91 VTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDEL--------------------- 149 (218)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTC---------------------
T ss_pred HHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccccc---------------------
Confidence 3333332 2 34689999999999999988754 4567888888876431100000
Q ss_pred HHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHH
Q 020916 194 KGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKE 273 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 273 (320)
.. .....+.|++++||++|.++|.+..+.+.+
T Consensus 150 -----------------~~-------------------------------~~~~~~~pvl~~hG~~D~vvp~~~~~~~~~ 181 (218)
T d1auoa_ 150 -----------------EL-------------------------------SASQQRIPALCLHGQYDDVVQNAMGRSAFE 181 (218)
T ss_dssp -----------------CC-------------------------------CHHHHTCCEEEEEETTCSSSCHHHHHHHHH
T ss_pred -----------------cc-------------------------------chhccCCCEEEEecCCCCccCHHHHHHHHH
Confidence 00 000114589999999999999999888888
Q ss_pred HhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHHhh
Q 020916 274 QLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLASL 311 (320)
Q Consensus 274 ~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 311 (320)
.+. +.++++++++ +||... ++..+.+.+||.+.
T Consensus 182 ~L~~~g~~~~~~~~~-~gH~i~----~~~~~~i~~wl~~~ 216 (218)
T d1auoa_ 182 HLKSRGVTVTWQEYP-MGHEVL----PQEIHDIGAWLAAR 216 (218)
T ss_dssp HHHTTTCCEEEEEES-CSSSCC----HHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEEC-CCCccC----HHHHHHHHHHHHHh
Confidence 775 2367899997 589653 33456788888763
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.72 E-value=1.6e-16 Score=121.84 Aligned_cols=173 Identities=13% Similarity=0.107 Sum_probs=112.9
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh---CCCcEE
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL---GVDKCV 133 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~ 133 (320)
.+.|+||++||.+ ++.. .|..++..|.+. |.|+.+|+|..+. .+.....+|+.+.++.+ ..++++
T Consensus 60 ~~~P~vv~iHGG~w~~g~~~-~~~~~a~~l~~~G~~Vv~~~YRl~p~-------~~~p~~~~d~~~a~~~~~~~~~~rI~ 131 (261)
T d2pbla1 60 TPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPSYELCPE-------VRISEITQQISQAVTAAAKEIDGPIV 131 (261)
T ss_dssp SCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEECCCCTTT-------SCHHHHHHHHHHHHHHHHHHSCSCEE
T ss_pred CCCCeEEEECCCCCccCChh-HhhhHHHHHhcCCceeeccccccccc-------ccCchhHHHHHHHHHHHHhcccCceE
Confidence 4679999999964 3444 677788888888 9999999996433 24455566666555544 247899
Q ss_pred EEEeChhHHHHHHHHHhCc------cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 134 LVGFSYGGMVSFKVAELYP------NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 134 lvGhS~Gg~~a~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
|+|||.||.++..++.... ..+++++.+++.....+..... ....+
T Consensus 132 l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~------- 183 (261)
T d2pbla1 132 LAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS---------------------MNEKF------- 183 (261)
T ss_dssp EEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST---------------------THHHH-------
T ss_pred EEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhh---------------------hcccc-------
Confidence 9999999999987765432 2467777777654322110000 00000
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEecC
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGADHVTFQGIKK 287 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (320)
....+ . .... ..........+|+++++|++|..++.++++.+.+.+. ++.+++++
T Consensus 184 -~~~~~--------------~-~~~~------SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~---~~~~~~~~ 238 (261)
T d2pbla1 184 -KMDAD--------------A-AIAE------SPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD---ADHVIAFE 238 (261)
T ss_dssp -CCCHH--------------H-HHHT------CGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT---CEEEEETT
T ss_pred -cCCHH--------------H-HHHh------CchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhC---CCceEeCC
Confidence 00000 0 0000 1112345667899999999999888888999999884 67889999
Q ss_pred CCccccc
Q 020916 288 AGHLVHL 294 (320)
Q Consensus 288 ~gH~~~~ 294 (320)
.+||-.+
T Consensus 239 ~~HF~vi 245 (261)
T d2pbla1 239 KHHFNVI 245 (261)
T ss_dssp CCTTTTT
T ss_pred CCchhHH
Confidence 9997554
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.71 E-value=1.1e-17 Score=129.75 Aligned_cols=100 Identities=25% Similarity=0.243 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCCCCcc----ccHHHHHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCCCcEEEEE
Q 020916 62 SKPVVVLVHGFAAEGI----VTWQFQVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGVDKCVLVG 136 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~----~~~~~~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG 136 (320)
.+-||||+||++++.. ..|..+.+.|.+. ++|+++|++|+|.+. ...+++++++.++++..+.+++++||
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~-----~~a~~l~~~i~~~~~~~g~~~v~lig 80 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSGQPKVNLIG 80 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH-----HHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 5667999999987655 1378899999998 999999999998654 34566788888888999999999999
Q ss_pred eChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 137 FSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|||||.++..++..+|++|+++|.++++..
T Consensus 81 HS~GG~~~r~~~~~~p~~v~~lv~i~tPh~ 110 (285)
T d1ex9a_ 81 HSHGGPTIRYVAAVRPDLIASATSVGAPHK 110 (285)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCTT
T ss_pred ECccHHHHHHHHHHCCccceeEEEECCCCC
Confidence 999999999999999999999999997653
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.68 E-value=1.1e-15 Score=122.99 Aligned_cols=248 Identities=12% Similarity=0.008 Sum_probs=130.5
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCC---Ccc-ccHHHHHHHhhcc-ceEEecCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAA---EGI-VTWQFQVGALTKK-YSVYIPDL 98 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~---~~~-~~~~~~~~~l~~~-~~vi~~d~ 98 (320)
.++...||..|..+++.++.. ++..|+||++||.+. +.. ..+..++..|++. +.|+.+|+
T Consensus 82 ~~i~~~dg~~i~~~iy~P~~~---------------~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdY 146 (358)
T d1jkma_ 82 ETILGVDGNEITLHVFRPAGV---------------EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDF 146 (358)
T ss_dssp EEEECTTSCEEEEEEEEETTC---------------CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEeCCCCCEEEEEEEecCCC---------------CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeee
Confidence 344555888888877665321 235679999999853 222 1456677888777 99999999
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHH-------HhCCCcEEEEEeChhHHHHHHHHHh-----CccccccEEEeccccc
Q 020916 99 LFFGGSITDEADRSPTFQAQCLATGLA-------KLGVDKCVLVGFSYGGMVSFKVAEL-----YPNLVQAMVVSGSILA 166 (320)
Q Consensus 99 ~G~G~s~~~~~~~~~~~~~~~l~~~l~-------~~~~~~~~lvGhS~Gg~~a~~~a~~-----~p~~v~~lvl~~~~~~ 166 (320)
|.-+...+. .......+|+.+.++ .++.++++|+|+|.||.+++.++.. ....+.++++..+...
T Consensus 147 Rla~~~~pe---~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~ 223 (358)
T d1jkma_ 147 RNAWTAEGH---HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 223 (358)
T ss_dssp CCSEETTEE---CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred ccccccccc---CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceec
Confidence 975332211 112223344333332 3466789999999999999877654 2345677777776553
Q ss_pred ccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCC
Q 020916 167 MTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVP 246 (320)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (320)
........ ........................+...+.........-..... ........
T Consensus 224 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~a~~~~~~ 283 (358)
T d1jkma_ 224 GGYAWDHE-------------------RRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPY-FASEDELR 283 (358)
T ss_dssp CCTTSCHH-------------------HHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGG-GCCHHHHT
T ss_pred cccCccch-------------------hhcccccchhcccccccchhhhhhHHhhcCCccCCccCcccccc-ccchhhcc
Confidence 22111100 00000000000011111222222222222111100000000000 00000000
Q ss_pred CCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccc---c----CChHHHHHHHHHHHHhhh
Q 020916 247 NFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVH---L----ERPCAYNRCLKQFLASLH 312 (320)
Q Consensus 247 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~---~----~~~~~~~~~i~~fl~~~~ 312 (320)
--.|+++++|+.|.+. +....+.+++. +..+++++++|.+|.+. . +..+++.+.|..|+....
T Consensus 284 -~lPp~li~~g~~D~l~--~e~~~~~~~L~~aGv~v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~ 355 (358)
T d1jkma_ 284 -GLPPFVVAVNELDPLR--DEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 355 (358)
T ss_dssp -TCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCEEEEECCCCCCH--HHHHHHHHHHHHCCCcEEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence 0138999999999764 44555555553 34789999999999642 1 123567788888987654
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.65 E-value=6.4e-16 Score=124.37 Aligned_cols=127 Identities=14% Similarity=0.088 Sum_probs=91.6
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcccc---HHHHHHHhhcc-ceEEecCCC
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVT---WQFQVGALTKK-YSVYIPDLL 99 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~---~~~~~~~l~~~-~~vi~~d~~ 99 (320)
..|..+||++|...++.|.. .++-|+||+.||++...... +....+.|+++ |.|+++|.|
T Consensus 8 v~ipmrDGv~L~~~vy~P~~----------------~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~R 71 (347)
T d1ju3a2 8 VMVPMRDGVRLAVDLYRPDA----------------DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTR 71 (347)
T ss_dssp EEEECTTSCEEEEEEEEECC----------------SSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECT
T ss_pred eEEECCCCCEEEEEEEEcCC----------------CCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeC
Confidence 35777799999998877632 13568999999987532212 22234567777 999999999
Q ss_pred CCCCCCCCCCC-CChhHHHHHHHHHHHHhCC--CcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 100 FFGGSITDEAD-RSPTFQAQCLATGLAKLGV--DKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 100 G~G~s~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
|+|.|...... ........|+.+.+..... ++|.++|+|+||.+++.+|...|..+++++...+...
T Consensus 72 G~g~S~G~~~~~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 72 GLFASEGEFVPHVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp TSTTCCSCCCTTTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred CccccCCccccccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 99999976533 2333334455555554432 5899999999999999999998888888888777653
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.63 E-value=1.2e-14 Score=114.91 Aligned_cols=235 Identities=13% Similarity=0.067 Sum_probs=124.7
Q ss_pred CceEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEec
Q 020916 22 QPHAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIP 96 (320)
Q Consensus 22 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~ 96 (320)
+..++.. +|.++....+.++.. +++.|+||++||.+ ++.. .+..++..+... +.|+.+
T Consensus 47 ~~~~~~~-~g~~i~~~~y~P~~~---------------~~~~Pvvv~iHGGg~~~g~~~-~~~~~~~~~a~~~~~~v~~v 109 (308)
T d1u4na_ 47 REFDMDL-PGRTLKVRMYRPEGV---------------EPPYPALVYYHGGGWVVGDLE-THDPVCRVLAKDGRAVVFSV 109 (308)
T ss_dssp EEEEEEE-TTEEEEEEEEECTTC---------------CSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEE
T ss_pred EEEEEec-CCceEEEEEEecccc---------------CCCCCEEEEEecCeeeeeccc-cccchhhhhhhccccccccc
Confidence 3344455 577666655544211 23568999999975 3455 677777777776 678889
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHh-------C--CCcEEEEEeChhHHHHHHHHHhCcc----ccccEEEecc
Q 020916 97 DLLFFGGSITDEADRSPTFQAQCLATGLAKL-------G--VDKCVLVGFSYGGMVSFKVAELYPN----LVQAMVVSGS 163 (320)
Q Consensus 97 d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-------~--~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~ 163 (320)
|+|..... ......+|+...++.+ + .++++++|+|.||.+++.++....+ .+.+..++.+
T Consensus 110 ~Yrl~p~~-------~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~ 182 (308)
T d1u4na_ 110 DYRLAPEH-------KFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYP 182 (308)
T ss_dssp CCCCTTTS-------CTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESC
T ss_pred cccccccc-------ccccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccc
Confidence 99854332 2223344444444333 1 3479999999999999988866443 3455566555
Q ss_pred cccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCC
Q 020916 164 ILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDP 243 (320)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (320)
............... .................................. ...
T Consensus 183 ~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~ 234 (308)
T d1u4na_ 183 STGYDPAHPPASIEE-------------------------NAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPV---LYP 234 (308)
T ss_dssp CCCCCTTSCCHHHHH-------------------------TSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGG---GCS
T ss_pred ccccccccccchhhh-------------------------ccccccccchhhhhhhhcccCccccccchhhhhh---hch
Confidence 443221111000000 0000001111111111111111111100000000 000
Q ss_pred CCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccccc-C----ChHHHHHHHHHHHHhh
Q 020916 244 TVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHL-E----RPCAYNRCLKQFLASL 311 (320)
Q Consensus 244 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~-~----~~~~~~~~i~~fl~~~ 311 (320)
... --.|+++++|+.|..+ .....+.+.+. +..+++++++|.+|.+.. . ..++..+.+.+||++.
T Consensus 235 d~~-~~Pp~li~~g~~D~l~--~~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~ 306 (308)
T d1u4na_ 235 DLS-GLPPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 306 (308)
T ss_dssp CCT-TCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHH
T ss_pred hhc-CCCCeeEEecCcCCch--HHHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 111 1238999999999765 45566666654 347899999999996542 1 2346777888888764
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.62 E-value=9.5e-15 Score=115.88 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=56.2
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhc-c-ceEEecCCCCCCCCCCCCCCCChhHHHH---HHHHHHHHhCC--C
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTK-K-YSVYIPDLLFFGGSITDEADRSPTFQAQ---CLATGLAKLGV--D 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~-~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~---~l~~~l~~~~~--~ 130 (320)
+..|+||++||.+ ++.. .+..++..+.. . +.|+.+|+|.......+. .+++..+ .+.+..+.+++ +
T Consensus 76 ~~~Pvvv~iHGGG~~~g~~~-~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~~---~~~d~~~~~~~~~~~~~~~g~D~~ 151 (317)
T d1lzla_ 76 GPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPETTFPG---PVNDCYAALLYIHAHAEELGIDPS 151 (317)
T ss_dssp SCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTSCTTH---HHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCCcEEEEecCccccccccc-ccchHHHhHHhhcCCccccccccccccccccc---cccccccchhHHHHHHHHhCCCHH
Confidence 3567999999975 3445 66667766654 3 999999999765433211 1122112 22222233333 5
Q ss_pred cEEEEEeChhHHHHHHHHHhCc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYP 152 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p 152 (320)
+++++|+|.||.+++.++...+
T Consensus 152 rI~l~G~SaGg~la~~~~~~~~ 173 (317)
T d1lzla_ 152 RIAVGGQSAGGGLAAGTVLKAR 173 (317)
T ss_dssp EEEEEEETHHHHHHHHHHHHHH
T ss_pred HEEEEEeccccHHHHHHHhhhh
Confidence 7999999999999998887643
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.59 E-value=8.7e-15 Score=115.56 Aligned_cols=207 Identities=12% Similarity=0.086 Sum_probs=110.0
Q ss_pred CCCCeEEEEcCCC---CCccccHHHHHHHhhcc--ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHH-------HHhC
Q 020916 61 PSKPVVVLVHGFA---AEGIVTWQFQVGALTKK--YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGL-------AKLG 128 (320)
Q Consensus 61 ~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l-------~~~~ 128 (320)
++.|.||++||.+ ++.. .+..++..+... +.|+.+|+|...... .....+|....+ +.++
T Consensus 77 ~~~P~il~iHGGg~~~g~~~-~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~-------~p~~~~d~~~a~~~~~~~~~~~~ 148 (311)
T d1jjia_ 77 PDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEHK-------FPAAVYDCYDATKWVAENAEELR 148 (311)
T ss_dssp SSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTSC-------TTHHHHHHHHHHHHHHHTHHHHT
T ss_pred CCceEEEEEcCCCCccCChh-hhhhhhhhhhhcCCcEEEEeccccccccc-------cchhhhhhhhhhhHHHHhHHHhC
Confidence 3668999999985 3445 667777766554 999999999543221 222233333332 2333
Q ss_pred --CCcEEEEEeChhHHHHHHHHHhCc----cccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhH
Q 020916 129 --VDKCVLVGFSYGGMVSFKVAELYP----NLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSV 202 (320)
Q Consensus 129 --~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (320)
.++++++|+|.||.+++.++.... ..+.+.+++.+............ .. ..
T Consensus 149 ~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~--~~-----~~---------------- 205 (311)
T d1jjia_ 149 IDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLL--EF-----GE---------------- 205 (311)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHH--HT-----SS----------------
T ss_pred cChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCccccc--cc-----cc----------------
Confidence 357999999999999887765432 24567777777654322111000 00 00
Q ss_pred hhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCe
Q 020916 203 ATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHV 280 (320)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~ 280 (320)
................................. ... .-..|+++++|+.|..+ .....+.+.+. +..+
T Consensus 206 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~----~~~-~~~pP~li~~g~~D~l~--d~~~~~~~~L~~~Gv~v 275 (311)
T d1jjia_ 206 ---GLWILDQKIMSWFSEQYFSREEDKFNPLASVIF----ADL-ENLPPALIITAEYDPLR--DEGEVFGQMLRRAGVEA 275 (311)
T ss_dssp ---SCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGG----SCC-TTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCE
T ss_pred ---ccccccHHHhhhhhhhcccccccccccccchhh----ccc-ccCCCEEEEEcCCCCCh--HHHHHHHHHHHHCCCCE
Confidence 000001111111111111111100000000000 111 12358999999999764 34555555553 3478
Q ss_pred EEEEecCCCccccc-----CChHHHHHHHHHHH
Q 020916 281 TFQGIKKAGHLVHL-----ERPCAYNRCLKQFL 308 (320)
Q Consensus 281 ~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl 308 (320)
++++++|++|.+.. +..++..+.|.+||
T Consensus 276 ~~~~~~g~~H~F~~~~~~~~~a~~a~~~i~~fl 308 (311)
T d1jjia_ 276 SIVRYRGVLHGFINYYPVLKAARDAINQIAALL 308 (311)
T ss_dssp EEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCccccCCCcCHHHHHHHHHHHHHh
Confidence 99999999996542 12345666777776
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.59 E-value=2.4e-13 Score=105.63 Aligned_cols=241 Identities=13% Similarity=0.001 Sum_probs=126.9
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc-ccH-HHHHHHhhcc-ceEEecCCCCC
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI-VTW-QFQVGALTKK-YSVYIPDLLFF 101 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~-~~~-~~~~~~l~~~-~~vi~~d~~G~ 101 (320)
++...||.+|.++...++..+ .+++.|+||++||.+.... ..+ ......+... +-+...+.++.
T Consensus 11 ~~~s~DG~~i~~~l~~P~~~~-------------~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (280)
T d1qfma2 11 FYPSKDGTKIPMFIVHKKGIK-------------LDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGG 77 (280)
T ss_dssp EEECTTSCEEEEEEEEETTCC-------------CSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTS
T ss_pred EEECCCCCEEEEEEEEcCCCC-------------CCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccc
Confidence 345569999999887764322 1246789999999755433 112 2223334444 55555555543
Q ss_pred CCCCCC---CC-CCChhHHHHHHHHHH----HHh--CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccc
Q 020916 102 GGSITD---EA-DRSPTFQAQCLATGL----AKL--GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSI 171 (320)
Q Consensus 102 G~s~~~---~~-~~~~~~~~~~l~~~l----~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 171 (320)
...... .. ........++..... ... ......++|+|.||..+...+...++.+.+++...+........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (280)
T d1qfma2 78 GEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFH 157 (280)
T ss_dssp STTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG
T ss_pred cccchhhhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhc
Confidence 321110 01 111111122222222 222 22468899999999999999999998777777666554321111
Q ss_pred cccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCc
Q 020916 172 NETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQR 251 (320)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 251 (320)
........ ... .. . .......... ....................|
T Consensus 158 ~~~~~~~~-----------------~~~-----~~-~-~~~~~~~~~~-----------~~~~~~~~~s~~~~~~~~~pP 202 (280)
T d1qfma2 158 KYTIGHAW-----------------TTD-----YG-C-SDSKQHFEWL-----------IKYSPLHNVKLPEADDIQYPS 202 (280)
T ss_dssp GSTTGGGG-----------------HHH-----HC-C-TTSHHHHHHH-----------HHHCGGGCCCCCSSTTCCCCE
T ss_pred cccccccc-----------------eec-----cc-C-CCcccccccc-----------cccccccccchhhhcccCCCc
Confidence 00000000 000 00 0 0000000000 000111111111222223448
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHhC---------CCCeEEEEecCCCcccccCChH--HHHHHHHHHHHhhhh
Q 020916 252 VHLLWGEDDQIFNVELAHNMKEQLG---------ADHVTFQGIKKAGHLVHLERPC--AYNRCLKQFLASLHA 313 (320)
Q Consensus 252 ~l~i~g~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~~~~ 313 (320)
+|++||++|..+|...+.++.+.+. +..+++++++++||.+.....+ +....+.+||++...
T Consensus 203 ~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~ 275 (280)
T d1qfma2 203 MLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 275 (280)
T ss_dssp EEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999988888872 2457899999999976433222 333456789987654
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.56 E-value=1.6e-13 Score=111.11 Aligned_cols=127 Identities=15% Similarity=0.092 Sum_probs=88.7
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc------ccH----HHHHHHhhcc-ce
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI------VTW----QFQVGALTKK-YS 92 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~------~~~----~~~~~~l~~~-~~ 92 (320)
..|+..||++|+..++.+.. .++-|+||+.|+++.+.. ..+ ....+.|+++ |.
T Consensus 27 v~i~~rDG~~L~~~v~~P~~----------------~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~ 90 (381)
T d1mpxa2 27 VMIPMRDGVKLHTVIVLPKG----------------AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYI 90 (381)
T ss_dssp EEEECTTSCEEEEEEEEETT----------------CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCE
T ss_pred EEEECCCCCEEEEEEEEeCC----------------CCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCE
Confidence 45666799999998777632 235688999998763211 011 2234667777 99
Q ss_pred EEecCCCCCCCCCCCCCCC---------ChhHHHHHHHHHHHHh------CCCcEEEEEeChhHHHHHHHHHhCcccccc
Q 020916 93 VYIPDLLFFGGSITDEADR---------SPTFQAQCLATGLAKL------GVDKCVLVGFSYGGMVSFKVAELYPNLVQA 157 (320)
Q Consensus 93 vi~~d~~G~G~s~~~~~~~---------~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 157 (320)
|+.+|.||+|.|....... .....++|..++++.+ ..++|.++|+|+||.+++.+|...|..+++
T Consensus 91 vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a 170 (381)
T d1mpxa2 91 RVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKV 170 (381)
T ss_dssp EEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEE
T ss_pred EEEEecCccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccce
Confidence 9999999999998643211 1112345555555433 234799999999999999999999988999
Q ss_pred EEEeccccc
Q 020916 158 MVVSGSILA 166 (320)
Q Consensus 158 lvl~~~~~~ 166 (320)
+|...+...
T Consensus 171 ~v~~~~~~d 179 (381)
T d1mpxa2 171 AVPESPMID 179 (381)
T ss_dssp EEEESCCCC
T ss_pred eeeeccccc
Confidence 998877654
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.55 E-value=3.3e-13 Score=110.17 Aligned_cols=219 Identities=12% Similarity=0.063 Sum_probs=121.9
Q ss_pred HHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhCC--------------------CcEEEEEeChhHH
Q 020916 84 VGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKLGV--------------------DKCVLVGFSYGGM 142 (320)
Q Consensus 84 ~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~~~--------------------~~~~lvGhS~Gg~ 142 (320)
.+.|.++ |.|+.+|.||.|.|.......+.++ .+|..++|+.+.. ++|.++|+|+||.
T Consensus 129 ~~~~~~~GYavv~~D~RG~g~S~G~~~~~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~ 207 (405)
T d1lnsa3 129 NDYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGT 207 (405)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSCSCCCTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHH
T ss_pred hHHHHhCCCEEEEECCCCCCCCCCccccCChhh-hhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHH
Confidence 4567777 9999999999999998765555544 6788888887742 3799999999999
Q ss_pred HHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhccccC--CchhHH----
Q 020916 143 VSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWF--PSCLYK---- 216 (320)
Q Consensus 143 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---- 216 (320)
+++.+|...|..++++|..++........... +.............................. ......
T Consensus 208 ~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~-----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (405)
T d1lnsa3 208 MAYGAATTGVEGLELILAEAGISSWYNYYREN-----GLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLA 282 (405)
T ss_dssp HHHHHHTTTCTTEEEEEEESCCSBHHHHHBSS-----SSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCccceEEEecCccccHHHHhhcC-----Cccccccchhhhhhhhhhccccccccccchhhhchhhhhhccc
Confidence 99999999988899999887766432111000 0000000000000111111000000000000 000000
Q ss_pred HHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhCC-CCeEEEEecCCCcccccC
Q 020916 217 DFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLGA-DHVTFQGIKKAGHLVHLE 295 (320)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~ 295 (320)
...............+ +...+....+.+|++|+|+|+|-.|..+++..+..+.+.+.. ...++++-+ .+|.....
T Consensus 283 ~~~~~~~~~~~~~d~~---w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~~~~~Lilgp-w~H~~~~~ 358 (405)
T d1lnsa3 283 EMTAALDRKSGDYNQF---WHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHR-GAHIYMNS 358 (405)
T ss_dssp HHHHHHCTTTCCCCHH---HHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEES-CSSCCCTT
T ss_pred hhhhhhhhccccchhh---hhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhCCCcEEEEeC-CCCCCCcc
Confidence 0000000000000011 111122245678999999999999999988888888887752 245666666 48975432
Q ss_pred -ChHHHHHHHHHHHHhhh
Q 020916 296 -RPCAYNRCLKQFLASLH 312 (320)
Q Consensus 296 -~~~~~~~~i~~fl~~~~ 312 (320)
...++.+.+.+|++...
T Consensus 359 ~~~~d~~~~~~~wFD~~L 376 (405)
T d1lnsa3 359 WQSIDFSETINAYFVAKL 376 (405)
T ss_dssp BSSCCHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHh
Confidence 22345556666666544
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.46 E-value=5.1e-13 Score=102.30 Aligned_cols=195 Identities=15% Similarity=0.107 Sum_probs=109.4
Q ss_pred CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHH-------HHHHHhhcc--ceEEecCCCC
Q 020916 30 PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQ-------FQVGALTKK--YSVYIPDLLF 100 (320)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~-------~~~~~l~~~--~~vi~~d~~G 100 (320)
+|.++.|+++-|+.-+ .+++-|+|+++||.+++.. .|. .....+... ...+.+...+
T Consensus 32 ~g~~~~~~v~lP~~y~-------------~~~~~Pvvv~lHG~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (255)
T d1jjfa_ 32 TNSTRPARVYLPPGYS-------------KDKKYSVLYLLHGIGGSEN-DWFEGGGRANVIADNLIAEGKIKPLIIVTPN 97 (255)
T ss_dssp TTEEEEEEEEECTTCC-------------TTSCBCEEEEECCTTCCTT-TTTTTTTCHHHHHHHHHHTTSSCCCEEEEEC
T ss_pred CCCEEEEEEEeCCCCC-------------CCCCCcEEEEEecCCCChH-HhhhhhHHHHHHHHHHHhhccCCcceeeecc
Confidence 6888888776553211 1235689999999887665 432 112222211 1111111112
Q ss_pred CCCCCCCCCC---CChhHHHHHHHHHHHHh-----CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccccccccc
Q 020916 101 FGGSITDEAD---RSPTFQAQCLATGLAKL-----GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSIN 172 (320)
Q Consensus 101 ~G~s~~~~~~---~~~~~~~~~l~~~l~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 172 (320)
.+........ ......++++...++.. +.+++.++|+|+||..++.++.++|+++++++.+++.........
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~ 177 (255)
T d1jjfa_ 98 TNAAGPGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNER 177 (255)
T ss_dssp CCCCCTTCSCHHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHH
T ss_pred cccccccccccccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCccccc
Confidence 2222111111 11223344555555442 235699999999999999999999999999998876542110000
Q ss_pred ccccccccccccccccCcCcHHHHHHHHhHhhhccccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcE
Q 020916 173 ETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKKLWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRV 252 (320)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 252 (320)
.. .... ........|+
T Consensus 178 -------------------------------~~-----~~~~----------------------------~~~~~~~~~~ 193 (255)
T d1jjfa_ 178 -------------------------------LF-----PDGG----------------------------KAAREKLKLL 193 (255)
T ss_dssp -------------------------------HC-----TTTT----------------------------HHHHHHCSEE
T ss_pred -------------------------------cc-----ccHH----------------------------HHhhccCCcc
Confidence 00 0000 0001123579
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEecCCCcccccCChHHHHHHHHHHHH
Q 020916 253 HLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLVHLERPCAYNRCLKQFLA 309 (320)
Q Consensus 253 l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 309 (320)
++.+|++|..++. .+.+.+.+. +-+.++.+++++||... -..+.+.+||.
T Consensus 194 ~i~~G~~D~~~~~--~~~~~~~L~~~g~~~~~~~~~~ggH~~~-----~W~~~l~~fl~ 245 (255)
T d1jjfa_ 194 FIACGTNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFN-----VWKPGLWNFLQ 245 (255)
T ss_dssp EEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHH-----HHHHHHHHHHH
T ss_pred eEEeCCCCCCchH--HHHHHHHHHHCCCCEEEEEECCCCcCHH-----HHHHHHHHHHH
Confidence 9999999988654 445555553 24688999999999643 23345566663
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.35 E-value=2.8e-10 Score=88.35 Aligned_cols=106 Identities=17% Similarity=0.118 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCCCCCcc-ccHHH---HHHHhhcc-ceEEecCCCCCCCCCCCCCC---------CC-hhHHHHHHHHHHH
Q 020916 61 PSKPVVVLVHGFAAEGI-VTWQF---QVGALTKK-YSVYIPDLLFFGGSITDEAD---------RS-PTFQAQCLATGLA 125 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~-~~~~~---~~~~l~~~-~~vi~~d~~G~G~s~~~~~~---------~~-~~~~~~~l~~~l~ 125 (320)
+..|+|+++||.+++.. ..|.. +.+.+.+. +.+++++..+.+........ .. ...+++++...|+
T Consensus 32 ~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~ 111 (288)
T d1sfra_ 32 ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQ 111 (288)
T ss_dssp TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHH
T ss_pred CCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHHHH
Confidence 57899999999876432 14432 34556666 88999987765443322111 12 2234566666654
Q ss_pred Hh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 126 KL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 126 ~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
.. +.+++.+.|+|+||..|+.++.++|+++.+++.+++...
T Consensus 112 ~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~ 155 (288)
T d1sfra_ 112 ANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (288)
T ss_dssp HHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred HhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccc
Confidence 42 345799999999999999999999999999999987653
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.34 E-value=2e-11 Score=98.94 Aligned_cols=126 Identities=13% Similarity=0.069 Sum_probs=86.9
Q ss_pred EEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCc--------c---ccHHHHHHHhhcc-ce
Q 020916 25 AVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEG--------I---VTWQFQVGALTKK-YS 92 (320)
Q Consensus 25 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~--------~---~~~~~~~~~l~~~-~~ 92 (320)
.|..+||++|+..++.+.. .++-|+||+.|+++... . .........|+++ |.
T Consensus 32 ~ipmrDG~~L~~~v~~P~~----------------~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~ 95 (385)
T d2b9va2 32 MVPMRDGVKLYTVIVIPKN----------------ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYI 95 (385)
T ss_dssp EEECTTSCEEEEEEEEETT----------------CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCE
T ss_pred EEECCCCCEEEEEEEEcCC----------------CCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcE
Confidence 3666799999998777632 23567888888764211 0 0112344667777 99
Q ss_pred EEecCCCCCCCCCCCCCCCC---------hhHHHHHHHHHHHHh----C--CCcEEEEEeChhHHHHHHHHHhCcccccc
Q 020916 93 VYIPDLLFFGGSITDEADRS---------PTFQAQCLATGLAKL----G--VDKCVLVGFSYGGMVSFKVAELYPNLVQA 157 (320)
Q Consensus 93 vi~~d~~G~G~s~~~~~~~~---------~~~~~~~l~~~l~~~----~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 157 (320)
|+.+|.||+|.|........ ....++|..++++.+ . .++|.++|+|+||.+++.+|...|+.+++
T Consensus 96 vv~~d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a 175 (385)
T d2b9va2 96 RVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKV 175 (385)
T ss_dssp EEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEE
T ss_pred EEEEcCCcccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceE
Confidence 99999999999986532211 011255666565544 1 24799999999999999999998888998
Q ss_pred EEEeccccc
Q 020916 158 MVVSGSILA 166 (320)
Q Consensus 158 lvl~~~~~~ 166 (320)
++...+...
T Consensus 176 ~~~~~~~~d 184 (385)
T d2b9va2 176 AAPESPMVD 184 (385)
T ss_dssp EEEEEECCC
T ss_pred EEEeccccc
Confidence 888776643
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.30 E-value=9.6e-11 Score=89.90 Aligned_cols=125 Identities=19% Similarity=0.162 Sum_probs=83.3
Q ss_pred CCceEEEcC-CCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCC--CccccHHH---HHHHhhcc-ceE
Q 020916 21 VQPHAVEIE-PGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAA--EGIVTWQF---QVGALTKK-YSV 93 (320)
Q Consensus 21 ~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~--~~~~~~~~---~~~~l~~~-~~v 93 (320)
++..+|..+ .|..+.+.+..+ ..|+|+++||.++ +.. .|.. +.+.+... +.|
T Consensus 4 ~e~~~v~s~~~~r~~~~~v~~~--------------------~~pvlylLhG~~g~~~~~-~w~~~~~~~~~~~~~~~iV 62 (267)
T d1r88a_ 4 YENLMVPSPSMGRDIPVAFLAG--------------------GPHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISV 62 (267)
T ss_dssp CEEEEEEETTTTEEEEEEEECC--------------------SSSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEE
T ss_pred eEEEEEecccCCceeeEEEECC--------------------CCCEEEEcCCCCCCCCcc-hhhhccHHHHHHhhCCeEE
Confidence 344444433 566677766653 5699999999765 334 5654 34555555 889
Q ss_pred EecCCCCCC-CCCCC-CCCCCh-hHHHHHHHHHHHHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 94 YIPDLLFFG-GSITD-EADRSP-TFQAQCLATGLAKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 94 i~~d~~G~G-~s~~~-~~~~~~-~~~~~~l~~~l~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+.+|--..+ .+..+ ...... ..+.++|...|+.. +.++..+.|+||||..|+.+|.++|+++++++.+++...
T Consensus 63 V~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~ 141 (267)
T d1r88a_ 63 VAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 141 (267)
T ss_dssp EEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred EEECCCCCcCCccccccccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccC
Confidence 998842211 11111 122234 34566777777653 345799999999999999999999999999999987653
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.28 E-value=3.4e-11 Score=91.41 Aligned_cols=171 Identities=15% Similarity=0.157 Sum_probs=97.9
Q ss_pred CCCCeEEEEcCCCCC--ccccHHHHHHHhhcc----ceEEecCCCCCCC-CCCCCCC-CChhHHHHHHHHHHHHh-----
Q 020916 61 PSKPVVVLVHGFAAE--GIVTWQFQVGALTKK----YSVYIPDLLFFGG-SITDEAD-RSPTFQAQCLATGLAKL----- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~--~~~~~~~~~~~l~~~----~~vi~~d~~G~G~-s~~~~~~-~~~~~~~~~l~~~l~~~----- 127 (320)
.+.|+||++||.+.. .. .+..+-....+. +-++.++....+. ....... ...+.+.+++..+++..
T Consensus 42 ~~~Pvvv~lhG~~~~~~~~-~~~~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~v~~~~~~~~ 120 (246)
T d3c8da2 42 EERPLAVLLDGEFWAQSMP-VWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSD 120 (246)
T ss_dssp CCCCEEEESSHHHHHHTSC-CHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCC
T ss_pred CCCCEEEEeCCcchhccCc-HHHHHHHHHHhCCCCceEEeecccccccccccccCccHHHHHHHHHHhhhHHHHhccccc
Confidence 356899999995422 22 333333333333 2333333221100 0000011 11223345565656553
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccccccccccccccccccccccccccCcCcHHHHHHHHhHhhhcc
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAMTDSINETNLNRLGVSSSSELLLPNSVKGLKALLSVATYKK 207 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (320)
+.+++.++|+|+||..++.++.++|+++++++.+++..........
T Consensus 121 d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~~~~---------------------------------- 166 (246)
T d3c8da2 121 RADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQ---------------------------------- 166 (246)
T ss_dssp CGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTSS----------------------------------
T ss_pred CccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccCCcc----------------------------------
Confidence 2256999999999999999999999999999999986532111000
Q ss_pred ccCCchhHHHHHHHHhcChhhHHHHhhhhhccCCCCCCCCCCCcEEEEecCCCCCCCHHHHHHHHHHhC--CCCeEEEEe
Q 020916 208 LWFPSCLYKDFLEVMFANRKERAELLEGLLISNKDPTVPNFPQRVHLLWGEDDQIFNVELAHNMKEQLG--ADHVTFQGI 285 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~ 285 (320)
......... ..........|+++.+|+.|..+ ....+.+.+.+. +...+++++
T Consensus 167 ---~~~~~~~~~---------------------~~~~~~~~~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g~~~~~~~~ 221 (246)
T d3c8da2 167 ---QEGVLLEKL---------------------KAGEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQV 221 (246)
T ss_dssp ---SCCHHHHHH---------------------HTTSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEE
T ss_pred ---chHHHHHHh---------------------hhhhhhccCCCeEEEecCCCcch-hHHHHHHHHHHHHCCCCEEEEEe
Confidence 000000000 01123445678999999999865 466777887775 346788889
Q ss_pred cCCCccc
Q 020916 286 KKAGHLV 292 (320)
Q Consensus 286 ~~~gH~~ 292 (320)
+| ||..
T Consensus 222 ~G-gH~~ 227 (246)
T d3c8da2 222 DG-GHDA 227 (246)
T ss_dssp SC-CSCH
T ss_pred CC-CCCh
Confidence 97 8953
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.22 E-value=4.6e-09 Score=85.77 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=89.1
Q ss_pred eEEEcCC-CceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHH----------------
Q 020916 24 HAVEIEP-GTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA---------------- 86 (320)
Q Consensus 24 ~~~~~~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~---------------- 86 (320)
.++.+.+ +..|+||....... ....|.||++-|.++++. .+..+.+.
T Consensus 19 Gyl~v~~~~~~lfyw~~~s~~~---------------~~~~Pl~~WlnGGPG~SS-~~g~~~e~GP~~i~~~~~~~~N~~ 82 (421)
T d1wpxa1 19 GYLDVEDEDKHFFFWTFESRND---------------PAKDPVILWLNGGPGCSS-LTGLFFELGPSSIGPDLKPIGNPY 82 (421)
T ss_dssp EEEECTTSCCEEEEEEECCSSC---------------TTTSCEEEEECCTTTBCT-HHHHHHTTSSEEECTTSCEEECTT
T ss_pred eeeecCCCCceEEEEEEEeCCC---------------CCCCCEEEEECCCCcHHH-HHHHHHhcCCcEECCCCccccCCc
Confidence 4677754 56899987664221 246799999999999998 77666531
Q ss_pred -hhccceEEecC-CCCCCCCCCCC-CCCChhHHHHHHHHHHHHh---------CCCcEEEEEeChhHHHHHHHHHhC---
Q 020916 87 -LTKKYSVYIPD-LLFFGGSITDE-ADRSPTFQAQCLATGLAKL---------GVDKCVLVGFSYGGMVSFKVAELY--- 151 (320)
Q Consensus 87 -l~~~~~vi~~d-~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~---------~~~~~~lvGhS~Gg~~a~~~a~~~--- 151 (320)
+.+..+++.+| ..|.|.|-... ...+....++|+.++++.. ...+++|.|-|+||..+-.+|.+.
T Consensus 83 sW~~~anllfiD~PvGtGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~ 162 (421)
T d1wpxa1 83 SWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSH 162 (421)
T ss_dssp CGGGSSEEEEECCSTTSTTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHC
T ss_pred ccccccCEEEEecCCCCCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHc
Confidence 12236899999 55999995433 3355566677776666432 235799999999999998888542
Q ss_pred c---cccccEEEeccccc
Q 020916 152 P---NLVQAMVVSGSILA 166 (320)
Q Consensus 152 p---~~v~~lvl~~~~~~ 166 (320)
. -.++++++.++...
T Consensus 163 ~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 163 KDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp SSCSSCCCEEEEESCCCC
T ss_pred cCCCcceeeeEecCCccc
Confidence 2 24779999887764
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.21 E-value=7.4e-12 Score=94.79 Aligned_cols=103 Identities=18% Similarity=0.084 Sum_probs=74.4
Q ss_pred eEEEEcCCCCCcc--ccHHHHHHHhhcc---ceEEecCCCCCCCCCCCC-CCCChhHHHHHHHHHHHHh--CCCcEEEEE
Q 020916 65 VVVLVHGFAAEGI--VTWQFQVGALTKK---YSVYIPDLLFFGGSITDE-ADRSPTFQAQCLATGLAKL--GVDKCVLVG 136 (320)
Q Consensus 65 ~vv~lhG~~~~~~--~~~~~~~~~l~~~---~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~l~~~l~~~--~~~~~~lvG 136 (320)
|||++||+++++. ..|..+.+.|.+. +.|+++++.....+.... .......+++.+.+.++.. ..+++.+||
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~~~~~v~lVG 86 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYNAMG 86 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEEEEE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccccccceeEEE
Confidence 8999999987643 1577777777653 789999976443321111 1134566677777777643 235799999
Q ss_pred eChhHHHHHHHHHhCcc-ccccEEEecccccc
Q 020916 137 FSYGGMVSFKVAELYPN-LVQAMVVSGSILAM 167 (320)
Q Consensus 137 hS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~ 167 (320)
|||||.++-.++.+.++ .|..+|.++++...
T Consensus 87 hSqGGLiaR~~i~~~~~~~V~~lITLgsPH~G 118 (279)
T d1ei9a_ 87 FSQGGQFLRAVAQRCPSPPMVNLISVGGQHQG 118 (279)
T ss_dssp ETTHHHHHHHHHHHCCSSCEEEEEEESCCTTC
T ss_pred EccccHHHHHHHHHcCCCCcceEEEECCCCCC
Confidence 99999999999999875 59999999987643
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.21 E-value=6.2e-12 Score=97.35 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCCCCCccccHH-HHHH-Hhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh------CCCc
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ-FQVG-ALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL------GVDK 131 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~-~~~~-~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~------~~~~ 131 (320)
.++|++|++|||.++....|. .+.+ .|... ++||++|+...-...-...........+.+..+|+.+ ..++
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~ 147 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPEN 147 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCcce
Confidence 578999999999876663443 3443 45555 9999999974321100000122333344455555432 3478
Q ss_pred EEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 132 CVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 132 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
++|||||+||.+|-.++...+.++.+++.++|+.+.
T Consensus 148 vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 148 VHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred eEEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 999999999999999999988899999999998654
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.20 E-value=6.3e-12 Score=97.49 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCCCCCccccHH-HHHH-Hhhcc-ceEEecCCCCCCCCCC-CCCCCChhHHHHHHHHHHH----HhC--CC
Q 020916 61 PSKPVVVLVHGFAAEGIVTWQ-FQVG-ALTKK-YSVYIPDLLFFGGSIT-DEADRSPTFQAQCLATGLA----KLG--VD 130 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~~~~~-~~~~-~l~~~-~~vi~~d~~G~G~s~~-~~~~~~~~~~~~~l~~~l~----~~~--~~ 130 (320)
.++|++|++|||.++....|. .+.. .|... ++||++|+... .+.. ...........+.+..+|+ ..+ .+
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~-a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~ 146 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKG-SQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHH-HSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccc-cCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 578999999999877663443 3443 45555 99999999742 1110 0000122233444555544 333 46
Q ss_pred cEEEEEeChhHHHHHHHHHhCccccccEEEecccccc
Q 020916 131 KCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILAM 167 (320)
Q Consensus 131 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 167 (320)
+++|||||+||.+|-.++.+. .++.+++.++|+.+.
T Consensus 147 ~vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 147 QVQLIGHSLGAHVAGEAGSRT-PGLGRITGLDPVEAS 182 (337)
T ss_dssp GEEEEEETHHHHHHHHHHHTS-TTCCEEEEESCCCTT
T ss_pred heEEEeecHHHhhhHHHHHhh-ccccceeccCCCccc
Confidence 899999999999998666554 579999999988754
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.13 E-value=6e-10 Score=86.00 Aligned_cols=105 Identities=18% Similarity=0.128 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCCC--CccccHHH---HHHHhhcc-ceEEecCCCCCCC-CCCC--------CCCCCh-hHHHHHHHHHH
Q 020916 61 PSKPVVVLVHGFAA--EGIVTWQF---QVGALTKK-YSVYIPDLLFFGG-SITD--------EADRSP-TFQAQCLATGL 124 (320)
Q Consensus 61 ~~~~~vv~lhG~~~--~~~~~~~~---~~~~l~~~-~~vi~~d~~G~G~-s~~~--------~~~~~~-~~~~~~l~~~l 124 (320)
++.|+|+|+||.++ +.. .|.. +.+.+.+. +.|+.+|-...+. +... ...... ..++++|...|
T Consensus 27 ~~~p~lyllhG~~g~~d~~-~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i 105 (280)
T d1dqza_ 27 GGPHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWL 105 (280)
T ss_dssp CSSSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHH
T ss_pred CCCCEEEECCCCCCCCccc-hhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHH
Confidence 36799999999865 344 5654 34556666 8999998432211 1100 111223 33567777777
Q ss_pred HHh---CCCcEEEEEeChhHHHHHHHHHhCccccccEEEeccccc
Q 020916 125 AKL---GVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSILA 166 (320)
Q Consensus 125 ~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 166 (320)
+.. +.+++.+.|+||||..|+.+|.++|+++.+++.+++...
T Consensus 106 ~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~ 150 (280)
T d1dqza_ 106 QANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp HHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred HHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccC
Confidence 653 445789999999999999999999999999999987753
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.12 E-value=2.7e-10 Score=87.36 Aligned_cols=46 Identities=13% Similarity=0.122 Sum_probs=31.6
Q ss_pred CCCCcEEEEecCC--------CCCCCHHHHHHHHHHhC--CCCeEEEEecCCCccc
Q 020916 247 NFPQRVHLLWGED--------DQIFNVELAHNMKEQLG--ADHVTFQGIKKAGHLV 292 (320)
Q Consensus 247 ~~~~P~l~i~g~~--------D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~ 292 (320)
....|+++.+|+. |..++....+.+.+.+. +.++++.++||++|..
T Consensus 194 ~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~ 249 (265)
T d2gzsa1 194 FCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGP 249 (265)
T ss_dssp TTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHH
T ss_pred cCCCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcch
Confidence 3456788888877 45556667777776664 3478999999999963
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=4e-08 Score=81.05 Aligned_cols=127 Identities=18% Similarity=0.160 Sum_probs=89.7
Q ss_pred eEEEcCCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccccHHHHHHH-----------------
Q 020916 24 HAVEIEPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIVTWQFQVGA----------------- 86 (320)
Q Consensus 24 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~----------------- 86 (320)
.+++++++..|.||....... ..+.|.++++.|.++++. .|..+.+.
T Consensus 24 Gyl~~~~~~~lffw~~~s~~~---------------~~~~Pl~~wlnGGPG~SS-~~g~~~e~GP~~v~~~~~~~~~N~~ 87 (452)
T d1ivya_ 24 GYLKSSGSKHLHYWFVESQKD---------------PENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPY 87 (452)
T ss_dssp EEEECSTTEEEEEEEECCSSC---------------GGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTT
T ss_pred eeeecCCCceEEEEEEEcCCC---------------CCCCCEEEEECCCCcHHH-HHHHHHccCCcEEcCCCCeeccCCc
Confidence 457787888999988765321 136899999999999998 77665431
Q ss_pred -hhccceEEecCCC-CCCCCCCCCCC--CChhHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhC----
Q 020916 87 -LTKKYSVYIPDLL-FFGGSITDEAD--RSPTFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELY---- 151 (320)
Q Consensus 87 -l~~~~~vi~~d~~-G~G~s~~~~~~--~~~~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~---- 151 (320)
+.+..+++.+|.| |.|.|...... .+....+.|+.+++... ...+++|.|-|+||..+-.+|...
T Consensus 88 SW~~~anllfIDqPvGtGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~ 167 (452)
T d1ivya_ 88 SWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDP 167 (452)
T ss_dssp CGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCT
T ss_pred chhcccCEEEEecCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcC
Confidence 1223689999975 99998654432 34455566665555332 345899999999999998888642
Q ss_pred ccccccEEEeccccc
Q 020916 152 PNLVQAMVVSGSILA 166 (320)
Q Consensus 152 p~~v~~lvl~~~~~~ 166 (320)
.-.++++++.++...
T Consensus 168 ~i~l~Gi~igng~~d 182 (452)
T d1ivya_ 168 SMNLQGLAVGNGLSS 182 (452)
T ss_dssp TSCEEEEEEESCCSB
T ss_pred cccccceEcCCCccC
Confidence 225889999888764
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.95 E-value=5.8e-08 Score=74.81 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=64.9
Q ss_pred CCCeEEEEcCCCCCccccHHHH--HHHh-hcc-ceEEecCCCCC----------------CCCCCCCC-------CCCh-
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQ--VGAL-TKK-YSVYIPDLLFF----------------GGSITDEA-------DRSP- 113 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~--~~~l-~~~-~~vi~~d~~G~----------------G~s~~~~~-------~~~~- 113 (320)
.-|+|.++||.+++.. .|... +..+ .+. ..|+.++.... +.+-.... ....
T Consensus 48 ~yPVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~ 126 (299)
T d1pv1a_ 48 RIPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMY 126 (299)
T ss_dssp TBCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHH
T ss_pred CCCEEEEcCCCCCCHH-HHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchH
Confidence 4689999999999887 77542 2233 333 66777764321 11111000 0112
Q ss_pred hHHHHHHHHHHHHh-CC---------CcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 114 TFQAQCLATGLAKL-GV---------DKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 114 ~~~~~~l~~~l~~~-~~---------~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
+.+.+++...|+.. .. ++..|.||||||.-|+.+|.++ |++..++...++..
T Consensus 127 ~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~ 190 (299)
T d1pv1a_ 127 DYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIV 190 (299)
T ss_dssp HHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcC
Confidence 33456777776653 21 4689999999999999999764 78888888777654
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.94 E-value=3.8e-09 Score=81.84 Aligned_cols=47 Identities=19% Similarity=0.292 Sum_probs=39.2
Q ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHHhC----CCCeEEEEecCCCccccc
Q 020916 248 FPQRVHLLWGEDDQIFNVELAHNMKEQLG----ADHVTFQGIKKAGHLVHL 294 (320)
Q Consensus 248 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~~gH~~~~ 294 (320)
...|+++++|++|..|++..++.+.+.+. ..+++++..+++||.+.-
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT 139 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPT 139 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEE
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCC
Confidence 35799999999999999999999888875 235778888999998753
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.75 E-value=4.6e-08 Score=74.88 Aligned_cols=99 Identities=14% Similarity=0.012 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCCCCccccH-------HHHHHHh----hc-cceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHH---
Q 020916 62 SKPVVVLVHGFAAEGIVTW-------QFQVGAL----TK-KYSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAK--- 126 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~-------~~~~~~l----~~-~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~--- 126 (320)
+-|+|+++||.+++.. .| ..+...+ .. .+.|+.++..+.+.... .........+...++.
T Consensus 54 ~yPvl~~lhG~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 128 (273)
T d1wb4a1 54 KYNIFYLMHGGGENEN-TIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQ----NFYQEFRQNVIPFVESKYS 128 (273)
T ss_dssp CCEEEEEECCTTCCTT-STTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCTT----THHHHHHHTHHHHHHHHSC
T ss_pred CceEEEEEeCCCCCcc-hhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCccc----cchhcccccccchhhhhhh
Confidence 4689999999887654 22 1222222 22 27777887765432211 1112222222222221
Q ss_pred ------------hCCCcEEEEEeChhHHHHHHHHHhCccccccEEEecccc
Q 020916 127 ------------LGVDKCVLVGFSYGGMVSFKVAELYPNLVQAMVVSGSIL 165 (320)
Q Consensus 127 ------------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 165 (320)
.+.+++.+.|+|+||..++.+|.++|+++.+++.+++..
T Consensus 129 ~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 129 TYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp CSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred hhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 234579999999999999999999999999999988765
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.67 E-value=2.1e-06 Score=70.89 Aligned_cols=104 Identities=16% Similarity=0.106 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCCCCccccHHHHHHH-----------------hhccceEEecCCC-CCCCCCCCCC----------CCCh
Q 020916 62 SKPVVVLVHGFAAEGIVTWQFQVGA-----------------LTKKYSVYIPDLL-FFGGSITDEA----------DRSP 113 (320)
Q Consensus 62 ~~~~vv~lhG~~~~~~~~~~~~~~~-----------------l~~~~~vi~~d~~-G~G~s~~~~~----------~~~~ 113 (320)
+.|.||++-|.++++. .+..+.+. +.+..+++.+|.| |.|.|-.... ..+.
T Consensus 66 ~~Pl~lWlnGGPGcSS-~~g~f~E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~ 144 (483)
T d1ac5a_ 66 DRPLIIWLNGGPGCSS-MDGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDL 144 (483)
T ss_dssp SCCEEEEECCTTTBCT-HHHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSH
T ss_pred CCCEEEEECCCCcHHH-HHHHHHccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCH
Confidence 3599999999999998 76555421 1223689999965 8999864321 2344
Q ss_pred hHHHHHHHHHHHHh-------CCCcEEEEEeChhHHHHHHHHHhCc------------cccccEEEeccccc
Q 020916 114 TFQAQCLATGLAKL-------GVDKCVLVGFSYGGMVSFKVAELYP------------NLVQAMVVSGSILA 166 (320)
Q Consensus 114 ~~~~~~l~~~l~~~-------~~~~~~lvGhS~Gg~~a~~~a~~~p------------~~v~~lvl~~~~~~ 166 (320)
++.++++..+++.. ...+++|.|-|+||..+-.+|...- -.++++.+.++...
T Consensus 145 ~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T d1ac5a_ 145 EDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccC
Confidence 55666666666542 3357999999999999988885421 14788888777654
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.64 E-value=4.8e-08 Score=77.31 Aligned_cols=99 Identities=21% Similarity=0.201 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCCCCCcc------ccHHH----HHHHhhcc-ceEEecCCCCCCCCCCCCCCCChhHHHHHHHHHHHHh--
Q 020916 61 PSKPVVVLVHGFAAEGI------VTWQF----QVGALTKK-YSVYIPDLLFFGGSITDEADRSPTFQAQCLATGLAKL-- 127 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~~~------~~~~~----~~~~l~~~-~~vi~~d~~G~G~s~~~~~~~~~~~~~~~l~~~l~~~-- 127 (320)
.++-||||+||+.+-.. ..|.. +.+.|.+. ++|++...... .+.++.++.+...|+..
T Consensus 5 ~~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~---------~S~~~RA~eL~~~I~~~~~ 75 (388)
T d1ku0a_ 5 ANDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL---------SSNWDRACEAYAQLVGGTV 75 (388)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS---------BCHHHHHHHHHHHHHCEEE
T ss_pred CCCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc---------cCHHHHHHHHHHHHhhhhh
Confidence 36678999999864311 14543 66778777 99999887533 35567788888888643
Q ss_pred --C-------------------------CCcEEEEEeChhHHHHHHHHHhCcc-------------------------cc
Q 020916 128 --G-------------------------VDKCVLVGFSYGGMVSFKVAELYPN-------------------------LV 155 (320)
Q Consensus 128 --~-------------------------~~~~~lvGhS~Gg~~a~~~a~~~p~-------------------------~v 155 (320)
+ ..|++||||||||..+-.++...|+ .|
T Consensus 76 d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V 155 (388)
T d1ku0a_ 76 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFV 155 (388)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcce
Confidence 1 1489999999999999988875443 69
Q ss_pred ccEEEeccccccc
Q 020916 156 QAMVVSGSILAMT 168 (320)
Q Consensus 156 ~~lvl~~~~~~~~ 168 (320)
++|+.++++....
T Consensus 156 ~SvTTIsTPH~GS 168 (388)
T d1ku0a_ 156 LSVTTIATPHDGT 168 (388)
T ss_dssp EEEEEESCCTTCC
T ss_pred EEEEeccCCCCCc
Confidence 9999999876543
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.95 E-value=2.3e-05 Score=65.58 Aligned_cols=120 Identities=15% Similarity=0.055 Sum_probs=71.7
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCC---Ccc-ccHHHHHHHhhcc-ceEEecCCC----
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAA---EGI-VTWQFQVGALTKK-YSVYIPDLL---- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~---~~~-~~~~~~~~~l~~~-~~vi~~d~~---- 99 (320)
+|-..|.+|.+.. ...+.|++|+|||.+. +.. ..+.. ...+.++ .-||.+++|
T Consensus 89 EDCL~LnI~~P~~-----------------~~~~lPV~v~ihGG~~~~g~~~~~~~~~-~~~~~~~~vvvVt~nYRlg~~ 150 (532)
T d1ea5a_ 89 EDCLYLNIWVPSP-----------------RPKSTTVMVWIYGGGFYSGSSTLDVYNG-KYLAYTEEVVLVSLSYRVGAF 150 (532)
T ss_dssp SCCCEEEEEECSS-----------------CCSSEEEEEEECCSTTTCCCTTCGGGCT-HHHHHHHTCEEEECCCCCHHH
T ss_pred ccCCEEEEEeCCC-----------------CCCCCcEEEEEEcCCcccccCCccccCc-chhhcccCccEEEEeeccccc
Confidence 3666777776543 1236799999999752 222 12222 2223333 899999998
Q ss_pred CCCCCC---CCCCCCChhHHHHHHHHHHHH---hC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEeccccc
Q 020916 100 FFGGSI---TDEADRSPTFQAQCLATGLAK---LG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILA 166 (320)
Q Consensus 100 G~G~s~---~~~~~~~~~~~~~~l~~~l~~---~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~ 166 (320)
|+-... .....+.+.++...|..+-+. .| .++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 151 GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 151 GFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp HHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cccccccccCCCCcccchhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 332221 122334555555444444443 34 45799999999999887776532 236889998876653
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.93 E-value=1.4e-05 Score=66.00 Aligned_cols=105 Identities=20% Similarity=0.118 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCCCCC---ccccHHH-HHHHhhcc-ceEEecCCC----CCCCCCC----CCCCCChhHHHHHHHHHHH--
Q 020916 61 PSKPVVVLVHGFAAE---GIVTWQF-QVGALTKK-YSVYIPDLL----FFGGSIT----DEADRSPTFQAQCLATGLA-- 125 (320)
Q Consensus 61 ~~~~~vv~lhG~~~~---~~~~~~~-~~~~l~~~-~~vi~~d~~----G~G~s~~----~~~~~~~~~~~~~l~~~l~-- 125 (320)
.+.|++|+|||.+.. .. .+.. ....+.+. .-|+.+++| |+-.... ....+.+.++...|..+-+
T Consensus 94 ~~lPV~v~ihGG~~~~g~~~-~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI 172 (483)
T d1qe3a_ 94 QNLPVMVWIHGGAFYLGAGS-EPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENI 172 (483)
T ss_dssp CSEEEEEEECCSTTTSCCTT-SGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred CCCceEEEEeecccccCCcc-ccccccccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHH
Confidence 357999999998632 22 2222 22233344 889999998 3321111 1123445555444444333
Q ss_pred -HhC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEeccccc
Q 020916 126 -KLG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILA 166 (320)
Q Consensus 126 -~~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~ 166 (320)
..| .++|.|+|||.||..+..++... ...++++|+.++...
T Consensus 173 ~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 173 SAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred HHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 334 45799999999999988776532 236889999887653
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91 E-value=2.5e-05 Score=65.30 Aligned_cols=120 Identities=14% Similarity=0.068 Sum_probs=70.6
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCC---ccccHHHHHHHhh-c-cceEEecCCC----
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAE---GIVTWQFQVGALT-K-KYSVYIPDLL---- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~---~~~~~~~~~~~l~-~-~~~vi~~d~~---- 99 (320)
+|-..|.+|.+... ..+.|++|+|||.+.. .. ....-...+. + ..-|+.+++|
T Consensus 87 EDCL~lnI~~P~~~-----------------~~~~PV~v~ihGG~~~~gs~~-~~~~~~~~~~~~~~vVvVt~nYRlg~~ 148 (526)
T d1p0ia_ 87 EDCLYLNVWIPAPK-----------------PKNATVLIWIYGGGFQTGTSS-LHVYDGKFLARVERVIVVSMNYRVGAL 148 (526)
T ss_dssp SCCCEEEEEEESSC-----------------CSSEEEEEEECCSTTTSCCTT-CGGGCTHHHHHHHCCEEEEECCCCHHH
T ss_pred CcCCEEEEEeCCCC-----------------CCCCceEEEEECCCcccccCc-ccccCccccccccceeEEecccccccc
Confidence 36677777776531 2356999999997632 22 2211112232 2 3889999988
Q ss_pred CCCCC-C--CCCCCCChhHHHHHHHHHHH---HhC--CCcEEEEEeChhHHHHHHHHHh--CccccccEEEeccccc
Q 020916 100 FFGGS-I--TDEADRSPTFQAQCLATGLA---KLG--VDKCVLVGFSYGGMVSFKVAEL--YPNLVQAMVVSGSILA 166 (320)
Q Consensus 100 G~G~s-~--~~~~~~~~~~~~~~l~~~l~---~~~--~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~ 166 (320)
|+-.. . .....+.+.++...|..+-+ ..| .++|.|+|+|.||..+..++.. ....+.++|+.++...
T Consensus 149 Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 149 GFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp HHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cccCCCCcccccccccccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 22221 1 11233455555444444433 344 4579999999999998766542 2346888888876653
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.90 E-value=2.1e-05 Score=66.03 Aligned_cols=120 Identities=15% Similarity=0.053 Sum_probs=71.8
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCC---Ccc-ccHHHHHHHhh-cc-ceEEecCCC---
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAA---EGI-VTWQFQVGALT-KK-YSVYIPDLL--- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~---~~~-~~~~~~~~~l~-~~-~~vi~~d~~--- 99 (320)
+|-..|.+|.+... .....|++|+|||.+. +.. ..+.. ..+. ++ .-|+.+++|
T Consensus 94 EDCL~LnI~~P~~~----------------~~~~lPV~v~ihGG~~~~gs~~~~~~~~--~~~~~~~~vvvVt~nYRlg~ 155 (542)
T d2ha2a1 94 EDCLYLNVWTPYPR----------------PASPTPVLIWIYGGGFYSGAASLDVYDG--RFLAQVEGAVLVSMNYRVGT 155 (542)
T ss_dssp SCCCEEEEEEESSC----------------CSSCEEEEEEECCSTTTCCCTTSGGGCT--HHHHHHHCCEEEEECCCCHH
T ss_pred CcCCEEEEEecCCC----------------CCCCCcEEEEEEECccccccCcccccCc--hhhhhhccceeEeeeeeccc
Confidence 36677777775431 1135699999999763 222 12222 2232 23 889999999
Q ss_pred -CCCCCC---CCCCCCChhHHHHHHHHHHH---HhC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEeccccc
Q 020916 100 -FFGGSI---TDEADRSPTFQAQCLATGLA---KLG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILA 166 (320)
Q Consensus 100 -G~G~s~---~~~~~~~~~~~~~~l~~~l~---~~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~ 166 (320)
|+-.+. .....+.+.++...|..+-+ ..| .++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 156 ~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 156 FGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp HHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred eeeecccccccCCCcCCcccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 442222 11223445555444444433 344 45799999999999998776542 236888898887543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.84 E-value=4.5e-05 Score=63.76 Aligned_cols=120 Identities=18% Similarity=0.151 Sum_probs=73.2
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCC---ccccHHHHHHHhhcc-ceEEecCCC----C
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAE---GIVTWQFQVGALTKK-YSVYIPDLL----F 100 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~---~~~~~~~~~~~l~~~-~~vi~~d~~----G 100 (320)
+|-..|.+|.+..... ....|++|+|||.+.. .. .+.. ...+..+ .-||.+++| |
T Consensus 94 EDCL~LnI~~P~~~~~---------------~~~lPV~v~ihGG~~~~gs~~-~~~~-~~~~~~~~vIvVt~nYRLg~~G 156 (532)
T d2h7ca1 94 EDCLYLNIYTPADLTK---------------KNRLPVMVWIHGGGLMVGAAS-TYDG-LALAAHENVVVVTIQYRLGIWG 156 (532)
T ss_dssp SCCCEEEEEECSCTTS---------------CCCEEEEEEECCSTTTSCCST-TSCC-HHHHHHHTCEEEEECCCCHHHH
T ss_pred CcCCEEEEEECCCCCC---------------CCCcEEEEEEeCCcccccccc-cCCc-hhhhhcCceEEEEEeeccCCCc
Confidence 4778888988743211 1356999999997642 22 3322 2233344 889999998 3
Q ss_pred CCCCCCC--CCCCChhHHHHHHHHHHH---HhC--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEecccc
Q 020916 101 FGGSITD--EADRSPTFQAQCLATGLA---KLG--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSIL 165 (320)
Q Consensus 101 ~G~s~~~--~~~~~~~~~~~~l~~~l~---~~~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~ 165 (320)
+-.+... ...+.+.++...|..+-+ ..| .++|.|+|+|.||..+..++... ...++++|+.++..
T Consensus 157 Fl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 157 FFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp HCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cccccccccccccccHHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 3222211 223445555444444433 344 45799999999999888776532 23688889888654
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=97.72 E-value=3.5e-05 Score=64.17 Aligned_cols=123 Identities=16% Similarity=0.092 Sum_probs=69.8
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCC---Ccc-ccHHHHHHHhhccceEEecCCCC----
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAA---EGI-VTWQFQVGALTKKYSVYIPDLLF---- 100 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~---~~~-~~~~~~~~~l~~~~~vi~~d~~G---- 100 (320)
+|-..|.+|.+..... +...|++|+|||.+. +.. ..+......-.+..-|+.+++|=
T Consensus 78 EDCL~LnI~~P~~~~~---------------~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~G 142 (517)
T d1ukca_ 78 EDCLFINVFKPSTATS---------------QSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALG 142 (517)
T ss_dssp SCCCEEEEEEETTCCT---------------TCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHH
T ss_pred CcCCEEEEEeCCCCCC---------------CCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEeccccee
Confidence 3667777777543111 124599999999763 222 12222222222227889999982
Q ss_pred CCCCCC----CCCCCChhHHHHHHHHHHHH---hC--CCcEEEEEeChhHHHHHHHHHh----CccccccEEEeccccc
Q 020916 101 FGGSIT----DEADRSPTFQAQCLATGLAK---LG--VDKCVLVGFSYGGMVSFKVAEL----YPNLVQAMVVSGSILA 166 (320)
Q Consensus 101 ~G~s~~----~~~~~~~~~~~~~l~~~l~~---~~--~~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lvl~~~~~~ 166 (320)
+-.+.. ....+.+.++...|..+-+. .| .++|.|+|+|.||..+...+.. ....+.++|+.++...
T Consensus 143 Fl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 143 FLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred ecCccccccccccchhHHHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 211110 11234455554444444343 34 4579999999999988655433 1236899999887543
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=97.71 E-value=7.5e-05 Score=62.55 Aligned_cols=122 Identities=17% Similarity=0.089 Sum_probs=72.8
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCccc--cH--HHH-HHHhh-cc-ceEEecCCC--
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGIV--TW--QFQ-VGALT-KK-YSVYIPDLL-- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~~--~~--~~~-~~~l~-~~-~~vi~~d~~-- 99 (320)
+|-..|.+|.+.... .....|++|+|||.+..... .+ ..+ ...|+ .. .-|+.+++|
T Consensus 103 EDCL~LnI~~P~~~~---------------~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg 167 (544)
T d1thga_ 103 EDCLYLNVFRPAGTK---------------PDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTG 167 (544)
T ss_dssp SCCCEEEEEEETTCC---------------TTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCH
T ss_pred CcCCEEEEEECCCCC---------------CCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccc
Confidence 477889998864311 11356999999998743320 11 222 23343 33 899999998
Q ss_pred --CCCCCCC----CCCCCChhHHHHHHHHHHH---HhC--CCcEEEEEeChhHHHHHHHHHh--------CccccccEEE
Q 020916 100 --FFGGSIT----DEADRSPTFQAQCLATGLA---KLG--VDKCVLVGFSYGGMVSFKVAEL--------YPNLVQAMVV 160 (320)
Q Consensus 100 --G~G~s~~----~~~~~~~~~~~~~l~~~l~---~~~--~~~~~lvGhS~Gg~~a~~~a~~--------~p~~v~~lvl 160 (320)
|+-.+.. ....+.+.++...|..+-+ ..| .++|.|+|+|.||..+..++.. ....++++|+
T Consensus 168 ~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~ 247 (544)
T d1thga_ 168 PFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAIL 247 (544)
T ss_dssp HHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEE
T ss_pred cccccCCchhhccccccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccc
Confidence 3322111 1223445555444444433 334 4579999999999877666542 1247899999
Q ss_pred ecccc
Q 020916 161 SGSIL 165 (320)
Q Consensus 161 ~~~~~ 165 (320)
.++..
T Consensus 248 qSG~~ 252 (544)
T d1thga_ 248 QSGGP 252 (544)
T ss_dssp ESCCC
T ss_pred ccccc
Confidence 88764
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.66 E-value=7e-05 Score=62.58 Aligned_cols=122 Identities=19% Similarity=0.070 Sum_probs=70.7
Q ss_pred CCCceeeEeccCcccccCCCCcceEEEeeccCCCCCeEEEEcCCCCCcc--ccH--HHHH-HH-hhcc-ceEEecCCC--
Q 020916 29 EPGTTMNFWVPRETIEKPKKGEKIIEKEALKKPSKPVVVLVHGFAAEGI--VTW--QFQV-GA-LTKK-YSVYIPDLL-- 99 (320)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~lhG~~~~~~--~~~--~~~~-~~-l~~~-~~vi~~d~~-- 99 (320)
+|-..|.+|.+.... ...+.|++|+|||.+.... ..| ..+. .. +..+ .-||.+++|
T Consensus 95 EDCL~LnI~~P~~~~---------------~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg 159 (534)
T d1llfa_ 95 EDCLTINVVRPPGTK---------------AGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVA 159 (534)
T ss_dssp SCCCEEEEEECTTCC---------------TTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCH
T ss_pred CcCCEEEEEECCCCC---------------CCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCC
Confidence 477889998875321 1246799999999874221 022 2333 22 3334 899999999
Q ss_pred --CCCCCC----CCCCCCChhHHHHHHHHHH---HHhC--CCcEEEEEeChhHHHHHHHHH-hC----c---cccccEEE
Q 020916 100 --FFGGSI----TDEADRSPTFQAQCLATGL---AKLG--VDKCVLVGFSYGGMVSFKVAE-LY----P---NLVQAMVV 160 (320)
Q Consensus 100 --G~G~s~----~~~~~~~~~~~~~~l~~~l---~~~~--~~~~~lvGhS~Gg~~a~~~a~-~~----p---~~v~~lvl 160 (320)
|+-... .......+.++...|..+- ...| .++|.|+|+|.||..+...+. .. | ..++++|+
T Consensus 160 ~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~ 239 (534)
T d1llfa_ 160 SWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIM 239 (534)
T ss_dssp HHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEE
T ss_pred cccccCCcccccccccccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhh
Confidence 222111 1122334444444433333 3334 457999999999996654443 21 1 25888998
Q ss_pred ecccc
Q 020916 161 SGSIL 165 (320)
Q Consensus 161 ~~~~~ 165 (320)
.++..
T Consensus 240 qSGs~ 244 (534)
T d1llfa_ 240 QSGAM 244 (534)
T ss_dssp ESCCS
T ss_pred ccCcc
Confidence 88654
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.44 E-value=0.00022 Score=60.17 Aligned_cols=104 Identities=15% Similarity=0.076 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCCC---cc-ccHH----HHHHHhhcc--ceEEecCCC----CCCCCC--CCCCCCChhHHHHHHHHHHH
Q 020916 62 SKPVVVLVHGFAAE---GI-VTWQ----FQVGALTKK--YSVYIPDLL----FFGGSI--TDEADRSPTFQAQCLATGLA 125 (320)
Q Consensus 62 ~~~~vv~lhG~~~~---~~-~~~~----~~~~~l~~~--~~vi~~d~~----G~G~s~--~~~~~~~~~~~~~~l~~~l~ 125 (320)
+.|++|+|||.+.. +. ..+. .-...|+.. .-|+.+++| |+-.+. .....+.+.++...|..+-+
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~ 176 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhh
Confidence 46899999997632 11 0010 011233332 889999998 332211 11234555565555544444
Q ss_pred H---hC--CCcEEEEEeChhHHHHHHHHHh--CccccccEEEecccc
Q 020916 126 K---LG--VDKCVLVGFSYGGMVSFKVAEL--YPNLVQAMVVSGSIL 165 (320)
Q Consensus 126 ~---~~--~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 165 (320)
. .| .++|.|+|||.||..+..++.. ....++++|+.++..
T Consensus 177 nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 177 NIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred hhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 4 34 4579999999999988876643 234689999988654
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.24 E-value=0.00028 Score=59.37 Aligned_cols=104 Identities=13% Similarity=-0.021 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCCC---Ccc-ccHHHHHHHhh-cc-ceEEecCCC----CCCCC---------CCCCCCCChhHHHHHHH
Q 020916 61 PSKPVVVLVHGFAA---EGI-VTWQFQVGALT-KK-YSVYIPDLL----FFGGS---------ITDEADRSPTFQAQCLA 121 (320)
Q Consensus 61 ~~~~~vv~lhG~~~---~~~-~~~~~~~~~l~-~~-~~vi~~d~~----G~G~s---------~~~~~~~~~~~~~~~l~ 121 (320)
...|++|+|||.+. +.. ..|. ...|. +. .-|+++++| |+-.. ......+.+.++...|.
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~--~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYN--ADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGC--CHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccc--hhhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 45699999999763 222 1222 22333 33 777889988 22110 11112344555554444
Q ss_pred HHHHHh---C--CCcEEEEEeChhHHHHHHHHHhC--ccccccEEEeccccc
Q 020916 122 TGLAKL---G--VDKCVLVGFSYGGMVSFKVAELY--PNLVQAMVVSGSILA 166 (320)
Q Consensus 122 ~~l~~~---~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~~~ 166 (320)
.+-+.+ | .++|.|+|+|.||..+..++... ...+.++|+.++...
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 443333 3 45799999999999888666532 235788888776543
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.59 E-value=0.0018 Score=48.21 Aligned_cols=30 Identities=20% Similarity=0.183 Sum_probs=22.5
Q ss_pred HHHHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 121 ATGLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 121 ~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
.++++.....++++.|||+||.+|..++..
T Consensus 123 ~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 123 LDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 333444455689999999999999988754
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.57 E-value=0.0025 Score=47.25 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=21.4
Q ss_pred HHHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 123 GLAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 123 ~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
+++.....++++.|||+||.+|..++..
T Consensus 118 ~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 118 QASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 3333344579999999999999988755
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.56 E-value=0.0019 Score=47.99 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=21.0
Q ss_pred HHHhCCCcEEEEEeChhHHHHHHHHHh
Q 020916 124 LAKLGVDKCVLVGFSYGGMVSFKVAEL 150 (320)
Q Consensus 124 l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 150 (320)
++.....++++.|||+||.+|..+|..
T Consensus 127 ~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 127 LTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HhhCCCceEEEEecccchHHHHHHHHH
Confidence 333344589999999999999988854
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.45 E-value=0.0025 Score=47.53 Aligned_cols=26 Identities=19% Similarity=0.218 Sum_probs=20.9
Q ss_pred HhCCCcEEEEEeChhHHHHHHHHHhC
Q 020916 126 KLGVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 126 ~~~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
.....++++.|||+||.+|..++...
T Consensus 134 ~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 134 EHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred hCCCcceeeeccchHHHHHHHHHHHH
Confidence 33445899999999999999988653
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.43 E-value=0.0019 Score=48.19 Aligned_cols=24 Identities=29% Similarity=0.216 Sum_probs=19.9
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhC
Q 020916 128 GVDKCVLVGFSYGGMVSFKVAELY 151 (320)
Q Consensus 128 ~~~~~~lvGhS~Gg~~a~~~a~~~ 151 (320)
...++++.|||+||.+|..++...
T Consensus 135 ~~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 135 PNYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred CCceEEEeccchHHHHHHHHHHHH
Confidence 345799999999999999888653
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=95.75 E-value=0.059 Score=37.97 Aligned_cols=75 Identities=17% Similarity=0.032 Sum_probs=42.9
Q ss_pred ceEEecCCCCCCCCCCCC-CCC--C----hhHHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhC------------
Q 020916 91 YSVYIPDLLFFGGSITDE-ADR--S----PTFQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELY------------ 151 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~~~~-~~~--~----~~~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~------------ 151 (320)
..+..+++|..-...... ..| + .....+.+.+..++-...+++|+|+|.|+.++-.++...
T Consensus 36 ~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~ 115 (207)
T d1qoza_ 36 TTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAV 115 (207)
T ss_dssp EEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSC
T ss_pred CeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHhccCccccccccCCC
Confidence 456778888643221111 111 1 112233333333343456899999999999998886421
Q ss_pred ------ccccccEEEecccc
Q 020916 152 ------PNLVQAMVVSGSIL 165 (320)
Q Consensus 152 ------p~~v~~lvl~~~~~ 165 (320)
.++|.++++++-+.
T Consensus 116 ~l~~~~~~~V~avvl~GdP~ 135 (207)
T d1qoza_ 116 PLTAGAVSAVKAAIFMGDPR 135 (207)
T ss_dssp CSCHHHHHHEEEEEEESCTT
T ss_pred CCChhhhhcEEEEEEEeCCC
Confidence 13578888886443
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=95.56 E-value=0.02 Score=40.11 Aligned_cols=50 Identities=14% Similarity=0.074 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHhCc----cccccEEEeccc
Q 020916 115 FQAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAELYP----NLVQAMVVSGSI 164 (320)
Q Consensus 115 ~~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~ 164 (320)
.+.+.+.+..+.-...+++|+|+|.|+.++-.++...+ ++|.++++++-+
T Consensus 81 ~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 81 EMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 34445555555555579999999999999998887653 478888888754
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=95.24 E-value=0.1 Score=36.69 Aligned_cols=75 Identities=23% Similarity=0.166 Sum_probs=42.3
Q ss_pred ceEEecCCCCCCCCC-CCCCCC--ChhH----HHHHHHHHHHHhCCCcEEEEEeChhHHHHHHHHHh-------------
Q 020916 91 YSVYIPDLLFFGGSI-TDEADR--SPTF----QAQCLATGLAKLGVDKCVLVGFSYGGMVSFKVAEL------------- 150 (320)
Q Consensus 91 ~~vi~~d~~G~G~s~-~~~~~~--~~~~----~~~~l~~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~------------- 150 (320)
..+..+++|...... .....| +... ..+.+.+..++-...+++|+|+|.|+.++-.++..
T Consensus 36 ~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~ 115 (207)
T d1g66a_ 36 STAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAV 115 (207)
T ss_dssp CEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSC
T ss_pred CeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcEEEEeeccccHHHHHHHhccCCcccccccccc
Confidence 567778888532211 111111 1111 22333333333345689999999999999887642
Q ss_pred -----CccccccEEEecccc
Q 020916 151 -----YPNLVQAMVVSGSIL 165 (320)
Q Consensus 151 -----~p~~v~~lvl~~~~~ 165 (320)
..++|.++++++-+.
T Consensus 116 ~l~~~~~~~v~avvl~GdP~ 135 (207)
T d1g66a_ 116 QLSSSAVNMVKAAIFMGDPM 135 (207)
T ss_dssp CSCHHHHHHEEEEEEESCTT
T ss_pred CCCchhhhceeeEEEecCCC
Confidence 113577777777543
|