Citrus Sinensis ID: 020963

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHccccccEEEEEEEEcccccccHHHHHHHccccccEEEccccccccccccccccccHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHccccEEEccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEccccccccHHHHHHHHHccccEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHHHHHHHcccccEEEEEcccccccccccHHHHHHHcEcccEEEcccccccccccccccccccHHHHHHHHHccccccccEEEEEcccccccHHHHHHHHHHcccccEEEEEcHHHHHHHcccccEcccccccccccHHHHHHHHHHHccccccccEEEEEccHHHHccHHHHHHHHHccccEEEEcccccccccccccccccccccEccccEEccHHHHEEHHHccEEcccHHHHHHccccccccEEEEEcccccHHHHHHHHHHHcccccEEEcccHHHHHccccccccEccc
Coil and Loop (DISEMBL)
msslaagrradystlsvspkepvvsVDWLhanlrepdlkvldaswympdeqrnpfqeyqvahipgalffdvdgvadrttnlphmlpsEEAFAAAVSALGlenkdglvvydgKGIFSAARVWWMFRVFGHDrvwvldgglprwrasgydvessasGDAILKASAASEAIEKVYqgqvvgpttfqtkfqphLIWTLEQVKRNIEEGTYQLVDarskarfdgdapeprkgirsghvpgskcipfpqmldasqtllpaDELKKRFEQegislekpvvtaCGTGVTACILALGLnrlgkhdvavydgswtewgaqpdtpvetss
Flexible Loop (DISEMBL)
msslaagrradystlsvspkepvVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQlvdarskarfdgdapeprkgirsghvpGSKCIPFPQMLDASQTLLPADELKKRFEQEGislekpvvtacGTGVTACILALGLNRLGKHDVAVYDGSwtewgaqpdtpvetss
Low Complexity Region (SEG)
MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS
Disordered region (IsUnstruct)
**********************VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE*****DAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVD****************************************************QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG***********
Disordered Region (DISOPRED)
********************EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV****
Disordered Region (DISEMBL)
******************PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG*********DAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ*********
Disordered Region (DISPRO)
********************EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
O64530	379	Thiosulfate/3-mercaptopyr	yes	no	0.993	0.836	0.798	1e-156
Q24JL3	342	Thiosulfate/3-mercaptopyr	no	no	0.993	0.926	0.733	1e-141
P25325	297	3-mercaptopyruvate sulfur	yes	no	0.827	0.888	0.412	1e-59
P97532	297	3-mercaptopyruvate sulfur	yes	no	0.843	0.905	0.412	7e-59
Q99J99	297	3-mercaptopyruvate sulfur	yes	no	0.843	0.905	0.406	2e-58
P58388	281	3-mercaptopyruvate sulfur	N/A	no	0.849	0.964	0.391	3e-56
P31142	281	3-mercaptopyruvate sulfur	N/A	no	0.849	0.964	0.391	3e-56
P46635	297	Thiosulfate sulfurtransfe	no	no	0.849	0.912	0.413	4e-54
P24329	297	Thiosulfate sulfurtransfe	no	no	0.849	0.912	0.410	1e-53
P52196	297	Thiosulfate sulfurtransfe	no	no	0.849	0.912	0.410	5e-53

>sp|O64530|STR1_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial OS=Arabidopsis thaliana GN=STR1 PE=1 SV=1

 Score =  552 bits (1423), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 253/317 (79%), Positives = 285/317 (89%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S     +A YST SVS  EPVVSVDWLHANLREPDLK+LDASWYMPDEQRNP QEYQV
Sbjct: 58  MASTGVETKAGYSTSSVSTSEPVVSVDWLHANLREPDLKILDASWYMPDEQRNPIQEYQV 117

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIP ALFFD+DG++DR T+LPHMLP+EEAFAA  SALG++NKD +VVYDGKGIFSAARV
Sbjct: 118 AHIPRALFFDLDGISDRKTSLPHMLPTEEAFAAGCSALGIDNKDEVVVYDGKGIFSAARV 177

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQGQ V P 
Sbjct: 178 WWMFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGQTVSPI 237

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKFQPHL+WTL+QVK N+E+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKCIP
Sbjct: 238 TFQTKFQPHLVWTLDQVKNNMEDPTYQHIDARSKARFDGTAPEPRKGIRSGHIPGSKCIP 297

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           FPQM D+  TLLPA+ELKKRF+QE ISL+KP++ +CGTGVTACILA+GL+RLGK DV +Y
Sbjct: 298 FPQMFDSCNTLLPAEELKKRFDQEDISLDKPIMASCGTGVTACILAMGLHRLGKTDVPIY 357

Query: 301 DGSWTEWGAQPDTPVET 317
           DGSWTEW  QPD P+E+
Sbjct: 358 DGSWTEWATQPDLPIES 374

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 2

>sp|Q24JL3|STR2_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 2 OS=Arabidopsis thaliana GN=STR2 PE=1 SV=1

 Score =  503 bits (1294), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 234/319 (73%), Positives = 273/319 (85%), Gaps = 2/319 (0%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S  +  +A+Y+ +S +  EPVVSVDWLH+NL + D+KVLDASWYM  EQRNP QEYQV
Sbjct: 25  MASSGSEAKANYAPISTN--EPVVSVDWLHSNLGDADIKVLDASWYMAHEQRNPIQEYQV 82

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFD++G+ADR TNL HMLPSEEAFAA  SALG+EN DG+VVYDG G+FSAARV
Sbjct: 83  AHIPGALFFDLNGIADRKTNLRHMLPSEEAFAAGCSALGIENNDGVVVYDGMGLFSAARV 142

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGHD+VWVLDGGLP+WRASGYDVESS S DAILKASAA+EAIEK+YQGQ + P 
Sbjct: 143 WWMFRVFGHDKVWVLDGGLPKWRASGYDVESSVSNDAILKASAATEAIEKIYQGQTISPI 202

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKF+PHL+  L+QVK NIE+ TYQ +DARSKARFDG APEP KG+ SGH+PGSKC+P
Sbjct: 203 TFQTKFRPHLVLALDQVKENIEDKTYQHIDARSKARFDGIAPEPWKGLPSGHIPGSKCVP 262

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           FP M D+SQTLLPA+ELKK+FEQE ISL+ P+  +CGTGVTACILALGL RLGK +VA+Y
Sbjct: 263 FPLMFDSSQTLLPAEELKKQFEQEDISLDSPIAASCGTGVTACILALGLYRLGKTNVAIY 322

Query: 301 DGSWTEWGAQPDTPVETSS 319
           DGSWTEW   P+ P+  SS
Sbjct: 323 DGSWTEWATAPNLPIVGSS 341

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P25325|THTM_HUMAN 3-mercaptopyruvate sulfurtransferase OS=Homo sapiens GN=MPST PE=1 SV=3

 Score =  230 bits (586), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 120/291 (41%), Positives = 161/291 (55%), Gaps = 27/291 (9%)

Query: 23  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct: 10  LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 136
           +   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 129

Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GGL  W      + S  S  A                     P  F+ +  P  I T E 
Sbjct: 130 GGLRHWLRQNLPLSSGKSQPA---------------------PAEFRAQLDPAFIKTYED 168

Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 256
           +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         +E
Sbjct: 169 IKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEE 228

Query: 257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
           ++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV +YDGSW EW
Sbjct: 229 IRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEW 279

Transfer of a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P97532|THTM_RAT 3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus GN=Mpst PE=1 SV=3

 Score =  227 bits (579), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 123/298 (41%), Positives = 167/298 (56%), Gaps = 29/298 (9%)

Query: 23  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct: 10  LVSAQWVAEALKSPRASQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 136
           +   HMLPS   FA    +LG+     +V+YDG  +G++SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPSATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHSVSLLD 129

Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W +    + S  S          SE            P  F  +  P  I T E 
Sbjct: 130 GGFRYWLSQNLPISSGKS---------PSE------------PAEFCAQLDPSFIKTHED 168

Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 256
           +  N++   +Q+VDAR+  RF G  PEPR GI  GH+PGS  IPF + L +       +E
Sbjct: 169 ILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTSEGLEKSPEE 228

Query: 257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPD 312
           +++ F+++ + L KP+V  CG+GVTAC + LG    GK DV VYDGSW EW   AQP+
Sbjct: 229 IQRLFQEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKPDVPVYDGSWVEWYMRAQPE 286

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|Q99J99|THTM_MOUSE 3-mercaptopyruvate sulfurtransferase OS=Mus musculus GN=Mpst PE=1 SV=3

 Score =  226 bits (575), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/298 (40%), Positives = 162/298 (54%), Gaps = 29/298 (9%)

Query: 23  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct: 10  LVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 136
           +   HMLP+   FA    +LG+     +V+YDG  +G +SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPNATHFADYAGSLGVSAATHVVIYDGSDQGPYSAPRVWWMFRAFGHHSVSLLD 129

Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W      + S  S                        P  F  +  P  I T E 
Sbjct: 130 GGFRHWLNQNLPISSGKSHSE---------------------PAEFSAQLDPSFIKTHED 168

Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 256
           +  N++   +Q+VDAR+  RF G  PEPR GI  GH+PGS  IPF + L         +E
Sbjct: 169 ILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEE 228

Query: 257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPD 312
           +K+ F+++ + L KP+V  CG+GVTAC + LG    GK DV VYDGSW EW   AQP+
Sbjct: 229 IKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPE 286

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P58388|THTM_ECO57 3-mercaptopyruvate sulfurtransferase OS=Escherichia coli O157:H7 GN=sseA PE=3 SV=2

 Score =  219 bits (557), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 115/294 (39%), Positives = 166/294 (56%), Gaps = 23/294 (7%)

Query: 24  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 82
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 66

Query: 83  HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 142
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 126

Query: 143 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 202
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 127 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 165

Query: 203 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 262
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 166 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 224

Query: 263 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 316
             G+S +KP++ +CG+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE
Sbjct: 225 GRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 278

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity.

Escherichia coli O157:H7 (taxid: 83334)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P31142|THTM_ECOLI 3-mercaptopyruvate sulfurtransferase OS=Escherichia coli (strain K12) GN=sseA PE=1 SV=3

 Score =  218 bits (556), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 115/294 (39%), Positives = 166/294 (56%), Gaps = 23/294 (7%)

Query: 24  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 82
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 66

Query: 83  HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 142
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 126

Query: 143 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 202
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 127 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 165

Query: 203 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 262
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 166 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 224

Query: 263 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 316
             G+S +KP++ +CG+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE
Sbjct: 225 GRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 278

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity (130-fold lower). Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity.

Escherichia coli (strain K12) (taxid: 83333)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P46635|THTR_CRIGR Thiosulfate sulfurtransferase OS=Cricetulus griseus GN=TST PE=2 SV=2

 Score =  211 bits (538), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/302 (41%), Positives = 162/302 (53%), Gaps = 31/302 (10%)

Query: 23  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGSLGPGLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 136
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFADYVGSLGISNDTHVVVYDGDNLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAVFKATLDRSLLKTYEQ 167

Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPR-KGIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           V  N++   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLQSKRFQLVDSRAQGRYLGTEPEPDIVGLDSGHIRGSANMPFMNFLTEDGFEKSPE 227

Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ--PDT 313
           EL+  F+ + + L +P++  C  GVTAC +AL     GK DVAVYDGSW+EW  Q  P+T
Sbjct: 228 ELRAIFQDKKVDLSQPLIATCRKGVTACHIALAAYLCGKPDVAVYDGSWSEWFHQAPPET 287

Query: 314 PV 315
            V
Sbjct: 288 RV 289

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification. Binds molecular oxygen and sulfur.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P24329|THTR_RAT Thiosulfate sulfurtransferase OS=Rattus norvegicus GN=Tst PE=1 SV=3

 Score =  210 bits (534), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/302 (41%), Positives = 160/302 (52%), Gaps = 31/302 (10%)

Query: 23  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGKVGPSLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 136
           +    MLPSE  F   V  LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFGDYVGNLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAVFKATLNRSLLKTYEQ 167

Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           V  N++   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLQSKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNVPFMNFLTEDGFEKSPE 227

Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPDT 313
           EL+  F+ + + L +P++  C  GVTAC +AL     GK DVAVYDGSW+EW   A P+T
Sbjct: 228 ELRAIFQDKKVDLSQPLIATCRKGVTACHIALAAYLCGKPDVAVYDGSWSEWFRRAPPET 287

Query: 314 PV 315
            V
Sbjct: 288 RV 289

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Involved in the formation of iron-sulfur complexes, cyanide detoxification or modification of sulfur-containing enzymes. Other thiol compounds, besides cyanide, can act as sulfur ion acceptors. Also has weak mercaptopyruvate sulfurtransferase (MST) activity.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P52196|THTR_MOUSE Thiosulfate sulfurtransferase OS=Mus musculus GN=Tst PE=1 SV=3

 Score =  208 bits (529), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/302 (41%), Positives = 160/302 (52%), Gaps = 31/302 (10%)

Query: 23  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGRLGPSLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 136
           +    MLPSE  F   V  LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFGDYVGNLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAVFKATLNLSLLKTYEQ 167

Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPR-KGIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           V  N++   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLQSKRFQLVDSRAQGRYLGTQPEPDIVGLDSGHIRGSVNMPFMDFLTKDGFEKSPE 227

Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPDT 313
           EL+  F+ + + L +P++  C  GVTAC +AL     GK DVAVYDGSW+EW   A P+T
Sbjct: 228 ELRAIFQDKKVDLSQPLIATCRKGVTACHVALAAYLCGKPDVAVYDGSWSEWFRRAPPET 287

Query: 314 PV 315
            V
Sbjct: 288 RV 289

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
388492146	384	unknown [Lotus japonicus]	0.996	0.828	0.871	1e-164
255544614	376	thiosulfate sulfertansferase, putative [	0.996	0.845	0.864	1e-163
118484746	372	unknown [Populus trichocarpa]	0.978	0.838	0.878	1e-163
225465012	380	PREDICTED: 3-mercaptopyruvate sulfurtran	1.0	0.839	0.849	1e-162
224096608	372	predicted protein [Populus trichocarpa]	0.978	0.838	0.875	1e-162
4406372	375	thiosulfate sulfurtransferase [Datisca g	0.993	0.845	0.851	1e-161
356525750	379	PREDICTED: 3-mercaptopyruvate sulfurtran	0.996	0.839	0.849	1e-160
449497667	377	PREDICTED: thiosulfate/3-mercaptopyruvat	1.0	0.846	0.818	1e-158
350539791	371	mercaptopyruvate sulfurtransferase-like	0.987	0.849	0.841	1e-157
449464498	377	PREDICTED: thiosulfate/3-mercaptopyruvat	1.0	0.846	0.815	1e-157

>gi|388492146|gb|AFK34139.1| unknown [Lotus japonicus]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 277/318 (87%), Positives = 295/318 (92%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S   GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QEYQV
Sbjct: 62  MASSIVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDMKVLDASWYMPDEQRNPIQEYQV 121

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFDVDG+ADRTTNLPHMLPSEEAFAAAVSALG++NKD +VVYDGKG+FSAARV
Sbjct: 122 AHIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDVVVYDGKGLFSAARV 181

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVYQGQ VGP 
Sbjct: 182 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPI 241

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKFQPHL+WTL+QVK+NIEE T+Q +DARSK RFDG APEPRKGIRSGHVPGSKCIP
Sbjct: 242 TFQTKFQPHLVWTLDQVKKNIEEKTHQQLDARSKPRFDGAAPEPRKGIRSGHVPGSKCIP 301

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           F Q+LD SQTLLPA ELKKRFEQEGISLE PVVT+CGTGVTACILALGL+RLGK DVAVY
Sbjct: 302 FSQLLDGSQTLLPAAELKKRFEQEGISLESPVVTSCGTGVTACILALGLHRLGKSDVAVY 361

Query: 301 DGSWTEWGAQPDTPVETS 318
           DGSWTEWGAQ DTPVET+
Sbjct: 362 DGSWTEWGAQSDTPVETT 379

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544614|ref|XP_002513368.1| thiosulfate sulfertansferase, putative [Ricinus communis] gi|223547276|gb|EEF48771.1| thiosulfate sulfertansferase, putative [Ricinus communis]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/318 (86%), Positives = 296/318 (93%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           ++S   G +A YST S+   EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNP QEYQV
Sbjct: 59  IASTMVGTKASYSTQSLPANEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPIQEYQV 118

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFDVDG++DR+TNLPHMLPSEEAF+AAVSALG+ENKDGLVVYDGKGIFSAARV
Sbjct: 119 AHIPGALFFDVDGISDRSTNLPHMLPSEEAFSAAVSALGIENKDGLVVYDGKGIFSAARV 178

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVY GQ VGP 
Sbjct: 179 WWMFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYHGQAVGPI 238

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKFQ HL+WTLEQVK+NIE+ T+Q +DARSKARFDG APEPRKGIRSGHVPGSKCIP
Sbjct: 239 TFQTKFQLHLVWTLEQVKKNIEDRTHQHIDARSKARFDGAAPEPRKGIRSGHVPGSKCIP 298

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           FPQMLDASQTLLPADELKKRF+QEGISLE PV T+CGTGVTACILALG++RLGK DV VY
Sbjct: 299 FPQMLDASQTLLPADELKKRFDQEGISLESPVFTSCGTGVTACILALGMHRLGKQDVPVY 358

Query: 301 DGSWTEWGAQPDTPVETS 318
           DGSWTEWGA PDTPV+TS
Sbjct: 359 DGSWTEWGAHPDTPVDTS 376

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484746|gb|ABK94242.1| unknown [Populus trichocarpa]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/312 (87%), Positives = 297/312 (95%)

Query: 7   GRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA 66
           G RA++ST S+S  EPVVSVDWLHANLREPD+KVLDASWYMPDEQRNP QEYQVAHIPGA
Sbjct: 61  GTRANFSTQSLSLNEPVVSVDWLHANLREPDMKVLDASWYMPDEQRNPIQEYQVAHIPGA 120

Query: 67  LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV 126
           LFFDVDG+AD+TTNLPHMLPSEEAFAAAVSALG+ENKDGLVVYDGKGIFSAARVWWMFRV
Sbjct: 121 LFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFRV 180

Query: 127 FGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF 186
           FGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ VGP T+QTKF
Sbjct: 181 FGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITYQTKF 240

Query: 187 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD 246
           QPHL+WTLEQVK NIE+ T+Q VDARSKARFDG APEPRKGI+SGHVPGSKCIPF Q+LD
Sbjct: 241 QPHLVWTLEQVKSNIEDRTHQHVDARSKARFDGAAPEPRKGIKSGHVPGSKCIPFAQLLD 300

Query: 247 ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTE 306
           +SQTLLPADELKKRF+QEGISL+ PVVT+CGTGVTACILALGL+RLGK DVAVYDGSWTE
Sbjct: 301 SSQTLLPADELKKRFDQEGISLKSPVVTSCGTGVTACILALGLHRLGKSDVAVYDGSWTE 360

Query: 307 WGAQPDTPVETS 318
           WGA P+TPV++S
Sbjct: 361 WGANPETPVDSS 372

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465012|ref|XP_002264748.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase [Vitis vinifera] gi|147820684|emb|CAN69823.1| hypothetical protein VITISV_030676 [Vitis vinifera] gi|297736153|emb|CBI24191.3| unnamed protein product [Vitis vinifera]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 271/319 (84%), Positives = 295/319 (92%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S  +G R+ +ST SVSP EPVVSVDWLHAN+REPDLKVLDASWYMPDEQRNP QEYQV
Sbjct: 59  MASSTSGTRSSFSTQSVSPNEPVVSVDWLHANIREPDLKVLDASWYMPDEQRNPLQEYQV 118

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFDVDG++D+TTNLPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARV
Sbjct: 119 AHIPGALFFDVDGISDQTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARV 178

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGH+R+WVLDGGLP WRASG+DVESSASGDAILKASAASEAIEKVY+ Q VGP 
Sbjct: 179 WWMFRVFGHERIWVLDGGLPTWRASGFDVESSASGDAILKASAASEAIEKVYRRQAVGPI 238

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQT+FQPHL+WTLEQV +NIE  T+Q +DARSKARFDG APEPRKGIRSGHVP SKCIP
Sbjct: 239 TFQTRFQPHLVWTLEQVNQNIENKTHQHIDARSKARFDGIAPEPRKGIRSGHVPSSKCIP 298

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           F QMLD+SQ LLPADELKKRF+QEGISL+ PVVT+CGTGVTACILALGL+RLGK DV VY
Sbjct: 299 FSQMLDSSQKLLPADELKKRFDQEGISLDSPVVTSCGTGVTACILALGLHRLGKSDVTVY 358

Query: 301 DGSWTEWGAQPDTPVETSS 319
           DGSWTEWGA PDTPV TSS
Sbjct: 359 DGSWTEWGAHPDTPVATSS 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096608|ref|XP_002310670.1| predicted protein [Populus trichocarpa] gi|222853573|gb|EEE91120.1| predicted protein [Populus trichocarpa]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 273/312 (87%), Positives = 296/312 (94%)

Query: 7   GRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA 66
           G RA++ST S+S  EPVV VDWLHANLREPD+KVLDASWYMPDEQRNP QEYQVAHIPGA
Sbjct: 61  GTRANFSTQSLSLNEPVVFVDWLHANLREPDMKVLDASWYMPDEQRNPIQEYQVAHIPGA 120

Query: 67  LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV 126
           LFFDVDG+AD+TTNLPHMLPSEEAFAAAVSALG+ENKDGLVVYDGKGIFSAARVWWMFRV
Sbjct: 121 LFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFRV 180

Query: 127 FGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF 186
           FGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ VGP T+QTKF
Sbjct: 181 FGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITYQTKF 240

Query: 187 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD 246
           QPHL+WTLEQVK NIE+ T+Q VDARSKARFDG APEPRKGI+SGHVPGSKCIPF Q+LD
Sbjct: 241 QPHLVWTLEQVKSNIEDRTHQHVDARSKARFDGAAPEPRKGIKSGHVPGSKCIPFAQLLD 300

Query: 247 ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTE 306
           +SQTLLPADELKKRF+QEGISL+ PVVT+CGTGVTACILALGL+RLGK DVAVYDGSWTE
Sbjct: 301 SSQTLLPADELKKRFDQEGISLKSPVVTSCGTGVTACILALGLHRLGKSDVAVYDGSWTE 360

Query: 307 WGAQPDTPVETS 318
           WGA P+TPV++S
Sbjct: 361 WGANPETPVDSS 372

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4406372|gb|AAD19957.1| thiosulfate sulfurtransferase [Datisca glomerata]

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/317 (85%), Positives = 290/317 (91%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S  AG R ++ST S+   EPVVS DWLH+NL+EPDL+VLDASWYMPDEQRNP QEYQV
Sbjct: 59  MASSVAGTRLEFSTQSLPTNEPVVSADWLHSNLKEPDLRVLDASWYMPDEQRNPLQEYQV 118

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFDVDG++DRTT LPHMLPSEEAFAAAVSALG++NKDGLVVYDGKGIFSAARV
Sbjct: 119 AHIPGALFFDVDGISDRTTKLPHMLPSEEAFAAAVSALGIQNKDGLVVYDGKGIFSAARV 178

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGHDRVWVLDGGLPRWRA+GYDVESSAS DAILKASAASE IEK+YQGQ  GP 
Sbjct: 179 WWMFRVFGHDRVWVLDGGLPRWRAAGYDVESSASSDAILKASAASEVIEKIYQGQAAGPI 238

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKFQP+LIW LEQVK+NIEE TYQ VDARSK RFDG  PEPRKGIRSGHVPGSKCIP
Sbjct: 239 TFQTKFQPNLIWGLEQVKKNIEEKTYQHVDARSKPRFDGAVPEPRKGIRSGHVPGSKCIP 298

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           FPQ+LDASQ LLPADELKKRF+QEGISLE P+VT+CGTGVTACILALGL+RLGK DVAVY
Sbjct: 299 FPQILDASQALLPADELKKRFDQEGISLESPIVTSCGTGVTACILALGLHRLGKSDVAVY 358

Query: 301 DGSWTEWGAQPDTPVET 317
           DGSWTEWGA  DTPVET
Sbjct: 359 DGSWTEWGAHSDTPVET 375

Source: Datisca glomerata

Species: Datisca glomerata

Genus: Datisca

Family: Datiscaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525750|ref|XP_003531486.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase-like [Glycine max]

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 270/318 (84%), Positives = 292/318 (91%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S + GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QEYQV
Sbjct: 62  MASSSVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDIKVLDASWYMPDEQRNPIQEYQV 121

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFDVDG+ADRTT LPHMLPSEEAFAAAVSALG+ENKD LVVYDGKG+FSAARV
Sbjct: 122 AHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIENKDDLVVYDGKGLFSAARV 181

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVY+GQ VGP 
Sbjct: 182 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYKGQTVGPL 241

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKFQPHL+W ++QVK+NIE+ T+Q +DARSK RFDG   EPRKGIRSGHVPGSKCIP
Sbjct: 242 TFQTKFQPHLVWNIDQVKKNIEDKTHQHIDARSKPRFDGAVQEPRKGIRSGHVPGSKCIP 301

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           F Q+LD+SQTLLPADELKKRFEQEGIS+E P VT+CGTGVTACILALGL+RLGK DVAVY
Sbjct: 302 FAQLLDSSQTLLPADELKKRFEQEGISVESPAVTSCGTGVTACILALGLHRLGKSDVAVY 361

Query: 301 DGSWTEWGAQPDTPVETS 318
           DGSWTEWGAQ DT V+TS
Sbjct: 362 DGSWTEWGAQSDTLVDTS 379

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449497667|ref|XP_004160468.1| PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial-like [Cucumis sativus]

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 261/319 (81%), Positives = 292/319 (91%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S  AG +A +S+ S+S  +P+VS DWLH+NL+EPDLKVLDASWYMPDEQRNP QEYQV
Sbjct: 59  MASSVAGAKAHFSSKSLSTDDPIVSPDWLHSNLKEPDLKVLDASWYMPDEQRNPIQEYQV 118

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFDVDGV+DRT+ LPHMLPSEEAFAA VSALG+ NKDG+VVYDGKG+FSAARV
Sbjct: 119 AHIPGALFFDVDGVSDRTSKLPHMLPSEEAFAAVVSALGISNKDGVVVYDGKGLFSAARV 178

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGHDR+WVLDGGLP+WR  GYDVESSASGDAILKA+AASEAIEK+YQGQ VGP 
Sbjct: 179 WWMFRVFGHDRIWVLDGGLPKWRTLGYDVESSASGDAILKATAASEAIEKIYQGQAVGPI 238

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKFQPHL+W LE+V+ NI E T+QL+DARSKARFDG   EPRKGIRSGHVPGSKCIP
Sbjct: 239 TFQTKFQPHLVWDLEKVQENITERTHQLIDARSKARFDGAVLEPRKGIRSGHVPGSKCIP 298

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           FPQMLD+SQ+LLPAD+LKKRFEQEGISLE P+VT+CGTGVTACILALGL+RLGKHDV VY
Sbjct: 299 FPQMLDSSQSLLPADQLKKRFEQEGISLENPIVTSCGTGVTACILALGLHRLGKHDVPVY 358

Query: 301 DGSWTEWGAQPDTPVETSS 319
           DGSWTEWGA  DTPV+T+S
Sbjct: 359 DGSWTEWGAHSDTPVDTAS 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350539791|ref|NP_001234274.1| mercaptopyruvate sulfurtransferase-like protein [Solanum lycopersicum] gi|224579301|gb|ACN58228.1| mercaptopyruvate sulfurtransferase-like protein [Solanum lycopersicum]

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 265/315 (84%), Positives = 286/315 (90%)

Query: 4   LAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHI 63
           + + R A +ST SVS  EPVVSVDWLHANL++P +KVLDASWYMP+EQRNP QEYQVAHI
Sbjct: 55  MNSSRLATFSTQSVSSNEPVVSVDWLHANLKQPHIKVLDASWYMPNEQRNPLQEYQVAHI 114

Query: 64  PGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWM 123
           PGALFFDVDG++DRTTNLPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARVWWM
Sbjct: 115 PGALFFDVDGISDRTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWM 174

Query: 124 FRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQ 183
           FRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ Q V P TF 
Sbjct: 175 FRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQRQAVAPITFL 234

Query: 184 TKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQ 243
           TKFQPHL+WTL QV +NIEE TYQ +DARSKARFDG APEPRKGIRSGHVPGSKCIPF Q
Sbjct: 235 TKFQPHLVWTLNQVWKNIEETTYQHIDARSKARFDGVAPEPRKGIRSGHVPGSKCIPFSQ 294

Query: 244 MLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGS 303
           MLD SQTLL  +ELKK+F+QEGISL+KP+VT+CGTGVTACILALGL+RLGK DV VYDGS
Sbjct: 295 MLDGSQTLLSNEELKKKFDQEGISLDKPIVTSCGTGVTACILALGLHRLGKTDVPVYDGS 354

Query: 304 WTEWGAQPDTPVETS 318
           WTEWG  PD PV TS
Sbjct: 355 WTEWGGHPDVPVSTS 369

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464498|ref|XP_004149966.1| PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial-like [Cucumis sativus]

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 260/319 (81%), Positives = 291/319 (91%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S  AG +A +S+ S+S  +P+VS DWLH+NL+EPDLKVLDASWYMPDEQRNP QEYQV
Sbjct: 59  MASSVAGAKAHFSSKSLSTDDPIVSPDWLHSNLKEPDLKVLDASWYMPDEQRNPIQEYQV 118

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFDVDGV+DRT+ LPHMLPSEEAFAA VSALG+ NKDG+VVYDGKG+FSAARV
Sbjct: 119 AHIPGALFFDVDGVSDRTSKLPHMLPSEEAFAAVVSALGISNKDGVVVYDGKGLFSAARV 178

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGHDR+WVLDGGLP+WR  GYDVESSASGDAILKA+AASEAIEK+YQGQ VGP 
Sbjct: 179 WWMFRVFGHDRIWVLDGGLPKWRTLGYDVESSASGDAILKATAASEAIEKIYQGQAVGPI 238

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKFQ HL+W LE+V+ NI E T+QL+DARSKARFDG   EPRKGIRSGHVPGSKCIP
Sbjct: 239 TFQTKFQSHLVWDLEKVQENITERTHQLIDARSKARFDGAVLEPRKGIRSGHVPGSKCIP 298

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           FPQMLD+SQ+LLPAD+LKKRFEQEGISLE P+VT+CGTGVTACILALGL+RLGKHDV VY
Sbjct: 299 FPQMLDSSQSLLPADQLKKRFEQEGISLENPIVTSCGTGVTACILALGLHRLGKHDVPVY 358

Query: 301 DGSWTEWGAQPDTPVETSS 319
           DGSWTEWGA  DTPV+T+S
Sbjct: 359 DGSWTEWGAHSDTPVDTAS 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
TAIR|locus:2207345	379	MST1 "mercaptopyruvate sulfurt	0.993	0.836	0.798	2e-143
TAIR|locus:2032800	342	RDH2 "rhodanese homologue 2" [	0.993	0.926	0.733	2.8e-130
UNIPROTKB|Q608D7	316	sseA "Sulfurtransferase" [Meth	0.426	0.430	0.518	1.1e-70
UNIPROTKB|E1C8D8	293	MPST "Sulfurtransferase" [Gall	0.404	0.440	0.496	1.8e-62
UNIPROTKB|H9L016	267	H9L016 "Sulfurtransferase" [Ga	0.351	0.419	0.535	5.4e-61
ZFIN|ZDB-GENE-030131-9020	302	zgc:162544 "zgc:162544" [Danio	0.514	0.543	0.421	1.1e-60
UNIPROTKB|J3KPV7	317	MPST "Sulfurtransferase" [Homo	0.420	0.422	0.433	4.2e-59
UNIPROTKB|P25325	297	MPST "3-mercaptopyruvate sulfu	0.420	0.451	0.433	4.2e-59
UNIPROTKB|E2RJF7	298	MPST "Sulfurtransferase" [Cani	0.473	0.506	0.433	1.1e-58
RGD|620065	297	Mpst "mercaptopyruvate sulfurt	0.420	0.451	0.441	1.4e-58

TAIR|locus:2207345 MST1 "mercaptopyruvate sulfurtransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1402 (498.6 bits), Expect = 2.0e-143, P = 2.0e-143
 Identities = 253/317 (79%), Positives = 285/317 (89%)

Query:     1 MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
             M+S     +A YST SVS  EPVVSVDWLHANLREPDLK+LDASWYMPDEQRNP QEYQV
Sbjct:    58 MASTGVETKAGYSTSSVSTSEPVVSVDWLHANLREPDLKILDASWYMPDEQRNPIQEYQV 117

Query:    61 AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
             AHIP ALFFD+DG++DR T+LPHMLP+EEAFAA  SALG++NKD +VVYDGKGIFSAARV
Sbjct:   118 AHIPRALFFDLDGISDRKTSLPHMLPTEEAFAAGCSALGIDNKDEVVVYDGKGIFSAARV 177

Query:   121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
             WWMFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQGQ V P 
Sbjct:   178 WWMFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGQTVSPI 237

Query:   181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
             TFQTKFQPHL+WTL+QVK N+E+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKCIP
Sbjct:   238 TFQTKFQPHLVWTLDQVKNNMEDPTYQHIDARSKARFDGTAPEPRKGIRSGHIPGSKCIP 297

Query:   241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
             FPQM D+  TLLPA+ELKKRF+QE ISL+KP++ +CGTGVTACILA+GL+RLGK DV +Y
Sbjct:   298 FPQMFDSCNTLLPAEELKKRFDQEDISLDKPIMASCGTGVTACILAMGLHRLGKTDVPIY 357

Query:   301 DGSWTEWGAQPDTPVET 317
             DGSWTEW  QPD P+E+
Sbjct:   358 DGSWTEWATQPDLPIES 374

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0007568 "aging" evidence=ISS

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IDA

GO:0016783 "sulfurtransferase activity" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2032800 RDH2 "rhodanese homologue 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
 Identities = 234/319 (73%), Positives = 273/319 (85%)

Query:     1 MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
             M+S  +  +A+Y+ +S +  EPVVSVDWLH+NL + D+KVLDASWYM  EQRNP QEYQV
Sbjct:    25 MASSGSEAKANYAPISTN--EPVVSVDWLHSNLGDADIKVLDASWYMAHEQRNPIQEYQV 82

Query:    61 AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
             AHIPGALFFD++G+ADR TNL HMLPSEEAFAA  SALG+EN DG+VVYDG G+FSAARV
Sbjct:    83 AHIPGALFFDLNGIADRKTNLRHMLPSEEAFAAGCSALGIENNDGVVVYDGMGLFSAARV 142

Query:   121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
             WWMFRVFGHD+VWVLDGGLP+WRASGYDVESS S DAILKASAA+EAIEK+YQGQ + P 
Sbjct:   143 WWMFRVFGHDKVWVLDGGLPKWRASGYDVESSVSNDAILKASAATEAIEKIYQGQTISPI 202

Query:   181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
             TFQTKF+PHL+  L+QVK NIE+ TYQ +DARSKARFDG APEP KG+ SGH+PGSKC+P
Sbjct:   203 TFQTKFRPHLVLALDQVKENIEDKTYQHIDARSKARFDGIAPEPWKGLPSGHIPGSKCVP 262

Query:   241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
             FP M D+SQTLLPA+ELKK+FEQE ISL+ P+  +CGTGVTACILALGL RLGK +VA+Y
Sbjct:   263 FPLMFDSSQTLLPAEELKKQFEQEDISLDSPIAASCGTGVTACILALGLYRLGKTNVAIY 322

Query:   301 DGSWTEWGAQPDTPVETSS 319
             DGSWTEW   P+ P+  SS
Sbjct:   323 DGSWTEWATAPNLPIVGSS 341

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IGI

UNIPROTKB|Q608D7 sseA "Sulfurtransferase" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 371 (135.7 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
 Identities = 71/137 (51%), Positives = 92/137 (67%)

Query:   182 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 241
             FQ +F+P L+  LE +++   E + Q++DARS  RF G  PEPR G+RSGH+PGS+ + F
Sbjct:   179 FQARFRPELVSNLEDLRKAAAERSIQILDARSPGRFAGTEPEPRPGLRSGHIPGSRNLFF 238

Query:   242 PQMLD-ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
              +++D  S        L   +   GI L++PV T CGTGVTA ILALGL  LG+ D AVY
Sbjct:   239 QRLIDETSHCFKSVAALAALYRDAGIDLDRPVTTTCGTGVTASILALGLYLLGRTDTAVY 298

Query:   301 DGSWTEWGAQPDTPVET 317
             DGSWTEWG + DTPVET
Sbjct:   299 DGSWTEWGGRTDTPVET 315

GO:0006790 "sulfur compound metabolic process" evidence=ISS

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=ISS

UNIPROTKB|E1C8D8 MPST "Sulfurtransferase" [Gallus gallus (taxid:9031)]

 Score = 351 (128.6 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
 Identities = 67/135 (49%), Positives = 89/135 (65%)

Query:    23 VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
             +VS  WL   ++       LKV+DASWY+P  +R+P QE++  HIPGA+FFD+D  +DRT
Sbjct:    10 LVSAKWLSEAIKSKQTGQALKVVDASWYLPKMKRDPKQEFEERHIPGAVFFDIDQCSDRT 69

Query:    79 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 136
             +   HM+P    FA  V  LG+ N   +VVYDG  +G+FSA RVWWMFRVFGH+ V +LD
Sbjct:    70 SPYDHMMPKANEFAEYVGKLGVGNDSHVVVYDGSDQGLFSAPRVWWMFRVFGHEAVSLLD 129

Query:   137 GGLPRWRASGYDVES 151
             GGL  W   G+ + S
Sbjct:   130 GGLKNWLREGFPLSS 144

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

UNIPROTKB|H9L016 H9L016 "Sulfurtransferase" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
 Identities = 61/114 (53%), Positives = 81/114 (71%)

Query:    40 VLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 99
             V+DASWY+P  +R+P QE++  HIPGA+FFD+D  +DRT+   HM+P  + FA  V  LG
Sbjct:     1 VVDASWYLPKMKRDPKQEFEERHIPGAVFFDIDQCSDRTSPYDHMMPKADEFAEYVGKLG 60

Query:   100 LENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 151
             + N   +VVYDG  +G+FSA RVWWMFRVFGH+ V +LDGGL  W   G+ + S
Sbjct:    61 VGNDSHVVVYDGSDQGLFSAPRVWWMFRVFGHEAVSLLDGGLKNWLREGFPLSS 114

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-9020 zgc:162544 "zgc:162544" [Danio rerio (taxid:7955)]

 Score = 343 (125.8 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
 Identities = 72/171 (42%), Positives = 100/171 (58%)

Query:    10 ADYSTLSVSPKEPVVSVDWL----HANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 65
             A + ++  +    +V+  WL     +N   P+L++LDASWY+P  +RNP  E++  HIPG
Sbjct:     1 AYWMSVMAAQTRALVAARWLADAVKSNRVGPNLRILDASWYLPKMKRNPRAEFEQTHIPG 60

Query:    66 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWM 123
             A FFD+D   D+++   HMLP++  FA  V  LG+ N   +VVYD    G FSA RVWWM
Sbjct:    61 ASFFDIDECCDKSSEFDHMLPTKGEFADYVGNLGIGNNTHVVVYDASDFGSFSAPRVWWM 120

Query:   124 FRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA-SEAIEKVYQ 173
             FRVFGH  V VLDGG   W   G+ V    S  A +  +A+  E+  K Y+
Sbjct:   121 FRVFGHSSVSVLDGGFKNWLKEGHPVSQQYSKPAPVDFNASFKESWVKTYE 171

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|J3KPV7 MPST "Sulfurtransferase" [Homo sapiens (taxid:9606)]

 Score = 315 (115.9 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
 Identities = 59/136 (43%), Positives = 82/136 (60%)

Query:   179 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKC 238
             P  F+ +  P  I T E +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  
Sbjct:   171 PAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVN 230

Query:   239 IPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVA 298
             IPF   L         +E++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV 
Sbjct:   231 IPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVP 290

Query:   299 VYDGSWTEW--GAQPD 312
             +YDGSW EW   A+P+
Sbjct:   291 IYDGSWVEWYMRARPE 306

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|P25325 MPST "3-mercaptopyruvate sulfurtransferase" [Homo sapiens (taxid:9606)]

 Score = 315 (115.9 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
 Identities = 59/136 (43%), Positives = 82/136 (60%)

Query:   179 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKC 238
             P  F+ +  P  I T E +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  
Sbjct:   151 PAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVN 210

Query:   239 IPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVA 298
             IPF   L         +E++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV 
Sbjct:   211 IPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVP 270

Query:   299 VYDGSWTEW--GAQPD 312
             +YDGSW EW   A+P+
Sbjct:   271 IYDGSWVEWYMRARPE 286

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IEA

GO:0070814 "hydrogen sulfide biosynthetic process" evidence=ISS

GO:0043005 "neuron projection" evidence=ISS

GO:0009636 "response to toxic substance" evidence=TAS

GO:0009440 "cyanate catabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|E2RJF7 MPST "Sulfurtransferase" [Canis lupus familiaris (taxid:9615)]

 Score = 313 (115.2 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
 Identities = 69/159 (43%), Positives = 91/159 (57%)

Query:    23 VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
             +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct:    10 LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query:    79 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 136
             +   HMLPS E FA     LG+     +VVYD   +G+++A RVWWMFR FGH  V +LD
Sbjct:    70 SPYDHMLPSAEHFAEYAGRLGVGAATHVVVYDASDQGLYAAPRVWWMFRAFGHRTVSLLD 129

Query:   137 GGLPRWRASGYDVESSASGDAILK--ASAASEAIEKVYQ 173
             GGL  W   G  + S  S  A      +A   A  K Y+
Sbjct:   130 GGLRHWLRLGLPLSSGKSRPAPAADFRAALDPAFVKTYE 168

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

RGD|620065 Mpst "mercaptopyruvate sulfurtransferase" [Rattus norvegicus (taxid:10116)]

 Score = 312 (114.9 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
 Identities = 60/136 (44%), Positives = 82/136 (60%)

Query:   179 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKC 238
             P  F  +  P  I T E +  N++   +Q+VDAR+  RF G  PEPR GI  GH+PGS  
Sbjct:   151 PAEFCAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVN 210

Query:   239 IPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVA 298
             IPF + L +       +E+++ F+++ + L KP+V  CG+GVTAC + LG    GK DV 
Sbjct:   211 IPFTEFLTSEGLEKSPEEIQRLFQEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKPDVP 270

Query:   299 VYDGSWTEW--GAQPD 312
             VYDGSW EW   AQP+
Sbjct:   271 VYDGSWVEWYMRAQPE 286

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O64530	STR1_ARATH	2, ., 8, ., 1, ., 2	0.7981	0.9937	0.8364	yes	no
P97532	THTM_RAT	2, ., 8, ., 1, ., 2	0.4127	0.8432	0.9057	yes	no
Q99J99	THTM_MOUSE	2, ., 8, ., 1, ., 2	0.4060	0.8432	0.9057	yes	no
Q24JL3	STR2_ARATH	2, ., 8, ., 1, ., 2	0.7335	0.9937	0.9269	no	no
Q9I452	THTM_PSEAE	2, ., 8, ., 1, ., 2	0.3268	0.8244	0.9260	yes	no
P25325	THTM_HUMAN	2, ., 8, ., 1, ., 2	0.4123	0.8275	0.8888	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.8.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_VII0743	SubName- Full=Putative uncharacterized protein; (372 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIV.3012.1	aspartate transaminase (EC-2.6.1.1) (403 aa)						•			0.899
	gw1.VI.2755.1	aspartate transaminase (EC-2.6.1.1) (397 aa)						•			0.899
	grail3.0013044701	aspartate transaminase (EC-2.6.1.1) (466 aa)						•			0.899
	eugene3.00030830	lactate dehydrogenase (EC-1.1.1.27) (351 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XVIII0241	SubName- Full=Putative uncharacterized protein; (407 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XVIII0158	aspartate transaminase (EC-2.6.1.1) (466 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_VI1672	aspartate transaminase (EC-2.6.1.1) (449 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_VI1671	aspartate transaminase (EC-2.6.1.1) (442 aa)						•			0.899
	fgenesh4_pm.C_LG_I001118	hypothetical protein (460 aa)	•				•	•	•		0.875
	estExt_Genewise1_v1.C_LG_VII0255	cysteine desulfurase/transaminase (EC-2.8.1.7) (452 aa)					•	•	•		0.845

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	319
PLN02723	320	PLN02723, PLN02723, 3-mercaptopyruvate sulfurtrans	0.0
COG2897	285	COG2897, SseA, Rhodanese-related sulfurtransferase	1e-103
PRK11493	281	PRK11493, sseA, 3-mercaptopyruvate sulfurtransfera	2e-85
cd01448	122	cd01448, TST_Repeat_1, Thiosulfate sulfurtransfera	7e-54
cd01449	118	cd01449, TST_Repeat_2, Thiosulfate sulfurtransfera	1e-53
cd01445	138	cd01445, TST_Repeats, Thiosulfate sulfurtransferas	8e-22
smart00450	100	smart00450, RHOD, Rhodanese Homology Domain	3e-19
PRK09629	610	PRK09629, PRK09629, bifunctional thiosulfate sulfu	4e-19
smart00450	100	smart00450, RHOD, Rhodanese Homology Domain	2e-18
pfam00581	106	pfam00581, Rhodanese, Rhodanese-like domain	4e-18
pfam00581	106	pfam00581, Rhodanese, Rhodanese-like domain	7e-18
cd01445	138	cd01445, TST_Repeats, Thiosulfate sulfurtransferas	2e-15
cd00158	89	cd00158, RHOD, Rhodanese Homology Domain (RHOD); a	3e-12
cd01519	106	cd01519, RHOD_HSP67B2, Member of the Rhodanese Hom	2e-09
cd01449	118	cd01449, TST_Repeat_2, Thiosulfate sulfurtransfera	2e-06
cd00158	89	cd00158, RHOD, Rhodanese Homology Domain (RHOD); a	2e-06
cd01448	122	cd01448, TST_Repeat_1, Thiosulfate sulfurtransfera	3e-06
COG0607	110	COG0607, PspE, Rhodanese-related sulfurtransferase	7e-04
cd01524	90	cd01524, RHOD_Pyr_redox, Member of the Rhodanese H	0.001

>gnl|CDD|178324 PLN02723, PLN02723, 3-mercaptopyruvate sulfurtransferase

 Score =  642 bits (1658), Expect = 0.0
 Identities = 271/319 (84%), Positives = 299/319 (93%)

Query: 1   MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 60
           M+S  +  +A+YST S+S  EPVVSVDWLHANLREPD+KVLDASWYMPDEQRNP QEYQV
Sbjct: 1   MASSGSETKANYSTQSISTNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQV 60

Query: 61  AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 120
           AHIPGALFFD+DG++DRTT+LPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARV
Sbjct: 61  AHIPGALFFDLDGISDRTTDLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARV 120

Query: 121 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 180
           WWMFRVFGH++VWVLDGGLP+WRASGYDVESSASGDAILKASAASEAIEKVYQGQ V P 
Sbjct: 121 WWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVSPI 180

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 240
           TFQTKFQPHL+WTLEQVK+NIE+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKC+P
Sbjct: 181 TFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVP 240

Query: 241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
           FPQMLD+SQTLLPA+ELKKRFEQEGISL+ P+V +CGTGVTACILALGL+RLGK DV VY
Sbjct: 241 FPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDVPVY 300

Query: 301 DGSWTEWGAQPDTPVETSS 319
           DGSWTEWGA PDTPV TS+
Sbjct: 301 DGSWTEWGALPDTPVATST 319

Length = 320

>gnl|CDD|225450 COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score =  303 bits (777), Expect = e-103
 Identities = 117/299 (39%), Positives = 158/299 (52%), Gaps = 24/299 (8%)

Query: 19  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
             E +VS DWL  NL +P + ++DA   +PD      +EY   HIPGA+FFD +      
Sbjct: 8   SSEFLVSPDWLAENLDDPAVVIVDARIILPDPDDA--EEYLEGHIPGAVFFDWEADLSDP 65

Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 138
             LPHMLPS E FA  +  LG+ N D +VVYD  G F AAR WW+ R  GH+ V +LDGG
Sbjct: 66  VPLPHMLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGG 125

Query: 139 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 198
           LP W+A+G  +E+                           PTTF  K+    +     V 
Sbjct: 126 LPAWKAAGLPLETEPP---------------------EPPPTTFSAKYNVKAVVDATLVA 164

Query: 199 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK 258
             +E     L+DARS  RF G  PEPR G  +GH+PG+  IP+  ++D        +E+ 
Sbjct: 165 DALEVPAVLLIDARSPERFRGKEPEPRDGK-AGHIPGAINIPWTDLVDDGGLFKSPEEIA 223

Query: 259 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 317
           + +   GI  +K V+  CG+GV A +  L L  LG  +  +YDGSW+EWG+ PD PVET
Sbjct: 224 RLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNNRLYDGSWSEWGSDPDRPVET 282

Length = 285

>gnl|CDD|236917 PRK11493, sseA, 3-mercaptopyruvate sulfurtransferase; Provisional

 Score =  258 bits (660), Expect = 2e-85
 Identities = 113/295 (38%), Positives = 163/295 (55%), Gaps = 23/295 (7%)

Query: 24  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 82
           V+ DWL  ++ +P+++++DA    P  E R+   EY+  HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLP 66

Query: 83  HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 142
           HM+P  E FA A+  LG+     LVVYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMMPRPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGW 126

Query: 143 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 202
           +     +E    G   L                      F   F P  +  L  V     
Sbjct: 127 QRDDLLLE---EGAVELP------------------EGEFNAAFNPEAVVRLTDVLLASH 165

Query: 203 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 262
           E T Q+VDAR  ARF+ +  EPR G+R GH+PG+  +P+ + L     L   DEL   F 
Sbjct: 166 EKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTE-LVREGELKTTDELDAIFF 224

Query: 263 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 317
             G+S ++P++ +CG+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE 
Sbjct: 225 GRGVSFDRPIIASCGSGVTAAVVVLALATLDVPNVKLYDGAWSEWGARADLPVEP 279

Length = 281

>gnl|CDD|238725 cd01448, TST_Repeat_1, Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

 Score =  171 bits (436), Expect = 7e-54
 Identities = 66/124 (53%), Positives = 84/124 (67%), Gaps = 2/124 (1%)

Query: 23  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 82
           +VS DWL  +L +PD+++LDA WY+PD  R+  +EY   HIPGA+FFD+D   D  +  P
Sbjct: 1   LVSPDWLAEHLDDPDVRILDARWYLPD--RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGP 58

Query: 83  HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 142
           HMLPS E FA  + +LG+ N D +VVYD  G F AAR WW  R FGH+ V VLDGGL  W
Sbjct: 59  HMLPSPEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAW 118

Query: 143 RASG 146
           +A G
Sbjct: 119 KAEG 122

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction. Length = 122

>gnl|CDD|238726 cd01449, TST_Repeat_2, Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

 Score =  171 bits (435), Expect = 1e-53
 Identities = 60/117 (51%), Positives = 80/117 (68%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
           T E+V  N++ G  QLVDARS  RF G+ PEPR G+RSGH+PG+  IP+  +LD   T  
Sbjct: 2   TAEEVLANLDSGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDEDGTFK 61

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 309
             +EL+  F   GI+ +KPV+  CG+GVTAC+L L L  LG  +V +YDGSW+EWG+
Sbjct: 62  SPEELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYKNVRLYDGSWSEWGS 118

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. Length = 118

>gnl|CDD|238722 cd01445, TST_Repeats, Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

 Score = 89.1 bits (220), Expect = 8e-22
 Identities = 45/136 (33%), Positives = 57/136 (41%), Gaps = 17/136 (12%)

Query: 24  VSVDWLHANLRE----PDLKVLDASWYMPD--EQRNPFQEYQVA---------HIPGALF 68
            S + L  NL         ++LDA    P   E R  + E Q           HIPGA F
Sbjct: 1   KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASF 60

Query: 69  FDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRV 126
           FD +   D       M PSE  FAA   A G++    L+  DG   G F+A  +    R+
Sbjct: 61  FDFEECLDEAGFEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARL 120

Query: 127 FGHDRVWVLDGGLPRW 142
            GH  V +LDGG   W
Sbjct: 121 CGHPDVAILDGGFFEW 136

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats. Length = 138

>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain

 Score = 80.6 bits (199), Expect = 3e-19
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 202 EEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRF 261
            +    L+D RS   ++G           GH+PG+  IP  ++LD     L   E ++  
Sbjct: 1   NDEKVVLLDVRSPEEYEG-----------GHIPGAVNIPLSELLDRR-GELDILEFEELL 48

Query: 262 EQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 312
           ++ G+  +KPVV  C +G  +   A  L  LG  +V + DG + EW A   
Sbjct: 49  KRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFKNVYLLDGGYKEWSAAGP 99

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100

>gnl|CDD|104071 PRK09629, PRK09629, bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

 Score = 87.5 bits (216), Expect = 4e-19
 Identities = 72/259 (27%), Positives = 100/259 (38%), Gaps = 24/259 (9%)

Query: 58  YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 117
           Y+  HI GA F D           P +LP           LG       VVYD +G   A
Sbjct: 36  YEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELGHNPDAVYVVYDDEGGGWA 95

Query: 118 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV 177
            R  W+  V GH     LDGG+  W A    + +     A                    
Sbjct: 96  GRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDVPPVA-------------------G 136

Query: 178 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 237
           GP T     +P    T E ++  +      + DAR+   + G+     KG   GH+PG+ 
Sbjct: 137 GPVTLTLHDEPTA--TREYLQSRLGAADLAIWDARAPTEYSGEKVVAAKG---GHIPGAV 191

Query: 238 CIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDV 297
              +   +D ++ L    ++ +     GI+ +K V+T C T   +    L    LG   V
Sbjct: 192 NFEWTAGMDKARNLRIRQDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYPRV 251

Query: 298 AVYDGSWTEWGAQPDTPVE 316
             Y GSW EWG  PDTPVE
Sbjct: 252 KAYAGSWGEWGNHPDTPVE 270

Length = 610

>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain

 Score = 78.7 bits (194), Expect = 2e-18
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 15/114 (13%)

Query: 35  EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA 94
           +  + +LD         R+P +EY+  HIPGA+   +  + DR   L  +      F   
Sbjct: 2   DEKVVLLDV--------RSP-EEYEGGHIPGAVNIPLSELLDRRGELDIL-----EFEEL 47

Query: 95  VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 148
           +  LGL+    +VVY   G  SA +  W+ R  G   V++LDGG   W A+G  
Sbjct: 48  LKRLGLDKDKPVVVYCRSGNRSA-KAAWLLRELGFKNVYLLDGGYKEWSAAGPP 100

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100

>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain

 Score = 77.9 bits (192), Expect = 4e-18
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 27/126 (21%)

Query: 25  SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHM 84
           + + L A L   D+ ++D             +EY   HIPGA+            N+P  
Sbjct: 1   TAEELKALLEADDVVLIDVR---------SPEEYAKGHIPGAV------------NIPLS 39

Query: 85  LPSEEAFAAAVSALG--LENKDGLVVYDGKGIFS----AARVWWMFRVFGHDRVWVLDGG 138
           LPS +   + +  LG  L+    +VVY   G  S    A  +  + +  G+  V+VLDGG
Sbjct: 40  LPSLDKLESELEELGKKLDKDKTIVVYCASGNRSGQAAALLLALILKALGYKNVYVLDGG 99

Query: 139 LPRWRA 144
              W+A
Sbjct: 100 FEAWKA 105

Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106

>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain

 Score = 77.2 bits (190), Expect = 7e-18
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 26/122 (21%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
           T E++K  +E     L+D RS   +             GH+PG+  IP            
Sbjct: 1   TAEELKALLEADDVVLIDVRSPEEYAK-----------GHIPGAVNIPLSLP-------- 41

Query: 253 PADELKKRFEQEGISL--EKPVVTACGTG-----VTACILALGLNRLGKHDVAVYDGSWT 305
             D+L+   E+ G  L  +K +V  C +G       A +LAL L  LG  +V V DG + 
Sbjct: 42  SLDKLESELEELGKKLDKDKTIVVYCASGNRSGQAAALLLALILKALGYKNVYVLDGGFE 101

Query: 306 EW 307
            W
Sbjct: 102 AW 103

Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106

>gnl|CDD|238722 cd01445, TST_Repeats, Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

 Score = 71.7 bits (175), Expect = 2e-15
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 16/132 (12%)

Query: 192 WTLEQVKRNIEEGTYQLVDAR--------SKARFDGDAPEPRK-GIRSGHVPGSKCIPFP 242
              E ++       +QL+DAR        ++  +    PEP   G+ SGH+PG+    F 
Sbjct: 5   QLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFE 64

Query: 243 QMLDAS---QTLLPAD-ELKKRFEQEGISLEKPVVTACG---TGVTACILALGLNRLGKH 295
           + LD +   +++ P++ E    FE +GI L+K ++   G    G TAC +AL     G  
Sbjct: 65  ECLDEAGFEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124

Query: 296 DVAVYDGSWTEW 307
           DVA+ DG + EW
Sbjct: 125 DVAILDGGFFEW 136

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats. Length = 138

>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

 Score = 61.5 bits (150), Expect = 3e-12
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 24/112 (21%)

Query: 196 QVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           ++K  +++    L+D R    +            +GH+PG+  IP               
Sbjct: 1   ELKELLDDEDAVLLDVREPEEYA-----------AGHIPGAINIPL-------------S 36

Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
           EL++R     +  +KP+V  C +G  +   A  L + G  +V   +G    W
Sbjct: 37  ELEERAALLELDKDKPIVVYCRSGNRSARAAKLLRKAGGTNVYNLEGGMLAW 88

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89

>gnl|CDD|238777 cd01519, RHOD_HSP67B2, Member of the Rhodanese Homology Domain superfamily

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 22/123 (17%)

Query: 192 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 249
           ++ E+VK           L+D R          EP + +++G +PG+  IP   + DA  
Sbjct: 1   YSFEEVKNLPNPHPNKV-LIDVR----------EPEE-LKTGKIPGAINIPLSSLPDALA 48

Query: 250 TLLPADELKKRFEQEGISLEKPVVTACGTGV---TACILALGLNRLGKHDVAVYDGSWTE 306
             L  +E +K++     S +K ++  C  GV    A  LA     LG  +V  Y GSW +
Sbjct: 49  --LSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELA---RSLGYENVGNYPGSWLD 103

Query: 307 WGA 309
           W A
Sbjct: 104 WAA 106

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized. Length = 106

>gnl|CDD|238726 cd01449, TST_Repeat_2, Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 29/128 (22%)

Query: 24  VSVDWLHANLREPDLKVLDA-SWYMPDE---QRNPFQEYQVA-HIPGALFFDVDGVADRT 78
           V+ + + ANL   D++++DA S   P+    +    +    + HIPGA+           
Sbjct: 1   VTAEEVLANLDSGDVQLVDARS---PERFRGEVPEPRPGLRSGHIPGAV----------- 46

Query: 79  TNLPH--------MLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHD 130
            N+P            S E   A  +ALG+     ++VY G G+ +A  +     + G+ 
Sbjct: 47  -NIPWTSLLDEDGTFKSPEELRALFAALGITPDKPVIVYCGSGV-TACVLLLALELLGYK 104

Query: 131 RVWVLDGG 138
            V + DG 
Sbjct: 105 NVRLYDGS 112

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. Length = 118

>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 29/117 (24%)

Query: 28  WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS 87
            L   L + D  +LD         R P  EY   HIPGA+   +  + +R          
Sbjct: 1   ELKELLDDEDAVLLDV--------REPE-EYAAGHIPGAINIPLSELEER---------- 41

Query: 88  EEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR 143
                   +AL   +KD  +VVY   G   +AR   + R  G   V+ L+GG+  W+
Sbjct: 42  --------AALLELDKDKPIVVYCRSGN-RSARAAKLLRKAGGTNVYNLEGGMLAWK 89

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89

>gnl|CDD|238725 cd01448, TST_Repeat_1, Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 9/120 (7%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT-- 250
           + + +  ++++   +++DAR    +     + RK    GH+PG+      + LD      
Sbjct: 3   SPDWLAEHLDDPDVRILDAR----WYLPDRDGRKEYLEGHIPGAVFFDLDEDLDDKSPGP 58

Query: 251 --LLPADELKKRFEQEGISLEKPVV-TACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
             L   +E  +     GIS +  VV    G G  A      L   G  +V V DG    W
Sbjct: 59  HMLPSPEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAW 118

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction. Length = 122

>gnl|CDD|223680 COG0607, PspE, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score = 38.4 bits (89), Expect = 7e-04
 Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 23/115 (20%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
           + ++    +      L+D R    ++            GH+PG+               +
Sbjct: 8   SEDEAALLLAGEDAVLLDVREPEEYE-----------RGHIPGA------------AINI 44

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
           P  ELK       +  + P+V  C +GV +   A  L   G  +V   DG    W
Sbjct: 45  PLSELKAAENLLELPDDDPIVVYCASGVRSAAAAAALKLAGFTNVYNLDGGIDAW 99

Length = 110

>gnl|CDD|238782 cd01524, RHOD_Pyr_redox, Member of the Rhodanese Homology Domain superfamily

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 26/83 (31%)

Query: 199 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK 258
            N       L+D R+   F             GH+ G+  IP              DEL+
Sbjct: 7   DNYRADGVTLIDVRTPQEF-----------EKGHIKGAINIPL-------------DELR 42

Query: 259 KRFEQEGISLEKPVVTACGTGVT 281
            R  +  +  +K ++  C  G+ 
Sbjct: 43  DRLNE--LPKDKEIIVYCAVGLR 63

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain. Length = 90

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
PLN02723	320	3-mercaptopyruvate sulfurtransferase	100.0
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	100.0
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	100.0
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	100.0
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	100.0
cd01445	138	TST_Repeats Thiosulfate sulfurtransferases (TST) c	99.9
cd01449	118	TST_Repeat_2 Thiosulfate sulfurtransferase (TST),	99.9
cd01445	138	TST_Repeats Thiosulfate sulfurtransferases (TST) c	99.89
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	99.88
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	99.87
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	99.87
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	99.87
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	99.85
PLN02160	136	thiosulfate sulfurtransferase	99.85
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	99.85
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	99.84
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	99.84
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	99.83
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	99.83
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	99.83
cd01449	118	TST_Repeat_2 Thiosulfate sulfurtransferase (TST),	99.82
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	99.82
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	99.82
PLN02723	320	3-mercaptopyruvate sulfurtransferase	99.82
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	99.81
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	99.81
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	99.81
cd01520	128	RHOD_YbbB Member of the Rhodanese Homology Domain	99.81
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	99.81
cd01526	122	RHOD_ThiF Member of the Rhodanese Homology Domain	99.8
cd01520	128	RHOD_YbbB Member of the Rhodanese Homology Domain	99.8
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	99.79
cd01525	105	RHOD_Kc Member of the Rhodanese Homology Domain su	99.79
cd01447	103	Polysulfide_ST Polysulfide-sulfurtransferase - Rho	99.79
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	99.79
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	99.78
cd01525	105	RHOD_Kc Member of the Rhodanese Homology Domain su	99.78
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	99.78
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	99.78
cd01444	96	GlpE_ST GlpE sulfurtransferase (ST) and homologs a	99.78
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	99.78
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	99.78
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	99.78
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	99.77
cd01524	90	RHOD_Pyr_redox Member of the Rhodanese Homology Do	99.77
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	99.77
cd01521	110	RHOD_PspE2 Member of the Rhodanese Homology Domain	99.77
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	99.76
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	99.76
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	99.76
cd01521	110	RHOD_PspE2 Member of the Rhodanese Homology Domain	99.76
cd01447	103	Polysulfide_ST Polysulfide-sulfurtransferase - Rho	99.75
cd01529	96	4RHOD_Repeats Member of the Rhodanese Homology Dom	99.75
PLN02160	136	thiosulfate sulfurtransferase	99.75
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	99.75
cd01526	122	RHOD_ThiF Member of the Rhodanese Homology Domain	99.75
cd01530	121	Cdc25 Cdc25 phosphatases are members of the Rhodan	99.74
cd01535	145	4RHOD_Repeat_4 Member of the Rhodanese Homology Do	99.74
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	99.74
cd01530	121	Cdc25 Cdc25 phosphatases are members of the Rhodan	99.74
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	99.73
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	99.73
cd01444	96	GlpE_ST GlpE sulfurtransferase (ST) and homologs a	99.71
cd01529	96	4RHOD_Repeats Member of the Rhodanese Homology Dom	99.71
cd01524	90	RHOD_Pyr_redox Member of the Rhodanese Homology Do	99.71
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	99.7
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	99.7
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	99.7
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	99.7
cd01535	145	4RHOD_Repeat_4 Member of the Rhodanese Homology Do	99.69
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	99.69
cd00158	89	RHOD Rhodanese Homology Domain (RHOD); an alpha be	99.69
cd01532	92	4RHOD_Repeat_1 Member of the Rhodanese Homology Do	99.68
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	99.68
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	99.67
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	99.67
cd01532	92	4RHOD_Repeat_1 Member of the Rhodanese Homology Do	99.67
PRK01415	247	hypothetical protein; Validated	99.66
cd00158	89	RHOD Rhodanese Homology Domain (RHOD); an alpha be	99.65
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	99.64
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	99.62
cd01446	132	DSP_MapKP N-terminal regulatory rhodanese domain o	99.61
PRK01415	247	hypothetical protein; Validated	99.6
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	99.6
PRK05320	257	rhodanese superfamily protein; Provisional	99.6
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	99.59
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	99.58
PRK07411	390	hypothetical protein; Validated	99.54
PRK05320	257	rhodanese superfamily protein; Provisional	99.54
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	99.54
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	99.53
cd01446	132	DSP_MapKP N-terminal regulatory rhodanese domain o	99.53
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	99.51
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	99.49
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	99.47
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	99.45
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	99.44
PRK07411	390	hypothetical protein; Validated	99.44
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	99.41
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	99.27
PRK01269	482	tRNA s(4)U8 sulfurtransferase; Provisional	99.13
COG1054	308	Predicted sulfurtransferase [General function pred	99.0
KOG3772	325	consensus M-phase inducer phosphatase [Cell cycle	98.98
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	98.91
COG1054	308	Predicted sulfurtransferase [General function pred	98.9
PRK01269	482	tRNA s(4)U8 sulfurtransferase; Provisional	98.81
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	98.72
KOG3772	325	consensus M-phase inducer phosphatase [Cell cycle	98.71
COG5105	427	MIH1 Mitotic inducer, protein phosphatase [Cell di	98.4
COG5105	427	MIH1 Mitotic inducer, protein phosphatase [Cell di	97.68
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	96.74
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	96.65
COG2603	334	Predicted ATPase [General function prediction only	96.64
KOG1717	343	consensus Dual specificity phosphatase [Defense me	96.07
KOG1093	725	consensus Predicted protein kinase (contains TBC a	94.42
KOG3636	669	consensus Uncharacterized conserved protein, conta	93.58
COG3453	130	Uncharacterized protein conserved in bacteria [Fun	89.74
COG2603	334	Predicted ATPase [General function prediction only	88.65
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	87.21
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	87.08
KOG1717	343	consensus Dual specificity phosphatase [Defense me	83.81
PLN02727	986	NAD kinase	82.75
smart00195	138	DSPc Dual specificity phosphatase, catalytic domai	82.46
cd00127	139	DSPc Dual specificity phosphatases (DSP); Ser/Thr	81.88

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=100.00  E-value=3.6e-60  Score=437.90  Aligned_cols=319  Identities=85%  Similarity=1.393  Sum_probs=285.0

Q ss_pred             CcccccccCccccccCCCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCC
Q 020963            1 MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN   80 (319)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~   80 (319)
                      |.|+.++-.++|++.++.+...+|+++||.+++++++++|||+|+..+...|++..+|..||||||+|+|+..+......
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~lvs~~~L~~~l~~~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgAi~i~~~~~~~~~~~   80 (320)
T PLN02723          1 MASSGSETKANYSTQSISTNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDLDGISDRTTD   80 (320)
T ss_pred             CCccchhhcccCcccccccCCceecHHHHHHHhcCCCeEEEEeeccccCCCCchHHHHHhccCCCCeecCHHHhcCCCCC
Confidence            67777888899999999998999999999999988789999999877766665557899999999999998877665556


Q ss_pred             CCCCCCCHHHHHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhh
Q 020963           81 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILK  160 (319)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~  160 (319)
                      ...++|+.++|++.++++||+++++|||||+.+...+++++|+|+.+||++|++|+||+.+|.++|+|+++..+.+++++
T Consensus        81 ~~~~lp~~~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~~~W~~~G~pv~~~~~~~~~~~  160 (320)
T PLN02723         81 LPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAILK  160 (320)
T ss_pred             cCCCCCCHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCHHHHHHcCCCcccCCCcccccc
Confidence            67889999999999999999999999999988877789999999999999999999999999999999998765555566


Q ss_pred             hhhhHHHHHHHhcCcccCCcccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccC
Q 020963          161 ASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP  240 (319)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip  240 (319)
                      ...+++.+++.++++.+....|....++..+++.+++.+++++++++|||+|+..+|.|....+....+.||||||+|||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgAvnip  240 (320)
T PLN02723        161 ASAASEAIEKVYQGQTVSPITFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVP  240 (320)
T ss_pred             ccccccccccccccCCCCCCcccccCCccceecHHHHHHhhcCCCeEEEECCCcccccCCCCCCCCCCcCCcCCCCcccC
Confidence            56666677777766677778888888888999999999999877889999999999999876665556899999999999


Q ss_pred             cccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccCC
Q 020963          241 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  319 (319)
Q Consensus       241 ~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~~  319 (319)
                      +.++.+.++.|+++++|++++.+.|++++++||+||++|.+|+.++++|+.+||++|++|+|||.+|....++|++++.
T Consensus       241 ~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v~~YdGs~~eW~~~~~~Pv~~~~  319 (320)
T PLN02723        241 FPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGALPDTPVATST  319 (320)
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCeeEeCCCHHHHhcCCCCCccCCC
Confidence            9998888889999999999999999999999999999999999999999999999999999999999998889999863

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.1e-55  Score=394.97  Aligned_cols=279  Identities=42%  Similarity=0.801  Sum_probs=254.2

Q ss_pred             CCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 020963           17 VSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS   96 (319)
Q Consensus        17 ~~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~   96 (319)
                      ..+...+||++||.+++.+++++++|+|+..+...+  ...|..+|||||+++++.........+++++|++++|.++|+
T Consensus         6 ~~~~~~lVs~~wl~~~l~~~~~~~~d~~~~~~~~~~--~~~Y~~~HIPGAv~~d~~~~~~~~~~~~~~lp~~e~fa~~~~   83 (285)
T COG2897           6 LMSSEFLVSPDWLAENLDDPAVVIVDARIILPDPDD--AEEYLEGHIPGAVFFDWEADLSDPVPLPHMLPSPEQFAKLLG   83 (285)
T ss_pred             ccCcceEEcHHHHHhhccccccccCceEEEeCCcch--HHHHHhccCCCCEecCHHHhhcCCCCCCCCCCCHHHHHHHHH
Confidence            345688999999999999888888888877766543  579999999999999998765555557899999999999999


Q ss_pred             hCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcc
Q 020963           97 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  176 (319)
Q Consensus        97 ~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (319)
                      ++||+.+++||+|++.+...|+|++|+|+.+|+++|++|+||+.+|+++|+|+++.+                     +.
T Consensus        84 ~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG~~~W~~~g~p~~~~~---------------------~~  142 (285)
T COG2897          84 ELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGGLPAWKAAGLPLETEP---------------------PE  142 (285)
T ss_pred             HcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCCHHHHHHcCCCccCCC---------------------CC
Confidence            999999999999998888889999999999999999999999999999999999965                     34


Q ss_pred             cCCcccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHH
Q 020963          177 VGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE  256 (319)
Q Consensus       177 ~~~~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~  256 (319)
                      .+...|..+++....++.+.++..++.+..+|||+|++++|.|...+|.... .||||||+||||..+.+..+.|+++++
T Consensus       143 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~liDaR~~~rf~G~~~ep~~~~-~GHIPGAiNipw~~~~~~~~~~~~~~~  221 (285)
T COG2897         143 PPPTTFSAKYNVKAVVDATLVADALEVPAVLLIDARSPERFRGKEPEPRDGK-AGHIPGAINIPWTDLVDDGGLFKSPEE  221 (285)
T ss_pred             CCCccccccCCccccCCHHHHHHHhcCCCeEEEecCCHHHhCCCCCCCCCCC-CCCCCCCcCcCHHHHhcCCCccCcHHH
Confidence            5777888889999999999999999988999999999999999988886553 899999999999999997788999999


Q ss_pred             HHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccCC
Q 020963          257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  319 (319)
Q Consensus       257 l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~~  319 (319)
                      ++.+++..|++++++||+||++|.+|+..+++|+.+|+.+.++|+|||.+|.+..+.|+++|.
T Consensus       222 ~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~~lYdGSWsEWg~~~~~PV~~g~  284 (285)
T COG2897         222 IARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNNRLYDGSWSEWGSDPDRPVETGE  284 (285)
T ss_pred             HHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCcccccChHHHhhcCCCCccccCC
Confidence            999999999999999999999999999999999999999889999999999999888999874

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=100.00  E-value=7.8e-53  Score=383.20  Aligned_cols=277  Identities=39%  Similarity=0.805  Sum_probs=239.9

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCC-CchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQR-NPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r-~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      ..+|+++||.+++++++++|||||....+... +...+|..||||||+|+|+..+.......+.++++.++|++.++++|
T Consensus         4 ~~lvs~~~l~~~l~~~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G   83 (281)
T PRK11493          4 TWFVAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLPHMMPRPETFAVAMRELG   83 (281)
T ss_pred             CcccCHHHHHHhcCCCCeEEEEeeCCCCCccccchHHHHHhCcCCCCEEcCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            47899999999999888999999943322211 12578999999999999988766555556678889999999999999


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  179 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (319)
                      ++++++||+||..+.+.+++++|+|+.+||++|++|+||+.+|.++|+|+++...                     .+..
T Consensus        84 i~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~---------------------~~~~  142 (281)
T PRK11493         84 VNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGWQRDDLLLEEGAV---------------------ELPE  142 (281)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCCHHHHHHcCCCccCCCC---------------------CCCC
Confidence            9999999999987766688999999999999999999999999999999988752                     2356


Q ss_pred             cccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 020963          180 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  259 (319)
Q Consensus       180 ~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~  259 (319)
                      .+|.+..++..+++.+++...+..++++|||+|++++|.|....+....+.||||||+|+|+.++.+ .+.|+++++|++
T Consensus       143 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA~~i~~~~~~~-~~~~~~~~~l~~  221 (281)
T PRK11493        143 GEFNAAFNPEAVVRLTDVLLASHEKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDA  221 (281)
T ss_pred             CcccccCCccceecHHHHHHhhcCCCcEEEeCCCccceeeeccCCCCCcccccCCCcCCCCHHHhcC-CCCcCCHHHHHH
Confidence            6777777788899999999888777789999999999999765554455789999999999999875 467899999999


Q ss_pred             HHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccCC
Q 020963          260 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  319 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~~  319 (319)
                      .|.+.|++++++||+||++|.||+.++++|+.+||+|+++|+|||.+|....++|++++.
T Consensus       222 ~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~v~~y~Gs~~eW~~~~~~P~~~~~  281 (281)
T PRK11493        222 IFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVPNVKLYDGAWSEWGARADLPVEPAK  281 (281)
T ss_pred             HHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCCHHHHccCCCCCcCCCC
Confidence            999999999999999999999999999999999999999999999999985469999874

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=8.3e-51  Score=401.50  Aligned_cols=266  Identities=27%  Similarity=0.463  Sum_probs=236.0

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      ...+||++||.+++++++++|||||         +..+|..||||||+|+|+..+........+++|+.++|++.+.++|
T Consensus         7 ~~~lIs~~eL~~~l~~~~vvIIDvR---------~~~eY~~GHIPGAv~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~lG   77 (610)
T PRK09629          7 LSLVIEPNDLLERLDAPELILVDLT---------SSARYEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELG   77 (610)
T ss_pred             CCceecHHHHHHHhcCCCEEEEECC---------ChHHHHhCCCCCcEEcChhHhhccCCCCCCCCCCHHHHHHHHHHcC
Confidence            4579999999999998889999998         6789999999999999987543333345668899999999999999


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  179 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (319)
                      ++++++||+||..+...+++++|+|+.+||++|++|+||+.+|+.+|+|+++..+                     ..+.
T Consensus        78 I~~d~~VVvYd~~g~~~A~R~~w~L~~~G~~~V~iLdGG~~aW~~ag~p~~~~~~---------------------~~~~  136 (610)
T PRK09629         78 HNPDAVYVVYDDEGGGWAGRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDVP---------------------PVAG  136 (610)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHcCCCCEEEcCCCHHHHHHcCCccccCCC---------------------CCCC
Confidence            9999999999988766799999999999999999999999999999999988642                     2234


Q ss_pred             cccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 020963          180 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  259 (319)
Q Consensus       180 ~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~  259 (319)
                      ..|.....+...++.+++.+++++++++|||+|++++|.|....   ..+.||||||+|+|+..+++..+.|++++++++
T Consensus       137 ~~~~~~~~~~~~v~~e~v~~~l~~~~~~iIDaR~~~ef~G~~~~---~~r~GHIPGAvnip~~~~~~~~~~lk~~~el~~  213 (610)
T PRK09629        137 GPVTLTLHDEPTATREYLQSRLGAADLAIWDARAPTEYSGEKVV---AAKGGHIPGAVNFEWTAGMDKARNLRIRQDMPE  213 (610)
T ss_pred             cceeeccCCcccccHHHHHHhhCCCCcEEEECCCccccCCcccc---cccCCCCCCCeecCHHHhcCCCCCCCCHHHHHH
Confidence            55666667778999999999998878999999999999986532   237899999999999988887788999999999


Q ss_pred             HHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          260 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++.+.|++++++||+||++|.+|+.++++|+.+||+||++|+|||.+|....++|+++.
T Consensus       214 ~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~~V~~YdGsw~eW~~~~~lPv~~~  272 (610)
T PRK09629        214 ILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYPRVKAYAGSWGEWGNHPDTPVEVP  272 (610)
T ss_pred             HHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCCCCcEEeCCCHHHHhCCCCCccccC
Confidence            99999999999999999999999999999999999999999999999999877999874

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=100.00  E-value=1.6e-43  Score=309.53  Aligned_cols=270  Identities=46%  Similarity=0.865  Sum_probs=244.9

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      ...++++.|+.+++.+..++|||+.|+++...|+...+|+.-|||||++++++.+....+..++++|..+.|++..+.+|
T Consensus         3 ~~~iv~~~~v~~~~~~~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e~Fa~y~~~lG   82 (286)
T KOG1529|consen    3 VDSIVSVKWVMENLGNHGLRILDASWYFPPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAEHFAEYASRLG   82 (286)
T ss_pred             cccccChHHHHHhCcCCCeEEEeeeeecCchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHHHHHHHHHhcC
Confidence            45789999999999998899999999999998988899999999999999999988888889999999999999999999


Q ss_pred             CCCCCeEEEEcC--CCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCccc
Q 020963          100 LENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV  177 (319)
Q Consensus       100 i~~~~~vvly~~--~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (319)
                      +++++.||||++  .|+..|+|++|+|+.+|+++|++|+||+..|++.|+|+.+....              +    +. 
T Consensus        83 i~n~d~vViYd~~~~Gm~~Asrv~W~fr~fGh~~VslL~GG~~~Wk~~g~~~~s~~~~--------------~----p~-  143 (286)
T KOG1529|consen   83 VDNGDHVVIYDRGDGGMFSASRVWWTFRVFGHTKVSLLNGGFRAWKAAGGPVDSSKVE--------------T----PY-  143 (286)
T ss_pred             CCCCCeEEEEcCCCcceeehhhHHHHHHHhCccEEEEecCcHHHHHHcCCcccccccc--------------C----CC-
Confidence            999999999988  78888999999999999999999999999999999999997631              0    00 


Q ss_pred             CCcccccccCCccccCHHHHHHH-hhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHH
Q 020963          178 GPTTFQTKFQPHLIWTLEQVKRN-IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE  256 (319)
Q Consensus       178 ~~~~~~~~~~~~~~is~~~l~~~-~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~  256 (319)
                      .+..+...++...+++.+++..+ ...+++..||.|+.++|.|+.+++......||||||+|+|+.+++++++.++++++
T Consensus       144 ~~~~~~~~~d~~il~~~edi~~n~~~~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpGa~n~P~~~~~~~~g~~k~~ed  223 (286)
T KOG1529|consen  144 SPIVFVASLDNSILATLEDIPFNNLATKNFQYLDARSKGRFDGTEPEPRSGATGGHIPGAINFPFDEVLDPDGFIKPAED  223 (286)
T ss_pred             CCccchhhcchHHHHHHhhccccccccccceeeeccccccccccCCCCcccCcCccCCCcccCChHHhcccccccCCHHH
Confidence            23344455666677777877666 66678999999999999999999888889999999999999999999998888999


Q ss_pred             HHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       257 l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      ++.++...++..++|||+.|+.|..|+..+..|...| .++++|||||.+|..
T Consensus       224 l~~~f~~~~l~~~~p~~~sC~~Gisa~~i~~al~r~g-~~~~lYdGS~~Ew~~  275 (286)
T KOG1529|consen  224 LKHLFAQKGLKLSKPVIVSCGTGISASIIALALERSG-PDAKLYDGSWTEWAL  275 (286)
T ss_pred             HHHHHHhcCcccCCCEEEeeccchhHHHHHHHHHhcC-CCcceecccHHHHhh
Confidence            9999999999999999999999999999999999999 789999999999995

>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

Probab=99.90  E-value=4e-23  Score=168.23  Aligned_cols=119  Identities=37%  Similarity=0.544  Sum_probs=101.8

Q ss_pred             ccHHHHHHhcC----CCCeEEEEeecCCCCCCCCchhhhhh------------cCCcCceecCcccccccCCCCCCCCCC
Q 020963           24 VSVDWLHANLR----EPDLKVLDASWYMPDEQRNPFQEYQV------------AHIPGALFFDVDGVADRTTNLPHMLPS   87 (319)
Q Consensus        24 Is~~~l~~~l~----~~~~~iiDvR~~~~~~~r~~~~~~~~------------ghIpgAi~ip~~~l~~~~~~~~~~~~~   87 (319)
                      ||++||.++++    +++++|||+|+.+++. |+...+|..            ||||||+|+|+..+...+.....++|+
T Consensus         1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~-~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~~~~~~~p~   79 (138)
T cd01445           1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGT-REARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAGFEESMEPS   79 (138)
T ss_pred             CCHHHHHHHhhccccCCCeEEEEccCCCccC-cchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCCCCCCCCCC
Confidence            68999999998    4679999999654443 444478887            999999999988765555556678899


Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEcCC--CcchhHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963           88 EEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus        88 ~~~~~~~~~~~~i~~~~~vvly~~~--g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                      .++|++.+..+||+++++||+||..  ++..|++++|+|+.+|+++|++|+||+.+|+
T Consensus        80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG~~~W~  137 (138)
T cd01445          80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWF  137 (138)
T ss_pred             HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCCHHHhh
Confidence            9999999999999999999999974  4567999999999999999999999999996

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.

>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

Probab=99.90  E-value=3.9e-23  Score=163.86  Aligned_cols=118  Identities=51%  Similarity=0.959  Sum_probs=103.2

Q ss_pred             cCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 020963          192 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  271 (319)
Q Consensus       192 is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~  271 (319)
                      ++++++.+++++++++|||||+..+|.+....+...+..||||||+|+|+.++....+.|++.+++++.+...+++++++
T Consensus         1 ~s~~~l~~~l~~~~~~iiDvR~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (118)
T cd01449           1 VTAEEVLANLDSGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDEDGTFKSPEELRALFAALGITPDKP   80 (118)
T ss_pred             CCHHHHHHhcCCCCcEEEeCCCHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcCCCCCcCCHHHHHHHHHHcCCCCCCC
Confidence            46788888887667999999999999765443333335699999999999988776677889999999999999999999


Q ss_pred             EEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          272 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       272 vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      ||+||++|.+|..+++.|+.+|++++++|+||+.+|..
T Consensus        81 iv~yc~~g~~s~~~~~~l~~~G~~~v~~l~GG~~~W~~  118 (118)
T cd01449          81 VIVYCGSGVTACVLLLALELLGYKNVRLYDGSWSEWGS  118 (118)
T ss_pred             EEEECCcHHHHHHHHHHHHHcCCCCeeeeCChHHHhcC
Confidence            99999999999999999999999999999999999973

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.

>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

Probab=99.89  E-value=1.2e-22  Score=165.31  Aligned_cols=118  Identities=36%  Similarity=0.636  Sum_probs=98.7

Q ss_pred             cCHHHHHHHhh----cCCcEEEeccCC--------CcccCCCCCCC-CCCCccccCCCcccCcccccCCCC----CCCCH
Q 020963          192 WTLEQVKRNIE----EGTYQLVDARSK--------ARFDGDAPEPR-KGIRSGHVPGSKCIPFPQMLDASQ----TLLPA  254 (319)
Q Consensus       192 is~~~l~~~~~----~~~~~liDvR~~--------~e~~g~~~~~~-~~~~~ghIpgA~~ip~~~l~~~~~----~~~~~  254 (319)
                      ||++||.++++    +++++|||+|..        ++|.|...++. ...+.||||||+|+|+.++.+..+    .+.+.
T Consensus         1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~~~~~~~p~~   80 (138)
T cd01445           1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAGFEESMEPSE   80 (138)
T ss_pred             CCHHHHHHHhhccccCCCeEEEEccCCCccCcchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCCCCCCCCCCH
Confidence            57889999987    467999999987        88977544321 112459999999999988765443    45677


Q ss_pred             HHHHHHHHHcCCCCCCCEEEecCC---cHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          255 DELKKRFEQEGISLEKPVVTACGT---GVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       255 ~~l~~~l~~~~~~~~~~vivyC~~---G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      ++|++++.+.||+++++||+||.+   |..|++++++|+.+|+++|++|+|||.+|..
T Consensus        81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG~~~W~~  138 (138)
T cd01445          81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWFH  138 (138)
T ss_pred             HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCCHHHhhC
Confidence            899999999999999999999986   8999999999999999999999999999963

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=99.88  E-value=3.4e-23  Score=190.17  Aligned_cols=203  Identities=14%  Similarity=0.119  Sum_probs=145.4

Q ss_pred             ccccCCCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHH
Q 020963           12 YSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF   91 (319)
Q Consensus        12 ~~~~~~~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~   91 (319)
                      +...+.+++.++-++++|.+.+.. ...++|+|         +...|..+||+|++|+|...+.              .+
T Consensus         4 ~~v~~~Y~f~~i~~~~~~~~~l~~-~~~~~d~r---------g~i~~a~egIngtis~~~~~~~--------------~~   59 (314)
T PRK00142          4 YRVLLYYKYTPIEDPEAFRDEHLA-LCKSLGLK---------GRILVAEEGINGTVSGTIEQTE--------------AY   59 (314)
T ss_pred             cEEEEEEccccCCCHHHHHHHHHH-HHHHcCCe---------eEEEEcCCCceEEEEecHHHHH--------------HH
Confidence            444556777888899999998876 57789999         7889999999999999974332              33


Q ss_pred             HHHHHhCCCCCCCeEEEEcCCC-cchh----HHHHHHHHHhcCC-ceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhH
Q 020963           92 AAAVSALGLENKDGLVVYDGKG-IFSA----ARVWWMFRVFGHD-RVWVLDGGLPRWRASGYDVESSASGDAILKASAAS  165 (319)
Q Consensus        92 ~~~~~~~~i~~~~~vvly~~~g-~~~a----~~~~~~l~~~G~~-~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~  165 (319)
                      ..++...  ....++++....+ ....    .++...|..+|++ ++.-+.             .               
T Consensus        60 ~~~l~~~--~~~~~i~l~~~~~~~~~f~~l~~~~~~eLv~~G~d~~v~~~~-------------~---------------  109 (314)
T PRK00142         60 MAWLKAD--PRFADIRFKISEDDGHAFPRLSVKVRKEIVALGLDDDIDPLE-------------N---------------  109 (314)
T ss_pred             HHHHhhC--cCCCCceEEeccccCCCcccceeeeeeeeeecCCCCCCCccc-------------c---------------
Confidence            4444332  1234444432221 1111    3444455556653 332111             0               


Q ss_pred             HHHHHHhcCcccCCcccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCccccc
Q 020963          166 EAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML  245 (319)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~  245 (319)
                                            ....++++++.+.+.+++++|||||++.||           ..||||||+|+|+.++.
T Consensus       110 ----------------------~~~~is~~el~~~l~~~~~vlIDVR~~~E~-----------~~GhI~GAi~ip~~~~~  156 (314)
T PRK00142        110 ----------------------VGTYLKPKEVNELLDDPDVVFIDMRNDYEY-----------EIGHFENAIEPDIETFR  156 (314)
T ss_pred             ----------------------CCcccCHHHHHHHhcCCCeEEEECCCHHHH-----------hcCcCCCCEeCCHHHhh
Confidence                                  112678889999888888999999999999           68999999999998764


Q ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCC
Q 020963          246 DASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       246 ~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      +.      .+.+.   +..++.++++||+||.+|.||..++..|+..||++|+.|+||+.+|...
T Consensus       157 ~~------~~~l~---~~~~~~kdk~IvvyC~~G~Rs~~aa~~L~~~Gf~~V~~L~GGi~~w~~~  212 (314)
T PRK00142        157 EF------PPWVE---ENLDPLKDKKVVMYCTGGIRCEKASAWMKHEGFKEVYQLEGGIITYGED  212 (314)
T ss_pred             hh------HHHHH---HhcCCCCcCeEEEECCCCcHHHHHHHHHHHcCCCcEEEecchHHHHHHh
Confidence            21      11121   2345678999999999999999999999999999999999999999875

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=99.87  E-value=1.2e-21  Score=156.31  Aligned_cols=122  Identities=54%  Similarity=1.039  Sum_probs=100.7

Q ss_pred             cccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCC
Q 020963           23 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  102 (319)
Q Consensus        23 ~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~  102 (319)
                      +|++++|.+++.+++++|||+|.....  .....+|..||||||+|+|+..+.........++++.++|++.+..+++++
T Consensus         1 ~i~~~~l~~~l~~~~~~ivDvR~~~~~--~~~~~~~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (122)
T cd01448           1 LVSPDWLAEHLDDPDVRILDARWYLPD--RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLGISN   78 (122)
T ss_pred             CcCHHHHHHHhCCCCeEEEEeecCCCC--CchhhHHhhCCCCCCEEcChhhccccCCCCCCCCCCHHHHHHHHHHcCCCC
Confidence            589999999998878999999921111  001278999999999999988765432234567889999999999999999


Q ss_pred             CCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCC
Q 020963          103 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus       103 ~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  146 (319)
                      +++|||||+.++.+++++++.|+.+||++|++|+||+.+|..+|
T Consensus        79 ~~~vv~~c~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  122 (122)
T cd01448          79 DDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAWKAEG  122 (122)
T ss_pred             CCEEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHhCc
Confidence            99999999886567999999999999999999999999998765

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=99.87  E-value=1.3e-21  Score=163.50  Aligned_cols=136  Identities=16%  Similarity=0.193  Sum_probs=102.6

Q ss_pred             ccccccCccc--cccCCCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhh---------cCCcCceecCc
Q 020963            3 SLAAGRRADY--STLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV---------AHIPGALFFDV   71 (319)
Q Consensus         3 ~~~~~~~~~~--~~~~~~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~---------ghIpgAi~ip~   71 (319)
                      +++.++++.|  +..+.......|+++|+.+++++++++|||||.....     ..+|..         +|||||+|+|+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~vs~~el~~~l~~~~~~lIDVR~~~~~-----~~e~~~G~~~~~~~~~HIPGAv~ip~   89 (162)
T TIGR03865        15 EPEGYRTDHYRAPVPATLKGARVLDTEAAQALLARGPVALIDVYPRPPK-----PKNLLEGTVWRDEPRLNIPGSLWLPN   89 (162)
T ss_pred             CCcccccccccCCCCcccCCccccCHHHHHHHHhCCCcEEEECCCCccc-----cccccccceeccccCCCCCCcEEecc
Confidence            4567777777  4445566689999999999998878999999921100     013333         59999999996


Q ss_pred             ccccccCCCCCCCCCCHHHHHHHHHhCCC-CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCc
Q 020963           72 DGVADRTTNLPHMLPSEEAFAAAVSALGL-ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  149 (319)
Q Consensus        72 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~  149 (319)
                      ..+....      -+..+.|.+.+...++ +++++||+||.+|+.++.++++.|+.+||++|++|+||+.+|+.+|+|+
T Consensus        90 ~~~~~l~------~~~~~~~~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~G~~~V~~l~GG~~aW~~aG~Pv  162 (162)
T TIGR03865        90 TGYGNLA------PAWQAYFRRGLERATGGDKDRPLVFYCLADCWMSWNAAKRALAYGYSNVYWYPDGTDGWQAAGLPL  162 (162)
T ss_pred             cCCCCCC------CchhHHHHHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhcCCcceEEecCCHHHHHHcCCCC
Confidence            4322211      1233457777766654 7899999999988767889999999999999999999999999999985

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=99.87  E-value=9.1e-22  Score=157.00  Aligned_cols=109  Identities=24%  Similarity=0.402  Sum_probs=97.7

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCC-------CcccCCCCCCCCCCCccccCCCcccCcccccC----CCCCCCCHHHHHH
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSK-------ARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD----ASQTLLPADELKK  259 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~-------~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~----~~~~~~~~~~l~~  259 (319)
                      +++++++.+.+.+++++|||+|++       .+|           ..||||||+|+|+.++..    ..+.+.+.+++++
T Consensus         1 ~i~~~~l~~~l~~~~~~ivDvR~~~~~~~~~~~~-----------~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~   69 (122)
T cd01448           1 LVSPDWLAEHLDDPDVRILDARWYLPDRDGRKEY-----------LEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAE   69 (122)
T ss_pred             CcCHHHHHHHhCCCCeEEEEeecCCCCCchhhHH-----------hhCCCCCCEEcChhhccccCCCCCCCCCCHHHHHH
Confidence            367889999988777899999999       556           679999999999988764    2457889999999


Q ss_pred             HHHHcCCCCCCCEEEecCC-cHHHHHHHHHHHhcCCCCceeeeCcHHHHhCC
Q 020963          260 RFEQEGISLEKPVVTACGT-GVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~-G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      .+...+++++++|||||++ |.+|+.+++.|+.+||++|++|+|||.+|...
T Consensus        70 ~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~  121 (122)
T cd01448          70 LLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAWKAE  121 (122)
T ss_pred             HHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHhC
Confidence            9999999999999999999 59999999999999999999999999999876

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=99.85  E-value=1.6e-21  Score=151.59  Aligned_cols=104  Identities=30%  Similarity=0.534  Sum_probs=91.6

Q ss_pred             CHHHHHHHhh-cCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 020963          193 TLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  271 (319)
Q Consensus       193 s~~~l~~~~~-~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~  271 (319)
                      |++++.+.++ .++++|||+|++.+|           ..||||||+|+|+.++.+.  .+.++++|++.+...+++++++
T Consensus         2 ~~~~~~~~l~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   68 (106)
T cd01519           2 SFEEVKNLPNPHPNKVLIDVREPEEL-----------KTGKIPGAINIPLSSLPDA--LALSEEEFEKKYGFPKPSKDKE   68 (106)
T ss_pred             cHHHHHHhcCCCCCEEEEECCCHHHH-----------hcCcCCCcEEechHHhhhh--hCCCHHHHHHHhcccCCCCCCe
Confidence            4677888877 667999999999999           6899999999999886542  3456788999998888899999


Q ss_pred             EEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          272 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       272 vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      ||+||.+|.+|..+++.|..+||++|++|+||+.+|..
T Consensus        69 ivv~c~~g~~s~~~~~~l~~~G~~~v~~~~Gg~~~W~~  106 (106)
T cd01519          69 LIFYCKAGVRSKAAAELARSLGYENVGNYPGSWLDWAA  106 (106)
T ss_pred             EEEECCCcHHHHHHHHHHHHcCCccceecCCcHHHHcC
Confidence            99999999999999999999999999999999999963

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>PLN02160 thiosulfate sulfurtransferase

Probab=99.85  E-value=4.8e-21  Score=155.60  Aligned_cols=111  Identities=18%  Similarity=0.301  Sum_probs=93.6

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCC--cccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA--~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      .++++++.+.++. +..|||||++.||           ..||||||  +|+|+..+. ....+++.+.+..+..  .+++
T Consensus        16 ~i~~~e~~~~~~~-~~~lIDVR~~~E~-----------~~ghIpgA~~iniP~~~~~-~~~~l~~~~~~~~~~~--~~~~   80 (136)
T PLN02160         16 SVDVSQAKTLLQS-GHQYLDVRTQDEF-----------RRGHCEAAKIVNIPYMLNT-PQGRVKNQEFLEQVSS--LLNP   80 (136)
T ss_pred             EeCHHHHHHHHhC-CCEEEECCCHHHH-----------hcCCCCCcceecccchhcC-cccccCCHHHHHHHHh--ccCC
Confidence            6788999888875 4689999999999           67999999  899986653 3445666555554433  4678


Q ss_pred             CCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      +++||+||++|.||..++..|...||.+|++|.|||.+|...+ +|+.+
T Consensus        81 ~~~IivyC~sG~RS~~Aa~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~  128 (136)
T PLN02160         81 ADDILVGCQSGARSLKATTELVAAGYKKVRNKGGGYLAWVDHS-FPINQ  128 (136)
T ss_pred             CCcEEEECCCcHHHHHHHHHHHHcCCCCeeecCCcHHHHhhCC-CCccc
Confidence            9999999999999999999999999999999999999999995 99986

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=99.85  E-value=4.1e-21  Score=174.90  Aligned_cols=127  Identities=17%  Similarity=0.282  Sum_probs=104.8

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCCHHHHHHHHHHcC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQEG  265 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~~~l~~~l~~~~  265 (319)
                      .+|+++||.+++++++++|||+|+..++.|.... ...++.||||||+|+|+..+....    ..+.++++|+++++++|
T Consensus         5 ~lvs~~~l~~~l~~~~~~iiD~R~~~~~~~~~~~-~~~y~~GHIpGA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G   83 (281)
T PRK11493          5 WFVAADWLAEHIDDPEIQIIDARMAPPGQEDRDV-AAEYRAGHIPGAVFFDIEALSDHTSPLPHMMPRPETFAVAMRELG   83 (281)
T ss_pred             cccCHHHHHHhcCCCCeEEEEeeCCCCCccccch-HHHHHhCcCCCCEEcCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            5899999999999888999999985554432100 112268999999999998765533    24567899999999999


Q ss_pred             CCCCCCEEEecCCcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          266 ISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       266 ~~~~~~vivyC~~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++++++||+||.+|. .|+++++.|+.+|+++|++|+||+.+|..++ +|++++
T Consensus        84 i~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g-~p~~~~  136 (281)
T PRK11493         84 VNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGWQRDD-LLLEEG  136 (281)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCCHHHHHHcC-CCccCC
Confidence            999999999999876 5778899999999999999999999999995 998875

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.84  E-value=4.6e-21  Score=148.87  Aligned_cols=114  Identities=26%  Similarity=0.407  Sum_probs=98.2

Q ss_pred             ccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          189 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      ...++.+++..+++.+++++||||+++||           +.||||.++|||+...... +.++ ..+|.+.+.....+.
T Consensus        22 ~~sv~~~qvk~L~~~~~~~llDVRepeEf-----------k~gh~~~siNiPy~~~~~~-~~l~-~~eF~kqvg~~kp~~   88 (136)
T KOG1530|consen   22 PQSVSVEQVKNLLQHPDVVLLDVREPEEF-----------KQGHIPASINIPYMSRPGA-GALK-NPEFLKQVGSSKPPH   88 (136)
T ss_pred             cEEEEHHHHHHHhcCCCEEEEeecCHHHh-----------hccCCcceEeccccccccc-cccC-CHHHHHHhcccCCCC
Confidence            45889999999999888999999999999           8999999999999554332 2333 466777777777778


Q ss_pred             CCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCc
Q 020963          269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                      ++.|||+|.+|.|+..|...|..+||+||.+|.|||.+|.+.+ .|..
T Consensus        89 d~eiIf~C~SG~Rs~~A~~~l~s~Gyknv~ny~Gs~~~W~~k~-~~~~  135 (136)
T KOG1530|consen   89 DKEIIFGCASGVRSLKATKILVSAGYKNVGNYPGSYLAWVDKG-GPKK  135 (136)
T ss_pred             CCcEEEEeccCcchhHHHHHHHHcCcccccccCccHHHHHHcc-CCCC
Confidence            8899999999999999999999999999999999999999996 6653

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=99.84  E-value=9.4e-21  Score=148.20  Aligned_cols=98  Identities=19%  Similarity=0.266  Sum_probs=84.8

Q ss_pred             cccCHHHHHHHhhcC-CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          190 LIWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       190 ~~is~~~l~~~~~~~-~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      ..++++++.+.+..+ +.+|||||++.||           ..||||||+|+|+.++             ...+.....++
T Consensus        10 ~~i~~~~l~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgainip~~~l-------------~~~~~~l~~~~   65 (109)
T cd01533          10 PSVSADELAALQARGAPLVVLDGRRFDEY-----------RKMTIPGSVSCPGAEL-------------VLRVGELAPDP   65 (109)
T ss_pred             CcCCHHHHHHHHhcCCCcEEEeCCCHHHH-----------hcCcCCCceeCCHHHH-------------HHHHHhcCCCC
Confidence            478899999988755 5789999999999           6899999999999554             34455556677


Q ss_pred             CCCEEEecCCcHHHHHHHHHHHhcCCCC-ceeeeCcHHHHhCCC
Q 020963          269 EKPVVTACGTGVTACILALGLNRLGKHD-VAVYDGSWTEWGAQP  311 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~L~~~G~~~-v~~~~Gg~~~W~~~~  311 (319)
                      +++|||||++|.||..+++.|+.+||+| ++.++||+.+|..+|
T Consensus        66 ~~~ivv~C~~G~rs~~a~~~L~~~G~~~~v~~l~gG~~~W~~~g  109 (109)
T cd01533          66 RTPIVVNCAGRTRSIIGAQSLINAGLPNPVAALRNGTQGWTLAG  109 (109)
T ss_pred             CCeEEEECCCCchHHHHHHHHHHCCCCcceeEecCCHHHHHhcC
Confidence            8999999999999999999999999988 999999999999763

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=99.83  E-value=2.3e-20  Score=156.01  Aligned_cols=121  Identities=18%  Similarity=0.245  Sum_probs=92.1

Q ss_pred             CCccccCHHHHHHHhhcCCcEEEeccCCC----ccc-CCCCCCCCCCCccccCCCcccCcccccCCCCCCCC--HHHHHH
Q 020963          187 QPHLIWTLEQVKRNIEEGTYQLVDARSKA----RFD-GDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP--ADELKK  259 (319)
Q Consensus       187 ~~~~~is~~~l~~~~~~~~~~liDvR~~~----e~~-g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~--~~~l~~  259 (319)
                      .....|+++|+.+++++++.+|||||+..    +|. |.....   ...+|||||+|+|+..+.    .+.+  .+.+.+
T Consensus        33 ~~~~~vs~~el~~~l~~~~~~lIDVR~~~~~~~e~~~G~~~~~---~~~~HIPGAv~ip~~~~~----~l~~~~~~~~~~  105 (162)
T TIGR03865        33 KGARVLDTEAAQALLARGPVALIDVYPRPPKPKNLLEGTVWRD---EPRLNIPGSLWLPNTGYG----NLAPAWQAYFRR  105 (162)
T ss_pred             CCccccCHHHHHHHHhCCCcEEEECCCCccccccccccceecc---ccCCCCCCcEEecccCCC----CCCCchhHHHHH
Confidence            34568999999999988889999999876    331 210000   023699999999974321    2222  244667


Q ss_pred             HHHHcCC-CCCCCEEEecCCcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCC
Q 020963          260 RFEQEGI-SLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  315 (319)
Q Consensus       260 ~l~~~~~-~~~~~vivyC~~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~  315 (319)
                      .+.+.+. +++++||+||++|. +|..+++.|+.+||.+|++|+||+.+|..+| +|+
T Consensus       106 ~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~G~~~V~~l~GG~~aW~~aG-~Pv  162 (162)
T TIGR03865       106 GLERATGGDKDRPLVFYCLADCWMSWNAAKRALAYGYSNVYWYPDGTDGWQAAG-LPL  162 (162)
T ss_pred             HHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhcCCcceEEecCCHHHHHHcC-CCC
Confidence            7766554 79999999999996 8999999999999999999999999999995 886

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=99.83  E-value=1.7e-20  Score=144.68  Aligned_cols=99  Identities=16%  Similarity=0.188  Sum_probs=82.8

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .|+++++.+.++.++++|||||++.||           ..||||||+|+|+..+...      ...+.+.+   .+++++
T Consensus         3 ~is~~~l~~~~~~~~~~iiDvR~~~e~-----------~~ghi~gA~~ip~~~~~~~------~~~~~~~~---~~~~~~   62 (101)
T cd01518           3 YLSPAEWNELLEDPEVVLLDVRNDYEY-----------DIGHFKGAVNPDVDTFREF------PFWLDENL---DLLKGK   62 (101)
T ss_pred             cCCHHHHHHHHcCCCEEEEEcCChhhh-----------hcCEeccccCCCcccHhHh------HHHHHhhh---hhcCCC
Confidence            678899999888778999999999999           6899999999999775321      11222222   247899


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      +|||||++|.||..++..|..+||++|++++||+.+|..
T Consensus        63 ~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~  101 (101)
T cd01518          63 KVLMYCTGGIRCEKASAYLKERGFKNVYQLKGGILKYLE  101 (101)
T ss_pred             EEEEECCCchhHHHHHHHHHHhCCcceeeechhHHHHhC
Confidence            999999999999999999999999999999999999963

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=99.83  E-value=3.1e-20  Score=144.26  Aligned_cols=104  Identities=21%  Similarity=0.308  Sum_probs=90.3

Q ss_pred             cHHHHHHhcC-CCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCC
Q 020963           25 SVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  103 (319)
Q Consensus        25 s~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  103 (319)
                      |++++.++++ .++++|||+|         +..+|..||||||+|+|+..+..      ....+.+.|.+.++..+++++
T Consensus         2 ~~~~~~~~l~~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~~~~------~~~~~~~~~~~~~~~~~~~~~   66 (106)
T cd01519           2 SFEEVKNLPNPHPNKVLIDVR---------EPEELKTGKIPGAINIPLSSLPD------ALALSEEEFEKKYGFPKPSKD   66 (106)
T ss_pred             cHHHHHHhcCCCCCEEEEECC---------CHHHHhcCcCCCcEEechHHhhh------hhCCCHHHHHHHhcccCCCCC
Confidence            6789999988 6679999999         77899999999999999877532      123567789999998899999


Q ss_pred             CeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963          104 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus       104 ~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      ++||+||..|. ++.++++.|+.+||++|++|+||+.+|.+
T Consensus        67 ~~ivv~c~~g~-~s~~~~~~l~~~G~~~v~~~~Gg~~~W~~  106 (106)
T cd01519          67 KELIFYCKAGV-RSKAAAELARSLGYENVGNYPGSWLDWAA  106 (106)
T ss_pred             CeEEEECCCcH-HHHHHHHHHHHcCCccceecCCcHHHHcC
Confidence            99999998876 48899999999999999999999999963

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

Probab=99.82  E-value=3.6e-20  Score=146.78  Aligned_cols=107  Identities=27%  Similarity=0.490  Sum_probs=92.6

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhh-----------cCCcCceecCcccccccCCCCCCCCCCHHHHH
Q 020963           24 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV-----------AHIPGALFFDVDGVADRTTNLPHMLPSEEAFA   92 (319)
Q Consensus        24 Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~-----------ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~   92 (319)
                      ||+++|.+++++++++|||||         +..+|..           ||||||+|+|+..+....    ..+++.+.|.
T Consensus         1 ~s~~~l~~~l~~~~~~iiDvR---------~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~~~----~~~~~~~~~~   67 (118)
T cd01449           1 VTAEEVLANLDSGDVQLVDAR---------SPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDED----GTFKSPEELR   67 (118)
T ss_pred             CCHHHHHHhcCCCCcEEEeCC---------CHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcCCC----CCcCCHHHHH
Confidence            588999999987679999999         5667765           999999999998765422    4567889999


Q ss_pred             HHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963           93 AAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus        93 ~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      +.+..++++++++||+||..|. ++.++++.|+.+||++|++|+||+.+|.+
T Consensus        68 ~~~~~~~~~~~~~iv~yc~~g~-~s~~~~~~l~~~G~~~v~~l~GG~~~W~~  118 (118)
T cd01449          68 ALFAALGITPDKPVIVYCGSGV-TACVLLLALELLGYKNVRLYDGSWSEWGS  118 (118)
T ss_pred             HHHHHcCCCCCCCEEEECCcHH-HHHHHHHHHHHcCCCCeeeeCChHHHhcC
Confidence            9999999999999999998754 58999999999999999999999999963

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=99.82  E-value=2.8e-20  Score=142.81  Aligned_cols=97  Identities=20%  Similarity=0.363  Sum_probs=84.9

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .++++++.+.++++ .+|||+|++++|           ..||||||+|+|+..+....               ..+++++
T Consensus         3 ~i~~~el~~~~~~~-~~liDvR~~~e~-----------~~~hi~ga~~ip~~~~~~~~---------------~~~~~~~   55 (99)
T cd01527           3 TISPNDACELLAQG-AVLVDIREPDEY-----------LRERIPGARLVPLSQLESEG---------------LPLVGAN   55 (99)
T ss_pred             ccCHHHHHHHHHCC-CEEEECCCHHHH-----------HhCcCCCCEECChhHhcccc---------------cCCCCCC
Confidence            57889999988765 899999999999           68999999999998764321               1467899


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  315 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~  315 (319)
                      +||+||.+|.+|..++..|..+||.++++++||+.+|...+ +|+
T Consensus        56 ~iv~~c~~g~~s~~~~~~L~~~g~~~v~~l~gG~~~W~~~~-~~~   99 (99)
T cd01527          56 AIIFHCRSGMRTQQNAERLAAISAGEAYVLEGGLDAWKAAG-LPV   99 (99)
T ss_pred             cEEEEeCCCchHHHHHHHHHHcCCccEEEeeCCHHHHHHCc-CCC
Confidence            99999999999999999999999999999999999999985 875

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=99.82  E-value=9.2e-20  Score=142.56  Aligned_cols=99  Identities=26%  Similarity=0.268  Sum_probs=84.7

Q ss_pred             CCcccHHHHHHhcCCC-CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           21 EPVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~-~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      .+.|++++|.++++++ +++|||||         +..+|..||||||+|+|+..                 |...+..++
T Consensus         9 ~~~i~~~~l~~~~~~~~~~~liDvR---------~~~e~~~ghIpgainip~~~-----------------l~~~~~~l~   62 (109)
T cd01533           9 TPSVSADELAALQARGAPLVVLDGR---------RFDEYRKMTIPGSVSCPGAE-----------------LVLRVGELA   62 (109)
T ss_pred             CCcCCHHHHHHHHhcCCCcEEEeCC---------CHHHHhcCcCCCceeCCHHH-----------------HHHHHHhcC
Confidence            4689999999998765 58999999         78999999999999999853                 334556666


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCc-eEEecCCHHHHHhCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLPRWRASG  146 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~-v~~l~GG~~~W~~~g  146 (319)
                      .+++++||+||..|.+ +..+++.|+.+||++ |+.|+||+.+|..+|
T Consensus        63 ~~~~~~ivv~C~~G~r-s~~a~~~L~~~G~~~~v~~l~gG~~~W~~~g  109 (109)
T cd01533          63 PDPRTPIVVNCAGRTR-SIIGAQSLINAGLPNPVAALRNGTQGWTLAG  109 (109)
T ss_pred             CCCCCeEEEECCCCch-HHHHHHHHHHCCCCcceeEecCCHHHHHhcC
Confidence            6778999999987765 788999999999988 999999999999875

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=99.82  E-value=4.9e-20  Score=170.52  Aligned_cols=119  Identities=22%  Similarity=0.351  Sum_probs=103.1

Q ss_pred             CccccCHHHHHHHhhcCCcEEEeccC---------CCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCCH
Q 020963          188 PHLIWTLEQVKRNIEEGTYQLVDARS---------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPA  254 (319)
Q Consensus       188 ~~~~is~~~l~~~~~~~~~~liDvR~---------~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~  254 (319)
                      +..+|+++||.+++++++++|||+|.         ..+|           ..||||||+|+|+.++.+..    ..+.+.
T Consensus        20 ~~~lvs~~~L~~~l~~~~~~IiDvr~~~~~~~r~~~~~y-----------~~gHIPgAi~i~~~~~~~~~~~~~~~lp~~   88 (320)
T PLN02723         20 NEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEY-----------QVAHIPGALFFDLDGISDRTTDLPHMLPSE   88 (320)
T ss_pred             CCceecHHHHHHHhcCCCeEEEEeeccccCCCCchHHHH-----------HhccCCCCeecCHHHhcCCCCCcCCCCCCH
Confidence            45699999999999888899999972         2456           68999999999998766532    346788


Q ss_pred             HHHHHHHHHcCCCCCCCEEEecCCcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          255 DELKKRFEQEGISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       255 ~~l~~~l~~~~~~~~~~vivyC~~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++|+++|+++|++++++|||||..|. .++++++.|+.+|+++|++|+||+.+|..+| +|++++
T Consensus        89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~~~W~~~G-~pv~~~  152 (320)
T PLN02723         89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGLPKWRASG-YDVESS  152 (320)
T ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCHHHHHHcC-CCcccC
Confidence            99999999999999999999998775 6778899999999999999999999999995 999864

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=99.81  E-value=9.5e-20  Score=142.24  Aligned_cols=102  Identities=25%  Similarity=0.339  Sum_probs=89.3

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      ..++++++.+.++.++..|||+|++.+|           ..||||||+|+|+..             |...+.  .++++
T Consensus         5 ~~is~~el~~~l~~~~~~ivDvR~~~e~-----------~~ghi~gA~~ip~~~-------------l~~~~~--~~~~~   58 (108)
T PRK00162          5 ECINVEQAHQKLQEGGAVLVDIRDPQSF-----------AMGHAPGAFHLTNDS-------------LGAFMR--QADFD   58 (108)
T ss_pred             cccCHHHHHHHHHcCCCEEEEcCCHHHH-----------hcCCCCCCeECCHHH-------------HHHHHH--hcCCC
Confidence            3688999999887777899999999999           689999999999844             444555  46789


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++|++||.+|.+|..++..|+..||.|+++++||+.+|...+ +|++..
T Consensus        59 ~~ivv~c~~g~~s~~a~~~L~~~G~~~v~~l~GG~~~w~~~~-~~~~~~  106 (108)
T PRK00162         59 TPVMVMCYHGNSSQGAAQYLLQQGFDVVYSIDGGFEAWRRTF-PAEVAS  106 (108)
T ss_pred             CCEEEEeCCCCCHHHHHHHHHHCCchheEEecCCHHHHHhcC-CCccCC
Confidence            999999999999999999999999999999999999999995 998863

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=99.81  E-value=6.9e-20  Score=181.85  Aligned_cols=117  Identities=22%  Similarity=0.306  Sum_probs=104.9

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCC----CCCCCCHHHHHHHHHHcC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA----SQTLLPADELKKRFEQEG  265 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~----~~~~~~~~~l~~~l~~~~  265 (319)
                      .+|+++||.+++++++++|||+|+.++|           ..||||||+|+|+..+...    .+.|.+.++|++.+.++|
T Consensus         9 ~lIs~~eL~~~l~~~~vvIIDvR~~~eY-----------~~GHIPGAv~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~lG   77 (610)
T PRK09629          9 LVIEPNDLLERLDAPELILVDLTSSARY-----------EAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELG   77 (610)
T ss_pred             ceecHHHHHHHhcCCCEEEEECCChHHH-----------HhCCCCCcEEcChhHhhccCCCCCCCCCCHHHHHHHHHHcC
Confidence            4899999999999888999999999999           6899999999998764321    256778899999999999


Q ss_pred             CCCCCCEEEecCCc-HHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          266 ISLEKPVVTACGTG-VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       266 ~~~~~~vivyC~~G-~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++++++|||||++| .+|++++|.|+.+|+++|++|+||+.+|..++ +|++++
T Consensus        78 I~~d~~VVvYd~~g~~~A~R~~w~L~~~G~~~V~iLdGG~~aW~~ag-~p~~~~  130 (610)
T PRK09629         78 HNPDAVYVVYDDEGGGWAGRFIWLLDVIGHSGYHYLDGGVLAWEAQA-LPLSTD  130 (610)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHcCCCCEEEcCCCHHHHHHcC-CccccC
Confidence            99999999999976 68999999999999999999999999999995 998764

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=99.81  E-value=3.4e-19  Score=163.17  Aligned_cols=193  Identities=16%  Similarity=0.234  Sum_probs=127.3

Q ss_pred             CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCC--------------HHHHHHHHHhC--CC
Q 020963           37 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS--------------EEAFAAAVSAL--GL  100 (319)
Q Consensus        37 ~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~--~i  100 (319)
                      ..+|||||         .+.+|..||||||+|+|+....... ....+.+.              ...+...+...  -.
T Consensus         2 ~~~liDVR---------sp~Ef~~ghipgAiniPl~~~~er~-~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~~   71 (311)
T TIGR03167         2 FDPLIDVR---------SPAEFAEGHLPGAINLPLLNDEERA-EVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAFA   71 (311)
T ss_pred             CCEEEECC---------CHHHHhcCCCcCCEecccccchhhh-hhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhhc
Confidence            46899999         7899999999999999985321100 00000000              00122222221  12


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCCc
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT  180 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (319)
                      +++..||+||+.++.+|..+++.|+.+|| +|.+|+||+.+|...+.+.....+                       .+.
T Consensus        72 ~~~~~vvvyC~~gG~RS~~aa~~L~~~G~-~v~~L~GG~~aw~~~~~~~~~~~~-----------------------~~~  127 (311)
T TIGR03167        72 DGPPQPLLYCWRGGMRSGSLAWLLAQIGF-RVPRLEGGYKAYRRFVIDQLEELP-----------------------QPF  127 (311)
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHcCC-CEEEecChHHHHHHhhhhhhhccC-----------------------CCC
Confidence            34445999997655569999999999999 699999999999999886665421                       111


Q ss_pred             ccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccC-CCcccCcccccCCCCCCCCHHHHHH
Q 020963          181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVP-GSKCIPFPQMLDASQTLLPADELKK  259 (319)
Q Consensus       181 ~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIp-gA~~ip~~~l~~~~~~~~~~~~l~~  259 (319)
                      .+.. +.+...+...++++.+...+++|||+|+..+|.|.        ..|||| +.  -|....+        ...|..
T Consensus       128 ~~~v-l~g~tg~gKt~Ll~~L~~~~~~VvDlr~~a~hrGs--------~fG~~~~~~--qpsq~~f--------e~~L~~  188 (311)
T TIGR03167       128 PLIV-LGGMTGSGKTELLHALANAGAQVLDLEGLANHRGS--------SFGALGLGP--QPSQKRF--------ENALAE  188 (311)
T ss_pred             ceec-cCCCCCcCHHHHHHHHhcCCCeEEECCchHHhcCc--------ccCCCCCCC--CCchHHH--------HHHHHH
Confidence            2222 33456788999999998888999999999999765        358888 42  2332222        134444


Q ss_pred             HHHHcCCCCCCCEEEecCCcHHHHH
Q 020963          260 RFEQEGISLEKPVVTACGTGVTACI  284 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~G~ra~~  284 (319)
                      .|.  .+++.++|++-|.+..-+.+
T Consensus       189 ~l~--~~~~~~~i~~e~es~~ig~~  211 (311)
T TIGR03167       189 ALR--RLDPGRPIFVEDESRRIGRV  211 (311)
T ss_pred             HHH--hCCCCceEEEEeCchhhccc
Confidence            454  56778899999987654443

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily

Probab=99.81  E-value=6.7e-20  Score=147.54  Aligned_cols=105  Identities=24%  Similarity=0.390  Sum_probs=83.1

Q ss_pred             cCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCC---------CCC--------CCCH
Q 020963          192 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA---------SQT--------LLPA  254 (319)
Q Consensus       192 is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~---------~~~--------~~~~  254 (319)
                      ||++|+.++++ .+.+|||||++.||           ..||||||+|||+..+...         .+.        ....
T Consensus         1 ~s~~el~~~l~-~~~~iiDvR~~~e~-----------~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (128)
T cd01520           1 ITAEDLLALRK-ADGPLIDVRSPKEF-----------FEGHLPGAINLPLLDDEERALVGTLYKQQGREAAIELGLELVS   68 (128)
T ss_pred             CCHHHHHHHHh-cCCEEEECCCHHHh-----------ccCcCCCcEEccCCChhHHHHhhhheeccCHHHHHHHHHHHHh
Confidence            57889998887 57899999999999           6899999999999654321         110        0011


Q ss_pred             HHHHHHHHH---cCCCCCCCEEEecC-CcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          255 DELKKRFEQ---EGISLEKPVVTACG-TGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       255 ~~l~~~l~~---~~~~~~~~vivyC~-~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      ..++++++.   .+++++++||+||+ +|.||..+++.|+.+|| ++++++||+.+|..
T Consensus        69 ~~~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~-~v~~L~GG~~aw~~  126 (128)
T cd01520          69 GKLKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESLGI-DVPLLEGGYKAYRK  126 (128)
T ss_pred             hhHHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHcCC-ceeEeCCcHHHHHh
Confidence            234444443   48999999999997 68999999999999999 59999999999975

This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=99.81  E-value=1.1e-19  Score=140.11  Aligned_cols=99  Identities=22%  Similarity=0.319  Sum_probs=80.1

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCC
Q 020963           22 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  101 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~  101 (319)
                      ..|+++++.+++++++++|||||         +..+|..||||||+|+|+..+...          .+.+.+.+   ..+
T Consensus         2 ~~is~~~l~~~~~~~~~~iiDvR---------~~~e~~~ghi~gA~~ip~~~~~~~----------~~~~~~~~---~~~   59 (101)
T cd01518           2 TYLSPAEWNELLEDPEVVLLDVR---------NDYEYDIGHFKGAVNPDVDTFREF----------PFWLDENL---DLL   59 (101)
T ss_pred             CcCCHHHHHHHHcCCCEEEEEcC---------ChhhhhcCEeccccCCCcccHhHh----------HHHHHhhh---hhc
Confidence            47899999999987789999999         778999999999999998765321          11122111   236


Q ss_pred             CCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963          102 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus       102 ~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                      ++++||+||..|.+ +..+++.|+.+||++|++|+||+.+|.
T Consensus        60 ~~~~ivvyC~~G~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~  100 (101)
T cd01518          60 KGKKVLMYCTGGIR-CEKASAYLKERGFKNVYQLKGGILKYL  100 (101)
T ss_pred             CCCEEEEECCCchh-HHHHHHHHHHhCCcceeeechhHHHHh
Confidence            88999999988765 677788899999999999999999996

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily

Probab=99.80  E-value=8.4e-20  Score=145.75  Aligned_cols=105  Identities=20%  Similarity=0.292  Sum_probs=87.8

Q ss_pred             cccCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH-HHHHcCCC
Q 020963          190 LIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK-RFEQEGIS  267 (319)
Q Consensus       190 ~~is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~-~l~~~~~~  267 (319)
                      ..|+++++.+.++. .+++|||+|++.||           ..||||||+|||+..+.+....      +.. ++...+++
T Consensus         8 ~~is~~el~~~~~~~~~~~ivDvR~~~e~-----------~~~hIpgai~ip~~~~~~~~~~------~~~~~~~~~~~~   70 (122)
T cd01526           8 ERVSVKDYKNILQAGKKHVLLDVRPKVHF-----------EICRLPEAINIPLSELLSKAAE------LKSLQELPLDND   70 (122)
T ss_pred             cccCHHHHHHHHhCCCCeEEEEcCCHHHh-----------hcccCCCCeEccHHHHhhhhhh------hhhhhhcccccC
Confidence            47889999988876 57889999999999           6899999999999886543221      111 23344678


Q ss_pred             CCCCEEEecCCcHHHHHHHHHHHhcCC-CCceeeeCcHHHHhCCC
Q 020963          268 LEKPVVTACGTGVTACILALGLNRLGK-HDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       268 ~~~~vivyC~~G~ra~~~~~~L~~~G~-~~v~~~~Gg~~~W~~~~  311 (319)
                      ++++||+||++|.||..++..|+.+|| .++++|+||+.+|..+.
T Consensus        71 ~~~~ivv~C~~G~rs~~aa~~L~~~G~~~~v~~l~GG~~~W~~~~  115 (122)
T cd01526          71 KDSPIYVVCRRGNDSQTAVRKLKELGLERFVRDIIGGLKAWADKV  115 (122)
T ss_pred             CCCcEEEECCCCCcHHHHHHHHHHcCCccceeeecchHHHHHHHh
Confidence            999999999999999999999999999 78999999999999875

This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.

>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily

Probab=99.80  E-value=3.2e-19  Score=143.58  Aligned_cols=110  Identities=22%  Similarity=0.351  Sum_probs=82.0

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCC-------C-------CCCCC--CC
Q 020963           24 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT-------N-------LPHML--PS   87 (319)
Q Consensus        24 Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~-------~-------~~~~~--~~   87 (319)
                      ||++||.++++ ++++|||||         ...+|..||||||+|+|+..+.....       .       ++..+  +.
T Consensus         1 ~s~~el~~~l~-~~~~iiDvR---------~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (128)
T cd01520           1 ITAEDLLALRK-ADGPLIDVR---------SPKEFFEGHLPGAINLPLLDDEERALVGTLYKQQGREAAIELGLELVSGK   70 (128)
T ss_pred             CCHHHHHHHHh-cCCEEEECC---------CHHHhccCcCCCcEEccCCChhHHHHhhhheeccCHHHHHHHHHHHHhhh
Confidence            78999999998 478999999         78999999999999999864321100       0       00001  11


Q ss_pred             HHHHHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963           88 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus        88 ~~~~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      .+++.+.+...+++++++||+||..++.++.+++|+|+.+|| +|++|+||+.+|+.
T Consensus        71 ~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~-~v~~L~GG~~aw~~  126 (128)
T cd01520          71 LKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESLGI-DVPLLEGGYKAYRK  126 (128)
T ss_pred             HHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHcCC-ceeEeCCcHHHHHh
Confidence            123333333358999999999997555569999999999999 69999999999974

This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.

>smart00450 RHOD Rhodanese Homology Domain

Probab=99.79  E-value=3.3e-19  Score=135.74  Aligned_cols=98  Identities=33%  Similarity=0.585  Sum_probs=84.7

Q ss_pred             CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHH
Q 020963          204 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC  283 (319)
Q Consensus       204 ~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~  283 (319)
                      ++++|||+|+..+|           ..||||||+|+|+..+......+.. ..+.+.+...+++++++||+||.+|.+|.
T Consensus         3 ~~~~ivDvR~~~e~-----------~~~hi~ga~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~iv~~c~~g~~a~   70 (100)
T smart00450        3 EKVVLLDVRSPEEY-----------EGGHIPGAVNIPLSELLDRRGELDI-LEFEELLKRLGLDKDKPVVVYCRSGNRSA   70 (100)
T ss_pred             CCEEEEECCCHHHh-----------ccCCCCCceeCCHHHhccCCCCcCH-HHHHHHHHHcCCCCCCeEEEEeCCCcHHH
Confidence            46899999999999           6899999999999887655433322 36777777789999999999999999999


Q ss_pred             HHHHHHHhcCCCCceeeeCcHHHHhCCCCCC
Q 020963          284 ILALGLNRLGKHDVAVYDGSWTEWGAQPDTP  314 (319)
Q Consensus       284 ~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p  314 (319)
                      .+++.|+.+|++++++|+||+.+|...+ .|
T Consensus        71 ~~~~~l~~~G~~~v~~l~GG~~~w~~~~-~~  100 (100)
T smart00450       71 KAAWLLRELGFKNVYLLDGGYKEWSAAG-PP  100 (100)
T ss_pred             HHHHHHHHcCCCceEEecCCHHHHHhcC-CC
Confidence            9999999999999999999999999985 44

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily

Probab=99.79  E-value=6.3e-19  Score=136.70  Aligned_cols=102  Identities=22%  Similarity=0.265  Sum_probs=79.4

Q ss_pred             ccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCC
Q 020963           24 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  101 (319)
Q Consensus        24 Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~  101 (319)
                      ||++||.++++++  +++|||||         +..+|..||||||+|+|+..+....... ..++..+.|.+.       
T Consensus         1 is~~~l~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~~-~~~~~~~~~~~~-------   63 (105)
T cd01525           1 ISVYDVIRLLDNSPAKLAAVDIR---------SSPDFRRGHIEGSINIPFSSVFLKEGEL-EQLPTVPRLENY-------   63 (105)
T ss_pred             CCHHHHHHHHhCCCCCeEEEECC---------CHHHHhCCccCCCEeCCHHHhccccccc-ccccchHHHHhh-------
Confidence            7899999999763  68999999         6789999999999999987653221111 123333334322       


Q ss_pred             CCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963          102 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus       102 ~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                      .+++||+||..|.+ +..+++.|+.+||++|++|+||+.+|+
T Consensus        64 ~~~~vv~~c~~g~~-s~~~a~~L~~~G~~~v~~l~GG~~a~~  104 (105)
T cd01525          64 KGKIIVIVSHSHKH-AALFAAFLVKCGVPRVCILDGGINALK  104 (105)
T ss_pred             cCCeEEEEeCCCcc-HHHHHHHHHHcCCCCEEEEeCcHHHhc
Confidence            46889999987765 788899999999999999999999996

Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.

>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain

Probab=99.79  E-value=1.8e-19  Score=139.12  Aligned_cols=102  Identities=21%  Similarity=0.394  Sum_probs=81.5

Q ss_pred             cCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 020963          192 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  271 (319)
Q Consensus       192 is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~  271 (319)
                      ++++++.+.+++++.+|||+|++.+|.          ..||||||+|+|+..+.....    .+   ..+...+++++++
T Consensus         1 is~~el~~~~~~~~~~iiDvR~~~~~~----------~~ghIpga~~ip~~~~~~~~~----~~---~~~~~~~~~~~~~   63 (103)
T cd01447           1 LSPEDARALLGSPGVLLVDVRDPRELE----------RTGMIPGAFHAPRGMLEFWAD----PD---SPYHKPAFAEDKP   63 (103)
T ss_pred             CCHHHHHHHHhCCCeEEEECCCHHHHH----------hcCCCCCcEEcccchhhhhcC----cc---ccccccCCCCCCe
Confidence            467888888876778999999998873          469999999999866531100    00   0111225789999


Q ss_pred             EEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCC
Q 020963          272 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       272 vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      |||||.+|.+|..+++.|+.+|++++++|+||+.+|...
T Consensus        64 ivv~c~~g~~s~~~~~~l~~~G~~~v~~l~Gg~~~w~~~  102 (103)
T cd01447          64 FVFYCASGWRSALAGKTLQDMGLKPVYNIEGGFKDWKEA  102 (103)
T ss_pred             EEEEcCCCCcHHHHHHHHHHcChHHhEeecCcHHHHhhc
Confidence            999999999999999999999999999999999999865

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=99.79  E-value=3.4e-19  Score=135.81  Aligned_cols=93  Identities=26%  Similarity=0.294  Sum_probs=76.0

Q ss_pred             cCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          192 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       192 is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      ||++++.+.+..+  +++|||||++.||           ..||||||+|+|+..+...             .......++
T Consensus         1 is~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghipga~~ip~~~l~~~-------------~~~~~~~~~   56 (95)
T cd01534           1 IGAAELARWAAEGDRTVYRFDVRTPEEY-----------EAGHLPGFRHTPGGQLVQE-------------TDHFAPVRG   56 (95)
T ss_pred             CCHHHHHHHHHcCCCCeEEEECCCHHHH-----------HhCCCCCcEeCCHHHHHHH-------------HHHhcccCC
Confidence            4677888887654  5889999999999           6899999999998665321             111112357


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      ++||+||.+|.||..++..|..+||+ +++++||+.+|..
T Consensus        57 ~~iv~~c~~G~rs~~aa~~L~~~G~~-v~~l~GG~~~W~~   95 (95)
T cd01534          57 ARIVLADDDGVRADMTASWLAQMGWE-VYVLEGGLAAALA   95 (95)
T ss_pred             CeEEEECCCCChHHHHHHHHHHcCCE-EEEecCcHHHhcC
Confidence            89999999999999999999999998 9999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=99.78  E-value=4.5e-19  Score=136.40  Aligned_cols=99  Identities=14%  Similarity=0.233  Sum_probs=80.2

Q ss_pred             cCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          192 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       192 is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      |+++++.+.+.+ .+++|||||++.||           ..||||||+|+|+..+....  +   +...+.+.  .+++++
T Consensus         1 is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghi~ga~~ip~~~~~~~~--~---~~~~~~~~--~~~~~~   62 (100)
T cd01523           1 LDPEDLYARLLAGQPLFILDVRNESDY-----------ERWKIDGENNTPYFDPYFDF--L---EIEEDILD--QLPDDQ   62 (100)
T ss_pred             CCHHHHHHHHHcCCCcEEEEeCCHHHH-----------hhcccCCCcccccccchHHH--H---HhhHHHHh--hCCCCC
Confidence            467888888765 35899999999999           68999999999998764310  0   00122333  567899


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      +||+||.+|.||..++..|+.+||+ ++.+.||+.+|..
T Consensus        63 ~ivv~C~~G~rs~~aa~~L~~~G~~-~~~l~GG~~~W~~  100 (100)
T cd01523          63 EVTVICAKEGSSQFVAELLAERGYD-VDYLAGGMKAWSE  100 (100)
T ss_pred             eEEEEcCCCCcHHHHHHHHHHcCce-eEEeCCcHHhhcC
Confidence            9999999999999999999999998 9999999999963

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily

Probab=99.78  E-value=3.6e-19  Score=138.09  Aligned_cols=99  Identities=26%  Similarity=0.350  Sum_probs=79.8

Q ss_pred             cCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCC---CCCHHHHHHHHHHcCC
Q 020963          192 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT---LLPADELKKRFEQEGI  266 (319)
Q Consensus       192 is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~---~~~~~~l~~~l~~~~~  266 (319)
                      ||++++.+++..+  +++|||||++.+|           ..||||||+|+|+..++.....   +...+.+.+       
T Consensus         1 is~~~l~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~-------   62 (105)
T cd01525           1 ISVYDVIRLLDNSPAKLAAVDIRSSPDF-----------RRGHIEGSINIPFSSVFLKEGELEQLPTVPRLEN-------   62 (105)
T ss_pred             CCHHHHHHHHhCCCCCeEEEECCCHHHH-----------hCCccCCCEeCCHHHhcccccccccccchHHHHh-------
Confidence            5788999988753  6899999999999           6899999999999887543221   222222221       


Q ss_pred             CCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHh
Q 020963          267 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG  308 (319)
Q Consensus       267 ~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~  308 (319)
                      .++++||+||.+|.+|..+++.|..+||++|++++||+.+|+
T Consensus        63 ~~~~~vv~~c~~g~~s~~~a~~L~~~G~~~v~~l~GG~~a~~  104 (105)
T cd01525          63 YKGKIIVIVSHSHKHAALFAAFLVKCGVPRVCILDGGINALK  104 (105)
T ss_pred             hcCCeEEEEeCCCccHHHHHHHHHHcCCCCEEEEeCcHHHhc
Confidence            247899999999999999999999999999999999999996

Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=99.78  E-value=8.1e-19  Score=134.68  Aligned_cols=98  Identities=21%  Similarity=0.334  Sum_probs=83.1

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCC
Q 020963           22 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  101 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~  101 (319)
                      ..|++++|.++++++ .+|||+|         +.++|..||||||+|+|+..+...                   ...++
T Consensus         2 ~~i~~~el~~~~~~~-~~liDvR---------~~~e~~~~hi~ga~~ip~~~~~~~-------------------~~~~~   52 (99)
T cd01527           2 TTISPNDACELLAQG-AVLVDIR---------EPDEYLRERIPGARLVPLSQLESE-------------------GLPLV   52 (99)
T ss_pred             CccCHHHHHHHHHCC-CEEEECC---------CHHHHHhCcCCCCEECChhHhccc-------------------ccCCC
Confidence            468999999998875 8999999         788999999999999998765331                   01256


Q ss_pred             CCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCc
Q 020963          102 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  149 (319)
Q Consensus       102 ~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~  149 (319)
                      ++++||+||..|.+ +..++..|+.+||++|++|.||+.+|+..|+|+
T Consensus        53 ~~~~iv~~c~~g~~-s~~~~~~L~~~g~~~v~~l~gG~~~W~~~~~~~   99 (99)
T cd01527          53 GANAIIFHCRSGMR-TQQNAERLAAISAGEAYVLEGGLDAWKAAGLPV   99 (99)
T ss_pred             CCCcEEEEeCCCch-HHHHHHHHHHcCCccEEEeeCCHHHHHHCcCCC
Confidence            78899999987765 788999999999999999999999999998874

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=99.78  E-value=2.2e-18  Score=159.96  Aligned_cols=171  Identities=19%  Similarity=0.201  Sum_probs=116.3

Q ss_pred             cHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCccccccc---------CC-----CCCCCCCCHHH
Q 020963           25 SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR---------TT-----NLPHMLPSEEA   90 (319)
Q Consensus        25 s~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~---------~~-----~~~~~~~~~~~   90 (319)
                      ...++.+.+.+ +++|||||         .+.+|..||||||+|+|+......         .+     .++..+++.+.
T Consensus         4 ~~~~~~~~~~~-~~~lIDVR---------sp~Ef~~ghIpgAiniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~~~l   73 (345)
T PRK11784          4 DAQDFRALFLN-DTPLIDVR---------SPIEFAEGHIPGAINLPLLNDEERAEVGTCYKQQGQFAAIALGHALVAGNI   73 (345)
T ss_pred             cHHHHHHHHhC-CCEEEECC---------CHHHHhcCCCCCeeeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcchhH
Confidence            45667666544 78999999         789999999999999998532110         00     01122333222


Q ss_pred             HH---HHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHH
Q 020963           91 FA---AAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEA  167 (319)
Q Consensus        91 ~~---~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~  167 (319)
                      ..   +.+...+ +++++||+||..|+.+|..+++.|+.+|| +|.+|+||+.+|.+.+.+.....+             
T Consensus        74 ~~~~~~~~~~~~-~~~~~ivvyC~rgG~RS~~aa~~L~~~G~-~v~~L~GG~~awr~~~~~~~~~~~-------------  138 (345)
T PRK11784         74 AAHREEAWADFP-RANPRGLLYCWRGGLRSGSVQQWLKEAGI-DVPRLEGGYKAYRRFVIDTLEEAP-------------  138 (345)
T ss_pred             HHHHHHHHHhcc-cCCCeEEEEECCCChHHHHHHHHHHHcCC-CcEEEcCCHHHHHHhhHHHHhhhc-------------
Confidence            22   1222211 47889999997655669999999999999 599999999999988875544321             


Q ss_pred             HHHHhcCcccCCcccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCc
Q 020963          168 IEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF  241 (319)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~  241 (319)
                                .+..+ ..+.........+++..+.+.+.++||+|+..+|.|.        ..|+|++  +-|.
T Consensus       139 ----------~~~~~-ivl~G~TGsGKT~iL~~L~~~~~~vlDlE~~aehrGS--------~fG~~~~--~qps  191 (345)
T PRK11784        139 ----------AQFPL-VVLGGNTGSGKTELLQALANAGAQVLDLEGLANHRGS--------SFGRLGG--PQPS  191 (345)
T ss_pred             ----------ccCce-EecCCCCcccHHHHHHHHHhcCCeEEECCchhhhccc--------cccCCCC--CCcc
Confidence                      11122 1234445677788988888778899999999999876        3577766  4444

>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

Probab=99.78  E-value=6.1e-19  Score=134.41  Aligned_cols=92  Identities=22%  Similarity=0.438  Sum_probs=79.8

Q ss_pred             cCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCCc--cccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          192 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRS--GHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       192 is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~~--ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      ++++++.+.++. .+++|||+|++.+|           ..  ||||||+|+|+..+             .+.+.  .+++
T Consensus         2 i~~~~~~~~~~~~~~~~ivDvR~~~e~-----------~~~~~hi~ga~~ip~~~~-------------~~~~~--~~~~   55 (96)
T cd01444           2 ISVDELAELLAAGEAPVLLDVRDPASY-----------AALPDHIPGAIHLDEDSL-------------DDWLG--DLDR   55 (96)
T ss_pred             cCHHHHHHHHhcCCCcEEEECCCHHHH-----------hcccCCCCCCeeCCHHHH-------------HHHHh--hcCC
Confidence            567888887765 46899999999999           56  99999999999654             33444  5788


Q ss_pred             CCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      +++|||||.+|.+|..++..|+.+||.++++++||+.+|..
T Consensus        56 ~~~ivv~c~~g~~s~~a~~~l~~~G~~~v~~l~gG~~~w~~   96 (96)
T cd01444          56 DRPVVVYCYHGNSSAQLAQALREAGFTDVRSLAGGFEAWRR   96 (96)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHcCCceEEEcCCCHHHhcC
Confidence            99999999999999999999999999999999999999963

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=99.78  E-value=6e-19  Score=135.99  Aligned_cols=95  Identities=19%  Similarity=0.328  Sum_probs=79.5

Q ss_pred             cCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcC-CCC
Q 020963          192 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG-ISL  268 (319)
Q Consensus       192 is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~-~~~  268 (319)
                      |+++++.+.+..+  +++|||+|+..||           ..+|||||+|+|+.++..             .+.... .++
T Consensus         2 i~~~~l~~~~~~~~~~~~iiDvR~~~e~-----------~~~hI~ga~~ip~~~~~~-------------~~~~~~~~~~   57 (101)
T cd01528           2 ISVAELAEWLADEREEPVLIDVREPEEL-----------EIAFLPGFLHLPMSEIPE-------------RSKELDSDNP   57 (101)
T ss_pred             CCHHHHHHHHhcCCCCCEEEECCCHHHH-----------hcCcCCCCEecCHHHHHH-------------HHHHhcccCC
Confidence            5788888888764  6899999999999           679999999999866532             222111 256


Q ss_pred             CCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCC
Q 020963          269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      +++||+||++|.||..+++.|..+||.++++|+||+.+|...
T Consensus        58 ~~~vv~~c~~g~rs~~~~~~l~~~G~~~v~~l~GG~~~w~~~   99 (101)
T cd01528          58 DKDIVVLCHHGGRSMQVAQWLLRQGFENVYNLQGGIDAWSLE   99 (101)
T ss_pred             CCeEEEEeCCCchHHHHHHHHHHcCCccEEEecCCHHHHhhh
Confidence            899999999999999999999999999999999999999764

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.78  E-value=8e-19  Score=157.60  Aligned_cols=120  Identities=21%  Similarity=0.366  Sum_probs=103.5

Q ss_pred             CCccccCHHHHHHHhhcC-----CcEEEeccCC--CcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCCHH
Q 020963          187 QPHLIWTLEQVKRNIEEG-----TYQLVDARSK--ARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPAD  255 (319)
Q Consensus       187 ~~~~~is~~~l~~~~~~~-----~~~liDvR~~--~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~~  255 (319)
                      ....+|+++||.+++.++     +..+++++..  .+|           ..||||||++++++...+..    +.|++++
T Consensus         8 ~~~~lVs~~wl~~~l~~~~~~~~d~~~~~~~~~~~~~Y-----------~~~HIPGAv~~d~~~~~~~~~~~~~~lp~~e   76 (285)
T COG2897           8 SSEFLVSPDWLAENLDDPAVVIVDARIILPDPDDAEEY-----------LEGHIPGAVFFDWEADLSDPVPLPHMLPSPE   76 (285)
T ss_pred             CcceEEcHHHHHhhccccccccCceEEEeCCcchHHHH-----------HhccCCCCEecCHHHhhcCCCCCCCCCCCHH
Confidence            345699999999999866     4555555555  566           68999999999999977643    5688999


Q ss_pred             HHHHHHHHcCCCCCCCEEEecC-CcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          256 ELKKRFEQEGISLEKPVVTACG-TGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       256 ~l~~~l~~~~~~~~~~vivyC~-~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +|.++|+++||+.+.+||+|.. .+..|+++||+|+.+|.+||++||||+.+|..++ +|++++
T Consensus        77 ~fa~~~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG~~~W~~~g-~p~~~~  139 (285)
T COG2897          77 QFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGGLPAWKAAG-LPLETE  139 (285)
T ss_pred             HHHHHHHHcCCCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCCHHHHHHcC-CCccCC
Confidence            9999999999999999999996 5678999999999999999999999999999995 999864

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=99.78  E-value=2.1e-18  Score=134.62  Aligned_cols=104  Identities=22%  Similarity=0.309  Sum_probs=87.8

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      ..+.|++++|.+++++++++|||+|         +..+|..||||||+|+|+.                 .|.+.+..  
T Consensus         3 ~~~~is~~el~~~l~~~~~~ivDvR---------~~~e~~~ghi~gA~~ip~~-----------------~l~~~~~~--   54 (108)
T PRK00162          3 QFECINVEQAHQKLQEGGAVLVDIR---------DPQSFAMGHAPGAFHLTND-----------------SLGAFMRQ--   54 (108)
T ss_pred             CccccCHHHHHHHHHcCCCEEEEcC---------CHHHHhcCCCCCCeECCHH-----------------HHHHHHHh--
Confidence            3678999999999977678999999         7889999999999999975                 34444444  


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  152 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~  152 (319)
                      ++++++++|||..|.+ +..++..|+..||++|++|+||+.+|...++|++..
T Consensus        55 ~~~~~~ivv~c~~g~~-s~~a~~~L~~~G~~~v~~l~GG~~~w~~~~~~~~~~  106 (108)
T PRK00162         55 ADFDTPVMVMCYHGNS-SQGAAQYLLQQGFDVVYSIDGGFEAWRRTFPAEVAS  106 (108)
T ss_pred             cCCCCCEEEEeCCCCC-HHHHHHHHHHCCchheEEecCCHHHHHhcCCCccCC
Confidence            4567899999987764 778888999999999999999999999999988754

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.77  E-value=8.3e-18  Score=159.15  Aligned_cols=105  Identities=18%  Similarity=0.220  Sum_probs=88.8

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      .+.|++++|.+++++ +.+|||+|         +..+|..||||||+|+|+..+                 .+.+....+
T Consensus         2 v~~is~~el~~~l~~-~~~ivDvR---------~~~e~~~ghIpgAi~ip~~~l-----------------~~~~~~~~~   54 (376)
T PRK08762          2 IREISPAEARARAAQ-GAVLIDVR---------EAHERASGQAEGALRIPRGFL-----------------ELRIETHLP   54 (376)
T ss_pred             CceeCHHHHHHHHhC-CCEEEECC---------CHHHHhCCcCCCCEECCHHHH-----------------HHHHhhhcC
Confidence            357999999999976 58999999         788999999999999997543                 333444455


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      +++++||+||..|. ++..+++.|+.+||++|++|+||+.+|...|+|++...
T Consensus        55 ~~~~~IvvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  106 (376)
T PRK08762         55 DRDREIVLICASGT-RSAHAAATLRELGYTRVASVAGGFSAWKDAGLPLERPR  106 (376)
T ss_pred             CCCCeEEEEcCCCc-HHHHHHHHHHHcCCCceEeecCcHHHHHhcCCcccccc
Confidence            78899999998766 47889999999999999999999999999999988653

>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily

Probab=99.77  E-value=1.4e-18  Score=131.01  Aligned_cols=89  Identities=22%  Similarity=0.466  Sum_probs=76.5

Q ss_pred             cCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 020963          192 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  271 (319)
Q Consensus       192 is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~  271 (319)
                      ++++++.++++ ++.+|||+|+.++|           ..||||||+|+|+.++             ...+.  .++++++
T Consensus         1 ~~~~e~~~~~~-~~~~iiD~R~~~~~-----------~~~hipgA~~ip~~~~-------------~~~~~--~~~~~~~   53 (90)
T cd01524           1 VQWHELDNYRA-DGVTLIDVRTPQEF-----------EKGHIKGAINIPLDEL-------------RDRLN--ELPKDKE   53 (90)
T ss_pred             CCHHHHHHHhc-CCCEEEECCCHHHH-----------hcCCCCCCEeCCHHHH-------------HHHHH--hcCCCCc
Confidence            35678888874 56889999999999           6899999999998543             33444  4678899


Q ss_pred             EEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHh
Q 020963          272 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG  308 (319)
Q Consensus       272 vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~  308 (319)
                      ||+||.+|.++..++..|+.+|+ ++++++||+.+|+
T Consensus        54 vvl~c~~g~~a~~~a~~L~~~G~-~v~~l~GG~~~w~   89 (90)
T cd01524          54 IIVYCAVGLRGYIAARILTQNGF-KVKNLDGGYKTYS   89 (90)
T ss_pred             EEEEcCCChhHHHHHHHHHHCCC-CEEEecCCHHHhc
Confidence            99999999999999999999999 8999999999996

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.77  E-value=3e-18  Score=133.23  Aligned_cols=116  Identities=18%  Similarity=0.244  Sum_probs=98.2

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           19 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      .....++.++++++++.+++++||||         ..+||..||||.+||||+.....     ...++ ...|.+-+...
T Consensus        20 ~~~~sv~~~qvk~L~~~~~~~llDVR---------epeEfk~gh~~~siNiPy~~~~~-----~~~l~-~~eF~kqvg~~   84 (136)
T KOG1530|consen   20 SNPQSVSVEQVKNLLQHPDVVLLDVR---------EPEEFKQGHIPASINIPYMSRPG-----AGALK-NPEFLKQVGSS   84 (136)
T ss_pred             CCcEEEEHHHHHHHhcCCCEEEEeec---------CHHHhhccCCcceEecccccccc-----ccccC-CHHHHHHhccc
Confidence            45678999999999999889999999         78999999999999999975432     12333 44677777777


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcc
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  150 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~  150 (319)
                      ..+.++.|||+|.+|.+ +..+...|..+||+||.++.|||.+|...++|..
T Consensus        85 kp~~d~eiIf~C~SG~R-s~~A~~~l~s~Gyknv~ny~Gs~~~W~~k~~~~~  135 (136)
T KOG1530|consen   85 KPPHDKEIIFGCASGVR-SLKATKILVSAGYKNVGNYPGSYLAWVDKGGPKK  135 (136)
T ss_pred             CCCCCCcEEEEeccCcc-hhHHHHHHHHcCcccccccCccHHHHHHccCCCC
Confidence            77788899999999876 7888899999999999999999999999988753

>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily

Probab=99.77  E-value=7e-19  Score=137.85  Aligned_cols=99  Identities=26%  Similarity=0.354  Sum_probs=84.0

Q ss_pred             cccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 020963          190 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  267 (319)
Q Consensus       190 ~~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~  267 (319)
                      +.++++++.+.+..+  +++|||+|++.+|           ..||||||+|+|...+..            ..+.  +++
T Consensus         8 ~~~s~~el~~~l~~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~l~~------------~~~~--~i~   62 (110)
T cd01521           8 FETDCWDVAIALKNGKPDFVLVDVRSAEAY-----------ARGHVPGAINLPHREICE------------NATA--KLD   62 (110)
T ss_pred             eecCHHHHHHHHHcCCCCEEEEECCCHHHH-----------hcCCCCCCEeCCHHHhhh------------Hhhh--cCC
Confidence            478899999988753  5899999999999           689999999999866431            1122  678


Q ss_pred             CCCCEEEecCCc--HHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCC
Q 020963          268 LEKPVVTACGTG--VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  315 (319)
Q Consensus       268 ~~~~vivyC~~G--~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~  315 (319)
                      ++++||+||++|  .+|..+++.|+.+|++ +++|+||+.+|...+ +|+
T Consensus        63 ~~~~vvvyc~~g~~~~s~~~a~~l~~~G~~-v~~l~GG~~~W~~~g-~~~  110 (110)
T cd01521          63 KEKLFVVYCDGPGCNGATKAALKLAELGFP-VKEMIGGLDWWKREG-YAT  110 (110)
T ss_pred             CCCeEEEEECCCCCchHHHHHHHHHHcCCe-EEEecCCHHHHHHCC-CCC
Confidence            999999999987  4899999999999995 999999999999995 875

This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=99.76  E-value=4.2e-19  Score=138.83  Aligned_cols=105  Identities=31%  Similarity=0.603  Sum_probs=85.4

Q ss_pred             CHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHc--CCCCCC
Q 020963          193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE--GISLEK  270 (319)
Q Consensus       193 s~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~--~~~~~~  270 (319)
                      |++|+.+.+++++++|||+|++.+|           ..||||||+|+|+..+ ...........+...+...  ++++++
T Consensus         1 s~~el~~~l~~~~~~liD~R~~~~~-----------~~~hI~ga~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (113)
T PF00581_consen    1 SPEELKEMLENESVLLIDVRSPEEY-----------ERGHIPGAVNIPFPSL-DPDEPSLSEDKLDEFLKELGKKIDKDK   68 (113)
T ss_dssp             -HHHHHHHHTTTTEEEEEESSHHHH-----------HHSBETTEEEEEGGGG-SSSSSBCHHHHHHHHHHHHTHGSTTTS
T ss_pred             CHHHHHhhhhCCCeEEEEeCCHHHH-----------HcCCCCCCcccccccc-ccccccccccccccccccccccccccc
Confidence            5788999987778999999999999           6899999999999887 3333445555555555443  568899


Q ss_pred             CEEEecCCcHHHHHHHHH-----HHhcCCCCceeeeCcHHHHhC
Q 020963          271 PVVTACGTGVTACILALG-----LNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~-----L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      +||+||.+|.++..++..     |..+|+++|++|+|||.+|.+
T Consensus        69 ~iv~yc~~~~~~~~~~~~~~~~~l~~~g~~~v~~l~GG~~~w~~  112 (113)
T PF00581_consen   69 DIVFYCSSGWRSGSAAAARVAWILKKLGFKNVYILDGGFEAWKA  112 (113)
T ss_dssp             EEEEEESSSCHHHHHHHHHHHHHHHHTTTSSEEEETTHHHHHHH
T ss_pred             cceeeeecccccchhHHHHHHHHHHHcCCCCEEEecChHHHHhc
Confidence            999999988887777666     888999999999999999975

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=99.76  E-value=3.3e-18  Score=130.36  Aligned_cols=93  Identities=22%  Similarity=0.272  Sum_probs=74.4

Q ss_pred             ccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCC
Q 020963           24 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  101 (319)
Q Consensus        24 Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~  101 (319)
                      ||+++|.++++++  +++|||||         +..+|..||||||+|+|+..+..                 .+..+...
T Consensus         1 is~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghipga~~ip~~~l~~-----------------~~~~~~~~   54 (95)
T cd01534           1 IGAAELARWAAEGDRTVYRFDVR---------TPEEYEAGHLPGFRHTPGGQLVQ-----------------ETDHFAPV   54 (95)
T ss_pred             CCHHHHHHHHHcCCCCeEEEECC---------CHHHHHhCCCCCcEeCCHHHHHH-----------------HHHHhccc
Confidence            6899999999764  58899999         78999999999999999864422                 11111122


Q ss_pred             CCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963          102 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus       102 ~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      ++++||+||..|.+ +..++..|+.+||+ |++|+||+.+|.+
T Consensus        55 ~~~~iv~~c~~G~r-s~~aa~~L~~~G~~-v~~l~GG~~~W~~   95 (95)
T cd01534          55 RGARIVLADDDGVR-ADMTASWLAQMGWE-VYVLEGGLAAALA   95 (95)
T ss_pred             CCCeEEEECCCCCh-HHHHHHHHHHcCCE-EEEecCcHHHhcC
Confidence            46889999998776 67778889999998 9999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=99.76  E-value=1.5e-18  Score=137.41  Aligned_cols=103  Identities=17%  Similarity=0.243  Sum_probs=84.5

Q ss_pred             cCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCC-ccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          192 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIR-SGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       192 is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~-~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      +|++++.+++++ ++.+|||||++.||           . .||||||+|+|+.++....   .+ ..+...+... ++++
T Consensus         1 is~~el~~~l~~~~~~~vIDvR~~~e~-----------~~~ghIpgA~~ip~~~~~~~~---~~-~~~~~~l~~~-~~~~   64 (117)
T cd01522           1 LTPAEAWALLQADPQAVLVDVRTEAEW-----------KFVGGVPDAVHVAWQVYPDME---IN-PNFLAELEEK-VGKD   64 (117)
T ss_pred             CCHHHHHHHHHhCCCeEEEECCCHHHH-----------hcccCCCCceecchhhccccc---cC-HHHHHHHHhh-CCCC
Confidence            467888888876 57999999999999           6 8999999999998875421   11 2333444432 2788


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCC
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      ++||+||.+|.+|..++..|..+||.+++.|.||+.+|.+.
T Consensus        65 ~~ivv~C~~G~rs~~aa~~L~~~G~~~v~~l~gG~~~~~~~  105 (117)
T cd01522          65 RPVLLLCRSGNRSIAAAEAAAQAGFTNVYNVLEGFEGDLDA  105 (117)
T ss_pred             CeEEEEcCCCccHHHHHHHHHHCCCCeEEECcCceecCCCC
Confidence            99999999999999999999999999999999999999765

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily

Probab=99.76  E-value=3.6e-18  Score=133.77  Aligned_cols=101  Identities=22%  Similarity=0.325  Sum_probs=83.9

Q ss_pred             CCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           21 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      ...|++++|.++++++  +++|||+|         +..+|..||||||+|+|+..+..                ..  ..
T Consensus         7 ~~~~s~~el~~~l~~~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~l~~----------------~~--~~   59 (110)
T cd01521           7 AFETDCWDVAIALKNGKPDFVLVDVR---------SAEAYARGHVPGAINLPHREICE----------------NA--TA   59 (110)
T ss_pred             eeecCHHHHHHHHHcCCCCEEEEECC---------CHHHHhcCCCCCCEeCCHHHhhh----------------Hh--hh
Confidence            4679999999999753  58999999         67899999999999999865421                01  12


Q ss_pred             CCCCCCeEEEEcCCCc-chhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCc
Q 020963           99 GLENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  149 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~-~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~  149 (319)
                      +++++++||+||..+. ..+.++++.|+.+||+ +++|+||+.+|...|+|+
T Consensus        60 ~i~~~~~vvvyc~~g~~~~s~~~a~~l~~~G~~-v~~l~GG~~~W~~~g~~~  110 (110)
T cd01521          60 KLDKEKLFVVYCDGPGCNGATKAALKLAELGFP-VKEMIGGLDWWKREGYAT  110 (110)
T ss_pred             cCCCCCeEEEEECCCCCchHHHHHHHHHHcCCe-EEEecCCHHHHHHCCCCC
Confidence            4678899999998763 4588999999999995 999999999999999875

This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.

>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain

Probab=99.75  E-value=4.2e-18  Score=131.41  Aligned_cols=102  Identities=20%  Similarity=0.295  Sum_probs=79.4

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhh-hhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCC
Q 020963           24 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  102 (319)
Q Consensus        24 Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~-~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~  102 (319)
                      |++++|.+++++++.+|||+|         +..+| ..||||||+|+|+..+......           ...+...++++
T Consensus         1 is~~el~~~~~~~~~~iiDvR---------~~~~~~~~ghIpga~~ip~~~~~~~~~~-----------~~~~~~~~~~~   60 (103)
T cd01447           1 LSPEDARALLGSPGVLLVDVR---------DPRELERTGMIPGAFHAPRGMLEFWADP-----------DSPYHKPAFAE   60 (103)
T ss_pred             CCHHHHHHHHhCCCeEEEECC---------CHHHHHhcCCCCCcEEcccchhhhhcCc-----------cccccccCCCC
Confidence            689999999987789999998         56677 5799999999998654211000           00111224678


Q ss_pred             CCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCC
Q 020963          103 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus       103 ~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  146 (319)
                      +++||+||..|.+ +.++++.|+.+||++|++|+||+.+|..+|
T Consensus        61 ~~~ivv~c~~g~~-s~~~~~~l~~~G~~~v~~l~Gg~~~w~~~g  103 (103)
T cd01447          61 DKPFVFYCASGWR-SALAGKTLQDMGLKPVYNIEGGFKDWKEAG  103 (103)
T ss_pred             CCeEEEEcCCCCc-HHHHHHHHHHcChHHhEeecCcHHHHhhcC
Confidence            8999999987654 789999999999999999999999998664

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.

>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily

Probab=99.75  E-value=2.3e-18  Score=131.44  Aligned_cols=87  Identities=30%  Similarity=0.479  Sum_probs=72.9

Q ss_pred             cCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHH
Q 020963          203 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTA  282 (319)
Q Consensus       203 ~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra  282 (319)
                      +++++|||||++.+|           ..||||||+|+|+..+..      ....++. +.  .++++++||+||.+|.+|
T Consensus        10 ~~~~~iiDvR~~~~~-----------~~~hIpgA~~ip~~~~~~------~~~~~~~-~~--~~~~~~~ivv~c~~g~~s   69 (96)
T cd01529          10 EPGTALLDVRAEDEY-----------AAGHLPGKRSIPGAALVL------RSQELQA-LE--APGRATRYVLTCDGSLLA   69 (96)
T ss_pred             CCCeEEEeCCCHHHH-----------cCCCCCCcEeCCHHHhcC------CHHHHHH-hh--cCCCCCCEEEEeCChHHH
Confidence            456899999999999           689999999999876532      2234433 44  357899999999999999


Q ss_pred             HHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          283 CILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       283 ~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      ..+++.|+.+|+++|++|+||+.+|.+
T Consensus        70 ~~~~~~l~~~G~~~v~~l~GG~~~W~~   96 (96)
T cd01529          70 RFAAQELLALGGKPVALLDGGTSAWVA   96 (96)
T ss_pred             HHHHHHHHHcCCCCEEEeCCCHHHhcC
Confidence            999999999999999999999999964

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.

>PLN02160 thiosulfate sulfurtransferase

Probab=99.75  E-value=1.1e-17  Score=135.87  Aligned_cols=115  Identities=17%  Similarity=0.160  Sum_probs=90.2

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCc--eecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA--LFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgA--i~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      ...|+++++.+++++ +.+|||||         +..+|..||||||  +|+|+..+.. .    ..+.+.+..... .. 
T Consensus        14 ~~~i~~~e~~~~~~~-~~~lIDVR---------~~~E~~~ghIpgA~~iniP~~~~~~-~----~~l~~~~~~~~~-~~-   76 (136)
T PLN02160         14 VVSVDVSQAKTLLQS-GHQYLDVR---------TQDEFRRGHCEAAKIVNIPYMLNTP-Q----GRVKNQEFLEQV-SS-   76 (136)
T ss_pred             eeEeCHHHHHHHHhC-CCEEEECC---------CHHHHhcCCCCCcceecccchhcCc-c----cccCCHHHHHHH-Hh-
Confidence            568999999999976 46899999         7899999999999  8999754421 1    112223222222 22 


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      .++++++||+||..|.+ +..++..|+..||++|+.|.||+.+|.+.|+|+.+..
T Consensus        77 ~~~~~~~IivyC~sG~R-S~~Aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  130 (136)
T PLN02160         77 LLNPADDILVGCQSGAR-SLKATTELVAAGYKKVRNKGGGYLAWVDHSFPINQEE  130 (136)
T ss_pred             ccCCCCcEEEECCCcHH-HHHHHHHHHHcCCCCeeecCCcHHHHhhCCCCccccc
Confidence            24678899999998765 8899999999999999999999999999999999864

>smart00450 RHOD Rhodanese Homology Domain

Probab=99.75  E-value=8.1e-18  Score=128.05  Aligned_cols=99  Identities=32%  Similarity=0.617  Sum_probs=81.3

Q ss_pred             CCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEEEcCCCc
Q 020963           35 EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGI  114 (319)
Q Consensus        35 ~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvly~~~g~  114 (319)
                      +++++|||+|         +..+|..||||||+|+|+..+......    . ....+.+.+...++.++++||+||..+.
T Consensus         2 ~~~~~ivDvR---------~~~e~~~~hi~ga~~i~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~iv~~c~~g~   67 (100)
T smart00450        2 DEKVVLLDVR---------SPEEYEGGHIPGAVNIPLSELLDRRGE----L-DILEFEELLKRLGLDKDKPVVVYCRSGN   67 (100)
T ss_pred             CCCEEEEECC---------CHHHhccCCCCCceeCCHHHhccCCCC----c-CHHHHHHHHHHcCCCCCCeEEEEeCCCc
Confidence            3478999999         788999999999999999866442211    1 1226777778888999999999997655


Q ss_pred             chhHHHHHHHHHhcCCceEEecCCHHHHHhCCCC
Q 020963          115 FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  148 (319)
Q Consensus       115 ~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p  148 (319)
                       .+.++++.|+.+|+++|++|+||+.+|...+.|
T Consensus        68 -~a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~~  100 (100)
T smart00450       68 -RSAKAAWLLRELGFKNVYLLDGGYKEWSAAGPP  100 (100)
T ss_pred             -HHHHHHHHHHHcCCCceEEecCCHHHHHhcCCC
Confidence             589999999999999999999999999988764

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily

Probab=99.75  E-value=5e-18  Score=135.50  Aligned_cols=113  Identities=17%  Similarity=0.219  Sum_probs=88.9

Q ss_pred             CCCCCCcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHH-H
Q 020963           17 VSPKEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA-A   94 (319)
Q Consensus        17 ~~~~~~~Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~-~   94 (319)
                      +......|+++++.+++++ .+++|||+|         +..+|..||||||+|+|+..+.....          .+.. .
T Consensus         3 ~~~~~~~is~~el~~~~~~~~~~~ivDvR---------~~~e~~~~hIpgai~ip~~~~~~~~~----------~~~~~~   63 (122)
T cd01526           3 LLSPEERVSVKDYKNILQAGKKHVLLDVR---------PKVHFEICRLPEAINIPLSELLSKAA----------ELKSLQ   63 (122)
T ss_pred             CCCcccccCHHHHHHHHhCCCCeEEEEcC---------CHHHhhcccCCCCeEccHHHHhhhhh----------hhhhhh
Confidence            3345678999999999976 578999999         78999999999999999877643111          1111 2


Q ss_pred             HHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcC-CceEEecCCHHHHHhCCCCc
Q 020963           95 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGH-DRVWVLDGGLPRWRASGYDV  149 (319)
Q Consensus        95 ~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~-~~v~~l~GG~~~W~~~g~p~  149 (319)
                      +...+++++++||+||..|.+ +..++..|+.+|| ++|+.|+||+.+|.....+.
T Consensus        64 ~~~~~~~~~~~ivv~C~~G~r-s~~aa~~L~~~G~~~~v~~l~GG~~~W~~~~~~~  118 (122)
T cd01526          64 ELPLDNDKDSPIYVVCRRGND-SQTAVRKLKELGLERFVRDIIGGLKAWADKVDPT  118 (122)
T ss_pred             hcccccCCCCcEEEECCCCCc-HHHHHHHHHHcCCccceeeecchHHHHHHHhCcc
Confidence            234456889999999988764 8888899999999 69999999999999775443

This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.

>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily

Probab=99.74  E-value=4.6e-18  Score=135.41  Aligned_cols=95  Identities=17%  Similarity=0.304  Sum_probs=78.6

Q ss_pred             ccCHHHHHHHhhc------CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH--
Q 020963          191 IWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE--  262 (319)
Q Consensus       191 ~is~~~l~~~~~~------~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~--  262 (319)
                      .|+++++.+.++.      ++++|||||++.||           ..||||||+|||+.+            .+...+.  
T Consensus         3 ~Is~~el~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghI~gA~~ip~~~------------~l~~~~~~~   59 (121)
T cd01530           3 RISPETLARLLQGKYDNFFDKYIIIDCRFPYEY-----------NGGHIKGAVNLSTKD------------ELEEFFLDK   59 (121)
T ss_pred             ccCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------hCCcCCCCEeCCcHH------------HHHHHHHHh
Confidence            4788899888865      36899999999999           689999999999852            1222222  


Q ss_pred             --HcCCCCCCCEEEecC-CcHHHHHHHHHHHhc------------CCCCceeeeCcHHHHh
Q 020963          263 --QEGISLEKPVVTACG-TGVTACILALGLNRL------------GKHDVAVYDGSWTEWG  308 (319)
Q Consensus       263 --~~~~~~~~~vivyC~-~G~ra~~~~~~L~~~------------G~~~v~~~~Gg~~~W~  308 (319)
                        ..+++++++|||||. +|.||..+++.|+.+            ||.+|++++||+..|-
T Consensus        60 ~~~~~~~~~~~vv~yC~~sg~rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~  120 (121)
T cd01530          60 PGVASKKKRRVLIFHCEFSSKRGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFF  120 (121)
T ss_pred             hcccccCCCCEEEEECCCccccHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhc
Confidence              235789999999997 999999999999874            9999999999999984

They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).

>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4

Probab=99.74  E-value=5.8e-18  Score=138.97  Aligned_cols=87  Identities=26%  Similarity=0.426  Sum_probs=77.4

Q ss_pred             CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHH
Q 020963          205 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACI  284 (319)
Q Consensus       205 ~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~  284 (319)
                      +++|||||++.+|           +.||||||+|+|.             .+|.+.+..  ++++++|||||.+|.+|..
T Consensus        11 ~~~ivDvR~~~e~-----------~~gHIpgAi~~~~-------------~~l~~~l~~--l~~~~~vVv~c~~g~~a~~   64 (145)
T cd01535          11 QTAVVDVTASANY-----------VKRHIPGAWWVLR-------------AQLAQALEK--LPAAERYVLTCGSSLLARF   64 (145)
T ss_pred             CeEEEECCCHHHH-----------HcCCCCCceeCCH-------------HHHHHHHHh--cCCCCCEEEEeCCChHHHH
Confidence            5899999999999           6899999999976             456666774  4578999999999999999


Q ss_pred             HHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          285 LALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       285 ~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +++.|+..|+.+|++++||+.+|...+ +|++++
T Consensus        65 aa~~L~~~G~~~v~~L~GG~~aW~~~g-~pl~~~   97 (145)
T cd01535          65 AAADLAALTVKPVFVLEGGTAAWIAAG-LPVESG   97 (145)
T ss_pred             HHHHHHHcCCcCeEEecCcHHHHHHCC-CCcccC
Confidence            999999999999999999999999995 999864

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=99.74  E-value=8.5e-18  Score=131.39  Aligned_cols=106  Identities=25%  Similarity=0.505  Sum_probs=80.2

Q ss_pred             cHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC--CCCC
Q 020963           25 SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL--GLEN  102 (319)
Q Consensus        25 s~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~i~~  102 (319)
                      ||+||.+++.+++++|||||         +..+|..||||||+|+|+..+..     .......+.+...+...  .+++
T Consensus         1 s~~el~~~l~~~~~~liD~R---------~~~~~~~~hI~ga~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~   66 (113)
T PF00581_consen    1 SPEELKEMLENESVLLIDVR---------SPEEYERGHIPGAVNIPFPSLDP-----DEPSLSEDKLDEFLKELGKKIDK   66 (113)
T ss_dssp             -HHHHHHHHTTTTEEEEEES---------SHHHHHHSBETTEEEEEGGGGSS-----SSSBCHHHHHHHHHHHHTHGSTT
T ss_pred             CHHHHHhhhhCCCeEEEEeC---------CHHHHHcCCCCCCcccccccccc-----ccccccccccccccccccccccc
Confidence            68999999977789999999         88999999999999999976511     12233444555444444  4578


Q ss_pred             CCeEEEEcCCCcchhHH-----HHHHHHHhcCCceEEecCCHHHHHhC
Q 020963          103 KDGLVVYDGKGIFSAAR-----VWWMFRVFGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus       103 ~~~vvly~~~g~~~a~~-----~~~~l~~~G~~~v~~l~GG~~~W~~~  145 (319)
                      ++.||+||..+.. +..     .++.|..+||++|++|+|||.+|.++
T Consensus        67 ~~~iv~yc~~~~~-~~~~~~~~~~~~l~~~g~~~v~~l~GG~~~w~~~  113 (113)
T PF00581_consen   67 DKDIVFYCSSGWR-SGSAAAARVAWILKKLGFKNVYILDGGFEAWKAE  113 (113)
T ss_dssp             TSEEEEEESSSCH-HHHHHHHHHHHHHHHTTTSSEEEETTHHHHHHHH
T ss_pred             cccceeeeecccc-cchhHHHHHHHHHHHcCCCCEEEecChHHHHhcC
Confidence            8899999965543 333     34458999999999999999999863

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily

Probab=99.74  E-value=9.2e-18  Score=133.69  Aligned_cols=99  Identities=17%  Similarity=0.226  Sum_probs=78.2

Q ss_pred             CcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcc-cccccCCCCCCCCCCHHHHHHH
Q 020963           22 PVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD-GVADRTTNLPHMLPSEEAFAAA   94 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~-~l~~~~~~~~~~~~~~~~~~~~   94 (319)
                      ..||++++.++++++      +++|||||         ...+|..||||||+|+|.. .+..             .+...
T Consensus         2 ~~Is~~el~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghI~gA~~ip~~~~l~~-------------~~~~~   59 (121)
T cd01530           2 KRISPETLARLLQGKYDNFFDKYIIIDCR---------FPYEYNGGHIKGAVNLSTKDELEE-------------FFLDK   59 (121)
T ss_pred             CccCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHhCCcCCCCEeCCcHHHHHH-------------HHHHh
Confidence            358999999998753      68999999         6789999999999999975 2211             11111


Q ss_pred             HHhCCCCCCCeEEEEcC-CCcchhHHHHHHHHHh------------cCCceEEecCCHHHHH
Q 020963           95 VSALGLENKDGLVVYDG-KGIFSAARVWWMFRVF------------GHDRVWVLDGGLPRWR  143 (319)
Q Consensus        95 ~~~~~i~~~~~vvly~~-~g~~~a~~~~~~l~~~------------G~~~v~~l~GG~~~W~  143 (319)
                      ...++++++++||+||. +|. ++.++++.|+.+            ||.+|++|+||+.+|.
T Consensus        60 ~~~~~~~~~~~vv~yC~~sg~-rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~  120 (121)
T cd01530          60 PGVASKKKRRVLIFHCEFSSK-RGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFF  120 (121)
T ss_pred             hcccccCCCCEEEEECCCccc-cHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhc
Confidence            12245788999999997 555 588999999985            9999999999999884

They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=99.73  E-value=1.6e-17  Score=127.95  Aligned_cols=94  Identities=22%  Similarity=0.353  Sum_probs=77.2

Q ss_pred             ccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC-
Q 020963           24 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL-  100 (319)
Q Consensus        24 Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i-  100 (319)
                      |++++|.++++.+  +++|||+|         +..+|..+|||||+|+|+..+..                 .+..+.. 
T Consensus         2 i~~~~l~~~~~~~~~~~~iiDvR---------~~~e~~~~hI~ga~~ip~~~~~~-----------------~~~~~~~~   55 (101)
T cd01528           2 ISVAELAEWLADEREEPVLIDVR---------EPEELEIAFLPGFLHLPMSEIPE-----------------RSKELDSD   55 (101)
T ss_pred             CCHHHHHHHHhcCCCCCEEEECC---------CHHHHhcCcCCCCEecCHHHHHH-----------------HHHHhccc
Confidence            7899999999864  58999999         78899999999999999865422                 2222221 


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      +++++||+||..|.+ +.++++.|..+||++|++|+||+.+|..
T Consensus        56 ~~~~~vv~~c~~g~r-s~~~~~~l~~~G~~~v~~l~GG~~~w~~   98 (101)
T cd01528          56 NPDKDIVVLCHHGGR-SMQVAQWLLRQGFENVYNLQGGIDAWSL   98 (101)
T ss_pred             CCCCeEEEEeCCCch-HHHHHHHHHHcCCccEEEecCCHHHHhh
Confidence            468899999988764 7888889999999999999999999975

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=99.73  E-value=1.5e-17  Score=127.90  Aligned_cols=98  Identities=22%  Similarity=0.154  Sum_probs=77.1

Q ss_pred             ccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCC
Q 020963           24 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  102 (319)
Q Consensus        24 Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~  102 (319)
                      |++++|.+++++ .+++|||||         +..+|..||||||+|+|+..+...      .+   +...+.+..  +++
T Consensus         1 is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghi~ga~~ip~~~~~~~------~~---~~~~~~~~~--~~~   60 (100)
T cd01523           1 LDPEDLYARLLAGQPLFILDVR---------NESDYERWKIDGENNTPYFDPYFD------FL---EIEEDILDQ--LPD   60 (100)
T ss_pred             CCHHHHHHHHHcCCCcEEEEeC---------CHHHHhhcccCCCcccccccchHH------HH---HhhHHHHhh--CCC
Confidence            688999999876 368999999         788999999999999998765320      00   000222222  467


Q ss_pred             CCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963          103 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus       103 ~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                      +++||+||..|.+ +..++..|+.+||+ ++.|.||+.+|.
T Consensus        61 ~~~ivv~C~~G~r-s~~aa~~L~~~G~~-~~~l~GG~~~W~   99 (100)
T cd01523          61 DQEVTVICAKEGS-SQFVAELLAERGYD-VDYLAGGMKAWS   99 (100)
T ss_pred             CCeEEEEcCCCCc-HHHHHHHHHHcCce-eEEeCCcHHhhc
Confidence            8899999988765 88899999999998 999999999996

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

Probab=99.71  E-value=4.2e-17  Score=124.19  Aligned_cols=92  Identities=33%  Similarity=0.455  Sum_probs=77.6

Q ss_pred             cccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhhh--cCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           23 VVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQV--AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        23 ~Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~~--ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      .|+++++.+++++ .+++|||+|         +..+|..  ||||||+|+|+..+                 .+.+..  
T Consensus         1 ~i~~~~~~~~~~~~~~~~ivDvR---------~~~e~~~~~~hi~ga~~ip~~~~-----------------~~~~~~--   52 (96)
T cd01444           1 RISVDELAELLAAGEAPVLLDVR---------DPASYAALPDHIPGAIHLDEDSL-----------------DDWLGD--   52 (96)
T ss_pred             CcCHHHHHHHHhcCCCcEEEECC---------CHHHHhcccCCCCCCeeCCHHHH-----------------HHHHhh--
Confidence            3789999999876 469999999         7789999  99999999998643                 223332  


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                      ++++++||+||..|. ++.++++.|+..||++|++|+||+.+|.
T Consensus        53 ~~~~~~ivv~c~~g~-~s~~a~~~l~~~G~~~v~~l~gG~~~w~   95 (96)
T cd01444          53 LDRDRPVVVYCYHGN-SSAQLAQALREAGFTDVRSLAGGFEAWR   95 (96)
T ss_pred             cCCCCCEEEEeCCCC-hHHHHHHHHHHcCCceEEEcCCCHHHhc
Confidence            568899999998665 5899999999999999999999999996

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.

>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily

Probab=99.71  E-value=4.1e-17  Score=124.54  Aligned_cols=94  Identities=26%  Similarity=0.387  Sum_probs=72.3

Q ss_pred             HHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCe
Q 020963           26 VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG  105 (319)
Q Consensus        26 ~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  105 (319)
                      +++|.+.  +++++|||||         +..+|..||||||+|+|+..+..          ..+.++. +..  ++++++
T Consensus         3 ~~~l~~~--~~~~~iiDvR---------~~~~~~~~hIpgA~~ip~~~~~~----------~~~~~~~-~~~--~~~~~~   58 (96)
T cd01529           3 ADWLGEH--EPGTALLDVR---------AEDEYAAGHLPGKRSIPGAALVL----------RSQELQA-LEA--PGRATR   58 (96)
T ss_pred             hHHHhcC--CCCeEEEeCC---------CHHHHcCCCCCCcEeCCHHHhcC----------CHHHHHH-hhc--CCCCCC
Confidence            4555553  3468999999         67899999999999999865422          2334443 332  467889


Q ss_pred             EEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963          106 LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus       106 vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      ||+||..|.+ +..+++.|+.+||++|++|+||+.+|.+
T Consensus        59 ivv~c~~g~~-s~~~~~~l~~~G~~~v~~l~GG~~~W~~   96 (96)
T cd01529          59 YVLTCDGSLL-ARFAAQELLALGGKPVALLDGGTSAWVA   96 (96)
T ss_pred             EEEEeCChHH-HHHHHHHHHHcCCCCEEEeCCCHHHhcC
Confidence            9999987664 7778888999999999999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.

>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily

Probab=99.71  E-value=6.2e-17  Score=122.06  Aligned_cols=89  Identities=22%  Similarity=0.345  Sum_probs=73.8

Q ss_pred             ccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCC
Q 020963           24 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  103 (319)
Q Consensus        24 Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  103 (319)
                      ++++++.++++ ++.+|||+|         +..+|..||||||+|+|+..+                 .+.+..  ++++
T Consensus         1 ~~~~e~~~~~~-~~~~iiD~R---------~~~~~~~~hipgA~~ip~~~~-----------------~~~~~~--~~~~   51 (90)
T cd01524           1 VQWHELDNYRA-DGVTLIDVR---------TPQEFEKGHIKGAINIPLDEL-----------------RDRLNE--LPKD   51 (90)
T ss_pred             CCHHHHHHHhc-CCCEEEECC---------CHHHHhcCCCCCCEeCCHHHH-----------------HHHHHh--cCCC
Confidence            47899999984 477899999         788999999999999997543                 333332  4677


Q ss_pred             CeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963          104 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus       104 ~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                      ++||+||..|. .+..++..|+.+|| +|++|+||+.+|+
T Consensus        52 ~~vvl~c~~g~-~a~~~a~~L~~~G~-~v~~l~GG~~~w~   89 (90)
T cd01524          52 KEIIVYCAVGL-RGYIAARILTQNGF-KVKNLDGGYKTYS   89 (90)
T ss_pred             CcEEEEcCCCh-hHHHHHHHHHHCCC-CEEEecCCHHHhc
Confidence            89999998765 48888889999999 8999999999996

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.70  E-value=4.3e-17  Score=154.29  Aligned_cols=102  Identities=23%  Similarity=0.347  Sum_probs=88.5

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .++++++.+.+++ +.+|||||++.||           ..||||||+|+|+..+             .+.+....+++++
T Consensus         4 ~is~~el~~~l~~-~~~ivDvR~~~e~-----------~~ghIpgAi~ip~~~l-------------~~~~~~~~~~~~~   58 (376)
T PRK08762          4 EISPAEARARAAQ-GAVLIDVREAHER-----------ASGQAEGALRIPRGFL-------------ELRIETHLPDRDR   58 (376)
T ss_pred             eeCHHHHHHHHhC-CCEEEECCCHHHH-----------hCCcCCCCEECCHHHH-------------HHHHhhhcCCCCC
Confidence            5788999988875 4899999999999           6899999999998543             3444444557899


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +||+||++|.||..+++.|+.+||++|++|+||+.+|...+ +|++++
T Consensus        59 ~IvvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~~  105 (376)
T PRK08762         59 EIVLICASGTRSAHAAATLRELGYTRVASVAGGFSAWKDAG-LPLERP  105 (376)
T ss_pred             eEEEEcCCCcHHHHHHHHHHHcCCCceEeecCcHHHHHhcC-Cccccc
Confidence            99999999999999999999999999999999999999995 898764

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=99.70  E-value=5.3e-17  Score=127.74  Aligned_cols=101  Identities=23%  Similarity=0.320  Sum_probs=76.5

Q ss_pred             CcccHHHHHHhcCC--CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           22 PVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        22 ~~Is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      ..|++++|.+++.+  ++++|||||         +. +|..||||||+|+|+..+..             .+.+.....+
T Consensus         2 ~~is~~~l~~~~~~~~~~~~iiDvR---------~~-e~~~~hi~gA~~ip~~~l~~-------------~~~~~~~~~~   58 (113)
T cd01531           2 SYISPAQLKGWIRNGRPPFQVVDVR---------DE-DYAGGHIKGSWHYPSTRFKA-------------QLNQLVQLLS   58 (113)
T ss_pred             CcCCHHHHHHHHHcCCCCEEEEEcC---------Cc-ccCCCcCCCCEecCHHHHhh-------------CHHHHHHHHh
Confidence            57999999999876  458999998         67 99999999999999876533             2333334445


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHH--------hcCCceEEecCCHHHHHhC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRV--------FGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~--------~G~~~v~~l~GG~~~W~~~  145 (319)
                      .+++++||+||..++.++..++..|..        .|+.+|++|+||+.+|.+.
T Consensus        59 ~~~~~~iv~yC~~~~~r~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~~  112 (113)
T cd01531          59 GSKKDTVVFHCALSQVRGPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWESS  112 (113)
T ss_pred             cCCCCeEEEEeecCCcchHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHhh
Confidence            577889999997433335555544433        4999999999999999864

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=99.70  E-value=5.8e-17  Score=128.37  Aligned_cols=104  Identities=14%  Similarity=0.101  Sum_probs=83.1

Q ss_pred             ccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhh-hcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCC
Q 020963           24 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQ-VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  101 (319)
Q Consensus        24 Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~-~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~  101 (319)
                      ||++++.+++++ ++.+|||||         +..+|. .||||||+|+|+..+...       .++ ..|...+.... +
T Consensus         1 is~~el~~~l~~~~~~~vIDvR---------~~~e~~~~ghIpgA~~ip~~~~~~~-------~~~-~~~~~~l~~~~-~   62 (117)
T cd01522           1 LTPAEAWALLQADPQAVLVDVR---------TEAEWKFVGGVPDAVHVAWQVYPDM-------EIN-PNFLAELEEKV-G   62 (117)
T ss_pred             CCHHHHHHHHHhCCCeEEEECC---------CHHHHhcccCCCCceecchhhcccc-------ccC-HHHHHHHHhhC-C
Confidence            689999999987 579999999         788999 999999999998765321       111 23444444433 6


Q ss_pred             CCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCC
Q 020963          102 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus       102 ~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  146 (319)
                      ++++||+||..|. ++..+++.|+.+||++|+.|.||+.+|....
T Consensus        63 ~~~~ivv~C~~G~-rs~~aa~~L~~~G~~~v~~l~gG~~~~~~~~  106 (117)
T cd01522          63 KDRPVLLLCRSGN-RSIAAAEAAAQAGFTNVYNVLEGFEGDLDAA  106 (117)
T ss_pred             CCCeEEEEcCCCc-cHHHHHHHHHHCCCCeEEECcCceecCCCCC
Confidence            7889999998775 4888999999999999999999999997653

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=99.70  E-value=4e-17  Score=125.52  Aligned_cols=81  Identities=16%  Similarity=0.263  Sum_probs=70.0

Q ss_pred             CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHH
Q 020963          204 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC  283 (319)
Q Consensus       204 ~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~  283 (319)
                      ....+||+|++++|           ..||||||+|+|+.+             +...+.....+++++||+||.+|.+|.
T Consensus        17 ~~~~lIDvR~~~ef-----------~~ghIpgAinip~~~-------------l~~~l~~~~~~~~~~vvlyC~~G~rS~   72 (101)
T TIGR02981        17 AAEHWIDVRIPEQY-----------QQEHIQGAINIPLKE-------------IKEHIATAVPDKNDTVKLYCNAGRQSG   72 (101)
T ss_pred             cCCEEEECCCHHHH-----------hcCCCCCCEECCHHH-------------HHHHHHHhCCCCCCeEEEEeCCCHHHH
Confidence            35779999999999           689999999999854             444555555677889999999999999


Q ss_pred             HHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          284 ILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       284 ~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      .++..|+.+||.++.++ ||+.+|.-
T Consensus        73 ~aa~~L~~~G~~~v~~~-GG~~~~~~   97 (101)
T TIGR02981        73 MAKDILLDMGYTHAENA-GGIKDIAM   97 (101)
T ss_pred             HHHHHHHHcCCCeEEec-CCHHHhhh
Confidence            99999999999999986 99999974

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4

Probab=99.69  E-value=1e-16  Score=131.56  Aligned_cols=96  Identities=30%  Similarity=0.385  Sum_probs=79.1

Q ss_pred             HHHhcCCC-CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEE
Q 020963           29 LHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLV  107 (319)
Q Consensus        29 l~~~l~~~-~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vv  107 (319)
                      |.+++.++ +++|||+|         +..+|..||||||+|+|..                 +|.+.+..++  ++++||
T Consensus         2 l~~~l~~~~~~~ivDvR---------~~~e~~~gHIpgAi~~~~~-----------------~l~~~l~~l~--~~~~vV   53 (145)
T cd01535           2 LAAWLGEGGQTAVVDVT---------ASANYVKRHIPGAWWVLRA-----------------QLAQALEKLP--AAERYV   53 (145)
T ss_pred             hHHHHhCCCCeEEEECC---------CHHHHHcCCCCCceeCCHH-----------------HHHHHHHhcC--CCCCEE
Confidence            45555443 58999999         7789999999999999754                 4555666653  568899


Q ss_pred             EEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963          108 VYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus       108 ly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      |||.++. .+..+++.|+..|+++|++|+||+.+|.+.|+|+++..
T Consensus        54 v~c~~g~-~a~~aa~~L~~~G~~~v~~L~GG~~aW~~~g~pl~~~~   98 (145)
T cd01535          54 LTCGSSL-LARFAAADLAALTVKPVFVLEGGTAAWIAAGLPVESGE   98 (145)
T ss_pred             EEeCCCh-HHHHHHHHHHHcCCcCeEEecCcHHHHHHCCCCcccCC
Confidence            9998764 58889999999999999999999999999999998764

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=99.69  E-value=6.2e-17  Score=127.36  Aligned_cols=99  Identities=25%  Similarity=0.371  Sum_probs=78.4

Q ss_pred             ccCHHHHHHHhhc--CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          191 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       191 ~is~~~l~~~~~~--~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      .|+++++.+.+..  ++++|||||+. ||           ..||||||+|+|+..+..         .+.++....++++
T Consensus         3 ~is~~~l~~~~~~~~~~~~iiDvR~~-e~-----------~~~hi~gA~~ip~~~l~~---------~~~~~~~~~~~~~   61 (113)
T cd01531           3 YISPAQLKGWIRNGRPPFQVVDVRDE-DY-----------AGGHIKGSWHYPSTRFKA---------QLNQLVQLLSGSK   61 (113)
T ss_pred             cCCHHHHHHHHHcCCCCEEEEEcCCc-cc-----------CCCcCCCCEecCHHHHhh---------CHHHHHHHHhcCC
Confidence            5788999998866  45789999999 99           689999999999987542         2333333345678


Q ss_pred             CCCEEEecC-CcHHHHHHHHHHHh--------cCCCCceeeeCcHHHHhCC
Q 020963          269 EKPVVTACG-TGVTACILALGLNR--------LGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       269 ~~~vivyC~-~G~ra~~~~~~L~~--------~G~~~v~~~~Gg~~~W~~~  310 (319)
                      +++||+||. +|.|+..++..|..        .|+.+|++++||+.+|...
T Consensus        62 ~~~iv~yC~~~~~r~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~~  112 (113)
T cd01531          62 KDTVVFHCALSQVRGPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWESS  112 (113)
T ss_pred             CCeEEEEeecCCcchHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHhh
Confidence            899999998 77888877766533        4999999999999999864

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

Probab=99.69  E-value=4.7e-17  Score=121.59  Aligned_cols=86  Identities=23%  Similarity=0.471  Sum_probs=73.9

Q ss_pred             HHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCC
Q 020963          199 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGT  278 (319)
Q Consensus       199 ~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~  278 (319)
                      +.+..++..|||+|++.+|           ..||||||+|+|+..+...             ....+++++++||+||..
T Consensus         4 ~~~~~~~~~iiD~R~~~~~-----------~~~~i~ga~~~~~~~~~~~-------------~~~~~~~~~~~vv~~c~~   59 (89)
T cd00158           4 ELLDDEDAVLLDVREPEEY-----------AAGHIPGAINIPLSELEER-------------AALLELDKDKPIVVYCRS   59 (89)
T ss_pred             HHhcCCCeEEEECCCHHHH-----------hccccCCCEecchHHHhhH-------------HHhhccCCCCeEEEEeCC
Confidence            3444567999999999999           6799999999999775432             123377899999999999


Q ss_pred             cHHHHHHHHHHHhcCCCCceeeeCcHHHHh
Q 020963          279 GVTACILALGLNRLGKHDVAVYDGSWTEWG  308 (319)
Q Consensus       279 G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~  308 (319)
                      |.+|..++..|+.+|+.++++|+||+.+|.
T Consensus        60 ~~~a~~~~~~l~~~G~~~v~~l~gG~~~w~   89 (89)
T cd00158          60 GNRSARAAKLLRKAGGTNVYNLEGGMLAWK   89 (89)
T ss_pred             CchHHHHHHHHHHhCcccEEEecCChhhcC
Confidence            999999999999999999999999999995

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.

>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1

Probab=99.68  E-value=9.4e-17  Score=121.62  Aligned_cols=84  Identities=25%  Similarity=0.367  Sum_probs=68.9

Q ss_pred             hhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC-CCCCCEEEecCCc
Q 020963          201 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI-SLEKPVVTACGTG  279 (319)
Q Consensus       201 ~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~-~~~~~vivyC~~G  279 (319)
                      +++++++|||+|++.+|           ..||||||+|+|...+...            ...  .+ +++++||+||.+|
T Consensus         6 ~~~~~~~liDvR~~~e~-----------~~~hi~ga~~ip~~~~~~~------------~~~--~~~~~~~~ivl~c~~G   60 (92)
T cd01532           6 LAREEIALIDVREEDPF-----------AQSHPLWAANLPLSRLELD------------AWV--RIPRRDTPIVVYGEGG   60 (92)
T ss_pred             hcCCCeEEEECCCHHHH-----------hhCCcccCeeCCHHHHHhh------------hHh--hCCCCCCeEEEEeCCC
Confidence            44567999999999999           6899999999998664311            111  23 3588999999998


Q ss_pred             HH--HHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          280 VT--ACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       280 ~r--a~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      .+  |..+++.|+.+||++|++++||+.+|..
T Consensus        61 ~~~~s~~aa~~L~~~G~~~v~~l~GG~~~W~~   92 (92)
T cd01532          61 GEDLAPRAARRLSELGYTDVALLEGGLQGWRA   92 (92)
T ss_pred             CchHHHHHHHHHHHcCccCEEEccCCHHHHcC
Confidence            76  6789999999999999999999999974

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=99.68  E-value=8.5e-17  Score=124.27  Aligned_cols=81  Identities=19%  Similarity=0.298  Sum_probs=70.4

Q ss_pred             CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHH
Q 020963          204 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC  283 (319)
Q Consensus       204 ~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~  283 (319)
                      ..-.|||+|+++||           +.||||||+|+|+.+             +.+.+...+.+++++||+||.+|.+|.
T Consensus        19 ~~~~lIDvR~~~ef-----------~~ghIpGAiniP~~~-------------l~~~l~~l~~~~~~~IVlyC~~G~rS~   74 (104)
T PRK10287         19 AAEHWIDVRVPEQY-----------QQEHVQGAINIPLKE-------------VKERIATAVPDKNDTVKLYCNAGRQSG   74 (104)
T ss_pred             CCCEEEECCCHHHH-----------hcCCCCccEECCHHH-------------HHHHHHhcCCCCCCeEEEEeCCChHHH
Confidence            45669999999999           689999999999854             445566666778899999999999999


Q ss_pred             HHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          284 ILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       284 ~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      .++..|..+||+++.+ .||+.+|.-
T Consensus        75 ~aa~~L~~~G~~~v~~-~GG~~~~~~   99 (104)
T PRK10287         75 QAKEILSEMGYTHAEN-AGGLKDIAM   99 (104)
T ss_pred             HHHHHHHHcCCCeEEe-cCCHHHHhh
Confidence            9999999999999987 699999964

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.67  E-value=1.4e-16  Score=124.21  Aligned_cols=97  Identities=25%  Similarity=0.460  Sum_probs=81.9

Q ss_pred             HHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCC-CcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEe
Q 020963          197 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPG-SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTA  275 (319)
Q Consensus       197 l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpg-A~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivy  275 (319)
                      .......++.+|||||++.||           ..+|||+ ++|+|..++.......             .+++++++|||
T Consensus        12 ~~~~~~~~~~~liDvR~~~e~-----------~~~~i~~~~~~ip~~~~~~~~~~~-------------~~~~~~~ivv~   67 (110)
T COG0607          12 AALLLAGEDAVLLDVREPEEY-----------ERGHIPGAAINIPLSELKAAENLL-------------ELPDDDPIVVY   67 (110)
T ss_pred             HHHhhccCCCEEEeccChhHh-----------hhcCCCcceeeeecccchhhhccc-------------ccCCCCeEEEE
Confidence            334444567999999999999           6899999 9999999876543210             15789999999


Q ss_pred             cCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          276 CGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       276 C~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      |.+|.||..++..|+.+||.+++.++||+.+|...+ +|++.+
T Consensus        68 C~~G~rS~~aa~~L~~~G~~~~~~l~gG~~~w~~~~-~~~~~~  109 (110)
T COG0607          68 CASGVRSAAAAAALKLAGFTNVYNLDGGIDAWKGAG-LPLVRG  109 (110)
T ss_pred             eCCCCChHHHHHHHHHcCCccccccCCcHHHHHhcC-CCcccC
Confidence            999999999999999999998889999999999995 888764

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=99.67  E-value=2e-16  Score=124.47  Aligned_cols=99  Identities=21%  Similarity=0.348  Sum_probs=72.4

Q ss_pred             CcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 020963           22 PVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV   95 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~   95 (319)
                      +.|++++|.++++++      +++|||||         +. +|..||||||+|+|+..+..             .+.+.+
T Consensus         2 ~~is~~el~~~l~~~~~~~~~~~~iiDvR---------~~-ef~~ghipgAi~ip~~~~~~-------------~~~~~~   58 (113)
T cd01443           2 KYISPEELVALLENSDSNAGKDFVVVDLR---------RD-DYEGGHIKGSINLPAQSCYQ-------------TLPQVY   58 (113)
T ss_pred             cccCHHHHHHHHhCCccccCCcEEEEECC---------ch-hcCCCcccCceecchhHHHH-------------HHHHHH
Confidence            468999999999874      58999998         66 99999999999999876532             222333


Q ss_pred             HhCCCCCCCeEEEEcCCCcchhHHHHHHHH----HhcC--CceEEecCCHHHHH
Q 020963           96 SALGLENKDGLVVYDGKGIFSAARVWWMFR----VFGH--DRVWVLDGGLPRWR  143 (319)
Q Consensus        96 ~~~~i~~~~~vvly~~~g~~~a~~~~~~l~----~~G~--~~v~~l~GG~~~W~  143 (319)
                      ..+...+..+||+||..++.++.+++..|.    ..|+  .++++|+||+.+|.
T Consensus        59 ~~~~~~~~~~iv~~C~~~g~rs~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~  112 (113)
T cd01443          59 ALFSLAGVKLAIFYCGSSQGRGPRAARWFADYLRKVGESLPKSYILTGGIKAWY  112 (113)
T ss_pred             HHhhhcCCCEEEEECCCCCcccHHHHHHHHHHHhccCCCCCeEEEECChhhhhc
Confidence            333334567899999865434556553333    3475  68999999999995

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1

Probab=99.67  E-value=3.4e-16  Score=118.53  Aligned_cols=87  Identities=23%  Similarity=0.290  Sum_probs=68.5

Q ss_pred             hcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEEEcC
Q 020963           32 NLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG  111 (319)
Q Consensus        32 ~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvly~~  111 (319)
                      ++++++++|||+|         +..+|..+|||||+|+|+..+...                ....+ .+++++|||||.
T Consensus         5 ~~~~~~~~liDvR---------~~~e~~~~hi~ga~~ip~~~~~~~----------------~~~~~-~~~~~~ivl~c~   58 (92)
T cd01532           5 LLAREEIALIDVR---------EEDPFAQSHPLWAANLPLSRLELD----------------AWVRI-PRRDTPIVVYGE   58 (92)
T ss_pred             hhcCCCeEEEECC---------CHHHHhhCCcccCeeCCHHHHHhh----------------hHhhC-CCCCCeEEEEeC
Confidence            4455679999999         789999999999999998654210                11111 235789999998


Q ss_pred             CCcch-hHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963          112 KGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus       112 ~g~~~-a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      +|.+. +.++++.|+..||++|++|+||+.+|.+
T Consensus        59 ~G~~~~s~~aa~~L~~~G~~~v~~l~GG~~~W~~   92 (92)
T cd01532          59 GGGEDLAPRAARRLSELGYTDVALLEGGLQGWRA   92 (92)
T ss_pred             CCCchHHHHHHHHHHHcCccCEEEccCCHHHHcC
Confidence            87543 6789999999999999999999999974

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.

>PRK01415 hypothetical protein; Validated

Probab=99.66  E-value=2e-16  Score=139.62  Aligned_cols=102  Identities=11%  Similarity=0.111  Sum_probs=87.2

Q ss_pred             CccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH-HcCC
Q 020963          188 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE-QEGI  266 (319)
Q Consensus       188 ~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~-~~~~  266 (319)
                      ....|+++++.+.+++++++|||||++.||           ..||||||+|+|...+..          +.+++. ...+
T Consensus       110 ~g~~i~p~e~~~ll~~~~~vvIDVRn~~E~-----------~~Ghi~gAinip~~~f~e----------~~~~~~~~~~~  168 (247)
T PRK01415        110 KGEYIEPKDWDEFITKQDVIVIDTRNDYEV-----------EVGTFKSAINPNTKTFKQ----------FPAWVQQNQEL  168 (247)
T ss_pred             CccccCHHHHHHHHhCCCcEEEECCCHHHH-----------hcCCcCCCCCCChHHHhh----------hHHHHhhhhhh
Confidence            345799999999998888999999999999           689999999999876532          222221 1256


Q ss_pred             CCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCC
Q 020963          267 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       267 ~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      +++++|++||.+|.||..++..|+..||++|+.|.||+..|...
T Consensus       169 ~k~k~Iv~yCtgGiRs~kAa~~L~~~Gf~~Vy~L~GGi~~w~~~  212 (247)
T PRK01415        169 LKGKKIAMVCTGGIRCEKSTSLLKSIGYDEVYHLKGGILQYLED  212 (247)
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHcCCCcEEEechHHHHHHHh
Confidence            78999999999999999999999999999999999999999976

>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

Probab=99.65  E-value=5.3e-16  Score=115.87  Aligned_cols=88  Identities=31%  Similarity=0.539  Sum_probs=72.7

Q ss_pred             HHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEE
Q 020963           29 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVV  108 (319)
Q Consensus        29 l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvl  108 (319)
                      +.+++++++.+|||+|         +..+|..+|||||+|+|+..+..                 .....+++++++|||
T Consensus         2 ~~~~~~~~~~~iiD~R---------~~~~~~~~~i~ga~~~~~~~~~~-----------------~~~~~~~~~~~~vv~   55 (89)
T cd00158           2 LKELLDDEDAVLLDVR---------EPEEYAAGHIPGAINIPLSELEE-----------------RAALLELDKDKPIVV   55 (89)
T ss_pred             hHHHhcCCCeEEEECC---------CHHHHhccccCCCEecchHHHhh-----------------HHHhhccCCCCeEEE
Confidence            4555666689999999         77899999999999999875422                 113446788999999


Q ss_pred             EcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963          109 YDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus       109 y~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                      ||..+. .+..+++.|+.+||.+|++|+||+.+|.
T Consensus        56 ~c~~~~-~a~~~~~~l~~~G~~~v~~l~gG~~~w~   89 (89)
T cd00158          56 YCRSGN-RSARAAKLLRKAGGTNVYNLEGGMLAWK   89 (89)
T ss_pred             EeCCCc-hHHHHHHHHHHhCcccEEEecCChhhcC
Confidence            998764 5899999999999999999999999994

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=99.64  E-value=5.4e-16  Score=121.98  Aligned_cols=98  Identities=18%  Similarity=0.311  Sum_probs=73.2

Q ss_pred             ccCHHHHHHHhhcC------CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHc
Q 020963          191 IWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE  264 (319)
Q Consensus       191 ~is~~~l~~~~~~~------~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~  264 (319)
                      .++++++.+.+..+      +++|||||++ ||           ..||||||+|+|+..+..         .+.+.+...
T Consensus         3 ~is~~el~~~l~~~~~~~~~~~~iiDvR~~-ef-----------~~ghipgAi~ip~~~~~~---------~~~~~~~~~   61 (113)
T cd01443           3 YISPEELVALLENSDSNAGKDFVVVDLRRD-DY-----------EGGHIKGSINLPAQSCYQ---------TLPQVYALF   61 (113)
T ss_pred             ccCHHHHHHHHhCCccccCCcEEEEECCch-hc-----------CCCcccCceecchhHHHH---------HHHHHHHHh
Confidence            57889999988764      5889999999 99           579999999999977532         222333322


Q ss_pred             CCCCCCCEEEecCC-cHHHHHHHHHH----HhcCC--CCceeeeCcHHHHhC
Q 020963          265 GISLEKPVVTACGT-GVTACILALGL----NRLGK--HDVAVYDGSWTEWGA  309 (319)
Q Consensus       265 ~~~~~~~vivyC~~-G~ra~~~~~~L----~~~G~--~~v~~~~Gg~~~W~~  309 (319)
                      ...+.++||+||.+ |.||..++..|    +..|+  .++++++||+.+|.+
T Consensus        62 ~~~~~~~iv~~C~~~g~rs~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~~  113 (113)
T cd01443          62 SLAGVKLAIFYCGSSQGRGPRAARWFADYLRKVGESLPKSYILTGGIKAWYH  113 (113)
T ss_pred             hhcCCCEEEEECCCCCcccHHHHHHHHHHHhccCCCCCeEEEECChhhhhcC
Confidence            33456799999996 67877766443    34575  689999999999963

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=99.62  E-value=1.7e-15  Score=139.33  Aligned_cols=103  Identities=20%  Similarity=0.316  Sum_probs=85.1

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHH-Hh
Q 020963           19 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV-SA   97 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~-~~   97 (319)
                      .....|+++++.+++++++++|||||         +..+|..||||||+|+|+..+..              |...+ ..
T Consensus       109 ~~~~~is~~el~~~l~~~~~vlIDVR---------~~~E~~~GhI~GAi~ip~~~~~~--------------~~~~l~~~  165 (314)
T PRK00142        109 NVGTYLKPKEVNELLDDPDVVFIDMR---------NDYEYEIGHFENAIEPDIETFRE--------------FPPWVEEN  165 (314)
T ss_pred             cCCcccCHHHHHHHhcCCCeEEEECC---------CHHHHhcCcCCCCEeCCHHHhhh--------------hHHHHHHh
Confidence            44578999999999988889999999         67899999999999999876533              11112 23


Q ss_pred             CCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhC
Q 020963           98 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus        98 ~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~  145 (319)
                      +++.++++||+||.+|.+ +..++..|+..||++|+.|+||+.+|...
T Consensus       166 ~~~~kdk~IvvyC~~G~R-s~~aa~~L~~~Gf~~V~~L~GGi~~w~~~  212 (314)
T PRK00142        166 LDPLKDKKVVMYCTGGIR-CEKASAWMKHEGFKEVYQLEGGIITYGED  212 (314)
T ss_pred             cCCCCcCeEEEECCCCcH-HHHHHHHHHHcCCCcEEEecchHHHHHHh
Confidence            456688999999988775 77788889999999999999999999864

>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase

Probab=99.61  E-value=1.3e-15  Score=123.12  Aligned_cols=109  Identities=27%  Similarity=0.393  Sum_probs=78.7

Q ss_pred             cccHHHHHHhcCC--CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccC---CC--CCCCCCCHHHHHHHH
Q 020963           23 VVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT---TN--LPHMLPSEEAFAAAV   95 (319)
Q Consensus        23 ~Is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~---~~--~~~~~~~~~~~~~~~   95 (319)
                      +|++++|.++++.  .+++|||||         +..+|..||||||+|+|+..+....   ..  ...++++.+.+.++ 
T Consensus         1 ~is~~~l~~~l~~~~~~~~iiDvR---------~~~~~~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-   70 (132)
T cd01446           1 TIDCAWLAALLREGGERLLLLDCR---------PFLEYSSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSCPEDRDRL-   70 (132)
T ss_pred             CcCHHHHHHHHhcCCCCEEEEECC---------CHHHHhhCcccCcEecChHHHHHHhhcccchhhhhhcCCHHHHHHH-
Confidence            5899999999975  479999999         7889999999999999987533211   00  11134455544443 


Q ss_pred             HhCCCCCCCeEEEEcCCCc-----chhHHHHHHHHHhcC-----CceEEecCCHHHHHh
Q 020963           96 SALGLENKDGLVVYDGKGI-----FSAARVWWMFRVFGH-----DRVWVLDGGLPRWRA  144 (319)
Q Consensus        96 ~~~~i~~~~~vvly~~~g~-----~~a~~~~~~l~~~G~-----~~v~~l~GG~~~W~~  144 (319)
                      ...   ++++|||||..+.     ..+++++++++.++.     .+|++|+||+.+|++
T Consensus        71 ~~~---~~~~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~  126 (132)
T cd01446          71 RRG---ESLAVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSS  126 (132)
T ss_pred             hcC---CCCeEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHh
Confidence            222   6789999997664     235566666666665     689999999999975

This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.

>PRK01415 hypothetical protein; Validated

Probab=99.60  E-value=2.3e-15  Score=132.92  Aligned_cols=103  Identities=18%  Similarity=0.219  Sum_probs=84.8

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHH-hC
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS-AL   98 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~-~~   98 (319)
                      ....|+|+++.+++++++++|||||         ...||..||||||+|+|...+..              |.+.+. ..
T Consensus       110 ~g~~i~p~e~~~ll~~~~~vvIDVR---------n~~E~~~Ghi~gAinip~~~f~e--------------~~~~~~~~~  166 (247)
T PRK01415        110 KGEYIEPKDWDEFITKQDVIVIDTR---------NDYEVEVGTFKSAINPNTKTFKQ--------------FPAWVQQNQ  166 (247)
T ss_pred             CccccCHHHHHHHHhCCCcEEEECC---------CHHHHhcCCcCCCCCCChHHHhh--------------hHHHHhhhh
Confidence            4678999999999998889999999         68899999999999999875532              111111 12


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCC
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  146 (319)
                      .+.++++|++||.+|.+ +..++..|+..||++|+.|.||+.+|.+..
T Consensus       167 ~~~k~k~Iv~yCtgGiR-s~kAa~~L~~~Gf~~Vy~L~GGi~~w~~~~  213 (247)
T PRK01415        167 ELLKGKKIAMVCTGGIR-CEKSTSLLKSIGYDEVYHLKGGILQYLEDT  213 (247)
T ss_pred             hhcCCCeEEEECCCChH-HHHHHHHHHHcCCCcEEEechHHHHHHHhc
Confidence            35688999999987765 888899999999999999999999998754

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=99.60  E-value=1.3e-15  Score=144.64  Aligned_cols=100  Identities=23%  Similarity=0.440  Sum_probs=86.1

Q ss_pred             CccccCHHHHHHHhhcC-CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 020963          188 PHLIWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  266 (319)
Q Consensus       188 ~~~~is~~~l~~~~~~~-~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~  266 (319)
                      ....++++++.+.++.+ +++|||+|+++||           ..||||||+|+|+..+...       .    .+.  .+
T Consensus       285 ~~~~Is~~el~~~l~~~~~~~lIDvR~~~ef-----------~~ghIpGAinip~~~l~~~-------~----~~~--~l  340 (392)
T PRK07878        285 AGSTITPRELKEWLDSGKKIALIDVREPVEW-----------DIVHIPGAQLIPKSEILSG-------E----ALA--KL  340 (392)
T ss_pred             CCCccCHHHHHHHHhCCCCeEEEECCCHHHH-----------hcCCCCCCEEcChHHhcch-------h----HHh--hC
Confidence            34579999999988754 5789999999999           6899999999999876431       1    122  56


Q ss_pred             CCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          267 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       267 ~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                      +++++||+||++|.||..++..|+..||++|++|+||+.+|....
T Consensus       341 ~~d~~iVvyC~~G~rS~~aa~~L~~~G~~~V~~L~GG~~~W~~~~  385 (392)
T PRK07878        341 PQDRTIVLYCKTGVRSAEALAALKKAGFSDAVHLQGGVVAWAKQV  385 (392)
T ss_pred             CCCCcEEEEcCCChHHHHHHHHHHHcCCCcEEEecCcHHHHHHhc
Confidence            889999999999999999999999999999999999999999874

>PRK05320 rhodanese superfamily protein; Provisional

Probab=99.60  E-value=2.3e-15  Score=134.69  Aligned_cols=101  Identities=17%  Similarity=0.272  Sum_probs=82.1

Q ss_pred             cccCHHHHHHHhhcC------CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  263 (319)
Q Consensus       190 ~~is~~~l~~~~~~~------~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~  263 (319)
                      ..++++++.+.++.+      +++|||||++.||           ..||||||+|+|...+...      ++.+.+.+. 
T Consensus       110 ~~is~~el~~~l~~~~~~~~~~~vlIDVR~~~E~-----------~~Ghi~GAiniPl~~f~~~------~~~l~~~~~-  171 (257)
T PRK05320        110 PSVDAATLKRWLDQGHDDAGRPVVMLDTRNAFEV-----------DVGTFDGALDYRIDKFTEF------PEALAAHRA-  171 (257)
T ss_pred             ceeCHHHHHHHHhccccccCCCeEEEECCCHHHH-----------ccCccCCCEeCChhHhhhh------HHHHHhhhh-
Confidence            478898888877642      4799999999999           6899999999999776321      112222222 


Q ss_pred             cCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCC
Q 020963          264 EGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       264 ~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                       .+ ++++|++||.+|.||..++..|+..||++|+.+.||+..|...
T Consensus       172 -~~-kdk~IvvyC~~G~Rs~~Aa~~L~~~Gf~~V~~L~GGi~~w~~~  216 (257)
T PRK05320        172 -DL-AGKTVVSFCTGGIRCEKAAIHMQEVGIDNVYQLEGGILKYFEE  216 (257)
T ss_pred             -hc-CCCeEEEECCCCHHHHHHHHHHHHcCCcceEEeccCHHHHHHh
Confidence             22 7899999999999999999999999999999999999999875

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=99.59  E-value=6.1e-15  Score=113.41  Aligned_cols=80  Identities=16%  Similarity=0.197  Sum_probs=66.8

Q ss_pred             CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEEEcCCCcch
Q 020963           37 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFS  116 (319)
Q Consensus        37 ~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvly~~~g~~~  116 (319)
                      ...+||+|         +.++|..||||||+|+|+..                 +...+..+..+++++||+||.+|. +
T Consensus        18 ~~~lIDvR---------~~~ef~~ghIpgAinip~~~-----------------l~~~l~~~~~~~~~~vvlyC~~G~-r   70 (101)
T TIGR02981        18 AEHWIDVR---------IPEQYQQEHIQGAINIPLKE-----------------IKEHIATAVPDKNDTVKLYCNAGR-Q   70 (101)
T ss_pred             CCEEEECC---------CHHHHhcCCCCCCEECCHHH-----------------HHHHHHHhCCCCCCeEEEEeCCCH-H
Confidence            56899999         78999999999999999864                 333455555677889999998876 4


Q ss_pred             hHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963          117 AARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus       117 a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      +..++..|+.+||++|.++ ||+.+|.-
T Consensus        71 S~~aa~~L~~~G~~~v~~~-GG~~~~~~   97 (101)
T TIGR02981        71 SGMAKDILLDMGYTHAENA-GGIKDIAM   97 (101)
T ss_pred             HHHHHHHHHHcCCCeEEec-CCHHHhhh
Confidence            8889999999999999986 99999963

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=99.58  E-value=8.1e-15  Score=113.22  Aligned_cols=80  Identities=16%  Similarity=0.236  Sum_probs=67.6

Q ss_pred             CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEEEcCCCcch
Q 020963           37 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFS  116 (319)
Q Consensus        37 ~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvly~~~g~~~  116 (319)
                      .-+|||+|         +..+|..||||||+|+|+.                 ++.+.+..++.+++++||+||.+|. +
T Consensus        20 ~~~lIDvR---------~~~ef~~ghIpGAiniP~~-----------------~l~~~l~~l~~~~~~~IVlyC~~G~-r   72 (104)
T PRK10287         20 AEHWIDVR---------VPEQYQQEHVQGAINIPLK-----------------EVKERIATAVPDKNDTVKLYCNAGR-Q   72 (104)
T ss_pred             CCEEEECC---------CHHHHhcCCCCccEECCHH-----------------HHHHHHHhcCCCCCCeEEEEeCCCh-H
Confidence            45799999         7899999999999999975                 3444666777777889999998765 5


Q ss_pred             hHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963          117 AARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus       117 a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      |..++..|..+||++|.+ .||+.+|.-
T Consensus        73 S~~aa~~L~~~G~~~v~~-~GG~~~~~~   99 (104)
T PRK10287         73 SGQAKEILSEMGYTHAEN-AGGLKDIAM   99 (104)
T ss_pred             HHHHHHHHHHcCCCeEEe-cCCHHHHhh
Confidence            888999999999999987 699999974

>PRK07411 hypothetical protein; Validated

Probab=99.54  E-value=8.6e-15  Score=138.88  Aligned_cols=103  Identities=18%  Similarity=0.390  Sum_probs=84.4

Q ss_pred             cccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 020963          190 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  267 (319)
Q Consensus       190 ~~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~  267 (319)
                      ..++++++.+.++.+  +++|||||++.||           ..||||||+|||+.++.....    .++    +.  .++
T Consensus       282 ~~Is~~el~~~l~~~~~~~vlIDVR~~~E~-----------~~ghIpGAiniP~~~l~~~~~----~~~----l~--~l~  340 (390)
T PRK07411        282 PEMTVTELKALLDSGADDFVLIDVRNPNEY-----------EIARIPGSVLVPLPDIENGPG----VEK----VK--ELL  340 (390)
T ss_pred             CccCHHHHHHHHhCCCCCeEEEECCCHHHh-----------ccCcCCCCEEccHHHhhcccc----hHH----Hh--hcC
Confidence            479999999988654  4789999999999           689999999999988754211    122    22  356


Q ss_pred             CCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCC
Q 020963          268 LEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  315 (319)
Q Consensus       268 ~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~  315 (319)
                      ++++||+||.+|.||..++..|+.+||++ +.++||+.+|..+. .|.
T Consensus       341 ~d~~IVvyC~~G~RS~~aa~~L~~~G~~~-~~l~GG~~~W~~~~-~p~  386 (390)
T PRK07411        341 NGHRLIAHCKMGGRSAKALGILKEAGIEG-TNVKGGITAWSREV-DPS  386 (390)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHHcCCCe-EEecchHHHHHHhc-CCC
Confidence            78999999999999999999999999985 57999999999885 453

>PRK05320 rhodanese superfamily protein; Provisional

Probab=99.54  E-value=2.1e-14  Score=128.56  Aligned_cols=101  Identities=25%  Similarity=0.321  Sum_probs=79.9

Q ss_pred             CCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHH
Q 020963           21 EPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA   94 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~   94 (319)
                      ...|+++++.+++++.      +++|||||         +..+|..||||||+|+|+..+...          ++.+.+.
T Consensus       109 ~~~is~~el~~~l~~~~~~~~~~~vlIDVR---------~~~E~~~Ghi~GAiniPl~~f~~~----------~~~l~~~  169 (257)
T PRK05320        109 APSVDAATLKRWLDQGHDDAGRPVVMLDTR---------NAFEVDVGTFDGALDYRIDKFTEF----------PEALAAH  169 (257)
T ss_pred             CceeCHHHHHHHHhccccccCCCeEEEECC---------CHHHHccCccCCCEeCChhHhhhh----------HHHHHhh
Confidence            4689999999988652      48999999         789999999999999998765331          1112211


Q ss_pred             HHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963           95 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus        95 ~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      ...   .++++||+||..|.+ +..++..|+..||++|+.|.||+.+|.+
T Consensus       170 ~~~---~kdk~IvvyC~~G~R-s~~Aa~~L~~~Gf~~V~~L~GGi~~w~~  215 (257)
T PRK05320        170 RAD---LAGKTVVSFCTGGIR-CEKAAIHMQEVGIDNVYQLEGGILKYFE  215 (257)
T ss_pred             hhh---cCCCeEEEECCCCHH-HHHHHHHHHHcCCcceEEeccCHHHHHH
Confidence            111   267899999988765 8888899999999999999999999986

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=99.54  E-value=2.5e-14  Score=135.91  Aligned_cols=102  Identities=21%  Similarity=0.334  Sum_probs=84.3

Q ss_pred             CCCCcccHHHHHHhcCCC-CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHh
Q 020963           19 PKEPVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA   97 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~-~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~   97 (319)
                      .....|+++++.++++++ +++|||+|         +..+|..||||||+|+|+..+...           +.    +. 
T Consensus       284 ~~~~~Is~~el~~~l~~~~~~~lIDvR---------~~~ef~~ghIpGAinip~~~l~~~-----------~~----~~-  338 (392)
T PRK07878        284 AAGSTITPRELKEWLDSGKKIALIDVR---------EPVEWDIVHIPGAQLIPKSEILSG-----------EA----LA-  338 (392)
T ss_pred             CCCCccCHHHHHHHHhCCCCeEEEECC---------CHHHHhcCCCCCCEEcChHHhcch-----------hH----Hh-
Confidence            346789999999999764 58999999         789999999999999998765320           01    11 


Q ss_pred             CCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCC
Q 020963           98 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  147 (319)
Q Consensus        98 ~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~  147 (319)
                       .++++++||+||..|.+ +..+++.|+..||++|++|+||+.+|.+...
T Consensus       339 -~l~~d~~iVvyC~~G~r-S~~aa~~L~~~G~~~V~~L~GG~~~W~~~~~  386 (392)
T PRK07878        339 -KLPQDRTIVLYCKTGVR-SAEALAALKKAGFSDAVHLQGGVVAWAKQVD  386 (392)
T ss_pred             -hCCCCCcEEEEcCCChH-HHHHHHHHHHcCCCcEEEecCcHHHHHHhcC
Confidence             25688999999987764 8999999999999999999999999987754

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.53  E-value=5.5e-14  Score=109.45  Aligned_cols=99  Identities=28%  Similarity=0.459  Sum_probs=79.2

Q ss_pred             HHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcC-ceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCC
Q 020963           26 VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG-ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKD  104 (319)
Q Consensus        26 ~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpg-Ai~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  104 (319)
                      ..........++.+|||||         ...+|..+|||+ ++|+|...+.....                 ....++++
T Consensus         9 ~~~~~~~~~~~~~~liDvR---------~~~e~~~~~i~~~~~~ip~~~~~~~~~-----------------~~~~~~~~   62 (110)
T COG0607           9 EDEAALLLAGEDAVLLDVR---------EPEEYERGHIPGAAINIPLSELKAAEN-----------------LLELPDDD   62 (110)
T ss_pred             HHHHHHhhccCCCEEEecc---------ChhHhhhcCCCcceeeeecccchhhhc-----------------ccccCCCC
Confidence            3333444455679999998         568999999999 99999987644210                 00046789


Q ss_pred             eEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCccc
Q 020963          105 GLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus       105 ~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                      ++|+||..|.+ +..++..|+..||+++..+.||+.+|...++++..
T Consensus        63 ~ivv~C~~G~r-S~~aa~~L~~~G~~~~~~l~gG~~~w~~~~~~~~~  108 (110)
T COG0607          63 PIVVYCASGVR-SAAAAAALKLAGFTNVYNLDGGIDAWKGAGLPLVR  108 (110)
T ss_pred             eEEEEeCCCCC-hHHHHHHHHHcCCccccccCCcHHHHHhcCCCccc
Confidence            99999998875 78899999999999888999999999999998765

>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase

Probab=99.53  E-value=1.2e-14  Score=117.52  Aligned_cols=105  Identities=18%  Similarity=0.179  Sum_probs=76.9

Q ss_pred             ccCHHHHHHHhhc--CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCC---C------CCCCHHHHHH
Q 020963          191 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---Q------TLLPADELKK  259 (319)
Q Consensus       191 ~is~~~l~~~~~~--~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~---~------~~~~~~~l~~  259 (319)
                      .|+++++.+.++.  .+++|||+|+..+|           ..||||||+|+|+..+....   +      .+.+ ++..+
T Consensus         1 ~is~~~l~~~l~~~~~~~~iiDvR~~~~~-----------~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   68 (132)
T cd01446           1 TIDCAWLAALLREGGERLLLLDCRPFLEY-----------SSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSC-PEDRD   68 (132)
T ss_pred             CcCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hhCcccCcEecChHHHHHHhhcccchhhhhhcCC-HHHHH
Confidence            3788999999875  47999999999999           68999999999998744211   1      1222 23334


Q ss_pred             HHHHcCCCCCCCEEEecCCcHH---------HHHHHHHHHh--cCCCCceeeeCcHHHHhCC
Q 020963          260 RFEQEGISLEKPVVTACGTGVT---------ACILALGLNR--LGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~G~r---------a~~~~~~L~~--~G~~~v~~~~Gg~~~W~~~  310 (319)
                      .+..  . ++++|||||..+.+         +..++..|..  .++.+|++++||+.+|...
T Consensus        69 ~l~~--~-~~~~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~~  127 (132)
T cd01446          69 RLRR--G-ESLAVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSSE  127 (132)
T ss_pred             HHhc--C-CCCeEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHhh
Confidence            4442  2 68899999998764         5555555655  3667899999999999875

This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.51  E-value=2.4e-14  Score=134.27  Aligned_cols=95  Identities=21%  Similarity=0.382  Sum_probs=79.9

Q ss_pred             ccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          189 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      ...++.+++.+..  .+.+|||||+++||           ..||||||+|+|+.++....             ....+++
T Consensus       260 ~~~i~~~~~~~~~--~~~~IIDVR~~~ef-----------~~ghIpgAinip~~~l~~~~-------------~~~~~~~  313 (355)
T PRK05597        260 GEVLDVPRVSALP--DGVTLIDVREPSEF-----------AAYSIPGAHNVPLSAIREGA-------------NPPSVSA  313 (355)
T ss_pred             ccccCHHHHHhcc--CCCEEEECCCHHHH-----------ccCcCCCCEEeCHHHhhhcc-------------ccccCCC
Confidence            3477888888554  35889999999999           68999999999998765421             1114678


Q ss_pred             CCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      +++||+||++|.+|..+++.|+.+||++|++|+||+.+|..
T Consensus       314 ~~~IvvyC~~G~rS~~Aa~~L~~~G~~nV~~L~GGi~~W~~  354 (355)
T PRK05597        314 GDEVVVYCAAGVRSAQAVAILERAGYTGMSSLDGGIEGWLD  354 (355)
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCCEEEecCcHHHHhh
Confidence            89999999999999999999999999999999999999975

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=99.49  E-value=6.8e-14  Score=130.08  Aligned_cols=104  Identities=18%  Similarity=0.310  Sum_probs=75.9

Q ss_pred             HHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCC---------CC---------CCCCHH
Q 020963          194 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA---------SQ---------TLLPAD  255 (319)
Q Consensus       194 ~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~---------~~---------~~~~~~  255 (319)
                      .+++.+.+. .+..|||||++.||           ..||||||+|+|+.+....         .+         .+.+ .
T Consensus         5 ~~~~~~~~~-~~~~lIDVRsp~Ef-----------~~ghIpgAiniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~-~   71 (345)
T PRK11784          5 AQDFRALFL-NDTPLIDVRSPIEF-----------AEGHIPGAINLPLLNDEERAEVGTCYKQQGQFAAIALGHALVA-G   71 (345)
T ss_pred             HHHHHHHHh-CCCEEEECCCHHHH-----------hcCCCCCeeeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcc-h
Confidence            455555543 46899999999999           6899999999999543211         01         1122 2


Q ss_pred             HHHHHHHHc--CC-CCCCCEEEecC-CcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          256 ELKKRFEQE--GI-SLEKPVVTACG-TGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       256 ~l~~~l~~~--~~-~~~~~vivyC~-~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                      .+.+.+.+.  .+ +++++||+||. +|.||..+++.|+.+|| ++++++||+.+|...+
T Consensus        72 ~l~~~~~~~~~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~G~-~v~~L~GG~~awr~~~  130 (345)
T PRK11784         72 NIAAHREEAWADFPRANPRGLLYCWRGGLRSGSVQQWLKEAGI-DVPRLEGGYKAYRRFV  130 (345)
T ss_pred             hHHHHHHHHHHhcccCCCeEEEEECCCChHHHHHHHHHHHcCC-CcEEEcCCHHHHHHhh
Confidence            233332221  22 47899999995 78999999999999999 5999999999999864

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=99.47  E-value=2.3e-13  Score=120.03  Aligned_cols=125  Identities=19%  Similarity=0.277  Sum_probs=102.3

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCC-CCCCCCCCccccCCCcccCcccccCCC----CCCCCHHHHHHHHHHc
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDA-PEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQE  264 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~-~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~~~l~~~l~~~  264 (319)
                      .+++.+|+.+++.+.+.+|||..-   |.-.. ..+...+..-|||||.+++++.+....    +.+..++.|.+.++.+
T Consensus         5 ~iv~~~~v~~~~~~~~~~iLDaSw---~~~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e~Fa~y~~~l   81 (286)
T KOG1529|consen    5 SIVSVKWVMENLGNHGLRILDASW---YFPPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAEHFAEYASRL   81 (286)
T ss_pred             cccChHHHHHhCcCCCeEEEeeee---ecCchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHHHHHHHHHhc
Confidence            378999999999888899999871   10000 011222367799999999998886543    4677889999999999


Q ss_pred             CCCCCCCEEEecC--CcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          265 GISLEKPVVTACG--TGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       265 ~~~~~~~vivyC~--~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      |++++..+|||.+  .|+ .|++++|.++.+|+.+|.+++||+..|+..+ +|+.++
T Consensus        82 Gi~n~d~vViYd~~~~Gm~~Asrv~W~fr~fGh~~VslL~GG~~~Wk~~g-~~~~s~  137 (286)
T KOG1529|consen   82 GVDNGDHVVIYDRGDGGMFSASRVWWTFRVFGHTKVSLLNGGFRAWKAAG-GPVDSS  137 (286)
T ss_pred             CCCCCCeEEEEcCCCcceeehhhHHHHHHHhCccEEEEecCcHHHHHHcC-Cccccc
Confidence            9999999999998  775 7889999999999999999999999999995 898875

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=99.45  E-value=9.7e-14  Score=127.28  Aligned_cols=98  Identities=24%  Similarity=0.293  Sum_probs=70.1

Q ss_pred             CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCC--CCC-C--C------------HHHHHHHHHHc--C
Q 020963          205 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS--QTL-L--P------------ADELKKRFEQE--G  265 (319)
Q Consensus       205 ~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~--~~~-~--~------------~~~l~~~l~~~--~  265 (319)
                      ...|||||++.||           ..||||||+|+|+.......  +++ +  +            ...|...+...  -
T Consensus         2 ~~~liDVRsp~Ef-----------~~ghipgAiniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~   70 (311)
T TIGR03167         2 FDPLIDVRSPAEF-----------AEGHLPGAINLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAF   70 (311)
T ss_pred             CCEEEECCCHHHH-----------hcCCCcCCEecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhh
Confidence            4679999999999           68999999999985422110  110 0  0            01233333321  2


Q ss_pred             CCCCCCEEEecC-CcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCC
Q 020963          266 ISLEKPVVTACG-TGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  315 (319)
Q Consensus       266 ~~~~~~vivyC~-~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~  315 (319)
                      .+++..||+||. +|.||..+++.|+.+|| ++++++||+.+|...+ .+.
T Consensus        71 ~~~~~~vvvyC~~gG~RS~~aa~~L~~~G~-~v~~L~GG~~aw~~~~-~~~  119 (311)
T TIGR03167        71 ADGPPQPLLYCWRGGMRSGSLAWLLAQIGF-RVPRLEGGYKAYRRFV-IDQ  119 (311)
T ss_pred             cCCCCcEEEEECCCChHHHHHHHHHHHcCC-CEEEecChHHHHHHhh-hhh
Confidence            344555999995 79999999999999999 6999999999999875 443

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.44  E-value=3e-13  Score=126.87  Aligned_cols=96  Identities=23%  Similarity=0.360  Sum_probs=77.8

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      ...++++++.+...  +.+|||+|         +..+|..+|||||+|+|+..+...                 +....+
T Consensus       260 ~~~i~~~~~~~~~~--~~~IIDVR---------~~~ef~~ghIpgAinip~~~l~~~-----------------~~~~~~  311 (355)
T PRK05597        260 GEVLDVPRVSALPD--GVTLIDVR---------EPSEFAAYSIPGAHNVPLSAIREG-----------------ANPPSV  311 (355)
T ss_pred             ccccCHHHHHhccC--CCEEEECC---------CHHHHccCcCCCCEEeCHHHhhhc-----------------cccccC
Confidence            45788999985543  57999999         788999999999999998765331                 011135


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhC
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~  145 (319)
                      +++++||+||..|. ++.++++.|+.+||++|+.|+||+.+|.++
T Consensus       312 ~~~~~IvvyC~~G~-rS~~Aa~~L~~~G~~nV~~L~GGi~~W~~~  355 (355)
T PRK05597        312 SAGDEVVVYCAAGV-RSAQAVAILERAGYTGMSSLDGGIEGWLDS  355 (355)
T ss_pred             CCCCeEEEEcCCCH-HHHHHHHHHHHcCCCCEEEecCcHHHHhhC
Confidence            67889999998776 488999999999999999999999999753

>PRK07411 hypothetical protein; Validated

Probab=99.44  E-value=3.6e-13  Score=127.83  Aligned_cols=106  Identities=22%  Similarity=0.332  Sum_probs=82.9

Q ss_pred             CCCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 020963           19 PKEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS   96 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~   96 (319)
                      .....|++++|.++++++  +++|||+|         +..+|..||||||+|+|+..+....        ..+++.+   
T Consensus       279 ~~~~~Is~~el~~~l~~~~~~~vlIDVR---------~~~E~~~ghIpGAiniP~~~l~~~~--------~~~~l~~---  338 (390)
T PRK07411        279 AEIPEMTVTELKALLDSGADDFVLIDVR---------NPNEYEIARIPGSVLVPLPDIENGP--------GVEKVKE---  338 (390)
T ss_pred             cccCccCHHHHHHHHhCCCCCeEEEECC---------CHHHhccCcCCCCEEccHHHhhccc--------chHHHhh---
Confidence            345689999999998754  58999999         7889999999999999987664310        0112221   


Q ss_pred             hCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCc
Q 020963           97 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  149 (319)
Q Consensus        97 ~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~  149 (319)
                         +.++++||+||..|. +|..+++.|+.+||++ ..|+||+.+|.+...|.
T Consensus       339 ---l~~d~~IVvyC~~G~-RS~~aa~~L~~~G~~~-~~l~GG~~~W~~~~~p~  386 (390)
T PRK07411        339 ---LLNGHRLIAHCKMGG-RSAKALGILKEAGIEG-TNVKGGITAWSREVDPS  386 (390)
T ss_pred             ---cCCCCeEEEECCCCH-HHHHHHHHHHHcCCCe-EEecchHHHHHHhcCCC
Confidence               346789999998776 4889999999999985 57999999998875543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=99.41  E-value=2.5e-13  Score=127.87  Aligned_cols=94  Identities=17%  Similarity=0.258  Sum_probs=76.2

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccC---CCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVP---GSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  267 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIp---gA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~  267 (319)
                      .++++++.+.+.+++.+|||||++.||           ..||||   ||+|||+..+....       .....+.  .++
T Consensus       272 ~~~~~el~~~l~~~~~~lIDVR~~~E~-----------~~ghI~~~~gAinIPl~~l~~~~-------~~~~~l~--~~~  331 (370)
T PRK05600        272 RTDTTSLIDATLNGSATLLDVREPHEV-----------LLKDLPEGGASLKLPLSAITDDA-------DILHALS--PID  331 (370)
T ss_pred             ccCHHHHHHHHhcCCeEEEECCCHHHh-----------hhccCCCCCccEeCcHHHhhcch-------hhhhhcc--ccC
Confidence            688999999888777899999999999           689998   69999998874321       0111122  344


Q ss_pred             CCCCEEEecCCcHHHHHHHHHHHhcCCCC-ceeeeCcHH
Q 020963          268 LEKPVVTACGTGVTACILALGLNRLGKHD-VAVYDGSWT  305 (319)
Q Consensus       268 ~~~~vivyC~~G~ra~~~~~~L~~~G~~~-v~~~~Gg~~  305 (319)
                      ++ +|||||.+|.||..++..|+.+||.+ |+++.||+.
T Consensus       332 ~~-~Ivv~C~sG~RS~~Aa~~L~~~G~~~~v~~l~GG~~  369 (370)
T PRK05600        332 GD-NVVVYCASGIRSADFIEKYSHLGHELTLHNLPGGVN  369 (370)
T ss_pred             CC-cEEEECCCChhHHHHHHHHHHcCCCCceEEeccccC
Confidence            44 99999999999999999999999986 899999975

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=99.27  E-value=8e-12  Score=117.68  Aligned_cols=95  Identities=22%  Similarity=0.328  Sum_probs=74.3

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCc---CceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           22 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIP---GALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIp---gAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      ..++++++.+++++++.+|||||         +..||..||||   ||+|+|+..+....           .+.+.+.  
T Consensus       271 ~~~~~~el~~~l~~~~~~lIDVR---------~~~E~~~ghI~~~~gAinIPl~~l~~~~-----------~~~~~l~--  328 (370)
T PRK05600        271 ARTDTTSLIDATLNGSATLLDVR---------EPHEVLLKDLPEGGASLKLPLSAITDDA-----------DILHALS--  328 (370)
T ss_pred             cccCHHHHHHHHhcCCeEEEECC---------CHHHhhhccCCCCCccEeCcHHHhhcch-----------hhhhhcc--
Confidence            37899999999988778999999         78999999998   59999988764310           0111111  


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCc-eEEecCCHH
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLP  140 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~-v~~l~GG~~  140 (319)
                      .+++ .+||+||..|.+ +..++..|+..||++ |+.|.||+.
T Consensus       329 ~~~~-~~Ivv~C~sG~R-S~~Aa~~L~~~G~~~~v~~l~GG~~  369 (370)
T PRK05600        329 PIDG-DNVVVYCASGIR-SADFIEKYSHLGHELTLHNLPGGVN  369 (370)
T ss_pred             ccCC-CcEEEECCCChh-HHHHHHHHHHcCCCCceEEeccccC
Confidence            2334 489999998875 888999999999986 999999975

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional

Probab=99.13  E-value=6.7e-11  Score=115.43  Aligned_cols=73  Identities=25%  Similarity=0.350  Sum_probs=63.4

Q ss_pred             CCcEEEeccCCCcccCCCCCCCCCCCccccCC----CcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCc
Q 020963          204 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPG----SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTG  279 (319)
Q Consensus       204 ~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpg----A~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G  279 (319)
                      ++.+|||||+++||           ..|||||    |+|+|+.++.             ..+.  .++++++||+||++|
T Consensus       406 ~~~~lIDVR~~~E~-----------~~~hI~g~~~~a~niP~~~l~-------------~~~~--~l~~~~~iivyC~~G  459 (482)
T PRK01269        406 PDDVIIDIRSPDEQ-----------EDKPLKLEGVEVKSLPFYKLS-------------TQFG--DLDQSKTYLLYCDRG  459 (482)
T ss_pred             CCCEEEECCCHHHH-----------hcCCCCCCCceEEECCHHHHH-------------HHHh--hcCCCCeEEEECCCC
Confidence            46889999999999           6899999    9999996653             2334  467889999999999


Q ss_pred             HHHHHHHHHHHhcCCCCceeeeC
Q 020963          280 VTACILALGLNRLGKHDVAVYDG  302 (319)
Q Consensus       280 ~ra~~~~~~L~~~G~~~v~~~~G  302 (319)
                      .||..++..|..+||.||++|.+
T Consensus       460 ~rS~~aa~~L~~~G~~nv~~y~~  482 (482)
T PRK01269        460 VMSRLQALYLREQGFSNVKVYRP  482 (482)
T ss_pred             HHHHHHHHHHHHcCCccEEecCC
Confidence            99999999999999999999853

>COG1054 Predicted sulfurtransferase [General function prediction only]

Probab=99.00  E-value=8.4e-10  Score=98.16  Aligned_cols=102  Identities=14%  Similarity=0.176  Sum_probs=86.1

Q ss_pred             ccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH-cCCC
Q 020963          189 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ-EGIS  267 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~-~~~~  267 (319)
                      ...+++++..+++.++++++||+|..-||           ..||..||++.+...|..          +.++.++ ...-
T Consensus       112 G~yl~p~~wn~~l~D~~~vviDtRN~YE~-----------~iG~F~gAv~p~~~tFre----------fP~~v~~~~~~~  170 (308)
T COG1054         112 GTYLSPKDWNELLSDPDVVVIDTRNDYEV-----------AIGHFEGAVEPDIETFRE----------FPAWVEENLDLL  170 (308)
T ss_pred             cCccCHHHHHHHhcCCCeEEEEcCcceeE-----------eeeeecCccCCChhhhhh----------hHHHHHHHHHhc
Confidence            45788999999999999999999999999           689999999999888743          2223331 1344


Q ss_pred             CCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          268 LEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       268 ~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                      ++++|+.||..|.|+--+...|...||++|+-|+||...+....
T Consensus       171 ~~KkVvmyCTGGIRCEKas~~m~~~GF~eVyhL~GGIl~Y~e~~  214 (308)
T COG1054         171 KDKKVVMYCTGGIRCEKASAWMKENGFKEVYHLEGGILKYLEDV  214 (308)
T ss_pred             cCCcEEEEcCCceeehhhHHHHHHhcchhhhcccchHHHHhhhc
Confidence            57799999999999999999999999999999999999887763

>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=8e-10  Score=99.79  Aligned_cols=102  Identities=16%  Similarity=0.154  Sum_probs=73.3

Q ss_pred             CCCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHH
Q 020963           19 PKEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFA   92 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~   92 (319)
                      ..-..||++.|+.+++..      .++|||||         -+-+|..|||+||+|++......                
T Consensus       153 ~~~k~Is~etl~~ll~~~~~~~~~~~~iiDcR---------~pyEY~GGHIkgavnl~~~~~~~----------------  207 (325)
T KOG3772|consen  153 QDLKYISPETLKGLLQGKFSDFFDKFIIIDCR---------YPYEYEGGHIKGAVNLYSKELLQ----------------  207 (325)
T ss_pred             ccccccCHHHHHHHHHhccccceeeEEEEEeC---------CcccccCcccccceecccHhhhh----------------
Confidence            346899999999999752      36799999         34699999999999998765322                


Q ss_pred             HHHHhCCC----CCCCeEEEEcCCCcchhHHHHHHHHH------------hcCCceEEecCCHHHHHhC
Q 020963           93 AAVSALGL----ENKDGLVVYDGKGIFSAARVWWMFRV------------FGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus        93 ~~~~~~~i----~~~~~vvly~~~g~~~a~~~~~~l~~------------~G~~~v~~l~GG~~~W~~~  145 (319)
                      ..+....+    .+...+||||.-...+..++|..|+.            +-|..+++|+||+..|-..
T Consensus       208 ~~f~~~~~~~~~~~~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~~  276 (325)
T KOG3772|consen  208 DFFLLKDGVPSGSKRVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFSN  276 (325)
T ss_pred             hhhccccccccccCceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHHh
Confidence            11111111    13467788997554557788888883            4456899999999998654

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=98.91  E-value=1.5e-09  Score=97.96  Aligned_cols=106  Identities=18%  Similarity=0.240  Sum_probs=85.2

Q ss_pred             cCCccccCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHc
Q 020963          186 FQPHLIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE  264 (319)
Q Consensus       186 ~~~~~~is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~  264 (319)
                      +.+...|+..+..+.+++ ...+++|||++-||           ..-|+|+|+|||+.++.+..+     +++...    
T Consensus       313 L~~~~Rvsv~d~k~il~~~~~h~llDvRp~~~~-----------eI~~lP~avNIPL~~l~~~~~-----~~~~~~----  372 (427)
T KOG2017|consen  313 LEPDERVSVTDYKRILDSGAKHLLLDVRPSHEY-----------EICRLPEAVNIPLKELRSRSG-----KKLQGD----  372 (427)
T ss_pred             CChhhcccHHHHHHHHhcCCCeEEEeccCcceE-----------EEEecccccccchhhhhhhhh-----hhhccc----
Confidence            456778999999999876 57999999999999           689999999999999876543     111111    


Q ss_pred             CCCCCCCEEEecCCcHHHHHHHHHHHhcCC-CCceeeeCcHHHHhCCC
Q 020963          265 GISLEKPVVTACGTGVTACILALGLNRLGK-HDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       265 ~~~~~~~vivyC~~G~ra~~~~~~L~~~G~-~~v~~~~Gg~~~W~~~~  311 (319)
                      --+..++|+|.|+.|..|..|.++|+.... .+++...||+.+|...-
T Consensus       373 ~~~~~~~I~ViCrrGNdSQ~Av~~Lre~~~~~~vrDvigGl~~w~~~v  420 (427)
T KOG2017|consen  373 LNTESKDIFVICRRGNDSQRAVRILREKFPDSSVRDVIGGLKAWAAKV  420 (427)
T ss_pred             ccccCCCEEEEeCCCCchHHHHHHHHhhCCchhhhhhhhHHHHHHHhc
Confidence            113467899999999999999999997544 57888999999999864

>COG1054 Predicted sulfurtransferase [General function prediction only]

Probab=98.90  E-value=1.8e-09  Score=96.01  Aligned_cols=102  Identities=21%  Similarity=0.294  Sum_probs=78.6

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      ...|+|++..+++.++++++||+|         ..-||..||..|||+.+...+...          ++-+++..   ..
T Consensus       112 G~yl~p~~wn~~l~D~~~vviDtR---------N~YE~~iG~F~gAv~p~~~tFref----------P~~v~~~~---~~  169 (308)
T COG1054         112 GTYLSPKDWNELLSDPDVVVIDTR---------NDYEVAIGHFEGAVEPDIETFREF----------PAWVEENL---DL  169 (308)
T ss_pred             cCccCHHHHHHHhcCCCeEEEEcC---------cceeEeeeeecCccCCChhhhhhh----------HHHHHHHH---Hh
Confidence            568999999999999999999998         567999999999999998776542          11222222   23


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhC
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~  145 (319)
                      -++++|+.||..|.+ =-++...|+..||++|+-|+||+-.+-+.
T Consensus       170 ~~~KkVvmyCTGGIR-CEKas~~m~~~GF~eVyhL~GGIl~Y~e~  213 (308)
T COG1054         170 LKDKKVVMYCTGGIR-CEKASAWMKENGFKEVYHLEGGILKYLED  213 (308)
T ss_pred             ccCCcEEEEcCCcee-ehhhHHHHHHhcchhhhcccchHHHHhhh
Confidence            366799999998876 34445567778999999999999776543

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional

Probab=98.81  E-value=1.3e-08  Score=99.44  Aligned_cols=80  Identities=14%  Similarity=0.119  Sum_probs=62.6

Q ss_pred             HHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcC----ceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCC
Q 020963           28 WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG----ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  103 (319)
Q Consensus        28 ~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpg----Ai~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  103 (319)
                      ++.+.+.. +.+|||+|         +.++|..+||||    |+|+|+..+..                 .+..  ++++
T Consensus       399 ~~~~~~~~-~~~lIDVR---------~~~E~~~~hI~g~~~~a~niP~~~l~~-----------------~~~~--l~~~  449 (482)
T PRK01269        399 ETVSELPP-DDVIIDIR---------SPDEQEDKPLKLEGVEVKSLPFYKLST-----------------QFGD--LDQS  449 (482)
T ss_pred             HHHHhcCC-CCEEEECC---------CHHHHhcCCCCCCCceEEECCHHHHHH-----------------HHhh--cCCC
Confidence            34444433 67999999         789999999999    99999875422                 2222  4677


Q ss_pred             CeEEEEcCCCcchhHHHHHHHHHhcCCceEEecC
Q 020963          104 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDG  137 (319)
Q Consensus       104 ~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~G  137 (319)
                      +++|+||..|.+ |..++..|+.+||+||+++.+
T Consensus       450 ~~iivyC~~G~r-S~~aa~~L~~~G~~nv~~y~~  482 (482)
T PRK01269        450 KTYLLYCDRGVM-SRLQALYLREQGFSNVKVYRP  482 (482)
T ss_pred             CeEEEECCCCHH-HHHHHHHHHHcCCccEEecCC
Confidence            899999998875 889999999999999998753

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=98.72  E-value=1.5e-08  Score=91.62  Aligned_cols=106  Identities=22%  Similarity=0.258  Sum_probs=82.2

Q ss_pred             CCCCCCcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 020963           17 VSPKEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV   95 (319)
Q Consensus        17 ~~~~~~~Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~   95 (319)
                      +....-.||..++++.+++ ...+++|||         |.-+|...|+|+|+|||+..+.....             +.+
T Consensus       312 lL~~~~Rvsv~d~k~il~~~~~h~llDvR---------p~~~~eI~~lP~avNIPL~~l~~~~~-------------~~~  369 (427)
T KOG2017|consen  312 LLEPDERVSVTDYKRILDSGAKHLLLDVR---------PSHEYEICRLPEAVNIPLKELRSRSG-------------KKL  369 (427)
T ss_pred             cCChhhcccHHHHHHHHhcCCCeEEEecc---------CcceEEEEecccccccchhhhhhhhh-------------hhh
Confidence            3445678999999999987 579999999         88899999999999999987755311             111


Q ss_pred             HhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCC-ceEEecCCHHHHHhC
Q 020963           96 SALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHD-RVWVLDGGLPRWRAS  145 (319)
Q Consensus        96 ~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~-~v~~l~GG~~~W~~~  145 (319)
                      +...-....+|++.|+.|.. +.++.|+|+...++ +|+.+-||+.+|...
T Consensus       370 ~~~~~~~~~~I~ViCrrGNd-SQ~Av~~Lre~~~~~~vrDvigGl~~w~~~  419 (427)
T KOG2017|consen  370 QGDLNTESKDIFVICRRGND-SQRAVRILREKFPDSSVRDVIGGLKAWAAK  419 (427)
T ss_pred             cccccccCCCEEEEeCCCCc-hHHHHHHHHhhCCchhhhhhhhHHHHHHHh
Confidence            22222345678899998875 89999999987664 677888999999865

>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.71  E-value=2.3e-08  Score=90.51  Aligned_cols=99  Identities=17%  Similarity=0.302  Sum_probs=72.9

Q ss_pred             cccCHHHHHHHhhcC------CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  263 (319)
Q Consensus       190 ~~is~~~l~~~~~~~------~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~  263 (319)
                      ..||++.|+.+++..      .++|||+|-+-||           ..|||+||+||+..+.....           .+.+
T Consensus       156 k~Is~etl~~ll~~~~~~~~~~~~iiDcR~pyEY-----------~GGHIkgavnl~~~~~~~~~-----------f~~~  213 (325)
T KOG3772|consen  156 KYISPETLKGLLQGKFSDFFDKFIIIDCRYPYEY-----------EGGHIKGAVNLYSKELLQDF-----------FLLK  213 (325)
T ss_pred             cccCHHHHHHHHHhccccceeeEEEEEeCCcccc-----------cCcccccceecccHhhhhhh-----------hccc
Confidence            489999999888641      3779999999999           57999999999986643211           0011


Q ss_pred             cCC---CCCCCEEEecC-CcHHHHHHHHHHHh------------cCCCCceeeeCcHHHHhCC
Q 020963          264 EGI---SLEKPVVTACG-TGVTACILALGLNR------------LGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       264 ~~~---~~~~~vivyC~-~G~ra~~~~~~L~~------------~G~~~v~~~~Gg~~~W~~~  310 (319)
                      .+.   .....+||||- +-.|...++..|+.            +-|..+++|+||+.+|-..
T Consensus       214 ~~~~~~~~~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~~  276 (325)
T KOG3772|consen  214 DGVPSGSKRVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFSN  276 (325)
T ss_pred             cccccccCceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHHh
Confidence            111   23458999995 66788888888873            4566789999999999765

>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]

Probab=98.40  E-value=9.3e-07  Score=79.16  Aligned_cols=101  Identities=19%  Similarity=0.197  Sum_probs=77.1

Q ss_pred             CCCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHH
Q 020963           19 PKEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFA   92 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~   92 (319)
                      .+-+.|++|.|++.++..      ++.|||||         =+-||..|||-.|+||....                ++.
T Consensus       239 Ds~~RIs~etlk~vl~g~~~~~f~kCiIIDCR---------FeYEY~GGHIinaVNi~s~~----------------~l~  293 (427)
T COG5105         239 DSIQRISVETLKQVLEGMYNIDFLKCIIIDCR---------FEYEYRGGHIINAVNISSTK----------------KLG  293 (427)
T ss_pred             cchhhcCHHHHHHHHhchhhhhhhceeEEeec---------ceeeecCceeeeeeecchHH----------------HHH
Confidence            456899999999999752      48899999         45799999999999997532                444


Q ss_pred             HHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhc------------CCceEEecCCHHHHHh
Q 020963           93 AAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFG------------HDRVWVLDGGLPRWRA  144 (319)
Q Consensus        93 ~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G------------~~~v~~l~GG~~~W~~  144 (319)
                      -+|.....+-..-+|++|.-...++.++|..|+.+-            |..|++|+||+..+-.
T Consensus       294 ~~F~hkplThp~aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy~  357 (427)
T COG5105         294 LLFRHKPLTHPRALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFYS  357 (427)
T ss_pred             HHHHhccccCceeEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHhh
Confidence            455544455567788889866667999999888653            4579999999987643

>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]

Probab=97.68  E-value=0.00013  Score=65.76  Aligned_cols=98  Identities=18%  Similarity=0.326  Sum_probs=74.6

Q ss_pred             cccCHHHHHHHhhcC------CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  263 (319)
Q Consensus       190 ~~is~~~l~~~~~~~------~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~  263 (319)
                      ..|+.+-++..++..      +-.|||+|=+-||           ..|||-.||||...+            +|.-.+..
T Consensus       242 ~RIs~etlk~vl~g~~~~~f~kCiIIDCRFeYEY-----------~GGHIinaVNi~s~~------------~l~~~F~h  298 (427)
T COG5105         242 QRISVETLKQVLEGMYNIDFLKCIIIDCRFEYEY-----------RGGHIINAVNISSTK------------KLGLLFRH  298 (427)
T ss_pred             hhcCHHHHHHHHhchhhhhhhceeEEeecceeee-----------cCceeeeeeecchHH------------HHHHHHHh
Confidence            588999988888642      3559999988888           679999999998744            33333442


Q ss_pred             cCCCCCCCEEEecC-CcHHHHHHHHHHHhcC------------CCCceeeeCcHHHHhCC
Q 020963          264 EGISLEKPVVTACG-TGVTACILALGLNRLG------------KHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       264 ~~~~~~~~vivyC~-~G~ra~~~~~~L~~~G------------~~~v~~~~Gg~~~W~~~  310 (319)
                      .-++.-..+|++|. +..||...+..|+.+.            |..|++++||+...-..
T Consensus       299 kplThp~aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy~n  358 (427)
T COG5105         299 KPLTHPRALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFYSN  358 (427)
T ss_pred             ccccCceeEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHhhc
Confidence            23555678999996 7789999999998642            35789999999876554

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=96.74  E-value=0.013  Score=47.23  Aligned_cols=94  Identities=13%  Similarity=0.176  Sum_probs=51.1

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCC--cccCcccccCCCCCCCCH---HHHHHHHHHcC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTLLPA---DELKKRFEQEG  265 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA--~~ip~~~l~~~~~~~~~~---~~l~~~l~~~~  265 (319)
                      .++.+++..+.+.+=-.|||.|+..|-.+.-.... ......-+|-  +++|+..     +. .++   ..+.+.+.   
T Consensus        14 qlt~~d~~~L~~~GiktVIdlR~~~E~~~~p~~~~-~~~~a~~~gl~y~~iPv~~-----~~-~~~~~v~~f~~~~~---   83 (135)
T TIGR01244        14 QLTKADAAQAAQLGFKTVINNRPDREEESQPDFAQ-IKAAAEAAGVTYHHQPVTA-----GD-ITPDDVETFRAAIG---   83 (135)
T ss_pred             CCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHH-HHHHHHHCCCeEEEeecCC-----CC-CCHHHHHHHHHHHH---
Confidence            56777777665555577999999887532110000 0000000121  2333221     12 233   34444454   


Q ss_pred             CCCCCCEEEecCCcHHHHHHHHHH-HhcCCC
Q 020963          266 ISLEKPVVTACGTGVTACILALGL-NRLGKH  295 (319)
Q Consensus       266 ~~~~~~vivyC~~G~ra~~~~~~L-~~~G~~  295 (319)
                       ..++||++||.+|.|++.+|.++ ...|..
T Consensus        84 -~~~~pvL~HC~sG~Rt~~l~al~~~~~g~~  113 (135)
T TIGR01244        84 -AAEGPVLAYCRSGTRSSLLWGFRQAAEGVP  113 (135)
T ss_pred             -hCCCCEEEEcCCChHHHHHHHHHHHHcCCC
Confidence             24689999999999999887653 345653

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=96.65  E-value=0.011  Score=45.99  Aligned_cols=88  Identities=18%  Similarity=0.249  Sum_probs=42.5

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCC---CCCCCccccCCCcccCcccccCCCCCCCCH---HHHHHHHHHc
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEP---RKGIRSGHVPGSKCIPFPQMLDASQTLLPA---DELKKRFEQE  264 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~---~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~---~~l~~~l~~~  264 (319)
                      .++.+++.++.+.+=-.||+.|+..|-.+.-...   ..+...|  -.-+|+|...     +. .+.   +.|.+.|.  
T Consensus        14 Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~G--l~y~~iPv~~-----~~-~~~~~v~~f~~~l~--   83 (110)
T PF04273_consen   14 QPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALG--LQYVHIPVDG-----GA-ITEEDVEAFADALE--   83 (110)
T ss_dssp             S--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT---EEEE----T-----TT---HHHHHHHHHHHH--
T ss_pred             CCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcC--CeEEEeecCC-----CC-CCHHHHHHHHHHHH--
Confidence            6788999988887767899999887632110000   0000000  0123444432     11 223   44445555  


Q ss_pred             CCCCCCCEEEecCCcHHHHHHHHHHH
Q 020963          265 GISLEKPVVTACGTGVTACILALGLN  290 (319)
Q Consensus       265 ~~~~~~~vivyC~~G~ra~~~~~~L~  290 (319)
                      .  ..+||++||.+|.||+..|.+-+
T Consensus        84 ~--~~~Pvl~hC~sG~Ra~~l~~l~~  107 (110)
T PF04273_consen   84 S--LPKPVLAHCRSGTRASALWALAQ  107 (110)
T ss_dssp             T--TTTSEEEE-SCSHHHHHHHHHHH
T ss_pred             h--CCCCEEEECCCChhHHHHHHHHh
Confidence            2  24699999999999988777654

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>COG2603 Predicted ATPase [General function prediction only]

Probab=96.64  E-value=0.0041  Score=55.72  Aligned_cols=145  Identities=14%  Similarity=0.133  Sum_probs=79.5

Q ss_pred             HHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCccccccc----CCCCCCCCCCHHHHHHH----------
Q 020963           29 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR----TTNLPHMLPSEEAFAAA----------   94 (319)
Q Consensus        29 l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~----~~~~~~~~~~~~~~~~~----------   94 (319)
                      ..+.+......+||||         .+-+|..||.|+++|+|...=...    ..+.....+....+...          
T Consensus         7 ~~~~~~~~~~~lid~r---------ap~ef~~g~~~ia~nl~~~ndder~~Igt~yKk~~~~~a~alg~~~vcG~i~~~~   77 (334)
T COG2603           7 DYRALLLADTPLIDVR---------APIEFENGAMPIAINLPLMNDDERQEIGTCYKKQGQDAAKALGHALVCGEIRQQR   77 (334)
T ss_pred             HHHHHHhcCCceeecc---------chHHHhcccchhhhccccccchHHHHHHHHHhhcCcHHHHHHHHHHHHhHHHHHH
Confidence            3333333368999999         778999999999999997421000    00011011111111000          


Q ss_pred             HHh-CCCCCCCeEEEEcCCCcchhHHHHHHH-HHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHh
Q 020963           95 VSA-LGLENKDGLVVYDGKGIFSAARVWWMF-RVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVY  172 (319)
Q Consensus        95 ~~~-~~i~~~~~vvly~~~g~~~a~~~~~~l-~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  172 (319)
                      +.. .....+.++-++|..|+.++...+..| +..|.+ .--+.||+.+...                            
T Consensus        78 l~ask~f~e~~~~Gi~c~rgg~rsk~v~~~l~~~~g~~-~~r~iGGeKalrt----------------------------  128 (334)
T COG2603          78 LEASKAFQEENPVGILCARGGLRSKIVQKWLGYAAGID-YPRVIGGEKALRT----------------------------  128 (334)
T ss_pred             HHHHHHHHHhCCcceeeccccchhHHHHHHHHHHHHhh-hhhhhchHHHHHH----------------------------
Confidence            000 001123445555766666566655556 666664 4445666655331                            


Q ss_pred             cCcccCCcccccccCCccccCHHHHHHHhhcCCcEEEe-ccCCCcccCCCCCCCCCCCccccCCCcccCc
Q 020963          173 QGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVD-ARSKARFDGDAPEPRKGIRSGHVPGSKCIPF  241 (319)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~is~~~l~~~~~~~~~~liD-vR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~  241 (319)
                                         .........+..+.+++++ ++.+..+           .-...|+|+|++.
T Consensus       129 -------------------~~~~a~~~~i~~k~~il~g~Tgcgkt~-----------lve~lp~aidlE~  168 (334)
T COG2603         129 -------------------FAIQATIKEIAQKDFILCGCTGCGKTE-----------LVEQLPNAIDLEG  168 (334)
T ss_pred             -------------------HHHHHHHHHhccCCEEEeCCCCCcHHH-----------HHHhCCCccCcHh
Confidence                               1122344455556789999 7877777           5678899988873

>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=96.07  E-value=0.005  Score=54.41  Aligned_cols=107  Identities=18%  Similarity=0.257  Sum_probs=64.3

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccc-----cccCCCCCCCCCCHHHHHHHHH
Q 020963           22 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV-----ADRTTNLPHMLPSEEAFAAAVS   96 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l-----~~~~~~~~~~~~~~~~~~~~~~   96 (319)
                      ..+|.+||.+.+..++++++|||         +    ...||.+|+|+-+.-+     ....-.++.++|........-.
T Consensus         4 ~~~s~~wlnr~l~~~nllllDCR---------s----es~~i~~A~~valPalmlrrl~~g~l~~ra~~p~~~d~~~~~~   70 (343)
T KOG1717|consen    4 ISKSVAWLNRQLELGNLLLLDCR---------S----ESSHIESAINVALPALMLRRLTGGNLPVRALFPRSCDDKRFPA   70 (343)
T ss_pred             HHHHHHHHHhhcccCceEEEecC---------C----ccchhhhhhhhcchHHHHHHHhCCCCcceeccCCccccccccc
Confidence            35789999999998899999998         4    4679999999775432     2222223333443322111100


Q ss_pred             hCCCCCCCeEEEEcCCCc------chhHH---HHHHHHHhcCCceEEecCCHHHHHhC
Q 020963           97 ALGLENKDGLVVYDGKGI------FSAAR---VWWMFRVFGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus        97 ~~~i~~~~~vvly~~~g~------~~a~~---~~~~l~~~G~~~v~~l~GG~~~W~~~  145 (319)
                         --+..+||+|+....      ..+..   .-..++..|. .++.|.|||..++.+
T Consensus        71 ---~c~~v~vilyD~~~~e~e~~~~~~s~Lg~ll~kl~~~g~-~a~yL~ggF~~fq~e  124 (343)
T KOG1717|consen   71 ---RCGTVTVILYDESSAEWEEETGAESVLGLLLKKLKDEGC-SARYLSGGFSKFQAE  124 (343)
T ss_pred             ---cCCcceeeecccccccccccchhhhHHHHHHHHHHhcCc-chhhhhcccchhhhh
Confidence               013367889975410      01222   2234555565 588999999887764

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=94.42  E-value=0.0081  Score=58.47  Aligned_cols=97  Identities=20%  Similarity=0.135  Sum_probs=62.7

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      -+.|+++++..+   +.+.++|.|         ...+|..+|+++++|+|+..-.+.   +.       .|... ....-
T Consensus       621 ~prmsAedl~~~---~~l~v~d~r---------~~~ef~r~~~s~s~nip~~~~ea~---l~-------~~~~l-~~~~~  677 (725)
T KOG1093|consen  621 CPRISAEDLIWL---KMLYVLDTR---------QESEFQREHFSDSINIPFNNHEAD---LD-------WLRFL-PGIVC  677 (725)
T ss_pred             CccccHHHHHHH---HHHHHHhHH---------HHHHHHHhhccccccCCccchHHH---HH-------Hhhcc-hHhHH
Confidence            467888888776   568999999         789999999999999998721111   11       11100 00001


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHH
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR  141 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~  141 (319)
                      .....+++++. +.-.+++....+..+-+.+++++.+|++.
T Consensus       678 ~~~~~~v~~~~-~~K~~~e~~~~~~~mk~p~~cil~~~~~~  717 (725)
T KOG1093|consen  678 SEGKKCVVVGK-NDKHAAERLTELYVMKVPRICILHDGFNN  717 (725)
T ss_pred             hhCCeEEEecc-chHHHHHHhhHHHHhcccHHHHHHHHHhh
Confidence            13455556643 33345665556666668889999999874

>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]

Probab=93.58  E-value=0.23  Score=47.33  Aligned_cols=100  Identities=22%  Similarity=0.321  Sum_probs=62.4

Q ss_pred             cccHHHHHHhcC--CC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           23 VVSVDWLHANLR--EP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        23 ~Is~~~l~~~l~--~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      .|++-+|.++-+  .+  ...|||||         |.+.|..||+..|.|++..-+          +..+++|+..+..+
T Consensus       308 pisv~el~~~~~~~~~~VrFFiVDcR---------paeqynaGHlstaFhlDc~lm----------lqeP~~Fa~av~sL  368 (669)
T KOG3636|consen  308 PISVIELTSHDEISSGSVRFFIVDCR---------PAEQYNAGHLSTAFHLDCVLM----------LQEPEKFAIAVNSL  368 (669)
T ss_pred             chhHHHhhcccccccCceEEEEEecc---------chhhcccccchhhhcccHHHH----------hcCHHHHHHHHHHH
Confidence            355556655432  22  36899999         899999999999999987643          33566776654332


Q ss_pred             ------CCCCC-----CeEEEEcCCC-----cchhHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963           99 ------GLENK-----DGLVVYDGKG-----IFSAARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus        99 ------~i~~~-----~~vvly~~~g-----~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                            .|..+     ..+.+.+ +|     .+.-..++-.|+ .+-..|+++.||+....
T Consensus       369 l~aqrqtie~~s~aggeHlcfmG-sGr~EED~YmnMviA~FlQ-Knk~yVS~~~GGy~~lh  427 (669)
T KOG3636|consen  369 LCAQRQTIERDSNAGGEHLCFMG-SGRDEEDNYMNMVIAMFLQ-KNKLYVSFVQGGYKKLH  427 (669)
T ss_pred             HHHHHHhhhccccCCcceEEEec-cCcchHHHHHHHHHHHHHh-cCceEEEEecchHHHHH
Confidence                  33322     3444443 22     222233444444 46668999999998754

>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.74  E-value=0.78  Score=35.93  Aligned_cols=90  Identities=12%  Similarity=0.113  Sum_probs=49.6

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccc--cCCCcccCcccccCCCCCCCCHH---HHHHHHHHcC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGH--VPGSKCIPFPQMLDASQTLLPAD---ELKKRFEQEG  265 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~gh--IpgA~~ip~~~l~~~~~~~~~~~---~l~~~l~~~~  265 (319)
                      .++++++......+=..||--|+..|=.|.-.........+|  +. -.+||..-      .=..++   .+++.+.   
T Consensus        15 Qi~~~D~~~iaa~GFksiI~nRPDgEe~~QP~~~~i~~aa~~aGl~-y~~iPV~~------~~iT~~dV~~f~~Al~---   84 (130)
T COG3453          15 QISPADIASIAALGFKSIICNRPDGEEPGQPGFAAIAAAAEAAGLT-YTHIPVTG------GGITEADVEAFQRALD---   84 (130)
T ss_pred             CCCHHHHHHHHHhccceecccCCCCCCCCCCChHHHHHHHHhcCCc-eEEeecCC------CCCCHHHHHHHHHHHH---
Confidence            677888887766655679999987764332110000000000  01 11233211      112233   3444444   


Q ss_pred             CCCCCCEEEecCCcHHHHHHHHHHHh
Q 020963          266 ISLEKPVVTACGTGVTACILALGLNR  291 (319)
Q Consensus       266 ~~~~~~vivyC~~G~ra~~~~~~L~~  291 (319)
                       ..+.||+.||++|.||...|.+-..
T Consensus        85 -eaegPVlayCrsGtRs~~ly~~~~~  109 (130)
T COG3453          85 -EAEGPVLAYCRSGTRSLNLYGLGEL  109 (130)
T ss_pred             -HhCCCEEeeecCCchHHHHHHHHHH
Confidence             3467999999999999988876543

>COG2603 Predicted ATPase [General function prediction only]

Probab=88.65  E-value=0.58  Score=42.33  Aligned_cols=92  Identities=22%  Similarity=0.307  Sum_probs=55.6

Q ss_pred             CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCccc------ccCCCCC-CCCH----------HHHH-HHHH-Hc
Q 020963          204 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQ------MLDASQT-LLPA----------DELK-KRFE-QE  264 (319)
Q Consensus       204 ~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~------l~~~~~~-~~~~----------~~l~-~~l~-~~  264 (319)
                      .+..|||||.+.+|           ..|+.|+++|+|.-.      +.....+ ..+.          .++. .+|+ ..
T Consensus        14 ~~~~lid~rap~ef-----------~~g~~~ia~nl~~~ndder~~Igt~yKk~~~~~a~alg~~~vcG~i~~~~l~ask   82 (334)
T COG2603          14 ADTPLIDVRAPIEF-----------ENGAMPIAINLPLMNDDERQEIGTCYKKQGQDAAKALGHALVCGEIRQQRLEASK   82 (334)
T ss_pred             cCCceeeccchHHH-----------hcccchhhhccccccchHHHHHHHHHhhcCcHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            36789999999999           699999999999622      1111111 1111          1111 1111 01


Q ss_pred             CCCCCCCEEEecC-CcHHHHHHHHHH-HhcCCCCceeeeCcHHHH
Q 020963          265 GISLEKPVVTACG-TGVTACILALGL-NRLGKHDVAVYDGSWTEW  307 (319)
Q Consensus       265 ~~~~~~~vivyC~-~G~ra~~~~~~L-~~~G~~~v~~~~Gg~~~W  307 (319)
                      ..--+.|+-++|. .|.|+-..+..| ...|.+ +--.-||....
T Consensus        83 ~f~e~~~~Gi~c~rgg~rsk~v~~~l~~~~g~~-~~r~iGGeKal  126 (334)
T COG2603          83 AFQEENPVGILCARGGLRSKIVQKWLGYAAGID-YPRVIGGEKAL  126 (334)
T ss_pred             HHHHhCCcceeeccccchhHHHHHHHHHHHHhh-hhhhhchHHHH
Confidence            2223566777796 678999988888 667876 43444776553

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=87.21  E-value=3.2  Score=33.26  Aligned_cols=109  Identities=17%  Similarity=0.181  Sum_probs=53.5

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCC--chh-hh----hhcCCcCceecCcccccccCCCCCCCCCCHHHHHHH
Q 020963           22 PVVSVDWLHANLREPDLKVLDASWYMPDEQRN--PFQ-EY----QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA   94 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~--~~~-~~----~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~   94 (319)
                      ..++++++..+.+.+=-.|||.|.   ..|+.  +.. ..    ....+. -+++|+..  .   .  ........|.+.
T Consensus        13 ~qlt~~d~~~L~~~GiktVIdlR~---~~E~~~~p~~~~~~~~a~~~gl~-y~~iPv~~--~---~--~~~~~v~~f~~~   81 (135)
T TIGR01244        13 PQLTKADAAQAAQLGFKTVINNRP---DREEESQPDFAQIKAAAEAAGVT-YHHQPVTA--G---D--ITPDDVETFRAA   81 (135)
T ss_pred             CCCCHHHHHHHHHCCCcEEEECCC---CCCCCCCCCHHHHHHHHHHCCCe-EEEeecCC--C---C--CCHHHHHHHHHH
Confidence            567888888765554468999991   11111  100 00    001111 24555431  0   0  011124456656


Q ss_pred             HHhCCCCCCCeEEEEcCCCcchhHHHHHH-HHHhcCCceEEecCCHHHHHhCCCCcc
Q 020963           95 VSALGLENKDGLVVYDGKGIFSAARVWWM-FRVFGHDRVWVLDGGLPRWRASGYDVE  150 (319)
Q Consensus        95 ~~~~~i~~~~~vvly~~~g~~~a~~~~~~-l~~~G~~~v~~l~GG~~~W~~~g~p~~  150 (319)
                      +..    .+.+|++||.+|.+ +..++.+ +...|.+.-.++.-    -++.|+.++
T Consensus        82 ~~~----~~~pvL~HC~sG~R-t~~l~al~~~~~g~~~~~i~~~----~~~~G~~~~  129 (135)
T TIGR01244        82 IGA----AEGPVLAYCRSGTR-SSLLWGFRQAAEGVPVEEIVRR----AQAAGYDLS  129 (135)
T ss_pred             HHh----CCCCEEEEcCCChH-HHHHHHHHHHHcCCCHHHHHHH----HHHcCCCcc
Confidence            653    35889999998884 5554433 33346543223332    144555554

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=87.08  E-value=1.4  Score=34.15  Aligned_cols=90  Identities=19%  Similarity=0.059  Sum_probs=39.0

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhh---hhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           22 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY---QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~---~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      ..|+++++.++.+.+=-.||+.|.+.-.+......+.   ...+==.-+++|+..- .      ......+.|.+.+...
T Consensus        13 ~Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~-~------~~~~~v~~f~~~l~~~   85 (110)
T PF04273_consen   13 GQPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGG-A------ITEEDVEAFADALESL   85 (110)
T ss_dssp             CS--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TT-T--------HHHHHHHHHHHHTT
T ss_pred             CCCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCC-C------CCHHHHHHHHHHHHhC
Confidence            4789999998888755689999922100000000000   0011011346665421 0      0112344566666553


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHH
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWM  123 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~  123 (319)
                          .+||++||.+|.+ +..+|.+
T Consensus        86 ----~~Pvl~hC~sG~R-a~~l~~l  105 (110)
T PF04273_consen   86 ----PKPVLAHCRSGTR-ASALWAL  105 (110)
T ss_dssp             ----TTSEEEE-SCSHH-HHHHHHH
T ss_pred             ----CCCEEEECCCChh-HHHHHHH
Confidence                3689999998875 5555443

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=83.81  E-value=3  Score=37.35  Aligned_cols=99  Identities=19%  Similarity=0.309  Sum_probs=59.2

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCC---CCCCCCHHHHHHHHH---Hc
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA---SQTLLPADELKKRFE---QE  264 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~---~~~~~~~~~l~~~l~---~~  264 (319)
                      .++.+|+.+.+..++++++|+|+.               ..||.+|+++-+.-+..+   .+.+.    +++.+-   ..
T Consensus         5 ~~s~~wlnr~l~~~nllllDCRse---------------s~~i~~A~~valPalmlrrl~~g~l~----~ra~~p~~~d~   65 (343)
T KOG1717|consen    5 SKSVAWLNRQLELGNLLLLDCRSE---------------SSHIESAINVALPALMLRRLTGGNLP----VRALFPRSCDD   65 (343)
T ss_pred             HHHHHHHHhhcccCceEEEecCCc---------------cchhhhhhhhcchHHHHHHHhCCCCc----ceeccCCcccc
Confidence            467899999998889999999972               468888887655443211   01100    000000   00


Q ss_pred             CCC----CCCCEEEecCC--------cHHHHHHH---HHHHhcCCCCceeeeCcHHHHhCC
Q 020963          265 GIS----LEKPVVTACGT--------GVTACILA---LGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       265 ~~~----~~~~vivyC~~--------G~ra~~~~---~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      ...    +..++|.|+.+        |. ++..-   +.++..|+. ++.+.||+.....+
T Consensus        66 ~~~~~~c~~v~vilyD~~~~e~e~~~~~-~s~Lg~ll~kl~~~g~~-a~yL~ggF~~fq~e  124 (343)
T KOG1717|consen   66 KRFPARCGTVTVILYDESSAEWEEETGA-ESVLGLLLKKLKDEGCS-ARYLSGGFSKFQAE  124 (343)
T ss_pred             ccccccCCcceeeecccccccccccchh-hhHHHHHHHHHHhcCcc-hhhhhcccchhhhh
Confidence            111    23688999875        22 22222   335567876 88899999877664

>PLN02727 NAD kinase

Probab=82.75  E-value=5.2  Score=42.06  Aligned_cols=88  Identities=25%  Similarity=0.168  Sum_probs=46.8

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCC-CCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR-KGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~-~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      ..++++++..+.+.+=-.||+.|+..|-.+...... .+.+..- -.-+|+|...     ....+++++++..+-+.-..
T Consensus       267 gQpspe~la~LA~~GfKTIINLRpd~E~~q~~~~ee~eAae~~G-L~yVhIPVs~-----~~apt~EqVe~fa~~l~~sl  340 (986)
T PLN02727        267 GQVTEEGLKWLLEKGFKTIVDLRAEIVKDNFYQAAVDDAISSGK-IEVVKIPVEV-----RTAPSAEQVEKFASLVSDSS  340 (986)
T ss_pred             CCCCHHHHHHHHHCCCeEEEECCCCCcCCCchhHHHHHHHHHcC-CeEEEeecCC-----CCCCCHHHHHHHHHHHHhhc
Confidence            477889888877665567999999776211110000 0000000 1123444422     12234455555544331135


Q ss_pred             CCCEEEecCCcHHHH
Q 020963          269 EKPVVTACGTGVTAC  283 (319)
Q Consensus       269 ~~~vivyC~~G~ra~  283 (319)
                      .+||++||.+|.+.+
T Consensus       341 pkPVLvHCKSGarRA  355 (986)
T PLN02727        341 KKPIYLHSKEGVWRT  355 (986)
T ss_pred             CCCEEEECCCCCchH
Confidence            799999999998433

>smart00195 DSPc Dual specificity phosphatase, catalytic domain

Probab=82.46  E-value=4.1  Score=32.36  Aligned_cols=30  Identities=20%  Similarity=0.248  Sum_probs=21.4

Q ss_pred             CCCCCCEEEecCCcH-HHH--HHHHHHHhcCCC
Q 020963          266 ISLEKPVVTACGTGV-TAC--ILALGLNRLGKH  295 (319)
Q Consensus       266 ~~~~~~vivyC~~G~-ra~--~~~~~L~~~G~~  295 (319)
                      ...+++|+|+|..|. ||.  .+++++...|+.
T Consensus        75 ~~~~~~VlVHC~~G~~RS~~v~~~yl~~~~~~~  107 (138)
T smart00195       75 EKKGGKVLVHCQAGVSRSATLIIAYLMKYRNLS  107 (138)
T ss_pred             hcCCCeEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence            456789999999985 655  344556667764

>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases

Probab=81.88  E-value=4.6  Score=31.92  Aligned_cols=27  Identities=26%  Similarity=0.384  Sum_probs=18.6

Q ss_pred             CCCCEEEecCCcH-HHHH--HHHHHHhcCC
Q 020963          268 LEKPVVTACGTGV-TACI--LALGLNRLGK  294 (319)
Q Consensus       268 ~~~~vivyC~~G~-ra~~--~~~~L~~~G~  294 (319)
                      .+++|+|+|..|. ||..  +++++...|+
T Consensus        80 ~~~~vlVHC~~G~~Rs~~~~~~~l~~~~~~  109 (139)
T cd00127          80 KGGKVLVHCLAGVSRSATLVIAYLMKTLGL  109 (139)
T ss_pred             cCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence            4679999999986 6553  3445555555

Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	319
3olh_A	302	Human 3-Mercaptopyruvate Sulfurtransferase Length =		1e-60
1urh_A	280	The "rhodanese" Fold And Catalytic Mechanism Of 3-M		5e-56
1orb_A	296	Active Site Structural Features For Chemically Modi		4e-54
1boh_A	296	Sulfur-Substituted Rhodanese (Orthorhombic Form) Le		1e-52
1rhs_A	296	Sulfur-Substituted Rhodanese Length = 296		1e-52
1dp2_A	293	Crystal Structure Of The Complex Between Rhodanese		1e-52
1rhd_A	293	Structure Of Bovine Liver Rhodanese. I. Structure D		2e-52
3utn_X	327	Crystal Structure Of Tum1 Protein From Saccharomyce		1e-39
1uar_A	285	Crystal Structure Of Rhodanese From Thermus Thermop		3e-23
3hwi_A	298	Crystal Structure Of Probable Thiosulfate Sulfurtra		1e-21
3aax_A	277	Crystal Structure Of Probable Thiosulfate Sulfurtra		1e-21
3aay_A	277	Crystal Structure Of Probable Thiosulfate Sulfurtra		2e-20
1h4k_X	271	Sulfurtransferase From Azotobacter Vinelandii In Co		1e-19
1e0c_A	271	Sulfurtransferase From Azotobacter Vinelandii Lengt		2e-18
3hzu_A	318	Crystal Structure Of Probable Thiosulfate Sulfurtra		2e-17
3ipp_A	416	Crystal Structure Of Sulfur-Free Ynje Length = 416		2e-17
3ipo_A	416	Crystal Structure Of Ynje Length = 416		4e-16
2wlx_A	423	Putative Thiosulfate Sulfurtransferase Ynje Length		4e-16
3p3a_A	320	Crystal Structure Of A Putative Thiosulfate Sulfurt		1e-15
2wlr_A	423	Putative Thiosulfate Sulfurtransferase Ynje Length		1e-13
1okg_A	373	3-Mercaptopyruvate Sulfurtransferase From Leishmani		1e-09

>pdb|3OLH|A Chain A, Human 3-Mercaptopyruvate Sulfurtransferase Length = 302

Iteration: 1
 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 120/293 (40%), Positives = 162/293 (55%), Gaps = 27/293 (9%)
Query: 21  EPVVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 76
           + +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +D
Sbjct: 21  QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSD 80
Query: 77  RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWV 134
           RT+   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +
Sbjct: 81  RTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSL 140
Query: 135 LDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTL 194
           LDGGL  W      + S  S  A                     P  F+ +  P  I T 
Sbjct: 141 LDGGLRHWLRQNLPLSSGKSQPA---------------------PAEFRAQLDPAFIKTY 179
Query: 195 EQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPA 254
           E +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         
Sbjct: 180 EDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSP 239
Query: 255 DELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
           +E++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV +YDGSW EW
Sbjct: 240 EEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEW 292

>pdb|1URH|A Chain A, The "rhodanese" Fold And Catalytic Mechanism Of 3-Mercaptopyruvate Sulfotransferases: Crystal Structure Of Ssea From Escherichia Coli Length = 280

Iteration: 1
 Score =  214 bits (545), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 114/294 (38%), Positives = 165/294 (56%), Gaps = 23/294 (7%)
Query: 24  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 82
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 6   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 65
Query: 83  HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 142
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 66  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 125
Query: 143 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 202
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 126 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 164
Query: 203 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 262
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 165 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 223
Query: 263 QEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 316
             G+S +KP++ + G+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE
Sbjct: 224 GRGVSYDKPIIVSXGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 277

>pdb|1ORB|A Chain A, Active Site Structural Features For Chemically Modified Forms Of Rhodanese Length = 296

Iteration: 1
 Score =  207 bits (528), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/300 (41%), Positives = 159/300 (53%), Gaps = 31/300 (10%)
Query: 23  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 136
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPDT 313
           EL+  FE + + L KP++  C  GVTAC +AL     GK DVA+YDGSW EW   A P+T
Sbjct: 227 ELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPET 286

>pdb|1BOH|A Chain A, Sulfur-Substituted Rhodanese (Orthorhombic Form) Length = 296

Iteration: 1
 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 158/300 (52%), Gaps = 31/300 (10%)
Query: 23  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 136
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPDT 313
           EL+  FE + + L KP++     GVTAC +AL     GK DVA+YDGSW EW   A P+T
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPET 286

>pdb|1RHS|A Chain A, Sulfur-Substituted Rhodanese Length = 296

Iteration: 1
 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 158/300 (52%), Gaps = 31/300 (10%)
Query: 23  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 136
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPDT 313
           EL+  FE + + L KP++     GVTAC +AL     GK DVA+YDGSW EW   A P+T
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPET 286

>pdb|1DP2|A Chain A, Crystal Structure Of The Complex Between Rhodanese And Lipoate Length = 293

Iteration: 1
 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 158/300 (52%), Gaps = 31/300 (10%)
Query: 23  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 136
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPDT 313
           EL+  FE + + L KP++     GVTAC +AL     GK DVA+YDGSW EW   A P+T
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPET 286

>pdb|1RHD|A Chain A, Structure Of Bovine Liver Rhodanese. I. Structure Determination At 2.5 Angstroms Resolution And A Comparison Of The Conformation And Sequence Of Its Two Domains Length = 293

Iteration: 1
 Score =  202 bits (513), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/300 (40%), Positives = 159/300 (53%), Gaps = 31/300 (10%)
Query: 23  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 136
           +    MLPSE  FA  V +LG+ N   +VVY+G   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYNGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L  +      +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMDFLTENGFEKSPE 226
Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW--GAQPDT 313
           EL+  FE + + L KP++     GVTAC +AL     GK DVA+YDGSW EW   A P+T
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPET 286

>pdb|3UTN|X Chain X, Crystal Structure Of Tum1 Protein From Saccharomyces Cerevisiae Length = 327

Iteration: 1
 Score =  159 bits (403), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 148/276 (53%), Gaps = 21/276 (7%)
Query: 41  LDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 99
           +DA+WY+P  +  N         IP ++FFD+D ++D+ +  PHM P+++ F  A+S LG
Sbjct: 50  VDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSNLG 109
Query: 100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAIL 159
           ++  D LVVYD  G FS+ R  W   V GH +V++L+    ++R   Y ++SS       
Sbjct: 110 VQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLN-NFNQYREFKYPLDSSKVAAFSP 168
Query: 160 KASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDG 219
              +  E+ E     ++V    ++  FQ  L+ + E  K+      +   DARS  RF+G
Sbjct: 169 YPKSHYESSESFQDKEIVD---YEEMFQ--LVKSGELAKK------FNAFDARSLGRFEG 217
Query: 220 DAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP-ADE-----LKKRFEQEGISLE--KP 271
             PEPR  I SGH+PG++ +P+  +LD      P A E     L+K  +    +L+  KP
Sbjct: 218 TEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKALKDFHCTLDPSKP 277
Query: 272 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
            + +CGTGV+  I+   L   G  +V +YDGSWTEW
Sbjct: 278 TICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEW 313

>pdb|1UAR|A Chain A, Crystal Structure Of Rhodanese From Thermus Thermophilus Hb8 Length = 285

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 135/301 (44%), Gaps = 33/301 (10%)
Query: 21  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
           E +VS DW+  +L +P ++VL+      DE       Y   HIPGA    +D   D    
Sbjct: 7   EVLVSTDWVQEHLEDPKVRVLEV-----DED---ILLYDTGHIPGAQ--KIDWQRDFWDP 56
Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
           +     SEE FA     LG+ N   +V+Y  K  + AA  +W F+  GH  V + +GG  
Sbjct: 57  VVRDFISEEEFAKLXERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLXNGGRQ 116
Query: 141 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 200
           +W   G  + +          S      E  Y+ + +    ++     H+I         
Sbjct: 117 KWVEEGRPLTTEV-------PSYPPGRYEVPYRDESI--RAYRDDVLEHII--------K 159
Query: 201 IEEGTYQLVDARSKARFDGDAPE----PRKG-IRSGHVPGSKCIPFPQMLDASQTLLPAD 255
           ++EG   LVD RS   + G+       P++G +R+GH+PG+K IP+ + ++   T   A+
Sbjct: 160 VKEGKGALVDVRSPQEYRGELTHXPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAE 219
Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTP 314
           EL+  +E  GI+ +K +V        +      L   LG   V  YDGSWTEWG     P
Sbjct: 220 ELRALYEPLGITKDKDIVVYXRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVP 279
Query: 315 V 315
           +
Sbjct: 280 I 280

>pdb|3HWI|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa2 (Rhodanese-Like Protein) From Mycobacterium Tuberculosis Length = 298

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 38/310 (12%)
Query: 16  SVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVA 75
           S++  + +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   
Sbjct: 21  SMARCDVLVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRT 70
Query: 76  DRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVL 135
           D    +       + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +L
Sbjct: 71  DLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLL 130
Query: 136 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 195
           DGG  +W   G  + S      +   +A+              P      F+  ++  + 
Sbjct: 131 DGGRKKWELDGRPLSSDPVSRPVTSYTASP-------------PDNTIRAFRDEVLAAI- 176
Query: 196 QVKRNIEEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQT 250
               N++     L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T
Sbjct: 177 ----NVK----NLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGT 228
Query: 251 LLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGA 309
               +EL K +   G+   K  +  C  G  +      L   LG  +V  YDGSWTE+G+
Sbjct: 229 FKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGS 288
Query: 310 QPDTPVETSS 319
               P+E  S
Sbjct: 289 LVGAPIELGS 298

>pdb|3AAX|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium Tuberculosis: Monoclinic Form Length = 277

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 23  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 82
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 7   LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 83  HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 142
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 57  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 143 RASGYDVESSASGDAILKASAA-SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNI 201
              G  + S      +   +A+  +   + ++ +V+     +                  
Sbjct: 117 ELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN----------------- 159
Query: 202 EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 256
                 L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    +E
Sbjct: 160 ------LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEE 213
Query: 257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPV 315
           L K +   G+   K  +  C  G  +      L   LG  +V  YDGSWTE+G+    P+
Sbjct: 214 LAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPI 273
Query: 316 ETSS 319
           E  S
Sbjct: 274 ELGS 277

>pdb|3AAY|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium Tuberculosis: Orthorhombic Form Length = 277

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 40/304 (13%)
Query: 23  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 82
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 7   LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 83  HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 142
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 57  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 143 RASGYDVESSASGDAILKASAA-SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNI 201
              G  + S      +   +A+  +   + ++ +V+     +                  
Sbjct: 117 ELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN----------------- 159
Query: 202 EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 256
                 L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    +E
Sbjct: 160 ------LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEE 213
Query: 257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPV 315
           L K +   G+   K  +     G  +      L   LG  +V  YDGSWTE+G+    P+
Sbjct: 214 LAKLYADAGLDNSKETIAYXRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPI 273
Query: 316 ETSS 319
           E  S
Sbjct: 274 ELGS 277

>pdb|1H4K|X Chain X, Sulfurtransferase From Azotobacter Vinelandii In Complex With Hypophosphite Length = 271

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 114/288 (39%), Gaps = 33/288 (11%)
Query: 29  LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 88
           L A L  P+L ++D +             Y   HIPGA F D           P + P  
Sbjct: 16  LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 89  EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 148
           E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL  W A    
Sbjct: 67  EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126
Query: 149 VESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQL 208
           +         L A A              GP       +P    + + +   +      +
Sbjct: 127 LSRE------LPAPAG-------------GPVALSLHDEP--TASRDYLLGRLGAADLAI 165
Query: 209 VDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL 268
            DARS   + G+     KG   GH+PG+    +   +D S+ L    ++  R E+ GI+ 
Sbjct: 166 WDARSPQEYRGEKVLAAKG---GHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITP 222
Query: 269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 316
           +K +VT C T   + +  L    LG   V  Y GSW EWG  PDTPVE
Sbjct: 223 DKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270

>pdb|1E0C|A Chain A, Sulfurtransferase From Azotobacter Vinelandii Length = 271

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 113/288 (39%), Gaps = 33/288 (11%)
Query: 29  LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 88
           L A L  P+L ++D +             Y   HIPGA F D           P + P  
Sbjct: 16  LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 89  EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 148
           E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL  W A    
Sbjct: 67  EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126
Query: 149 VESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQL 208
           +         L A A              GP       +P    + + +   +      +
Sbjct: 127 LSRE------LPAPAG-------------GPVALSLHDEP--TASRDYLLGRLGAADLAI 165
Query: 209 VDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL 268
            DARS   + G+     KG   GH+PG+    +   +D S+ L    ++  R E+ GI+ 
Sbjct: 166 WDARSPQEYRGEKVLAAKG---GHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITP 222
Query: 269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 316
           +K +VT   T   + +  L    LG   V  Y GSW EWG  PDTPVE
Sbjct: 223 DKEIVTHXQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270

>pdb|3HZU|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Ssea (Rhodanese) From Mycobacterium Tuberculosis Length = 318

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 134/307 (43%), Gaps = 51/307 (16%)
Query: 21  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
           E +V+ DWL A++  P L ++++     DE       Y V HIPGA+   +D   D    
Sbjct: 39  ERLVTADWLSAHMGAPGLAIVES-----DED---VLLYDVGHIPGAV--KIDWHTDLNDP 88
Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
                 + E FA  +   G+   D +V+Y  K  + AA   W+F +FGH  V +L+GG  
Sbjct: 89  RVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRD 148
Query: 141 RW----RASGYDVES-SASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 195
            W    R +  DV + + +G  +++    ++A  + ++  V+                  
Sbjct: 149 LWLAERRETTLDVPTKTCTGYPVVQ---RNDAPIRAFRDDVLAIL--------------- 190
Query: 196 QVKRNIEEGTYQLVDARSKARFDG------DAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 249
                   G   L+D RS   + G      D PE    +R+GH+P +  IP+ +  D S 
Sbjct: 191 --------GAQPLIDVRSPEEYTGKRTHMPDYPE-EGALRAGHIPTAVHIPWGKAADESG 241
Query: 250 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWG 308
                +EL++ ++   I+ +   V  C  G  +      L   LGK DV  YDGSWTEWG
Sbjct: 242 RFRSREELERLYDF--INPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWG 299
Query: 309 AQPDTPV 315
                P+
Sbjct: 300 NAVRVPI 306

>pdb|3IPP|A Chain A, Crystal Structure Of Sulfur-Free Ynje Length = 416

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 135/316 (42%), Gaps = 51/316 (16%)
Query: 21  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 71
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 124 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 175
Query: 72  DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 131
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 176 NEV--ESEPLWNKV-SDEQLKAMLAKHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKD 231
Query: 132 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 189
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 232 VRLLDGGWQTWSDAGLPVERGTPP-------------------KVKAEPDFGVKIPAQPQ 272
Query: 190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 241
           L+  +EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 273 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHM 331
Query: 242 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 301
               +   T+  AD++   ++   I  E+ V   CGTG  A    +    +G  +V+VYD
Sbjct: 332 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYD 391
Query: 302 GSWTEWGAQPDTPVET 317
           G W EW + P  PV T
Sbjct: 392 GGWYEWSSDPKNPVAT 407

>pdb|3IPO|A Chain A, Crystal Structure Of Ynje Length = 416

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 41/291 (14%)
Query: 37  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 96
           D KV++A+W  P       + Y ++HIPGA + D + V   +  L + + S+E   A ++
Sbjct: 148 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAMLA 197
Query: 97  ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 156
             G+ +   +++Y G+ +++AARV  +    G   V +LDGG   W  +G  VE      
Sbjct: 198 KHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPP- 255
Query: 157 AILKASAASEAIEKVYQGQVVGPTTFQTKF--QPHLIWTLEQVKRNIEEGTYQLVDARSK 214
                             +V     F  K   QP L+  +EQ +  +      LV  RS 
Sbjct: 256 ------------------KVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSW 297
Query: 215 ARFDGDAP-----EPR---KGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI 266
             F G        +P+    G R GH  GS         +   T+  AD++   ++   I
Sbjct: 298 PEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHMEDFHNPDGTMRSADDITAMWKAWNI 356
Query: 267 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 317
             E+ V    GTG  A    +    +G  +V+VYDG W EW + P  PV T
Sbjct: 357 KPEQQVSFYXGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVAT 407

>pdb|2WLX|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje Length = 423

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 134/316 (42%), Gaps = 51/316 (16%)
Query: 21  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 71
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 123 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 174
Query: 72  DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 131
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 175 NEV--ESEPLWNKV-SDEQLKAMLAKHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKD 230
Query: 132 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 189
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 231 VRLLDGGWQTWSDAGLPVERGTPP-------------------KVKAEPDFGVKIPAQPQ 271
Query: 190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 241
           L+  +EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHM 330
Query: 242 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYD 301
               +   T+  AD++   ++   I  E+ V    GTG  A    +    +G  +V+VYD
Sbjct: 331 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYXGTGWRASETFMYARAMGWKNVSVYD 390
Query: 302 GSWTEWGAQPDTPVET 317
           G W EW + P  PV T
Sbjct: 391 GGWYEWSSDPKNPVAT 406

>pdb|3P3A|A Chain A, Crystal Structure Of A Putative Thiosulfate Sulfurtransferase From Mycobacterium Thermoresistible Length = 320

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 126/307 (41%), Gaps = 51/307 (16%)
Query: 21  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
           E +V+ DWL +NL  P L ++++     DE       Y   HIPGA+   +D   D    
Sbjct: 40  ERLVTADWLASNLGRPGLVIVES-----DED---VLLYDTGHIPGAV--KIDWHTDLNDP 89
Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
                 + E FAA +   G+   D +V+Y  K  + AA   W+F +FGH  V +LDGG  
Sbjct: 90  AVRDYINGEQFAALMDRKGVTRDDTVVIYGDKSNWWAAYAMWVFHLFGHPDVRLLDGGRD 149
Query: 141 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 200
            W ++G D                     +V   Q  G    +    P   +  + V R 
Sbjct: 150 LWVSTGRDTTL------------------EVPTRQTSGYPVVERNDAPIRAFK-DDVLRV 190
Query: 201 IEEGTYQLVDARSKARFDG------DAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPA 254
           +  G   L+D RS   + G      D PE    +R GH+P +  +P+      S+     
Sbjct: 191 L--GKEPLIDVRSPQEYTGERTHMPDYPE-EGALRGGHIPTAVSVPW------SKAAYDD 241
Query: 255 DELKKRFEQEGI-----SLEKPVVTACGTGVTACILALGLNRLGKH-DVAVYDGSWTEWG 308
              + R E E I       +KP+V  C  G  +      L  L  H +V  YDGSWTEWG
Sbjct: 242 GRFRARAELEEIYGFVKPDDKPIVY-CRIGERSSHTWFVLTYLLGHPNVRNYDGSWTEWG 300
Query: 309 AQPDTPV 315
                P+
Sbjct: 301 NAVRVPI 307

>pdb|2WLR|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje Length = 423

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 119/291 (40%), Gaps = 41/291 (14%)
Query: 37  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 96
           D KV++A+W  P       + Y ++HIPGA + D + V   +  L + + S+E   A ++
Sbjct: 147 DWKVIEAAWGAP-------KLYLISHIPGADYIDTNEV--ESEPLWNKV-SDEQLKAXLA 196
Query: 97  ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 156
             G+ +   +++Y G+ +++AARV  +    G   V +LDGG   W  +G  VE      
Sbjct: 197 KHGIRHDTTVILY-GRDVYAAARVAQIXLYAGVKDVRLLDGGWQTWSDAGLPVERGTPP- 254
Query: 157 AILKASAASEAIEKVYQGQVVGPTTFQTKF--QPHLIWTLEQVKRNIEEGTYQLVDARSK 214
                             +V     F  K   QP L    EQ +  +      LV  RS 
Sbjct: 255 ------------------KVKAEPDFGVKIPAQPQLXLDXEQARGLLHRQDASLVSIRSW 296
Query: 215 ARFDGDAP-----EPR---KGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI 266
             F G        +P+    G R GH  GS         +   T   AD++   ++   I
Sbjct: 297 PEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHXEDFHNPDGTXRSADDITAXWKAWNI 355
Query: 267 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 317
             E+ V    GTG  A          G  +V+VYDG W EW + P  PV T
Sbjct: 356 KPEQQVSFYXGTGWRASETFXYARAXGWKNVSVYDGGWYEWSSDPKNPVAT 406

>pdb|1OKG|A Chain A, 3-Mercaptopyruvate Sulfurtransferase From Leishmania Major Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 118/299 (39%), Gaps = 47/299 (15%)
Query: 37  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR---TTNLPHMLPSEEAFAA 93
           + +++D  + +  +     Q Y   H+  A+  DVD    +   T+   H LP    F  
Sbjct: 27  EYRIVDCRYSLKIKDHGSIQ-YAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFID 85
Query: 94  AVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS 152
              A G   +  ++ YD + G     R+WW     G D  +V++GG    +A+G + ES 
Sbjct: 86  WCXANGXAGELPVLCYDDECGAXGGCRLWWXLNSLGAD-AYVINGGFQACKAAGLEXESG 144
Query: 153 ASGDAILKASAASEAIEKVYQGQVVGPTT---FQTKFQPHLIWTLEQVKRNIEEGTYQ-- 207
                                  +  P T   F+T FQ H +         ++E   Q  
Sbjct: 145 EPS-------------------SLPRPATHWPFKTAFQHHYL---------VDEIPPQAI 176
Query: 208 LVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA---SQTLLPADELKKRF--- 261
           + DARS  RF             GH+ G++ +P+   L      + L   +E++      
Sbjct: 177 ITDARSADRFASTVRPYAADKXPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIXTV 236
Query: 262 -EQEGISLE-KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS 318
            +  G + +    V + G+GVTACI    ++ LG     +Y GSW+E+      P+  S
Sbjct: 237 VQGAGDAADLSSFVFSXGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIXRS 295

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	1e-155
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	1e-152
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	1e-149
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	1e-127
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	1e-126
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	1e-125
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	1e-125
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	1e-119
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	1e-115
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	7e-22
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	1e-82
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	2e-19
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	2e-14
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	2e-12
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	6e-09
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	7e-09
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	2e-16
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	2e-06
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	2e-08
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	1e-05
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	3e-08
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	2e-05
3r2u_A	466	Metallo-beta-lactamase family protein; structural	6e-08
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	2e-07
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	6e-06
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	5e-07
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	3e-06
1tq1_A	129	AT5G66040, senescence-associated family protein; C	7e-07
1tq1_A	129	AT5G66040, senescence-associated family protein; C	8e-05
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	7e-07
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	1e-06
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	2e-05
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	2e-06
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	3e-06
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	9e-06
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	3e-06
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	4e-06
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	5e-06
2jtq_A	85	Phage shock protein E; solution structure rhodanes	1e-05
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	2e-05
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	4e-05
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	1e-04
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	2e-04
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	3e-04
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	3e-04
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	7e-04
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	7e-04

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 Length = 280

 Score =  433 bits (1116), Expect = e-155
 Identities = 112/297 (37%), Positives = 163/297 (54%), Gaps = 23/297 (7%)

Query: 22  PVVSVDWLHANLREPDLKVLDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
             V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ 
Sbjct: 4   WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSP 63

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
           LPHMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL 
Sbjct: 64  LPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLA 123

Query: 141 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 200
            W+     +E  A                       +    F   F P  +  +  V   
Sbjct: 124 GWQRDDLLLEEGAV---------------------ELPEGEFNAAFNPEAVVKVTDVLLA 162

Query: 201 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR 260
             E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++     L   DEL   
Sbjct: 163 SHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDAI 221

Query: 261 FEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 317
           F   G+S +KP++ +CG+GVTA ++ L L  L   +V +YDG+W+EWGA+ D PVE 
Sbjct: 222 FFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP 278

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens} Length = 302

 Score =  428 bits (1102), Expect = e-152
 Identities = 121/302 (40%), Positives = 165/302 (54%), Gaps = 29/302 (9%)

Query: 22  PVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 77
            +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DR
Sbjct: 22  SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDR 81

Query: 78  TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVL 135
           T+   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +L
Sbjct: 82  TSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLL 141

Query: 136 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 195
           DGGL  W      + S  S                        P  F+ +  P  I T E
Sbjct: 142 DGGLRHWLRQNLPLSSGKS---------------------QPAPAEFRAQLDPAFIKTYE 180

Query: 196 QVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPAD 255
            +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         +
Sbjct: 181 DIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPE 240

Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG--AQPDT 313
           E++  F+++ + L KP+V  CG+GVTAC +ALG    GK DV +YDGSW EW   A+P+ 
Sbjct: 241 EIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPED 300

Query: 314 PV 315
            +
Sbjct: 301 VI 302

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A Length = 296

 Score =  420 bits (1081), Expect = e-149
 Identities = 125/305 (40%), Positives = 160/305 (52%), Gaps = 31/305 (10%)

Query: 22  PVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 77
            +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+
Sbjct: 8   ALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDK 66

Query: 78  TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVL 135
            +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL
Sbjct: 67  ASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVL 126

Query: 136 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 195
           +GG   W   G+ V S  S                        P  F+      L+ T E
Sbjct: 127 NGGFRNWLKEGHPVTSEPS---------------------RPEPAIFKATLNRSLLKTYE 165

Query: 196 QVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPA 254
           QV  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         
Sbjct: 166 QVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSP 225

Query: 255 DELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG--AQPD 312
           +EL+  FE + + L KP++  C  GVTAC +AL     GK DVA+YDGSW EW   A P+
Sbjct: 226 EELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPE 285

Query: 313 TPVET 317
           T V  
Sbjct: 286 TWVSQ 290

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A Length = 277

 Score =  363 bits (933), Expect = e-127
 Identities = 75/306 (24%), Positives = 123/306 (40%), Gaps = 40/306 (13%)

Query: 21  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
           + +VS DW  +NL  P +  ++               Y   HI GA+  D     D    
Sbjct: 5   DVLVSADWAESNLHAPKVVFVEVDEDTS--------AYDRDHIAGAIKLDWR--TDLQDP 54

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
           +       + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  
Sbjct: 55  VKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRK 114

Query: 141 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLI-WTLEQVKR 199
           +W   G  + S                            T++      + I    ++V  
Sbjct: 115 KWELDGRPLSSDPV---------------------SRPVTSYTASPPDNTIRAFRDEVLA 153

Query: 200 NIEEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPA 254
            I      L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    
Sbjct: 154 AI--NVKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSD 211

Query: 255 DELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDT 313
           +EL K +   G+   K  +  C  G  +      L   LG  +V  YDGSWTE+G+    
Sbjct: 212 EELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGA 271

Query: 314 PVETSS 319
           P+E  S
Sbjct: 272 PIELGS 277

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 Length = 373

 Score =  363 bits (934), Expect = e-126
 Identities = 64/318 (20%), Positives = 115/318 (36%), Gaps = 39/318 (12%)

Query: 13  STLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD 72
           +     P +  +    +  +L   + +++D  + +   + +   +Y   H+  A+  DVD
Sbjct: 5   AAAPKHPGKVFLDPSEVADHL--AEYRIVDCRYSLKI-KDHGSIQYAKEHVKSAIRADVD 61

Query: 73  GVADR---TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFG 128
               +   T+   H LP    F     A G+  +  ++ YD + G     R+WWM    G
Sbjct: 62  TNLSKLVPTSTARHPLPPXAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLG 121

Query: 129 HDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQP 188
            D  +V++GG    +A+G ++ES                                    P
Sbjct: 122 AD-AYVINGGFQACKAAGLEMESG-----------------------EPSSLPRPATHWP 157

Query: 189 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS 248
                      +       + DARS  RF             GH+ G++ +P+   L   
Sbjct: 158 FKTAFQHHYLVDEIPPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTR 217

Query: 249 ---QTLLPADELKKRFEQ-----EGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVY 300
              + L   +E++             +     V +CG+GVTACI    ++ LG     +Y
Sbjct: 218 GDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLY 277

Query: 301 DGSWTEWGAQPDTPVETS 318
            GSW+E+      P+  S
Sbjct: 278 CGSWSEYSGLFRPPIMRS 295

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Length = 271

 Score =  358 bits (922), Expect = e-125
 Identities = 75/296 (25%), Positives = 108/296 (36%), Gaps = 33/296 (11%)

Query: 21  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
             V+    L A L  P+L ++D +             Y   HIPGA F D          
Sbjct: 8   PLVIEPADLQARLSAPELILVDLTSA---------ARYAEGHIPGARFVDPKRTQLGQPP 58

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
            P + P  E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL 
Sbjct: 59  APGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLT 118

Query: 141 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 200
            W A    +                                           + + +   
Sbjct: 119 AWLAEDRPLSRELP---------------------APAGGPVALSLHDEPTASRDYLLGR 157

Query: 201 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR 260
           +      + DARS   + G+        + GH+PG+    +   +D S+ L    ++  R
Sbjct: 158 LGAADLAIWDARSPQEYRGEKVLAA---KGGHIPGAVNFEWTAAMDPSRALRIRTDIAGR 214

Query: 261 FEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 316
            E+ GI+ +K +VT C T   + +  L    LG   V  Y GSW EWG  PDTPVE
Sbjct: 215 LEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Length = 285

 Score =  358 bits (922), Expect = e-125
 Identities = 83/307 (27%), Positives = 132/307 (42%), Gaps = 41/307 (13%)

Query: 21  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
           E +VS DW+  +L +P ++VL+               Y   HIPGA   D     D    
Sbjct: 7   EVLVSTDWVQEHLEDPKVRVLEVDE--------DILLYDTGHIPGAQKIDWQ--RDFWDP 56

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
           +     SEE FA  +  LG+ N   +V+Y  K  + AA  +W F+  GH  V +++GG  
Sbjct: 57  VVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQ 116

Query: 141 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLI----WTLEQ 196
           +W   G  + +                           P  ++  ++   I      + +
Sbjct: 117 KWVEEGRPLTTEVP---------------------SYPPGRYEVPYRDESIRAYRDDVLE 155

Query: 197 VKRNIEEGTYQLVDARSKARFDGD----APEPRKG-IRSGHVPGSKCIPFPQMLDASQTL 251
               ++EG   LVD RS   + G+       P++G +R+GH+PG+K IP+ + ++   T 
Sbjct: 156 HIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTF 215

Query: 252 LPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQ 310
             A+EL+  +E  GI+ +K +V  C     +      L   LG   V  YDGSWTEWG  
Sbjct: 216 KSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNL 275

Query: 311 PDTPVET 317
              P+  
Sbjct: 276 VGVPIAK 282

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A Length = 318

 Score =  345 bits (886), Expect = e-119
 Identities = 76/322 (23%), Positives = 120/322 (37%), Gaps = 39/322 (12%)

Query: 2   SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 61
            S+        +  + +  E +V+ DWL A++  P L ++++              Y V 
Sbjct: 20  GSMPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESDE--------DVLLYDVG 71

Query: 62  HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 121
           HIPGA+  D     D          + E FA  +   G+   D +V+Y  K  + AA   
Sbjct: 72  HIPGAVKIDWH--TDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYAL 129

Query: 122 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 181
           W+F +FGH  V +L+GG   W A   +                               T 
Sbjct: 130 WVFTLFGHADVRLLNGGRDLWLAERRETTLDVP---------------------TKTCTG 168

Query: 182 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGS 236
           +    +        +       G   L+D RS   + G             +R+GH+P +
Sbjct: 169 YPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTA 228

Query: 237 KCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKH 295
             IP+ +  D S      +EL++ +  + I+ +   V  C  G  +      L   LGK 
Sbjct: 229 VHIPWGKAADESGRFRSREELERLY--DFINPDDQTVVYCRIGERSSHTWFVLTHLLGKA 286

Query: 296 DVAVYDGSWTEWGAQPDTPVET 317
           DV  YDGSWTEWG     P+  
Sbjct: 287 DVRNYDGSWTEWGNAVRVPIVA 308

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score =  337 bits (866), Expect = e-115
 Identities = 78/331 (23%), Positives = 123/331 (37%), Gaps = 43/331 (12%)

Query: 2   SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREP--------DLKVLDASWYMPDEQRN 53
           S L+           +   E +V   WLH   +          D KV++A+W  P     
Sbjct: 104 SILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAP----- 158

Query: 54  PFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG 113
             + Y ++HIPGA + D + V            S+E   A ++  G+ +   +++Y    
Sbjct: 159 --KLYLISHIPGADYIDTNEVES---EPLWNKVSDEQLKAMLAKHGIRHDTTVILYGR-D 212

Query: 114 IFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ 173
           +++AARV  +    G   V +LDGG   W  +G  VE                       
Sbjct: 213 VYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV---------------- 256

Query: 174 GQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHV 233
            +       +   QP L+  +EQ +  +      LV  RS   F G           G +
Sbjct: 257 -KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEI 315

Query: 234 PG-------SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILA 286
            G       S         +   T+  AD++   ++   I  E+ V   CGTG  A    
Sbjct: 316 AGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETF 375

Query: 287 LGLNRLGKHDVAVYDGSWTEWGAQPDTPVET 317
           +    +G  +V+VYDG W EW + P  PV T
Sbjct: 376 MYARAMGWKNVSVYDGGWYEWSSDPKNPVAT 406

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score = 94.4 bits (235), Expect = 7e-22
 Identities = 41/302 (13%), Positives = 74/302 (24%), Gaps = 65/302 (21%)

Query: 24  VSVDWLHANLREPDLKVLDA-------SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 76
           ++       L++ + K +D         W       +        H   AL         
Sbjct: 6   LAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPS-------GHELAALNLSAS---- 54

Query: 77  RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 136
                     S E   A +    L+    + +Y          V    +  G   + +L 
Sbjct: 55  -----WLDKMSTEQLNAWIKQHNLKTDAPVALYGNDK--DVDAVKTRLQKAGLTHISILS 107

Query: 137 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 196
             L                                        +  Q       +   + 
Sbjct: 108 DALSEP-------------------------------------SRLQKLPHFEQLVYPQW 130

Query: 197 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ-TLLPAD 255
           +    +        A      +     P K     H+PG+  I   ++        +  +
Sbjct: 131 LHDLQQGKEVTAKPAGDWKVIEAAWGAP-KLYLISHIPGADYIDTNEVESEPLWNKVSDE 189

Query: 256 ELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV 315
           +LK    + GI  +  V+        A  +A  +   G  DV + DG W  W      PV
Sbjct: 190 QLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDA-GLPV 248

Query: 316 ET 317
           E 
Sbjct: 249 ER 250

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A Length = 230

 Score =  248 bits (635), Expect = 1e-82
 Identities = 55/280 (19%), Positives = 84/280 (30%), Gaps = 56/280 (20%)

Query: 37  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 96
           D  ++D           P   Y+  H+PGA   D+     R      +   E        
Sbjct: 6   DAVLVDTR---------PRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQ 56

Query: 97  ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 156
            LGL     +V+YD        R  +   + G + V +   G   +     + +      
Sbjct: 57  TLGLR--SPVVLYDEGLTSRLCRTAFFLGLGGLE-VQLWTEGWEPYATEKEEPK------ 107

Query: 157 AILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 216
                                  T    K +   + T ++  R+       L+D RS   
Sbjct: 108 --------------------PERTEVVAKLRRDWLLTADEAARHP-----LLLDVRSPEE 142

Query: 217 FDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTAC 276
           F G    P    R G +PGSK  P    L                E+ G+   + V   C
Sbjct: 143 FQGKVHPPC-CPRGGRIPGSKNAPLELFLSPEG----------LLERLGLQPGQEVGVYC 191

Query: 277 GTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 316
            +G  + +    L  LG      Y GS  EW  +   P E
Sbjct: 192 HSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQE-GLPTE 229

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 87.5 bits (216), Expect = 2e-19
 Identities = 49/288 (17%), Positives = 77/288 (26%), Gaps = 71/288 (24%)

Query: 22  PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
            V +   + A L    +L +LD         R     +  AH   A             N
Sbjct: 7   AVRTFHDIRAALLARRELALLDV--------REE-DPFAQAHPLFAA------------N 45

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
           LP            + A        + VYD     +           G+  V +LDGGL 
Sbjct: 46  LPL-----SRLELEIHARVPRRDTPITVYDDGEGLAP-VAAQRLHDLGYSDVALLDGGLS 99

Query: 141 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 200
            WR +G ++      D  + + A  E +E       +     Q                 
Sbjct: 100 GWRNAGGELFR----DVNVPSKAFGELVEAERHTPSLAAEEVQALLD------------- 142

Query: 201 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR 260
                  ++DAR    +           ++  +PG   +P               EL  R
Sbjct: 143 -ARAEAVILDARRFDEY-----------QTMSIPGGISVPG-------------AELVLR 177

Query: 261 FEQEGISLEKPVVTACGTGVTACILALGLNRLG-KHDVAVYDGSWTEW 307
             +        V+  C     + I    L   G  + VA        W
Sbjct: 178 VAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGW 225

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 72.8 bits (178), Expect = 2e-14
 Identities = 36/267 (13%), Positives = 69/267 (25%), Gaps = 77/267 (28%)

Query: 52  RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG 111
           R P  EY+  H+PG+                   P  +          +     LV+ D 
Sbjct: 289 RTPE-EYEAGHLPGSRS----------------TPGGQLVQETDHVASVRGAR-LVLVDD 330

Query: 112 KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKV 171
            G+ +     W+ ++ G     +       +   G                         
Sbjct: 331 DGVRANMSASWLAQM-GWQVAVLDGLSEADFSERGA------------------------ 365

Query: 172 YQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSG 231
                   +    +           +   + E   +++D  + A +              
Sbjct: 366 -------WSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANY-----------AKR 407

Query: 232 HVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR 291
           H+PG+  +   Q+  A + L                  +  V  CG+ + A      +  
Sbjct: 408 HIPGAAWVLRSQLKQALERLGT---------------AERYVLTCGSSLLARFAVAEVQA 452

Query: 292 LGKHDVAVYDGSWTEWGAQPDTPVETS 318
           L    V + DG  + W A    P E  
Sbjct: 453 LSGKPVFLLDGGTSAWVAA-GLPTEDG 478

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 67.1 bits (163), Expect = 2e-12
 Identities = 45/295 (15%), Positives = 87/295 (29%), Gaps = 63/295 (21%)

Query: 21  EPVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 79
            P ++ + + A L    +  +LDA           F EYQ   IPG +      +  R  
Sbjct: 129 TPSLAAEEVQALLDARAEAVILDA---------RRFDEYQTMSIPGGISVPGAELVLRVA 179

Query: 80  NLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 138
            L                    +    ++V       S      +      + V  L  G
Sbjct: 180 ELA------------------PDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNG 221

Query: 139 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 198
              W  +G  +E   +      +    +A  +  +           +     +  L  + 
Sbjct: 222 TIGWTLAGQQLEHGQTRRFGAISQDTRKAAAQRAR-------AVADRAGVERL-DLAGLA 273

Query: 199 RNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 256
           +  +E   T  L+D R+   +            +GH+PGS+  P               +
Sbjct: 274 QWQDEHDRTTYLLDVRTPEEY-----------EAGHLPGSRSTPG-------------GQ 309

Query: 257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP 311
           L +  +         +V     GV A + A  L ++G     +   S  ++  + 
Sbjct: 310 LVQETDHVASVRGARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSEADFSERG 364

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 55.9 bits (134), Expect = 6e-09
 Identities = 27/136 (19%), Positives = 35/136 (25%), Gaps = 29/136 (21%)

Query: 22  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 81
             +    L   L EP  +VLD               Y   HIPGA +     +      L
Sbjct: 377 DTIDPTTLADWLGEPGTRVLDF--------TAS-ANYAKRHIPGAAWVLRSQLKQALERL 427

Query: 82  PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 141
                                     V        A       +      V++LDGG   
Sbjct: 428 G--------------------TAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSA 467

Query: 142 WRASGYDVESSASGDA 157
           W A+G   E   S  A
Sbjct: 468 WVAAGLPTEDGESLLA 483

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 55.9 bits (134), Expect = 7e-09
 Identities = 20/118 (16%), Positives = 34/118 (28%), Gaps = 25/118 (21%)

Query: 193 TLEQVKRNIEEGT-YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTL 251
           T   ++  +       L+D R +  F              H   +  +P           
Sbjct: 10  TFHDIRAALLARRELALLDVREEDPFAQ-----------AHPLFAANLPL---------- 48

Query: 252 LPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 309
                L+          + P+         A + A  L+ LG  DVA+ DG  + W  
Sbjct: 49  ---SRLELEIHARVPRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRN 103

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139

 Score = 74.0 bits (182), Expect = 2e-16
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 192 WTLEQVKRNIEEGT--YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 249
           ++ E +KR + +      LVD R  + +              H+P S  +P+    DA  
Sbjct: 25  YSFEDMKRIVGKHDPNVVLVDVREPSEYS-----------IVHIPASINVPYRSHPDAFA 73

Query: 250 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 309
             L   E +K+         K ++  C +G          +  G  + ++Y GS  +W +
Sbjct: 74  --LDPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVS 131

Query: 310 QPDTPVE 316
                ++
Sbjct: 132 HGGDKLD 138

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 18/130 (13%)

Query: 22  PVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 79
              S + +   +   +P++ ++D         R P  EY + HIP ++        D   
Sbjct: 23  QSYSFEDMKRIVGKHDPNVVLVDV--------REP-SEYSIVHIPASINVPYRSHPDA-- 71

Query: 80  NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL 139
                      F   +     ++   L+ Y   G         +    G+    +  G +
Sbjct: 72  ----FALDPLEFEKQIGIPKPDSAKELIFYCASGK-RGGEAQKVASSHGYSNTSLYPGSM 126

Query: 140 PRWRASGYDV 149
             W + G D 
Sbjct: 127 NDWVSHGGDK 136

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 45/283 (15%), Positives = 81/283 (28%), Gaps = 45/283 (15%)

Query: 45  WYMPDEQRNPFQEYQVAHIPGA-LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK 103
           W +  +  + F +  +A  P A ++F    + ++                         +
Sbjct: 225 WALQHKDEDAFVQALLAGQPEAPIYFARMKLVNKVGPRLLAELGAPERVDLPPERVRAWR 284

Query: 104 DGLVVYD-------GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 156
           +G VV D        K   + +      + F     W+L    P           + + D
Sbjct: 285 EGGVVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPADRPIH----LLAADAIAPD 340

Query: 157 AILKASAASEAIEKVYQGQVVGPTTFQTKFQPH---LIWTLEQVKRNIEEGTYQLVDARS 213
            I      S  I+ V           +            + ++V+  + +    L+D R+
Sbjct: 341 VIRAL--RSIGIDDVV-DWTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDVRN 397

Query: 214 KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV 273
              +             GH+P +  IP               +L        +  +  V 
Sbjct: 398 VDEWA-----------GGHLPQAHHIPL-------------SKLAAHIHD--VPRDGSVC 431

Query: 274 TACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE 316
             C TG  + I A  L   G  DV    G +  W      PVE
Sbjct: 432 VYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAW-RGKGFPVE 473

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 32/149 (21%), Positives = 49/149 (32%), Gaps = 31/149 (20%)

Query: 4   LAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHI 63
                  D +          VS D +   L +  L +LD         RN   E+   H+
Sbjct: 356 WTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDV--------RNV-DEWAGGHL 406

Query: 64  PGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWW 122
           P A    +  +A    ++P                    +DG + VY   G   +A    
Sbjct: 407 PQAHHIPLSKLAAHIHDVP--------------------RDGSVCVYCRTG-GRSAIAAS 445

Query: 123 MFRVFGHDRVWVLDGGLPRWRASGYDVES 151
           + R  G   V  + GG   WR  G+ VE+
Sbjct: 446 LLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Length = 152

 Score = 51.1 bits (122), Expect = 3e-08
 Identities = 20/145 (13%), Positives = 46/145 (31%), Gaps = 30/145 (20%)

Query: 13  STLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD 72
           S ++++     ++   L    R P++ ++D         R+  +     HI G+L +   
Sbjct: 19  SHMAMARSISYITSTQLLPLHRRPNIAIIDV--------RDE-ERNYDGHIAGSLHYASG 69

Query: 73  GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV------ 126
              D+ ++L   +  ++                +       +        +         
Sbjct: 70  SFDDKISHLVQNVKDKDTL--------------VFHSALSQVRGPTCARRLVNYLDEKKE 115

Query: 127 -FGHDRVWVLDGGLPRWRASGYDVE 150
             G   + +L+ G   W ASG  V 
Sbjct: 116 DTGIKNIMILERGFNGWEASGKPVC 140

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Length = 152

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 16/123 (13%), Positives = 32/123 (26%), Gaps = 29/123 (23%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
           T  Q+          ++D R + R              GH+ GS         D      
Sbjct: 31  TSTQLLPLHRRPNIAIIDVRDEERNYD-----------GHIAGSLHYAS-GSFDDK---- 74

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVT--------ACILALGLNRLGKHDVAVYDGSW 304
               L +  + +    +  V  +  + V            L       G  ++ + +  +
Sbjct: 75  -ISHLVQNVKDK----DTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGF 129

Query: 305 TEW 307
             W
Sbjct: 130 NGW 132

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466

 Score = 52.7 bits (126), Expect = 6e-08
 Identities = 20/175 (11%), Positives = 48/175 (27%), Gaps = 34/175 (19%)

Query: 135 LDGGLPRWRASGYDVESSASGDAILKASA--ASEAIEKVYQGQVVGPTTFQTKFQPHLIW 192
            D           + +     +  L       S+A   +          +Q       I 
Sbjct: 321 YDKNFINQIGWYLNYDQ----EINLIGDYHLVSKATHTLQLIGYDDIAGYQLPQSK--IQ 374

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
           T      +I      ++D R+   ++           +GH+  +  +P            
Sbjct: 375 TRSIHSEDITGNESHILDVRNDNEWN-----------NGHLSQAVHVPH----------- 412

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
              +L +       +    +   C +G+ + I    L   G H++   +  + + 
Sbjct: 413 --GKLLETDLP--FNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDI 463

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 30/143 (20%)

Query: 23  VVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
           +     L + L   EP   +LD         R+    Y   HI GA+   ++ + DR ++
Sbjct: 1   MSDAHVLKSRLEWGEPAFTILDV--------RDR-STYNDGHIMGAMAMPIEDLVDRASS 51

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
               L               +++D + VY      ++  V  + R  G + V  L GGL 
Sbjct: 52  S---LE--------------KSRD-IYVYGAGDEQTSQAVNLL-RSAGFEHVSELKGGLA 92

Query: 141 RWRASGYDVESSASGDAILKASA 163
            W+A G   E          A  
Sbjct: 93  AWKAIGGPTEGIIESRTPAGADD 115

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141

 Score = 44.3 bits (105), Expect = 6e-06
 Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 28/125 (22%)

Query: 195 EQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
             +K  +E G   + ++D R ++ ++            GH+ G+  +P   ++D + + L
Sbjct: 5   HVLKSRLEWGEPAFTILDVRDRSTYN-----------DGHIMGAMAMPIEDLVDRASSSL 53

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 312
                            + +                L   G   V+   G    W A   
Sbjct: 54  EKS--------------RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAI-G 98

Query: 313 TPVET 317
            P E 
Sbjct: 99  GPTEG 103

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Length = 144

 Score = 47.5 bits (113), Expect = 5e-07
 Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 31/138 (22%)

Query: 34  REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA 93
               + V+D         R+  + Y+  HIP A+            ++P      +    
Sbjct: 30  GYEGIIVVDV--------RDA-EAYKECHIPTAI------------SIPG----NKINED 64

Query: 94  AVSALGLENKDG-LVVY-DGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 151
               L   +K+  ++ Y  G     A +    F   G   V  L GG+  WR    +VE 
Sbjct: 65  TTKRL---SKEKVIITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEG 120

Query: 152 SASGDAILKASAASEAIE 169
           +    A L  +   E++E
Sbjct: 121 TLGAKADLFWNMKKESLE 138

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Length = 144

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 31/131 (23%)

Query: 193 TLEQVKRNIEEGT--YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 250
            +  +  +I++G     +VD R    +           +  H+P +  IP  ++ + +  
Sbjct: 19  DIADLSIDIKKGYEGIIVVDVRDAEAY-----------KECHIPTAISIPGNKINEDTTK 67

Query: 251 LLPADELKKRFEQEGISLEKPVVTAC--GTGVTACILALGLNRLGKHDVAVYDGSWTEWG 308
            L  +              K ++T C       A   A    +LG   V    G    W 
Sbjct: 68  RLSKE--------------KVIITYCWGPACNGATKAAAKFAQLG-FRVKELIGGIEYWR 112

Query: 309 AQPDTPVETSS 319
            + +  VE + 
Sbjct: 113 KE-NGEVEGTL 122

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129

 Score = 46.6 bits (111), Expect = 7e-07
 Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 16/124 (12%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
           ++      +  G ++ +D R+   F             GH  G+  +P+     AS    
Sbjct: 21  SVTVAHDLLLAG-HRYLDVRTPEEFS-----------QGHACGAINVPYMN-RGASGMSK 67

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 312
             D L++            ++  C +G  +      L   G   V    G ++ W     
Sbjct: 68  NTDFLEQVSSH--FGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKN-G 124

Query: 313 TPVE 316
            P +
Sbjct: 125 LPTK 128

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 18/130 (13%)

Query: 22  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 81
             VSV   H  L     + LD         R P +E+   H  GA+              
Sbjct: 18  SSVSVTVAHDLLLA-GHRYLDV--------RTP-EEFSQGHACGAINVPYMNRG------ 61

Query: 82  PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 141
              +     F   VS+   ++ + ++V    G  S      +    G   V  + GG   
Sbjct: 62  ASGMSKNTDFLEQVSSHFGQSDN-IIVGCQSGGRSIKATTDLLHA-GFTGVKDIVGGYSA 119

Query: 142 WRASGYDVES 151
           W  +G   ++
Sbjct: 120 WAKNGLPTKA 129

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1 Length = 154

 Score = 47.4 bits (112), Expect = 7e-07
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 27/140 (19%)

Query: 21  EPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
               +V WL+  L   + ++L  D         R P + Y+ +HI  A+   + G+  R 
Sbjct: 15  AISKTVAWLNEQLELGNERLLLMDC--------R-PQELYESSHIESAINVAIPGIMLRR 65

Query: 79  TN-----LPHMLPSEEAFAAAVSALGLENKDGLVVYD------GKGIFSAARVWWMFRVF 127
                  +  +    E         G    D +V+YD       +     + +  + +  
Sbjct: 66  LQKGNLPVRALFTRGEDRDRFTRRCG---TDTVVLYDESSSDWNENTGGESLLGLLLKKL 122

Query: 128 GHD--RVWVLDGGLPRWRAS 145
             +  R + L+GG  +++A 
Sbjct: 123 KDEGCRAFYLEGGFSKFQAE 142

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 23/127 (18%), Positives = 36/127 (28%), Gaps = 26/127 (20%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
            +    + ++E    LVD R    F             GH   +  +             
Sbjct: 8   NVADAHQKLQEKEAVLVDIRDPQSFA-----------MGHAVQAFHLTN----------- 45

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 312
             D L           + PV+  C  G ++   A  L + G   V   DG +  W  Q  
Sbjct: 46  --DTLGAFMRD--NDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFP 101

Query: 313 TPVETSS 319
             V   +
Sbjct: 102 AEVAYGA 108

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 32/133 (24%)

Query: 24  VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPH 83
           ++V   H  L+E +  ++D         R+P Q + + H   A     D +     +   
Sbjct: 7   INVADAHQKLQEKEAVLVDI--------RDP-QSFAMGHAVQAFHLTNDTLGAFMRDND- 56

Query: 84  MLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 142
                               D  ++V    G  S           G+D V+ +DGG   W
Sbjct: 57  -------------------FDTPVMVMCYHGNSS-KGAAQYLLQQGYDVVYSIDGGFEAW 96

Query: 143 RASGYDVESSASG 155
           +   +  E +   
Sbjct: 97  QR-QFPAEVAYGA 108

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Length = 588

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 28/119 (23%)

Query: 191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 250
                ++ R +E G   L+D R                  G + GS  IP          
Sbjct: 490 TVQWHEIDRIVENG-GYLIDVREPNELK-----------QGMIKGSINIPL--------- 528

Query: 251 LLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 309
               DEL+ R E+  + ++K +   C  G+   + A  L   G + V   DG +  +G 
Sbjct: 529 ----DELRDRLEE--VPVDKDIYITCQLGMRGYVAARMLMEKG-YKVKNVDGGFKLYGT 580

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 28/125 (22%)

Query: 196 QVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP 253
            +K  +E G   + ++D R ++ ++            GH+ G+  +P   ++D + + L 
Sbjct: 2   VLKSRLEWGEPAFTILDVRDRSTYN-----------DGHIMGAMAMPIEDLVDRASSSLE 50

Query: 254 ADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDT 313
                           + +                L   G   V+   G    W A    
Sbjct: 51  KS--------------RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAI-GG 95

Query: 314 PVETS 318
           P E  
Sbjct: 96  PTELE 100

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 30/125 (24%)

Query: 28  WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS 87
            L     EP   +LD         R+    Y   HI GA+   ++ + DR ++    L  
Sbjct: 6   RLEWG--EPAFTILDV--------RDR-STYNDGHIMGAMAMPIEDLVDRASSS---LE- 50

Query: 88  EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY 147
                        +++D + VY      ++  V  + R  G + V  L GGL  W+A G 
Sbjct: 51  -------------KSRD-IYVYGAGDEQTSQAVNLL-RSAGFEHVSELKGGLAAWKAIGG 95

Query: 148 DVESS 152
             E  
Sbjct: 96  PTELE 100

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major} Length = 152

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 28/130 (21%)

Query: 26  VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHML 85
           V+ L          V+D              +     I  ++            N+P + 
Sbjct: 13  VELLDNPDSLVKAAVIDCRDS----------DRDCGFIVNSI------------NMPTIS 50

Query: 86  PSEEAFAAAVSALGLENKDGLVVYDGK----GIFSAARVWWMFRVFGHD--RVWVLDGGL 139
            +EE +      L  E K+  V +  +        A R     +  G+    V+VL GG 
Sbjct: 51  CTEEMYEKLAKTLFEEKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGW 110

Query: 140 PRWRASGYDV 149
             +     DV
Sbjct: 111 EAFYHMYGDV 120

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Length = 124

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 23/118 (19%), Positives = 35/118 (29%), Gaps = 29/118 (24%)

Query: 34  REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA 93
                 VLD         RN   + +   I GA+      +A R   L    P++     
Sbjct: 29  ATGKYVVLDV--------RNAPAQVKKDQIKGAIAMPAKDLATRIGELD---PAKT---- 73

Query: 94  AVSALGLENKDGLVVYDGKGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 150
                        VVYD  G  +       +    G +  + L G L  W+     +E
Sbjct: 74  ------------YVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLE 118

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris} Length = 139

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 20/128 (15%)

Query: 192 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 249
            T        + G     +VD R     +          R G +PGS       ML+   
Sbjct: 24  LTTADAIALHKSGASDVVIVDIRDPREIE----------RDGKIPGSFSCTRG-MLEF-- 70

Query: 250 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 309
                 + +  + +     +K  V  C  G+ + + A     +G   VA  +G +  W  
Sbjct: 71  ----WIDPQSPYAKPIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRD 126

Query: 310 QPDTPVET 317
               P+E 
Sbjct: 127 A-GGPIEA 133

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A Length = 85

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 25/102 (24%)

Query: 207 QLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI 266
             +D R   ++           +  HV G+  IP               E+K+R      
Sbjct: 3   HWIDVRVPEQY-----------QQEHVQGAINIPL-------------KEVKERIATAVP 38

Query: 267 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWG 308
                V   C  G  +      L+ +G   V    G   +  
Sbjct: 39  DKNDTVKVYCNAGRQSGQAKEILSEMGYTHVEN-AGGLKDIA 79

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A Length = 153

 Score = 43.3 bits (101), Expect = 2e-05
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 18/133 (13%)

Query: 22  PVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 79
             +  + L A L     KVL  D+        R PF EY  +HI  A+  +   +  R  
Sbjct: 4   TQIVTERLVALLESGTEKVLLIDS--------R-PFVEYNTSHILEAININCSKLMKRRL 54

Query: 80  NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF-------GHDRV 132
               +L +E    +A   + ++    +VVYD      A+     F            + V
Sbjct: 55  QQDKVLITELIQHSAKHKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSV 114

Query: 133 WVLDGGLPRWRAS 145
            +L GG   +   
Sbjct: 115 HLLAGGFAEFSRC 127

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Length = 565

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 18/117 (15%), Positives = 37/117 (31%), Gaps = 29/117 (24%)

Query: 191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 250
               +Q+    E+    L+D R+                +G + G+  IP          
Sbjct: 474 PIHFDQIDNLSED--QLLLDVRNPGELQ-----------NGGLEGAVNIPV--------- 511

Query: 251 LLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
               DEL+ R  +  +  +K ++     G+   +    L   G +      G +  +
Sbjct: 512 ----DELRDRMHE--LPKDKEIIIFSQVGLRGNVAYRQLVNNG-YRARNLIGGYRTY 561

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4 Length = 157

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 29/151 (19%)

Query: 11  DYSTLSVSPKEPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALF 68
            +S+  V      ++   L+  + + ++ ++  DA        R   Q+YQ + I  +L 
Sbjct: 9   HHSSGLVPRGSGAITAKELYTMMTDKNISLIIMDA--------R-RMQDYQDSCILHSLS 59

Query: 69  FDVDGVADRTTN--LPHMLPSEEAFAAAVSALGLENKDGLVVYD----GKGIFSAARVWW 122
              + ++   T   +   LP +       +     N + +V+ D     K +     +  
Sbjct: 60  VPEEAISPGVTASWIEAHLPDDS----KDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRS 115

Query: 123 MFRVFGHD--------RVWVLDGGLPRWRAS 145
           +                  VL+GG   W   
Sbjct: 116 LKDALFKWESKTVLRNEPLVLEGGYENWLLC 146

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens} Length = 158

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 54  PFQEYQVAHIPGALFFDVDG--VADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG 111
           PF EY  +HI GA+  +        R       +    +      +        ++VYD 
Sbjct: 42  PFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIFSKEIIVYDE 101

Query: 112 -----KGIFSAARVWWMFRVFGHD--RVWVLDGGLPRWRAS 145
                  +  +  +  +      +     VL GGL  ++ +
Sbjct: 102 NTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQN 142

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A* Length = 169

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 19/137 (13%), Positives = 36/137 (26%), Gaps = 21/137 (15%)

Query: 16  SVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVA 75
            + P E    +   H        +V+D              +Y   HI     +    + 
Sbjct: 32  YLDPTELHRWMQEGHTTTLREPFQVVDVRGS----------DYMGGHIKDGWHYAYSRLK 81

Query: 76  DRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVY----DGKGIFSAARVWWMFRV--FGH 129
                L  +                     ++ +      +G  +A  +           
Sbjct: 82  QDPEYLRELKHRLLE-----KQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSR 136

Query: 130 DRVWVLDGGLPRWRASG 146
            R+WVL GG  RW++  
Sbjct: 137 CRLWVLRGGFSRWQSVY 153

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4 Length = 157

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 25/141 (17%)

Query: 19  PKEPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 76
            ++  ++   L+  + + ++ ++  DA        R   Q+YQ + I  +L   V   A 
Sbjct: 12  KEKGAITAKELYTMMTDKNISLIIMDA--------R-RMQDYQDSCILHSL--SVPEEAI 60

Query: 77  RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG------------IFSAARVWWMF 124
                   + +     +  +     N + +V+ D                   A   W  
Sbjct: 61  SPGVTASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWES 120

Query: 125 RVFGHDRVWVLDGGLPRWRAS 145
           +    +   VL+GG   W   
Sbjct: 121 KTVLRNEPLVLEGGYENWLLC 141

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Length = 110

 Score = 37.7 bits (88), Expect = 7e-04
 Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 21/102 (20%)

Query: 56  QEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGI 114
            EY+  H+P A    V+        L                   ++KD  ++++   G 
Sbjct: 26  DEYEELHLPNATLISVNDQEKLADFLS------------------QHKDKKVLLHCRAGR 67

Query: 115 FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 156
            +      M    G+     L+G +  +   G+ +    + D
Sbjct: 68  RALDAAKSM-HELGYTPY-YLEGNVYDFEKYGFRMVYDDTCD 107

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Length = 110

 Score = 37.7 bits (88), Expect = 7e-04
 Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 25/109 (22%)

Query: 199 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK 258
             +    + +VD R    ++             H+P +  I               ++ +
Sbjct: 10  EEVNFNDFIVVDVRELDEYE-----------ELHLPNATLISV-------------NDQE 45

Query: 259 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
           K  +      +K V+  C  G  A   A  ++ LG     + +G+  ++
Sbjct: 46  KLADFLSQHKDKKVLLHCRAGRRALDAAKSMHELGYTPYYL-EGNVYDF 93

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	319
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	100.0
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	100.0
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	100.0
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	100.0
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	100.0
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	100.0
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	100.0
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	100.0
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	100.0
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	100.0
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	100.0
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	100.0
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	100.0
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	100.0
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	100.0
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.96
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	99.89
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.89
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.89
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	99.89
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	99.88
1tq1_A	129	AT5G66040, senescence-associated family protein; C	99.88
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	99.87
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	99.87
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.86
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.86
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	99.86
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	99.86
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	99.86
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	99.86
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	99.86
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	99.86
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	99.85
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	99.85
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	99.85
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	99.85
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	99.85
1tq1_A	129	AT5G66040, senescence-associated family protein; C	99.85
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	99.85
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	99.84
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	99.84
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	99.84
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	99.84
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	99.83
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	99.83
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	99.83
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	99.83
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	99.83
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	99.82
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	99.82
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	99.82
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	99.81
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	99.81
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	99.81
2jtq_A	85	Phage shock protein E; solution structure rhodanes	99.81
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	99.8
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	99.8
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	99.8
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	99.79
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	99.79
1vee_A	134	Proline-rich protein family; hypothetical protein,	99.79
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	99.78
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	99.77
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	99.76
2ouc_A	142	Dual specificity protein phosphatase 10; rhodanese	99.75
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	99.74
1vee_A	134	Proline-rich protein family; hypothetical protein,	99.74
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	99.73
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	99.73
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	99.73
2jtq_A	85	Phage shock protein E; solution structure rhodanes	99.72
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	99.72
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	99.72
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	99.72
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	99.72
1qb0_A	211	Protein (M-phase inducer phosphatase 2 (CDC25B));	99.71
2ouc_A	142	Dual specificity protein phosphatase 10; rhodanese	99.71
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	99.71
2a2k_A	175	M-phase inducer phosphatase 2; dual specificity, s	99.71
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	99.7
1qb0_A	211	Protein (M-phase inducer phosphatase 2 (CDC25B));	99.7
2a2k_A	175	M-phase inducer phosphatase 2; dual specificity, s	99.69
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	99.69
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	99.68
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	99.67
3op3_A	216	M-phase inducer phosphatase 3; structural genomics	99.67
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	99.67
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	99.67
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	99.66
3op3_A	216	M-phase inducer phosphatase 3; structural genomics	99.65
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	99.65
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	99.64
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	99.61
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	99.6
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	99.6
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	99.52
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	99.51
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	99.5
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	99.45
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.42
2f46_A	156	Hypothetical protein; structural genomics, joint c	97.68
2f46_A	156	Hypothetical protein; structural genomics, joint c	96.76
4erc_A	150	Dual specificity protein phosphatase 23; alpha bet	91.91
1xri_A	151	AT1G05000; structural genomics, protein structure	89.8
2img_A	151	Dual specificity protein phosphatase 23; DUSP23, V	86.83
1v8c_A	168	MOAD related protein; riken structural genomics/pr	83.09
1xri_A	151	AT1G05000; structural genomics, protein structure	81.63

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=100.00  E-value=2.3e-54  Score=396.15  Aligned_cols=277  Identities=43%  Similarity=0.857  Sum_probs=247.8

Q ss_pred             CCCCCcccHHHHHHhcCCC----CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 020963           18 SPKEPVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA   93 (319)
Q Consensus        18 ~~~~~~Is~~~l~~~l~~~----~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~   93 (319)
                      ++..++||++||.++++++    +++|||||++.++..|++..+|..||||||+|+|+..+.+.....++++|+.++|.+
T Consensus        18 ~~~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~   97 (302)
T 3olh_A           18 LYFQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAE   97 (302)
T ss_dssp             --CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHH
T ss_pred             cCCCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHH
Confidence            4557899999999999765    899999999988887777889999999999999999887777778899999999999


Q ss_pred             HHHhCCCCCCCeEEEEcCC--CcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHH
Q 020963           94 AVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKV  171 (319)
Q Consensus        94 ~~~~~~i~~~~~vvly~~~--g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~  171 (319)
                      .+..++++++++|||||..  ++..|++++|+|+.+||++|++|+||+.+|.++|+|+++..+                 
T Consensus        98 ~~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~-----------------  160 (302)
T 3olh_A           98 YAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGKS-----------------  160 (302)
T ss_dssp             HHHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSCC-----------------
T ss_pred             HHHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCCC-----------------
Confidence            9999999999999999963  556799999999999999999999999999999999998742                 


Q ss_pred             hcCcccCCcccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCC
Q 020963          172 YQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTL  251 (319)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~  251 (319)
                          ......|.+..++...++.+++.+.+++++++|||||++.||.|...++....+.||||||+|||+.++.+..+.+
T Consensus       161 ----~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~  236 (302)
T 3olh_A          161 ----QPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLE  236 (302)
T ss_dssp             ----CCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCB
T ss_pred             ----CcCcCccccccCccceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCcc
Confidence                2345677778888999999999999987889999999999999988877666679999999999999999888899


Q ss_pred             CCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCc
Q 020963          252 LPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       252 ~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                      +++++|++.+...+++++++||+||++|.||+.++.+|+.+||++|++|+|||.+|..++ +|.-
T Consensus       237 ~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~-~P~~  300 (302)
T 3olh_A          237 KSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRA-RPED  300 (302)
T ss_dssp             CCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHH-CCCC
T ss_pred             CCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhcc-CCCC
Confidence            999999999999999999999999999999999999999999999999999999999985 7753

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=100.00  E-value=6.6e-53  Score=382.54  Aligned_cols=276  Identities=40%  Similarity=0.808  Sum_probs=233.4

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCC-CCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQ-RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~-r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      .++|++++|.+++++++++|||||++.+... +++..+|..||||||+|+|+..+.......++++++.++|.+.+..++
T Consensus         3 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g   82 (280)
T 1urh_A            3 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   82 (280)
T ss_dssp             CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             CceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            5689999999999877899999997765543 335678999999999999999887666566788999999999999999


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  179 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (319)
                      ++++++|||||..|.+.+.+++|.|+.+||++|++|+||+.+|..+|+|+++...                     ...+
T Consensus        83 i~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~---------------------~~~~  141 (280)
T 1urh_A           83 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV---------------------ELPE  141 (280)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC---------------------CCCC
T ss_pred             CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC---------------------CCCC
Confidence            9999999999998876689999999999999999999999999999999998753                     2244


Q ss_pred             cccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 020963          180 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  259 (319)
Q Consensus       180 ~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~  259 (319)
                      ..|....++...|+.+++.++++.++++|||||++.||.|....+....+.||||||+|||+.++.. .+.+++.+++++
T Consensus       142 ~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~-~~~~~~~~~l~~  220 (280)
T 1urh_A          142 GEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDA  220 (280)
T ss_dssp             CCCCCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-SSSBCCHHHHHH
T ss_pred             CccccccCcccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhc-CCccCCHHHHHH
Confidence            5777778888899999999999877899999999999999877665545689999999999999887 677899999999


Q ss_pred             HHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          260 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      .+...+++++++||+||++|.||+.++..|+.+||+||++|+|||.+|....++|+++.
T Consensus       221 ~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~  279 (280)
T 1urh_A          221 IFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPV  279 (280)
T ss_dssp             HHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC------------
T ss_pred             HHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCceec
Confidence            99988999999999999999999999999999999999999999999998545999874

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.6e-53  Score=389.76  Aligned_cols=275  Identities=32%  Similarity=0.617  Sum_probs=233.3

Q ss_pred             CCcccHHHHHHhcCC---CCeEEEEeecCCCCCCCCchhhh-hhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 020963           21 EPVVSVDWLHANLRE---PDLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS   96 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~---~~~~iiDvR~~~~~~~r~~~~~~-~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~   96 (319)
                      .++|||++|.++++.   ..+++||++|++|+..|++..+| .+||||||++++++.+.+..+.+++++|+.++|++.++
T Consensus        27 ~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~  106 (327)
T 3utn_X           27 FDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMS  106 (327)
T ss_dssp             CEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHH
T ss_pred             ccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence            458999999999853   25999999999999999988888 67999999999999988888889999999999999999


Q ss_pred             hCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcc
Q 020963           97 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  176 (319)
Q Consensus        97 ~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (319)
                      ++||+++++||||++.+...|+|++|+|+.+|+++|++|||| .+|+++|+|+++......               ....
T Consensus       107 ~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~~~~~---------------~p~p  170 (327)
T 3utn_X          107 NLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSKVAAF---------------SPYP  170 (327)
T ss_dssp             HTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCCCSCS---------------CSSC
T ss_pred             HcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCCccCc---------------CCcC
Confidence            999999999999998888889999999999999999999976 999999999988643110               0001


Q ss_pred             cCCcccccccCCccccCHHHHHHHhhcC----CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCC
Q 020963          177 VGPTTFQTKFQPHLIWTLEQVKRNIEEG----TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL  252 (319)
Q Consensus       177 ~~~~~~~~~~~~~~~is~~~l~~~~~~~----~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~  252 (319)
                      .....+....++..+++.+++.++++++    +++|||+|++++|.|...+|+...+.||||||+|+|+.++++.++.+.
T Consensus       171 ~~~~~~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~  250 (327)
T 3utn_X          171 KSHYESSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTY  250 (327)
T ss_dssp             CCCCCCSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCC
T ss_pred             CcccccccccCchheecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCC
Confidence            1222334455667789999999988753    478999999999999988877666899999999999999998776543


Q ss_pred             --CHHHHHHHHHH------cCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          253 --PADELKKRFEQ------EGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       253 --~~~~l~~~l~~------~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                        ..+.+++.+++      .+++++++||+||++|++|+..+++|+.+||+++++|||||.+|....
T Consensus       251 ~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~  317 (327)
T 3utn_X          251 PEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKS  317 (327)
T ss_dssp             CCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhcccc
Confidence              23555554443      389999999999999999999999999999999999999999998763

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=100.00  E-value=1.8e-52  Score=382.78  Aligned_cols=278  Identities=44%  Similarity=0.789  Sum_probs=243.9

Q ss_pred             CCCCcccHHHHHHhcCC----CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHH
Q 020963           19 PKEPVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA   94 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~----~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~   94 (319)
                      ++.++|++++|.+++++    ++++|||||++.++ .+++..+|..||||||+|+|+..+........+++|+.++|++.
T Consensus         5 ~~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~-~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~   83 (296)
T 1rhs_A            5 LYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADY   83 (296)
T ss_dssp             CCCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTT-SCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHH
T ss_pred             CcCceeeHHHHHHHHhccccCCCeEEEEecccCcC-CcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHH
Confidence            45789999999999976    58999999977766 34456899999999999999987766555567889999999999


Q ss_pred             HHhCCCCCCCeEEEEcCC--CcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHh
Q 020963           95 VSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVY  172 (319)
Q Consensus        95 ~~~~~i~~~~~vvly~~~--g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  172 (319)
                      +..++++++++|||||..  |.+.+.+++|+|+.+||++|++|+||+.+|.++|+|+++..+                  
T Consensus        84 l~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~------------------  145 (296)
T 1rhs_A           84 VGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPS------------------  145 (296)
T ss_dssp             HHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCC------------------
T ss_pred             HHHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCCC------------------
Confidence            999999999999999988  776788999999999999999999999999999999988753                  


Q ss_pred             cCcccCCcccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCC-CCCccccCCCcccCcccccCCCCCC
Q 020963          173 QGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTL  251 (319)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~-~~~~ghIpgA~~ip~~~l~~~~~~~  251 (319)
                         ...+..|....++...++.+++.++++.++++|||||++.||.|....+.. ..+.||||||+|||+.++.+.++.|
T Consensus       146 ---~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~  222 (296)
T 1rhs_A          146 ---RPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFE  222 (296)
T ss_dssp             ---CCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCB
T ss_pred             ---CCCCCCcccCCCcceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcC
Confidence               123456777778888999999999988778999999999999987665543 2258999999999999998877889


Q ss_pred             CCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          252 LPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       252 ~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++.++|++++...+++++++||+||++|.||+.++..|+.+||.+|++|+|||.+|....++|++++
T Consensus       223 ~~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~  289 (296)
T 1rhs_A          223 KSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVS  289 (296)
T ss_dssp             CCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEB
T ss_pred             CCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccC
Confidence            9999999999988899999999999999999999999999999999999999999998325999864

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=100.00  E-value=1.3e-51  Score=372.23  Aligned_cols=264  Identities=28%  Similarity=0.468  Sum_probs=234.6

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      .+.|++++|.+++++++++|||||         +..+|..||||||+|+|+..+........+++++.+.|.+.+..+++
T Consensus         8 ~~~is~~~l~~~l~~~~~~iiDvR---------~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi   78 (271)
T 1e0c_A            8 PLVIEPADLQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGH   78 (271)
T ss_dssp             CSEECHHHHHTTTTCTTEEEEECS---------CHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC
T ss_pred             CceeeHHHHHHhccCCCeEEEEcC---------CcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            568999999999987789999999         78899999999999999998876655677889999999999999999


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCCc
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT  180 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (319)
                      +++++|||||..|..++.+++|.|+.+||++|++|+||+.+|..+|+|+++...                     ..+..
T Consensus        79 ~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~---------------------~~~~~  137 (271)
T 1e0c_A           79 RPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP---------------------APAGG  137 (271)
T ss_dssp             CTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC---------------------CCCCS
T ss_pred             CCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC---------------------CCCCC
Confidence            999999999988875699999999999999999999999999999999998753                     22456


Q ss_pred             ccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHH
Q 020963          181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR  260 (319)
Q Consensus       181 ~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~  260 (319)
                      .|....+....|+.+++.+++++++++|||||++.||.|....+   .+.||||||+|+|+.++.+..+.+...++|++.
T Consensus       138 ~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~---~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~  214 (271)
T 1e0c_A          138 PVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLA---AKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGR  214 (271)
T ss_dssp             CCCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCS---SSCSBCTTCEECCGGGGEEGGGTTEECTTHHHH
T ss_pred             CccccCCccccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCC---CcCCcCCCceeccHHHhCCCCCCCCCHHHHHHH
Confidence            67777777788999999999988889999999999998765544   368999999999999987765555544899999


Q ss_pred             HHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          261 FEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       261 l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      +...+++++++||+||++|.||+.+++.|+.+||++|++|+|||.+|....++|+++
T Consensus       215 ~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~  271 (271)
T 1e0c_A          215 LEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL  271 (271)
T ss_dssp             HHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred             HHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence            998899999999999999999999999999999999999999999999984499975

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=100.00  E-value=1.5e-50  Score=373.46  Aligned_cols=266  Identities=28%  Similarity=0.494  Sum_probs=227.4

Q ss_pred             CCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhh-hhhcCCcCceecCccc-ccccCCCCCCCCCCHHHHHHH
Q 020963           17 VSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQE-YQVAHIPGALFFDVDG-VADRTTNLPHMLPSEEAFAAA   94 (319)
Q Consensus        17 ~~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~-~~~ghIpgAi~ip~~~-l~~~~~~~~~~~~~~~~~~~~   94 (319)
                      +.+...+|+++||.+++++++++|||||         ...+ |..||||||+|+|+.. +..   ....++++.++|.+.
T Consensus        35 ~~~~~~~is~~~l~~~l~~~~~~iiDvR---------~~~e~y~~gHIpGAi~ip~~~~~~~---~~~~~~~~~~~~~~~  102 (318)
T 3hzu_A           35 YAHPERLVTADWLSAHMGAPGLAIVESD---------EDVLLYDVGHIPGAVKIDWHTDLND---PRVRDYINGEQFAEL  102 (318)
T ss_dssp             SSSGGGEECHHHHHHHTTCTTEEEEECC---------SSTTSGGGCBCTTEEECCHHHHHBC---SSSSSBCCHHHHHHH
T ss_pred             cCCCCceecHHHHHHhccCCCEEEEECC---------CChhHHhcCcCCCCeEeCchhhhcc---CcccCCCCHHHHHHH
Confidence            3445678999999999988889999998         4444 9999999999999753 322   234678999999999


Q ss_pred             HHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcC
Q 020963           95 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQG  174 (319)
Q Consensus        95 ~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (319)
                      +..+|++++++|||||..+..++.+++|+|+.+||++|++|+||+.+|.++|+|+++..+                    
T Consensus       103 l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~--------------------  162 (318)
T 3hzu_A          103 MDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVP--------------------  162 (318)
T ss_dssp             HHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCC--------------------
T ss_pred             HHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCC--------------------
Confidence            999999999999999988775699999999999999999999999999999999998642                    


Q ss_pred             cccCCccccc--ccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCC-----CCCCccccCCCcccCcccccCC
Q 020963          175 QVVGPTTFQT--KFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR-----KGIRSGHVPGSKCIPFPQMLDA  247 (319)
Q Consensus       175 ~~~~~~~~~~--~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~-----~~~~~ghIpgA~~ip~~~l~~~  247 (319)
                       ......|..  ..++...++.+++.++++++  +|||||++.||.|...++.     ...+.||||||+|||+.++++.
T Consensus       163 -~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~  239 (318)
T 3hzu_A          163 -TKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADE  239 (318)
T ss_dssp             -CCCCCCCCCCCCCCTTTBCCHHHHHHHTTTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCT
T ss_pred             -CCCCCccccccCCCccccccHHHHHHhhcCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCC
Confidence             223455655  35677899999999998764  8999999999987543322     2235699999999999999998


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHh-cCCCCceeeeCcHHHHhCCCCCCCccCC
Q 020963          248 SQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPVETSS  319 (319)
Q Consensus       248 ~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~-~G~~~v~~~~Gg~~~W~~~~~~p~~~~~  319 (319)
                      ++.|++.++|++++.  +++++++||+||++|.||+.++..|.. +||++|++|+|||.+|....++|++++.
T Consensus       240 ~g~~~~~~~l~~~~~--~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~  310 (318)
T 3hzu_A          240 SGRFRSREELERLYD--FINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGE  310 (318)
T ss_dssp             TSCBCCHHHHHHHTT--TCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred             CCcCCCHHHHHHHhc--CCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            999999999999994  899999999999999999999999996 9999999999999999964459999863

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=100.00  E-value=1.6e-49  Score=361.10  Aligned_cols=270  Identities=30%  Similarity=0.557  Sum_probs=227.6

Q ss_pred             CCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCccc-ccccCCCCCCCCCCHHHHHHHH
Q 020963           17 VSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADRTTNLPHMLPSEEAFAAAV   95 (319)
Q Consensus        17 ~~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~-l~~~~~~~~~~~~~~~~~~~~~   95 (319)
                      +.+...+|++++|.+++++++++|||||       . ...+|..||||||+|+|+.. +..   .....+++.++|.+.+
T Consensus         3 ~~~~~~~is~~~l~~~l~~~~~~liDvR-------~-~~~e~~~ghIpgA~~ip~~~~~~~---~~~~~~~~~~~~~~~~   71 (285)
T 1uar_A            3 YAHPEVLVSTDWVQEHLEDPKVRVLEVD-------E-DILLYDTGHIPGAQKIDWQRDFWD---PVVRDFISEEEFAKLM   71 (285)
T ss_dssp             CSCGGGEECHHHHHTTTTCTTEEEEEEC-------S-STTHHHHCBCTTCEEECHHHHHBC---SSSSSBCCHHHHHHHH
T ss_pred             CCCCCceEcHHHHHHhcCCCCEEEEEcC-------C-CcchhhcCcCCCCEECCchhhccC---CcccCCCCHHHHHHHH
Confidence            3444679999999999988789999998       1 24799999999999999874 322   2356788999999999


Q ss_pred             HhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCc
Q 020963           96 SALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ  175 (319)
Q Consensus        96 ~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (319)
                      ..++++++++|||||..|.+++.+++|.|+.+||++|++|+||+.+|.++|+|+++..+                     
T Consensus        72 ~~~gi~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~---------------------  130 (285)
T 1uar_A           72 ERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVP---------------------  130 (285)
T ss_dssp             HHTTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCC---------------------
T ss_pred             HHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCC---------------------
Confidence            99999999999999987765689999999999999999999999999999999988643                     


Q ss_pred             ccCCccccc-ccCCccccCHHHHHHHhh---cCCcEEEeccCCCcccCCCCC-----CCCCCCccccCCCcccCcccccC
Q 020963          176 VVGPTTFQT-KFQPHLIWTLEQVKRNIE---EGTYQLVDARSKARFDGDAPE-----PRKGIRSGHVPGSKCIPFPQMLD  246 (319)
Q Consensus       176 ~~~~~~~~~-~~~~~~~is~~~l~~~~~---~~~~~liDvR~~~e~~g~~~~-----~~~~~~~ghIpgA~~ip~~~l~~  246 (319)
                      ......|.. ..++...|+.+++.+.+.   .++..|||||++.||.|....     +...++.||||||+|||+.++.+
T Consensus       131 ~~~~~~~~~~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~  210 (285)
T 1uar_A          131 SYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVN  210 (285)
T ss_dssp             CCCCCCCCCCCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBC
T ss_pred             cccCCCcccccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcC
Confidence            123345555 556678999999999884   234579999999999875322     22233589999999999999988


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHH-hcCCCCceeeeCcHHHHh-CCCCCCCccCC
Q 020963          247 ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLN-RLGKHDVAVYDGSWTEWG-AQPDTPVETSS  319 (319)
Q Consensus       247 ~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~-~~G~~~v~~~~Gg~~~W~-~~~~~p~~~~~  319 (319)
                      ..+.+++.++|++.+.+.+++++++|||||++|.||+.+++.|+ .+||++|++|+|||.+|. .. ++|++++.
T Consensus       211 ~~~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~-g~pv~~g~  284 (285)
T 1uar_A          211 PDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLV-GVPIAKGE  284 (285)
T ss_dssp             TTSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTST-TCCCBCSC
T ss_pred             CCCcCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCC-CCCcccCC
Confidence            77889999999999998899999999999999999999999999 999999999999999998 66 59999863

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=100.00  E-value=1.8e-49  Score=359.35  Aligned_cols=264  Identities=27%  Similarity=0.534  Sum_probs=224.1

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCc-hhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNP-FQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~-~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      ...|++++|.+++++++++|||||         + ..+|..||||||+|+|+..+...  ....++++.++|.+.+..++
T Consensus         5 ~~~is~~~l~~~l~~~~~~liDvR---------~~~~ey~~ghIpgA~~ip~~~~~~~--~~~~~~~~~~~~~~~~~~~g   73 (277)
T 3aay_A            5 DVLVSADWAESNLHAPKVVFVEVD---------EDTSAYDRDHIAGAIKLDWRTDLQD--PVKRDFVDAQQFSKLLSERG   73 (277)
T ss_dssp             HHEECHHHHHTTTTCTTEEEEEEE---------SSSHHHHHCBSTTCEEEETTTTTBC--SSSSSBCCHHHHHHHHHHHT
T ss_pred             CceEcHHHHHHHhCCCCEEEEEcC---------CChhhHhhCCCCCcEEecccccccC--CCCCCCCCHHHHHHHHHHcC
Confidence            468999999999988789999999         5 68999999999999998764321  22467788999999999999


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  179 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (319)
                      ++++++|||||..++..+.+++|+|+.+||++|++|+||+.+|..+|+|+++...                     ..+.
T Consensus        74 i~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~---------------------~~~~  132 (277)
T 3aay_A           74 IANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV---------------------SRPV  132 (277)
T ss_dssp             CCTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC---------------------CCCC
T ss_pred             CCCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC---------------------CcCC
Confidence            9999999999988766689999999999999999999999999999999988653                     1233


Q ss_pred             cccccc-cCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCC-----CCCCCCccccCCCcccCcccccCCCCCCCC
Q 020963          180 TTFQTK-FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPE-----PRKGIRSGHVPGSKCIPFPQMLDASQTLLP  253 (319)
Q Consensus       180 ~~~~~~-~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~-----~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~  253 (319)
                      ..|... ......++.+++.+++.+++  |||||++.||.|....     +....+.||||||+|||+.++....+.|++
T Consensus       133 ~~~~~~~~~~~~~~~~~el~~~~~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~  210 (277)
T 3aay_A          133 TSYTASPPDNTIRAFRDEVLAAINVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKS  210 (277)
T ss_dssp             CCCCCCCCCGGGEECHHHHHHTTTTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCC
T ss_pred             CCccccCcccchhcCHHHHHHhcCCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCC
Confidence            444442 34556789999999887654  9999999999874211     112235699999999999998888889999


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHh-cCCCCceeeeCcHHHHhC-CCCCCCccCC
Q 020963          254 ADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGA-QPDTPVETSS  319 (319)
Q Consensus       254 ~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~-~G~~~v~~~~Gg~~~W~~-~~~~p~~~~~  319 (319)
                      .++|++.+.+.+++++++||+||++|.||+.+++.|+. +||++|++|+|||.+|.. . ++|++++.
T Consensus       211 ~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~-g~pv~~g~  277 (277)
T 3aay_A          211 DEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLV-GAPIELGS  277 (277)
T ss_dssp             HHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTST-TCCCBCCC
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCC-CCCCccCC
Confidence            99999999988999999999999999999999999995 999999999999999999 6 59999873

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=100.00  E-value=3e-47  Score=358.00  Aligned_cols=263  Identities=26%  Similarity=0.506  Sum_probs=211.3

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCccc-cccc--CCCCCCCCCCHHHHHHHHHh
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADR--TTNLPHMLPSEEAFAAAVSA   97 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~-l~~~--~~~~~~~~~~~~~~~~~~~~   97 (319)
                      .+.|+++||.+++++  ++|||||++.+.. +....+|..||||||+|+|+.. +...  .....+++|+.++|.+.++.
T Consensus        13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~-~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~   89 (373)
T 1okg_A           13 KVFLDPSEVADHLAE--YRIVDCRYSLKIK-DHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA   89 (373)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSST-TTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEEcHHHHHHHcCC--cEEEEecCCcccc-ccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence            679999999999976  9999999443321 1235799999999999999986 6543  34467789999999999999


Q ss_pred             CCCCCCCeEEEEc-CCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcc
Q 020963           98 LGLENKDGLVVYD-GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  176 (319)
Q Consensus        98 ~~i~~~~~vvly~-~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (319)
                      ++++++++||||| ..|.+.+++++|+|+.+|| +|++|+||+.+|.++|+|+++....                     
T Consensus        90 ~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~~~---------------------  147 (373)
T 1okg_A           90 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEPS---------------------  147 (373)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCCC---------------------
T ss_pred             cCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCCCC---------------------
Confidence            9999999999999 5566645599999999999 9999999999999999999887421                     


Q ss_pred             cCCc-----ccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCC--CCCCccccCCCcccCccccc--CC
Q 020963          177 VGPT-----TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR--KGIRSGHVPGSKCIPFPQML--DA  247 (319)
Q Consensus       177 ~~~~-----~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~--~~~~~ghIpgA~~ip~~~l~--~~  247 (319)
                      ....     .|....++..+  .+++     .++++|||||++.||.|.. ++.  .. ..||||||+|||+.++.  +.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~--~~~v-----~~~~~lIDvR~~~Ef~G~~-~~~~~~~-~~GhIpGAiniP~~~l~~~~~  218 (373)
T 1okg_A          148 SLPRPATHWPFKTAFQHHYL--VDEI-----PPQAIITDARSADRFASTV-RPYAADK-MPGHIEGARNLPYTSHLVTRG  218 (373)
T ss_dssp             SCCCCCCCCCSCSSCCSBCC--GGGS-----CTTCCEEECSCHHHHTCCS-SCCTTCS-SSSCSTTCEECCGGGGEECCS
T ss_pred             cCccccccccccccCChHHH--HHHh-----ccCceEEeCCCHHHccccc-cccccCC-cCccCCCcEEecHHHhhccCC
Confidence            1222     45555554443  3443     4578999999999998765 331  11 28999999999999987  66


Q ss_pred             CCC-CCCHHHHHHHHHHc--CCCC---CCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          248 SQT-LLPADELKKRFEQE--GISL---EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       248 ~~~-~~~~~~l~~~l~~~--~~~~---~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      ++. |+++++|++.+.+.  ++++   +++||+||++|.||+.+++.|+.+||.+|++|+|||.+|....++|+++
T Consensus       219 ~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~  294 (373)
T 1okg_A          219 DGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMR  294 (373)
T ss_dssp             SSCEECCHHHHHHHHHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHH
T ss_pred             CCCccCCHHHHHHHHHhhhcCCCcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCccc
Confidence            667 89999999999977  7788   9999999999999999999999999999999999999998732478764

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=100.00  E-value=8.2e-45  Score=347.56  Aligned_cols=270  Identities=29%  Similarity=0.451  Sum_probs=226.6

Q ss_pred             CCCCcccHHHHHHhcC--------CCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHH
Q 020963           19 PKEPVVSVDWLHANLR--------EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEA   90 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~--------~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~   90 (319)
                      .....|+++++.++++        .++++|||+|+.       +..+|..||||||+|+|+..+...   ..+.+++.++
T Consensus       121 ~~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~-------~~~e~~~ghIpgA~nip~~~~~~~---~~~~~~~~~~  190 (423)
T 2wlr_A          121 HFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWG-------APKLYLISHIPGADYIDTNEVESE---PLWNKVSDEQ  190 (423)
T ss_dssp             TGGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESS-------SCSHHHHCBCTTCEEEEGGGTEET---TTTEECCHHH
T ss_pred             CCCcccCHHHHHHHhhccccccccCCCeEEEEecCC-------CchhhccCcCCCcEEcCHHHhccC---CCCCCCCHHH
Confidence            3457899999999887        347999999821       235899999999999999876431   1356788999


Q ss_pred             HHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHH
Q 020963           91 FAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK  170 (319)
Q Consensus        91 ~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~  170 (319)
                      |.+.+...+++++++||+||.+|. +|+++++.|+.+||++|++|+||+.+|...|+|++++...               
T Consensus       191 l~~~~~~~gi~~~~~ivvyC~~G~-~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~~~---------------  254 (423)
T 2wlr_A          191 LKAMLAKHGIRHDTTVILYGRDVY-AAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPP---------------  254 (423)
T ss_dssp             HHHHHHHTTCCTTSEEEEECSSHH-HHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSSCC---------------
T ss_pred             HHHHHHHcCCCCCCeEEEECCCch-HHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCCCC---------------
Confidence            999999999999999999998654 5999999999999999999999999999999999885421               


Q ss_pred             HhcCcccCCcccccc--cCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcc------
Q 020963          171 VYQGQVVGPTTFQTK--FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP------  242 (319)
Q Consensus       171 ~~~~~~~~~~~~~~~--~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~------  242 (319)
                          ...+...|...  .++...++.+++.+++..++++|||||++.||.|....+....+.||||||+|+|+.      
T Consensus       255 ----~~~~~~~~~~~~~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~  330 (423)
T 2wlr_A          255 ----KVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHM  330 (423)
T ss_dssp             ----CCCCCCCCSSCSCSCGGGEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCC
T ss_pred             ----CCCCCcCcccccCCChhheecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccH
Confidence                01122345443  356778999999998887789999999999999887654444468999999998876      


Q ss_pred             -cccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          243 -QMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       243 -~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                       ++.+.++.+++.++|++.+...+++++++||+||++|.||+.++..|+.+||.||++|+|||.+|....++|++++
T Consensus       331 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~  407 (423)
T 2wlr_A          331 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATG  407 (423)
T ss_dssp             GGGBCTTSSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECS
T ss_pred             HHHcCCCCcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccC
Confidence             6677778899999999999888999999999999999999999999999999999999999999998336999875

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=100.00  E-value=1.1e-42  Score=306.65  Aligned_cols=224  Identities=25%  Similarity=0.423  Sum_probs=185.7

Q ss_pred             CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcc--cccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEEEcCCC
Q 020963           36 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD--GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG  113 (319)
Q Consensus        36 ~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvly~~~g  113 (319)
                      ++++|||||         +..+|..||||||+|+|+.  .+..  ....+++++.+.|.+.+..+++  +++|||||..|
T Consensus         5 ~~~~iiDvR---------~~~ey~~ghIpgAi~ip~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~--~~~ivvyc~~g   71 (230)
T 2eg4_A            5 EDAVLVDTR---------PRPAYEAGHLPGARHLDLSAPKLRL--REEAELKALEGGLTELFQTLGL--RSPVVLYDEGL   71 (230)
T ss_dssp             TTCEEEECS---------CHHHHHHCBCTTCEECCCCSCCCCC--CSHHHHHHHHHHHHHHHHHTTC--CSSEEEECSSS
T ss_pred             CCEEEEECC---------ChhhHhhCcCCCCEECCccchhccc--CCCCCcCCCHHHHHHHHHhcCC--CCEEEEEcCCC
Confidence            468999999         7899999999999999998  5431  1223345666789999999877  78999999887


Q ss_pred             cchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCCcccccccCCccccC
Q 020963          114 IFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWT  193 (319)
Q Consensus       114 ~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is  193 (319)
                      ..++.+++|+|+ +||++|++|+||   |.+  +|+++..+                     ......|....++...++
T Consensus        72 ~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~~~---------------------~~~~~~~~~~~~~~~~i~  124 (230)
T 2eg4_A           72 TSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKEEP---------------------KPERTEVVAKLRRDWLLT  124 (230)
T ss_dssp             CHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCSCC---------------------CCCCCCCCCCCCGGGBCC
T ss_pred             CccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCCCC---------------------CcccccceecCCccceeC
Confidence            746899999999 999999999999   877  88876542                     234466777778888999


Q ss_pred             HHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEE
Q 020963          194 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  273 (319)
Q Consensus       194 ~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vi  273 (319)
                      .+++.+     +++|||||++.||.+...++. ..+.||||||+|+|+.++.+..          +++.+.+++++++||
T Consensus       125 ~~e~~~-----~~~liDvR~~~e~~~~~~~~~-~~~~ghIpgA~~ip~~~~~~~~----------e~~~~~~~~~~~~iv  188 (230)
T 2eg4_A          125 ADEAAR-----HPLLLDVRSPEEFQGKVHPPC-CPRGGRIPGSKNAPLELFLSPE----------GLLERLGLQPGQEVG  188 (230)
T ss_dssp             HHHHHT-----CSCEEECSCHHHHTTSCCCTT-SSSCCBCTTCEECCGGGGGCCT----------THHHHHTCCTTCEEE
T ss_pred             HHHHhh-----CCeEEeCCCHHHcCcccCCCC-CccCCCCCCcEEcCHHHhCChH----------HHHHhcCCCCCCCEE
Confidence            999886     588999999999987544432 3366999999999999986642          145556899999999


Q ss_pred             EecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          274 TACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       274 vyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      +||++|.||+.++..|+.+| .+|++|+|||.+|..+ ++|+++
T Consensus       189 ~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~-g~p~~~  230 (230)
T 2eg4_A          189 VYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQE-GLPTEP  230 (230)
T ss_dssp             EECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHT-TCCCBC
T ss_pred             EEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhc-CCCCCC
Confidence            99999999999999999999 8999999999999999 599975

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=100.00  E-value=6e-43  Score=334.63  Aligned_cols=240  Identities=16%  Similarity=0.187  Sum_probs=198.8

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           19 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      |..++||++||.+++++++++|||+|++.....+....+|..||||||+|+|+..+         .+|+.++|++.++.+
T Consensus         1 ~~~~~is~~~L~~~l~~~~~~ilD~r~~~~~~~~~~~~~y~~gHIPgAv~~~~~~l---------~lp~~~~f~~~~~~l   71 (423)
T 2wlr_A            1 MASAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWL---------DKMSTEQLNAWIKQH   71 (423)
T ss_dssp             ---CCCCSCBCHHHHHHTTCEEEECSCHHHHHTCCSSTTCCCSBCTTCEECCGGGG---------GGCCHHHHHHHHHHT
T ss_pred             CCccccCHHHHHHHhCCCCeEEEECCCcccccccccccccccCCCCCCccCCHHHh---------cCCCHHHHHHHHHHc
Confidence            45679999999999987789999999321100111123677999999999998754         268899999999999


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccC
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVG  178 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (319)
                      ||+++++|||||..+  .+++++|+|+.+||++|++|+||+   .++|+ ++...                         
T Consensus        72 gi~~~~~vVvy~~~~--~a~r~~w~l~~~G~~~V~vl~Gg~---~~~g~-~~~~~-------------------------  120 (423)
T 2wlr_A           72 NLKTDAPVALYGNDK--DVDAVKTRLQKAGLTHISILSDAL---SEPSR-LQKLP-------------------------  120 (423)
T ss_dssp             TCCTTSCEEEESCHH--HHHHHHHHHHHTTCCCEEEBTTTT---SCGGG-CBCCT-------------------------
T ss_pred             CCCCCCeEEEECCCC--CHHHHHHHHHHcCCceeEeccchh---hcCCC-cccCC-------------------------
Confidence            999999999998764  589999999999999999999985   33444 22110                         


Q ss_pred             CcccccccCCccccCHHHHHHHhh--------cCCcEEEecc--CCCcccCCCCCCCCCCCccccCCCcccCcccccC-C
Q 020963          179 PTTFQTKFQPHLIWTLEQVKRNIE--------EGTYQLVDAR--SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD-A  247 (319)
Q Consensus       179 ~~~~~~~~~~~~~is~~~l~~~~~--------~~~~~liDvR--~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~-~  247 (319)
                              +....++.+++.+.+.        .++++|||+|  ++.+|           +.||||||+|+|+.++.. .
T Consensus       121 --------~~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~-----------~~ghIpgA~nip~~~~~~~~  181 (423)
T 2wlr_A          121 --------HFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLY-----------LISHIPGADYIDTNEVESEP  181 (423)
T ss_dssp             --------TGGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHH-----------HHCBCTTCEEEEGGGTEETT
T ss_pred             --------CCCcccCHHHHHHHhhccccccccCCCeEEEEecCCCchhh-----------ccCcCCCcEEcCHHHhccCC
Confidence                    1123678888888776        3478999999  99999           689999999999998865 5


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          248 SQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       248 ~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      .+.++++++|++.+.+.+++++++||+||++|.+|+.+++.|+.+||++|++|+|||.+|...+ +|++++
T Consensus       182 ~~~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g-~pv~~g  251 (423)
T 2wlr_A          182 LWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAG-LPVERG  251 (423)
T ss_dssp             TTEECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTT-CCCBCS
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCC-CCcccC
Confidence            5789999999999999999999999999999999999999999999999999999999999984 999875

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=100.00  E-value=1.8e-39  Score=319.28  Aligned_cols=229  Identities=19%  Similarity=0.225  Sum_probs=190.1

Q ss_pred             CCCCcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHh
Q 020963           19 PKEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA   97 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~   97 (319)
                      +..+.||+++|.+++++ ++++|||||         +..+|..||||||+|+|+..                 |...+..
T Consensus         4 ~~~~~is~~~l~~~l~~~~~~~liDvR---------~~~e~~~ghIpgAv~ip~~~-----------------~~~~~~~   57 (539)
T 1yt8_A            4 SQIAVRTFHDIRAALLARRELALLDVR---------EEDPFAQAHPLFAANLPLSR-----------------LELEIHA   57 (539)
T ss_dssp             --CEEECHHHHHHHHHHTCCBEEEECS---------CHHHHTTSBCTTCEECCGGG-----------------HHHHHHH
T ss_pred             CcCcccCHHHHHHHHhCCCCeEEEECC---------CHHHHhcCcCCCCEECCHHH-----------------HHHHHHh
Confidence            34678999999999975 379999999         78899999999999999864                 3445566


Q ss_pred             CCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCccc
Q 020963           98 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV  177 (319)
Q Consensus        98 ~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (319)
                      +.++++++|||||..+. ++.+++|.|+.+||++|++|+||+.+|+++|+|++++.+..    ....             
T Consensus        58 l~~~~~~~iVvyc~~g~-~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~----~~~~-------------  119 (539)
T 1yt8_A           58 RVPRRDTPITVYDDGEG-LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVNVP----SKAF-------------  119 (539)
T ss_dssp             HSCCTTSCEEEECSSSS-HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSSSHH----HHHH-------------
T ss_pred             hCCCCCCeEEEEECCCC-hHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCCcCc----Ccch-------------
Confidence            66778999999998776 59999999999999999999999999999999999875421    0001             


Q ss_pred             CCcccccccCCccccCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHH
Q 020963          178 GPTTFQTKFQPHLIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE  256 (319)
Q Consensus       178 ~~~~~~~~~~~~~~is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~  256 (319)
                        ..|.........++++++.+++.+ ++++|||||++++|           ..||||||+|+|+.++.           
T Consensus       120 --g~~~~~~~~~~~it~~~l~~~l~~~~~~~llDvR~~~e~-----------~~ghIpgA~~ip~~~l~-----------  175 (539)
T 1yt8_A          120 --GELVEAERHTPSLAAEEVQALLDARAEAVILDARRFDEY-----------QTMSIPGGISVPGAELV-----------  175 (539)
T ss_dssp             --HHHHHHHHCCCEECHHHHHHHHHTTCSEEEEECSCHHHH-----------HHSBCTTCEECCGGGHH-----------
T ss_pred             --hhhhhhhcCCCccCHHHHHHHHhCCCCcEEEeCCCHHHH-----------hcCcCCCCEeCCHHHHH-----------
Confidence              122222334558999999998875 56899999999999           57999999999997753           


Q ss_pred             HHHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCC-ceeeeCcHHHHhCCCCCCCccC
Q 020963          257 LKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHD-VAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       257 l~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~-v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                        ..+.+.+++++++||+||.+|.||+.+++.|..+||++ |+.+.|||.+|..++ +|++++
T Consensus       176 --~~~~~l~~~~d~~iV~~C~~g~rs~~~~~~L~~~G~~~~v~~l~gG~~~W~~~g-~p~~~~  235 (539)
T 1yt8_A          176 --LRVAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLAG-QQLEHG  235 (539)
T ss_dssp             --HHHHHHCCSTTSEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHHHHHHHTT-CCCBCS
T ss_pred             --HHHHhhCCCCCCeEEEECCCChHHHHHHHHHHHcCCCcceeeccCCHHHHHhCC-CCceeC
Confidence              23456688999999999999999999999999999998 689999999999995 999864

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=100.00  E-value=8e-39  Score=310.33  Aligned_cols=204  Identities=23%  Similarity=0.307  Sum_probs=179.0

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      ..+.|+++||.+++++ + +|||||         +..+|..||||||+|+|+..                .|.+.+..++
T Consensus       271 ~~~~is~~~l~~~l~~-~-~iiD~R---------~~~~y~~ghIpGA~~i~~~~----------------~~~~~~~~l~  323 (474)
T 3tp9_A          271 ERVDLPPERVRAWREG-G-VVLDVR---------PADAFAKRHLAGSLNIPWNK----------------SFVTWAGWLL  323 (474)
T ss_dssp             EECCCCGGGHHHHHHT-S-EEEECS---------CHHHHHHSEETTCEECCSST----------------THHHHHHHHC
T ss_pred             CCceeCHHHHHHHhCC-C-EEEECC---------ChHHHhccCCCCeEEECcch----------------HHHHHHHhcC
Confidence            3568999999999987 4 999999         78999999999999999853                4666777777


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  179 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (319)
                       +++++|||||..+.  +.+++|.|+.+||++|+++.+|+.+|..++.++....                          
T Consensus       324 -~~~~~vvvy~~~~~--~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~--------------------------  374 (474)
T 3tp9_A          324 -PADRPIHLLAADAI--APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYA--------------------------  374 (474)
T ss_dssp             -CSSSCEEEECCTTT--HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCE--------------------------
T ss_pred             -CCCCeEEEEECCCc--HHHHHHHHHHcCCcceEEecCcHHHHHhccccccccc--------------------------
Confidence             78899999998764  7889999999999999986569999999988777642                          


Q ss_pred             cccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 020963          180 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  259 (319)
Q Consensus       180 ~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~  259 (319)
                                 .++.+++.+.+++++++|||||++.||           ..||||||+|+|+.++...            
T Consensus       375 -----------~i~~~~l~~~~~~~~~~lvDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~------------  420 (474)
T 3tp9_A          375 -----------NVSPDEVRGALAQQGLWLLDVRNVDEW-----------AGGHLPQAHHIPLSKLAAH------------  420 (474)
T ss_dssp             -----------EECHHHHHHTTTTTCCEEEECSCHHHH-----------HHCBCTTCEECCHHHHTTT------------
T ss_pred             -----------ccCHHHHHHHhcCCCcEEEECCCHHHH-----------hcCcCCCCEECCHHHHHHH------------
Confidence                       578899999988778999999999999           6899999999999776543            


Q ss_pred             HHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          260 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                       +.  +++++++||+||++|.||+.+++.|+.+||++|++|+|||.+|..+ ++|+++
T Consensus       421 -~~--~l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~-g~p~~~  474 (474)
T 3tp9_A          421 -IH--DVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGK-GFPVEA  474 (474)
T ss_dssp             -GG--GSCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHT-TCCCBC
T ss_pred             -Hh--cCCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhC-CCCCCC
Confidence             22  5789999999999999999999999999999999999999999999 499975

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=100.00  E-value=1.5e-37  Score=305.63  Aligned_cols=212  Identities=20%  Similarity=0.251  Sum_probs=178.8

Q ss_pred             CCcccHHHHHHhcCC--CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           21 EPVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      .+.|++++|.+++++  ++++|||||         +..+|..||||||+|+|+..+.                 +.+..+
T Consensus       264 ~~~is~~~l~~~~~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~-----------------~~~~~~  317 (539)
T 1yt8_A          264 VERLDLAGLAQWQDEHDRTTYLLDVR---------TPEEYEAGHLPGSRSTPGGQLV-----------------QETDHV  317 (539)
T ss_dssp             CEEECHHHHHHHHHCTTSCEEEEECS---------CHHHHHHCBCTTCEECCHHHHH-----------------HSHHHH
T ss_pred             CceECHHHHHHHHhCCCCCeEEEECC---------CHHHHhcCCCCCCEeCCHHHHH-----------------HHHHhh
Confidence            458999999999865  379999999         7899999999999999986442                 223332


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecC-CHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCccc
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDG-GLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV  177 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~G-G~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (319)
                      ...++++|||||..|.+ +..+++.|+.+|| +|++|+| |+.+|..+|+|+...+.                       
T Consensus       318 ~~~~~~~ivv~c~~g~r-s~~aa~~L~~~G~-~v~~l~G~G~~~w~~~g~p~~~~~~-----------------------  372 (539)
T 1yt8_A          318 ASVRGARLVLVDDDGVR-ANMSASWLAQMGW-QVAVLDGLSEADFSERGAWSAPLPR-----------------------  372 (539)
T ss_dssp             CCSBTCEEEEECSSSSH-HHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSCCCCCCC-----------------------
T ss_pred             cCCCCCeEEEEeCCCCc-HHHHHHHHHHcCC-eEEEecCCChHHHHHhhccccCCCC-----------------------
Confidence            22267999999987765 7777888999999 8999999 99999999999877531                       


Q ss_pred             CCcccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHH
Q 020963          178 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADEL  257 (319)
Q Consensus       178 ~~~~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l  257 (319)
                              ......++++++.+.+.+++++|||||++.||           +.||||||+|+|..+             |
T Consensus       373 --------~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~-------------l  420 (539)
T 1yt8_A          373 --------QPRADTIDPTTLADWLGEPGTRVLDFTASANY-----------AKRHIPGAAWVLRSQ-------------L  420 (539)
T ss_dssp             --------CCCCCEECHHHHHHHTTSTTEEEEECSCHHHH-----------HHCBCTTCEECCGGG-------------H
T ss_pred             --------CCcCCccCHHHHHHHhcCCCeEEEEeCCHHHh-----------hcCcCCCchhCCHHH-------------H
Confidence                    12234789999999998888999999999999           689999999999855             4


Q ss_pred             HHHHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          258 KKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       258 ~~~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      .+.+.  .++++++||+||.+|.||+.+++.|+.+||.+|++|+|||.+|..++ +|++++
T Consensus       421 ~~~l~--~l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g-~pv~~~  478 (539)
T 1yt8_A          421 KQALE--RLGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAG-LPTEDG  478 (539)
T ss_dssp             HHHHH--HHCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTT-CCCBCS
T ss_pred             HHHHH--hCCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCC-CCcccC
Confidence            44555  35789999999999999999999999999999999999999999995 999875

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.96  E-value=1.1e-30  Score=252.61  Aligned_cols=171  Identities=13%  Similarity=0.205  Sum_probs=61.7

Q ss_pred             CCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEEEcCCCc
Q 020963           35 EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGI  114 (319)
Q Consensus        35 ~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvly~~~g~  114 (319)
                      +++++|||+|         +..+|..||||||+|+|+..                .|...+..+ ++++++||+||. +.
T Consensus       294 ~~~~~ilD~R---------~~~~y~~gHIpGAv~ip~~~----------------~~~~~~~~~-~~~~~~vvly~~-~~  346 (466)
T 3r2u_A          294 NTNRLTFDLR---------SKEAYHGGHIEGTINIPYDK----------------NFINQIGWY-LNYDQEINLIGD-YH  346 (466)
T ss_dssp             CCCSEEEECS---------CHHHHHHSCCTTCEECCSST----------------THHHHHTTT-CCTTSCEEEESC-HH
T ss_pred             CCCeEEEECC---------CHHHHhhCCCCCcEECCccH----------------HHHHHHHhc-cCCCCeEEEEEC-Cc
Confidence            3478999999         78999999999999999753                345555444 478899999988 33


Q ss_pred             chhHHHHHHHHHhcCCceEE-ecCCHHHHHhCCCCcccCCCcchhhhhhhhHHHHHHHhcCcccCCcccccccCCccccC
Q 020963          115 FSAARVWWMFRVFGHDRVWV-LDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWT  193 (319)
Q Consensus       115 ~~a~~~~~~l~~~G~~~v~~-l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is  193 (319)
                       .+.+++|.|+.+||++|.. ++|+...|.         .                                     .+ 
T Consensus       347 -~a~~a~~~L~~~G~~~v~~~l~g~~~~~~---------~-------------------------------------~~-  378 (466)
T 3r2u_A          347 -LVSKATHTLQLIGYDDIAGYQLPQSKIQT---------R-------------------------------------SI-  378 (466)
T ss_dssp             -HHHHHHHHHHTTTCCCEEEEECCC-------------------------------------------------------
T ss_pred             -hHHHHHHHhhhhhcccccccccCcccccH---------H-------------------------------------HH-
Confidence             5899999999999999996 565321111         0                                     00 


Q ss_pred             HHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEE
Q 020963          194 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  273 (319)
Q Consensus       194 ~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vi  273 (319)
                         +.+.+++++++|||||++.||           ..||||||+|+|+.++..             .+.  .++++++||
T Consensus       379 ---~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~-------------~~~--~l~~~~~iv  429 (466)
T 3r2u_A          379 ---HSEDITGNESHILDVRNDNEW-----------NNGHLSQAVHVPHGKLLE-------------TDL--PFNKNDVIY  429 (466)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ---HHHHHhCCCcEEEEeCCHHHH-----------hcCcCCCCEECCHHHHHH-------------HHh--hCCCCCeEE
Confidence               344445567899999999999           689999999999977643             233  477899999


Q ss_pred             EecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          274 TACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       274 vyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      +||++|.||+.+++.|+.+||++|++|+|||.+|..
T Consensus       430 ~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~  465 (466)
T 3r2u_A          430 VHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQL  465 (466)
T ss_dssp             ------------------------------------
T ss_pred             EECCCChHHHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence            999999999999999999999999999999999975

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=99.89  E-value=4.6e-24  Score=173.03  Aligned_cols=114  Identities=20%  Similarity=0.310  Sum_probs=101.6

Q ss_pred             cccCHHHHHHHhhc--CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 020963          190 LIWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  267 (319)
Q Consensus       190 ~~is~~~l~~~~~~--~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~  267 (319)
                      ..|+++++.++++.  ++++|||||++.||           ..||||||+|||+..+..  ....+.++|++.+...+++
T Consensus        23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~~l~~--~~~~~~~~~~~~~~~~~~~   89 (139)
T 3d1p_A           23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEY-----------SIVHIPASINVPYRSHPD--AFALDPLEFEKQIGIPKPD   89 (139)
T ss_dssp             EECCHHHHHHHHHHTCTTEEEEECSCHHHH-----------HHCCCTTCEECCTTTCTT--GGGSCHHHHHHHHSSCCCC
T ss_pred             ceecHHHHHHHHhCCCCCeEEEECcCHHHH-----------hCCCCCCcEEcCHHHhhh--hccCCHHHHHHHHhccCCC
Confidence            47899999998863  57999999999999           689999999999998743  3346778899988877889


Q ss_pred             CCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          268 LEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       268 ~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      ++++|||||.+|.||..++..|+.+||.+|++|+||+.+|...+ +|+..
T Consensus        90 ~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~  138 (139)
T 3d1p_A           90 SAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHG-GDKLD  138 (139)
T ss_dssp             TTSEEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTT-GGGCC
T ss_pred             CCCeEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcC-CCCCC
Confidence            99999999999999999999999999999999999999999995 89864

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=99.89  E-value=5.9e-24  Score=163.46  Aligned_cols=99  Identities=22%  Similarity=0.377  Sum_probs=86.7

Q ss_pred             ccCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          191 IWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       191 ~is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      .||++++.+.+.+ ++++|||||++.||           ..||||||+|||++++....             .  .++++
T Consensus         3 ~Is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~~-------------~--~l~~~   56 (103)
T 3iwh_A            3 SITTDELKNKLLESKPVQIVDVRTDEET-----------AMGYIPNAKLIPMDTIPDNL-------------N--SFNKN   56 (103)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECSCHHHH-----------TTCBCTTCEECCGGGGGGCG-------------G--GCCTT
T ss_pred             CcCHHHHHHHHhCCCCeEEEECCChhHH-----------hcCccCCcccCcccchhhhh-------------h--hhcCC
Confidence            5789999887754 56999999999999           68999999999998875432             2  57889


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      ++||+||.+|.||..++..|+.+||+++ .+.||+.+|..+| +|+++
T Consensus        57 ~~ivv~C~~G~rS~~aa~~L~~~G~~~~-~l~GG~~~W~~~g-~pves  102 (103)
T 3iwh_A           57 EIYYIVCAGGVRSAKVVEYLEANGIDAV-NVEGGMHAWGDEG-LEIKS  102 (103)
T ss_dssp             SEEEEECSSSSHHHHHHHHHHTTTCEEE-EETTHHHHHCSSS-CBCCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHcCCCEE-EecChHHHHHHCC-Cccee
Confidence            9999999999999999999999999754 6899999999995 99986

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}

Probab=99.89  E-value=7.7e-24  Score=161.99  Aligned_cols=97  Identities=20%  Similarity=0.348  Sum_probs=86.6

Q ss_pred             ccCHHHHHHHh-hcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          191 IWTLEQVKRNI-EEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       191 ~is~~~l~~~~-~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      .|+++++.+.+ +.++++|||||++.||           ..||||||+|+|+..+...             +.  .++++
T Consensus         3 ~is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~-------------~~--~l~~~   56 (100)
T 3foj_A            3 SITVTELKEKILDANPVNIVDVRTDQET-----------AMGIIPGAETIPMNSIPDN-------------LN--YFNDN   56 (100)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECSCHHHH-----------TTCBCTTCEECCGGGGGGC-------------GG--GSCTT
T ss_pred             ccCHHHHHHHHhcCCCcEEEECCCHHHH-----------hcCcCCCCEECCHHHHHHH-------------HH--hCCCC
Confidence            57899999988 4567999999999999           6899999999999887543             22  56789


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCC
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPV  315 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~  315 (319)
                      ++||+||.+|.||..+++.|+.+|| +|++|+||+.+|..+| +|+
T Consensus        57 ~~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g-~pv  100 (100)
T 3foj_A           57 ETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEG-LEH  100 (100)
T ss_dssp             SEEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSSS-CBC
T ss_pred             CcEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHcC-CCC
Confidence            9999999999999999999999999 8999999999999995 886

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=99.88  E-value=5.6e-23  Score=159.45  Aligned_cols=98  Identities=20%  Similarity=0.367  Sum_probs=87.7

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .|+++++.+++++  ++|||||++.||           ..||||||+|||+.+             |.+.+.  .+++++
T Consensus         5 ~is~~el~~~l~~--~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~-------------l~~~~~--~l~~~~   56 (108)
T 3gk5_A            5 SINAADLYENIKA--YTVLDVREPFEL-----------IFGSIANSINIPISE-------------LREKWK--ILERDK   56 (108)
T ss_dssp             EECHHHHHHTTTT--CEEEECSCHHHH-----------TTCBCTTCEECCHHH-------------HHHHGG--GSCTTS
T ss_pred             EeCHHHHHHHHcC--CEEEECCCHHHH-----------hcCcCCCCEEcCHHH-------------HHHHHH--hCCCCC
Confidence            6889999998875  999999999999           689999999999955             444454  568899


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +||+||.+|.||..+++.|+.+|| +|++|+||+.+|..++ +|+++.
T Consensus        57 ~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~-~~~~~~  102 (108)
T 3gk5_A           57 KYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEG-YPVVLE  102 (108)
T ss_dssp             CEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTT-CCCBCC
T ss_pred             eEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcC-CCCCCC
Confidence            999999999999999999999999 9999999999999995 898875

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=99.88  E-value=2.3e-23  Score=166.78  Aligned_cols=112  Identities=16%  Similarity=0.243  Sum_probs=95.2

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      ..|+++++.++++ ++++|||||++.||           ..||||||+|||+..+.. .+.+.+.+.+++.+.  .++++
T Consensus        18 ~~is~~e~~~~l~-~~~~lIDvR~~~e~-----------~~ghIpgAinip~~~~~~-~~~~~~~~~~~~~~~--~l~~~   82 (129)
T 1tq1_A           18 SSVSVTVAHDLLL-AGHRYLDVRTPEEF-----------SQGHACGAINVPYMNRGA-SGMSKNTDFLEQVSS--HFGQS   82 (129)
T ss_dssp             EEEEHHHHHHHHH-HTCCEEEESCHHHH-----------HHCCBTTBEECCSCCCST-TTCCCTTTHHHHHTT--TCCTT
T ss_pred             cccCHHHHHHHhc-CCCEEEECCCHHHH-----------hcCCCCCcEECcHhhccc-ccccCCHHHHHHHHh--hCCCC
Confidence            4789999998886 46899999999999           689999999999976643 344555555666555  57899


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      ++|||||.+|.||..+++.|+.+||+||++|+|||.+|..++ +|+++
T Consensus        83 ~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~  129 (129)
T 1tq1_A           83 DNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG-LPTKA  129 (129)
T ss_dssp             SSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHT-CCCC-
T ss_pred             CeEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCC-CCCCC
Confidence            999999999999999999999999999999999999999995 99863

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=99.87  E-value=2.5e-22  Score=162.79  Aligned_cols=118  Identities=15%  Similarity=0.246  Sum_probs=101.9

Q ss_pred             CCCCCcccHHHHHHhcC--CCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 020963           18 SPKEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV   95 (319)
Q Consensus        18 ~~~~~~Is~~~l~~~l~--~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~   95 (319)
                      ......|+++++.++++  +++++|||||         +..+|..||||||+|+|+..+..      ....+.+.|.+.+
T Consensus        19 ~~~~~~is~~el~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~l~~------~~~~~~~~~~~~~   83 (139)
T 3d1p_A           19 VSNIQSYSFEDMKRIVGKHDPNVVLVDVR---------EPSEYSIVHIPASINVPYRSHPD------AFALDPLEFEKQI   83 (139)
T ss_dssp             -CCCEECCHHHHHHHHHHTCTTEEEEECS---------CHHHHHHCCCTTCEECCTTTCTT------GGGSCHHHHHHHH
T ss_pred             CCCcceecHHHHHHHHhCCCCCeEEEECc---------CHHHHhCCCCCCcEEcCHHHhhh------hccCCHHHHHHHH
Confidence            34567899999999986  3579999999         78999999999999999987633      2346678898888


Q ss_pred             HhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCccc
Q 020963           96 SALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus        96 ~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                      ...+++++++|||||..|. ++..+++.|+.+||++|++|+||+.+|.+.|+|+..
T Consensus        84 ~~~~~~~~~~ivvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~  138 (139)
T 3d1p_A           84 GIPKPDSAKELIFYCASGK-RGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD  138 (139)
T ss_dssp             SSCCCCTTSEEEEECSSSH-HHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred             hccCCCCCCeEEEECCCCc-hHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence            8778889999999998875 589999999999999999999999999999998753

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=99.87  E-value=6e-23  Score=159.21  Aligned_cols=100  Identities=23%  Similarity=0.317  Sum_probs=89.3

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .|+++++.+.+++++++|||||++.||           ..||||||+|||+..             |.+.+..  +++++
T Consensus         6 ~i~~~~l~~~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~-------------l~~~~~~--l~~~~   59 (108)
T 1gmx_A            6 CINVADAHQKLQEKEAVLVDIRDPQSF-----------AMGHAVQAFHLTNDT-------------LGAFMRD--NDFDT   59 (108)
T ss_dssp             EECHHHHHHHHHTTCCEEEECSCHHHH-----------HHCEETTCEECCHHH-------------HHHHHHH--SCTTS
T ss_pred             ccCHHHHHHHHhCCCCEEEEcCCHHHH-----------HhCCCccCEeCCHHH-------------HHHHHHh--cCCCC
Confidence            688999999988777999999999999           689999999999954             4455663  68899


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +||+||.+|.||..+++.|+.+||++|++|+||+.+|...  +|++++
T Consensus        60 ~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~--~p~~~~  105 (108)
T 1gmx_A           60 PVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ--FPAEVA  105 (108)
T ss_dssp             CEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH--CGGGEE
T ss_pred             CEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh--CCcccc
Confidence            9999999999999999999999999999999999999887  788763

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=99.86  E-value=3.5e-22  Score=153.52  Aligned_cols=100  Identities=22%  Similarity=0.405  Sum_probs=84.8

Q ss_pred             CcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           22 PVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        22 ~~Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      ..||+++|.+++.+ ++++|||||         +..+|..||||||+|+|+..+...                 +.  .+
T Consensus         2 k~Is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~~-----------------~~--~l   53 (103)
T 3iwh_A            2 KSITTDELKNKLLESKPVQIVDVR---------TDEETAMGYIPNAKLIPMDTIPDN-----------------LN--SF   53 (103)
T ss_dssp             CEECHHHHHHGGGSSSCCEEEECS---------CHHHHTTCBCTTCEECCGGGGGGC-----------------GG--GC
T ss_pred             CCcCHHHHHHHHhCCCCeEEEECC---------ChhHHhcCccCCcccCcccchhhh-----------------hh--hh
Confidence            36999999998854 469999999         789999999999999999876441                 11  24


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCccc
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                      +++++||+||.+|.+ |..++..|+..||+++ .|.||+.+|.++|+|+++
T Consensus        54 ~~~~~ivv~C~~G~r-S~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~pves  102 (103)
T 3iwh_A           54 NKNEIYYIVCAGGVR-SAKVVEYLEANGIDAV-NVEGGMHAWGDEGLEIKS  102 (103)
T ss_dssp             CTTSEEEEECSSSSH-HHHHHHHHHTTTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred             cCCCeEEEECCCCHH-HHHHHHHHHHcCCCEE-EecChHHHHHHCCCccee
Confidence            688999999988765 8899999999999765 689999999999999986

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}

Probab=99.86  E-value=3.8e-22  Score=152.54  Aligned_cols=98  Identities=17%  Similarity=0.289  Sum_probs=84.8

Q ss_pred             CcccHHHHHHhc-CCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           22 PVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        22 ~~Is~~~l~~~l-~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      +.|++++|.+++ ++++++|||||         +..+|..||||||+|+|+..+...                 +.  .+
T Consensus         2 ~~is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~~-----------------~~--~l   53 (100)
T 3foj_A            2 ESITVTELKEKILDANPVNIVDVR---------TDQETAMGIIPGAETIPMNSIPDN-----------------LN--YF   53 (100)
T ss_dssp             CEECHHHHHHGGGSSSCCEEEECS---------CHHHHTTCBCTTCEECCGGGGGGC-----------------GG--GS
T ss_pred             CccCHHHHHHHHhcCCCcEEEECC---------CHHHHhcCcCCCCEECCHHHHHHH-----------------HH--hC
Confidence            469999999999 45679999999         789999999999999999876441                 11  24


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCc
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  149 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~  149 (319)
                      +++++||+||.+|. ++.++++.|+.+|| +|++|+||+.+|.++|+|+
T Consensus        54 ~~~~~ivvyC~~g~-rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv  100 (100)
T 3foj_A           54 NDNETYYIICKAGG-RSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH  100 (100)
T ss_dssp             CTTSEEEEECSSSH-HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred             CCCCcEEEEcCCCc-hHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence            67899999998775 58999999999999 9999999999999999985

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=99.86  E-value=1.4e-22  Score=163.95  Aligned_cols=105  Identities=20%  Similarity=0.321  Sum_probs=92.2

Q ss_pred             cccCHHHHHHHhh-cCCcEEEeccCCCcccCCCCCCCCCCCc-cc--cCCCcccCcccccCCCCCCCCHHHHHHHHHHcC
Q 020963          190 LIWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRS-GH--VPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  265 (319)
Q Consensus       190 ~~is~~~l~~~~~-~~~~~liDvR~~~e~~g~~~~~~~~~~~-gh--IpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~  265 (319)
                      ..|+++++.+.++ .++++|||||++.||           .. ||  ||||+|||+..+..           ...+.  +
T Consensus        23 ~~is~~el~~~l~~~~~~~liDVR~~~E~-----------~~~gh~~IpgAinip~~~l~~-----------~~~~~--~   78 (137)
T 1qxn_A           23 VMLSPKDAYKLLQENPDITLIDVRDPDEL-----------KAMGKPDVKNYKHMSRGKLEP-----------LLAKS--G   78 (137)
T ss_dssp             EEECHHHHHHHHHHCTTSEEEECCCHHHH-----------HHTCEECCSSEEECCTTTSHH-----------HHHHH--C
T ss_pred             cccCHHHHHHHHhcCCCeEEEECCCHHHH-----------HhcCCcCCCCCEEcchHHhhh-----------HHhhc--c
Confidence            4789999999987 667999999999999           57 99  99999999977632           11233  7


Q ss_pred             CCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccCC
Q 020963          266 ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  319 (319)
Q Consensus       266 ~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~~  319 (319)
                      ++++++|||||.+|.||..+++.|+.+||++|++|+||+.+|..++ +|+++++
T Consensus        79 l~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~~~  131 (137)
T 1qxn_A           79 LDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEG-LPSLDRS  131 (137)
T ss_dssp             CCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTT-CCEECCC
T ss_pred             CCCCCeEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCC-CCccccc
Confidence            8899999999999999999999999999999999999999999995 9998753

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=99.86  E-value=1.1e-21  Score=180.51  Aligned_cols=121  Identities=17%  Similarity=0.308  Sum_probs=107.3

Q ss_pred             cCCccccCHHHHHHHhhcCCcEEEeccCCCc-ccCCCCCCCCCCCccccCCCcccCccc-ccCC-CCCCCCHHHHHHHHH
Q 020963          186 FQPHLIWTLEQVKRNIEEGTYQLVDARSKAR-FDGDAPEPRKGIRSGHVPGSKCIPFPQ-MLDA-SQTLLPADELKKRFE  262 (319)
Q Consensus       186 ~~~~~~is~~~l~~~~~~~~~~liDvR~~~e-~~g~~~~~~~~~~~ghIpgA~~ip~~~-l~~~-~~~~~~~~~l~~~l~  262 (319)
                      .++...|+++||.+++++++++|||||+..+ |           ..||||||+|||+.. +.+. .+.+.+.++|++.+.
T Consensus        36 ~~~~~~is~~~l~~~l~~~~~~iiDvR~~~e~y-----------~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~  104 (318)
T 3hzu_A           36 AHPERLVTADWLSAHMGAPGLAIVESDEDVLLY-----------DVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMD  104 (318)
T ss_dssp             SSGGGEECHHHHHHHTTCTTEEEEECCSSTTSG-----------GGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHH
T ss_pred             CCCCceecHHHHHHhccCCCEEEEECCCChhHH-----------hcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHH
Confidence            4456789999999999888899999999876 8           689999999999864 3322 356788999999999


Q ss_pred             HcCCCCCCCEEEecCCcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          263 QEGISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       263 ~~~~~~~~~vivyC~~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      .++++++++|||||.+|. +|..+++.|+.+||++|++|+||+.+|..++ +|++++
T Consensus       105 ~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g-~p~~~~  160 (318)
T 3hzu_A          105 RKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAER-RETTLD  160 (318)
T ss_dssp             HTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTT-CCCBCC
T ss_pred             HcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcC-CCcccC
Confidence            999999999999999887 9999999999999999999999999999995 999874

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A

Probab=99.86  E-value=1.5e-22  Score=164.52  Aligned_cols=102  Identities=19%  Similarity=0.360  Sum_probs=88.6

Q ss_pred             ccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          191 IWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       191 ~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      .||++++.+.+..+  +++|||||++.||           ..||||||+|||+..+..             .+. .++++
T Consensus         1 mIs~~el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~~-------------~~~-~~l~~   55 (141)
T 3ilm_A            1 MSDAHVLKSRLEWGEPAFTILDVRDRSTY-----------NDGHIMGAMAMPIEDLVD-------------RAS-SSLEK   55 (141)
T ss_dssp             -CCHHHHHHHHHHSCSCEEEEECSCHHHH-----------HHCEETTCEECCGGGHHH-------------HHH-TTSCT
T ss_pred             CCCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hCCCCCCCEEcCHHHHHH-------------HHH-hcCCC
Confidence            47889999988743  5899999999999           689999999999976532             221 26889


Q ss_pred             CCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +++|||||.+|.||..+++.|+.+||++|++|+||+.+|..++ +|++++
T Consensus        56 ~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~~  104 (141)
T 3ilm_A           56 SRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIG-GPTEGI  104 (141)
T ss_dssp             TSEEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHTT-CCEEEE
T ss_pred             CCeEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHCC-CCcccC
Confidence            9999999999999999999999999999999999999999995 999864

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=99.86  E-value=1.6e-22  Score=163.73  Aligned_cols=107  Identities=19%  Similarity=0.257  Sum_probs=89.3

Q ss_pred             cccCHHHHHHHhh--cCCcEEEeccCCCcccCCCCCCCCCCCc-cccCCCcccCcccccC---CCCCCCCHHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRS-GHVPGSKCIPFPQMLD---ASQTLLPADELKKRFEQ  263 (319)
Q Consensus       190 ~~is~~~l~~~~~--~~~~~liDvR~~~e~~g~~~~~~~~~~~-ghIpgA~~ip~~~l~~---~~~~~~~~~~l~~~l~~  263 (319)
                      ..|+++++.++++  .++++|||||++.||           .. ||||||+|||+..+..   ....+          ..
T Consensus        22 ~~is~~~l~~~l~~~~~~~~liDvR~~~e~-----------~~~ghIpgA~~ip~~~l~~~~~~~~~~----------~~   80 (139)
T 2hhg_A           22 ETLTTADAIALHKSGASDVVIVDIRDPREI-----------ERDGKIPGSFSCTRGMLEFWIDPQSPY----------AK   80 (139)
T ss_dssp             EEECHHHHHHHHHTTCTTEEEEECSCHHHH-----------HHHCCCTTCEECCGGGHHHHHCTTSTT----------CC
T ss_pred             CccCHHHHHHHHhccCCCeEEEECCCHHHH-----------HhCCCCCCeEECChHHHHHhcCccchh----------hh
Confidence            4789999999988  567999999999999           57 9999999999987632   11100          01


Q ss_pred             cCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          264 EGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       264 ~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      .+++++++|||||.+|.||..+++.|+.+||.||++|+||+.+|..++ +|++++
T Consensus        81 ~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~~  134 (139)
T 2hhg_A           81 PIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAG-GPIEAW  134 (139)
T ss_dssp             GGGGSSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTT-CCCC--
T ss_pred             ccCCCCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCC-CCeecC
Confidence            146789999999999999999999999999999999999999999995 999875

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A

Probab=99.86  E-value=4.3e-22  Score=162.46  Aligned_cols=102  Identities=23%  Similarity=0.314  Sum_probs=89.9

Q ss_pred             cccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 020963          190 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  267 (319)
Q Consensus       190 ~~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~  267 (319)
                      ..|+++++.+.+.++  +++|||||++.||           ..||||||+|||+.++....            +.  +++
T Consensus        16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey-----------~~ghIpgAinip~~~l~~~~------------~~--~l~   70 (144)
T 3nhv_A           16 YETDIADLSIDIKKGYEGIIVVDVRDAEAY-----------KECHIPTAISIPGNKINEDT------------TK--RLS   70 (144)
T ss_dssp             TEEEHHHHHHHHHTTCCSEEEEECSCHHHH-----------HHCBCTTCEECCGGGCSTTT------------TT--TCC
T ss_pred             cccCHHHHHHHHHcCCCCEEEEECcCHHHH-----------hcCCCCCCEECCHHHHhHHH------------Hh--hCC
Confidence            368999999998765  7999999999999           68999999999999876421            11  678


Q ss_pred             CCCCEEEecCCc--HHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          268 LEKPVVTACGTG--VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       268 ~~~~vivyC~~G--~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++++|||||.+|  .||..+++.|+.+|| +|++|+||+.+|..++ +|++++
T Consensus        71 ~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g-~pv~~~  121 (144)
T 3nhv_A           71 KEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKEN-GEVEGT  121 (144)
T ss_dssp             TTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTT-CCCBSS
T ss_pred             CCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCC-CCccCC
Confidence            999999999999  799999999999999 5999999999999995 999875

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=99.85  E-value=7.1e-22  Score=178.44  Aligned_cols=117  Identities=17%  Similarity=0.309  Sum_probs=105.1

Q ss_pred             cccCHHHHHHHhhcCCcEEEecc----------CCCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCCHH
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDAR----------SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPAD  255 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR----------~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~~  255 (319)
                      ..|+++++.+++++++++|||||          +..+|           ..||||||+|+|+..+.+..    +.+.+.+
T Consensus         4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~-----------~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~   72 (280)
T 1urh_A            4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEY-----------LNGHIPGAVFFDIEALSDHTSPLPHMLPRPE   72 (280)
T ss_dssp             CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHH-----------HHSBCTTCEECCGGGGSCSSSSSSSCCCCHH
T ss_pred             ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhh-----------hhCcCCCCEECCHHHhcCCCCCCCCCCCCHH
Confidence            47899999999987789999999          55677           68999999999999876543    3577889


Q ss_pred             HHHHHHHHcCCCCCCCEEEecCCcHH-HHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          256 ELKKRFEQEGISLEKPVVTACGTGVT-ACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       256 ~l~~~l~~~~~~~~~~vivyC~~G~r-a~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +|++.+..++++++++|||||.+|.+ |..+++.|+.+||++|++|+||+.+|..++ +|++++
T Consensus        73 ~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~~  135 (280)
T 1urh_A           73 TFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDD-LLLEEG  135 (280)
T ss_dssp             HHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTT-CCCBBS
T ss_pred             HHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCC-CcccCC
Confidence            99999999999999999999999998 999999999999999999999999999995 999875

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=99.85  E-value=1e-21  Score=152.24  Aligned_cols=102  Identities=21%  Similarity=0.286  Sum_probs=88.9

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      .+.|+++++.+++++++++|||||         +..+|..||||||+|+|+..                 |.+.+..  +
T Consensus         4 ~~~i~~~~l~~~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~-----------------l~~~~~~--l   55 (108)
T 1gmx_A            4 FECINVADAHQKLQEKEAVLVDIR---------DPQSFAMGHAVQAFHLTNDT-----------------LGAFMRD--N   55 (108)
T ss_dssp             CEEECHHHHHHHHHTTCCEEEECS---------CHHHHHHCEETTCEECCHHH-----------------HHHHHHH--S
T ss_pred             ccccCHHHHHHHHhCCCCEEEEcC---------CHHHHHhCCCccCEeCCHHH-----------------HHHHHHh--c
Confidence            468999999999987779999999         78999999999999999864                 3444555  5


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccC
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  152 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~  152 (319)
                      +++++||+||..|. ++.++++.|+.+||++|++|+||+.+|.+. +|++..
T Consensus        56 ~~~~~ivvyc~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~  105 (108)
T 1gmx_A           56 DFDTPVMVMCYHGN-SSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVA  105 (108)
T ss_dssp             CTTSCEEEECSSSS-HHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEE
T ss_pred             CCCCCEEEEcCCCc-hHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCcccc
Confidence            78899999999876 589999999999999999999999999998 998764

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}

Probab=99.85  E-value=1.2e-22  Score=158.11  Aligned_cols=99  Identities=19%  Similarity=0.228  Sum_probs=83.6

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .|+++++    ..++++|||||++.||           ..||||||+|+|+.++.             ..+...++++++
T Consensus         6 ~is~~el----~~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~-------------~~~~~~~~~~~~   57 (110)
T 2k0z_A            6 AISLEEV----NFNDFIVVDVRELDEY-----------EELHLPNATLISVNDQE-------------KLADFLSQHKDK   57 (110)
T ss_dssp             EEETTTC----CGGGSEEEEEECHHHH-----------HHSBCTTEEEEETTCHH-------------HHHHHHHSCSSS
T ss_pred             eeCHHHh----ccCCeEEEECCCHHHH-----------hcCcCCCCEEcCHHHHH-------------HHHHhcccCCCC
Confidence            3455554    2356999999999999           68999999999997652             234434688999


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccCC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETSS  319 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~~  319 (319)
                      +||+||.+|.||..+++.|+.+||++ ++|+||+.+|..++ +|++++.
T Consensus        58 ~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g-~p~~~~~  104 (110)
T 2k0z_A           58 KVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVYDFEKYG-FRMVYDD  104 (110)
T ss_dssp             CEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTT-CCCBCCC
T ss_pred             EEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHHHHHHCC-CcEecCC
Confidence            99999999999999999999999999 99999999999995 9998763

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A

Probab=99.85  E-value=3.3e-22  Score=154.57  Aligned_cols=97  Identities=19%  Similarity=0.377  Sum_probs=77.6

Q ss_pred             HHHHHhh--cCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEE
Q 020963          196 QVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  273 (319)
Q Consensus       196 ~l~~~~~--~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vi  273 (319)
                      +|.+.+.  .++++|||||++.||           ..||||||+|||+.++..            ....  .++++++||
T Consensus         2 el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~~------------~~~~--~l~~~~~iv   56 (106)
T 3hix_A            2 VLKSRLEWGEPAFTILDVRDRSTY-----------NDGHIMGAMAMPIEDLVD------------RASS--SLEKSRDIY   56 (106)
T ss_dssp             -----------CCEEEECSCHHHH-----------HTCEETTCEECCGGGHHH------------HHHH--HSCTTSCEE
T ss_pred             hHHHHHHcCCCCeEEEECCCHHHH-----------hcCcCCCCEeCCHHHHHH------------HHHh--cCCCCCeEE
Confidence            3455554  346999999999999           689999999999977532            1123  567899999


Q ss_pred             EecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          274 TACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       274 vyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      |||.+|.||..+++.|+.+||+||++|+||+.+|..++ +|+++.
T Consensus        57 vyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g-~~~~~~  100 (106)
T 3hix_A           57 VYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIG-GPTELE  100 (106)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCSCEEECTTHHHHHHHTT-CCEEEC
T ss_pred             EEECCCChHHHHHHHHHHcCCcCEEEecCCHHHHHHCC-CCCCCC
Confidence            99999999999999999999999999999999999995 998764

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=99.85  E-value=2.3e-21  Score=150.36  Aligned_cols=102  Identities=19%  Similarity=0.246  Sum_probs=87.4

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      .+.|++++|.+++++  ++|||||         +..+|..||||||+|+|+..+                 .+.+..  +
T Consensus         3 ~~~is~~el~~~l~~--~~iiDvR---------~~~e~~~ghIpgA~~ip~~~l-----------------~~~~~~--l   52 (108)
T 3gk5_A            3 YRSINAADLYENIKA--YTVLDVR---------EPFELIFGSIANSINIPISEL-----------------REKWKI--L   52 (108)
T ss_dssp             CCEECHHHHHHTTTT--CEEEECS---------CHHHHTTCBCTTCEECCHHHH-----------------HHHGGG--S
T ss_pred             ccEeCHHHHHHHHcC--CEEEECC---------CHHHHhcCcCCCCEEcCHHHH-----------------HHHHHh--C
Confidence            457999999999987  9999999         789999999999999998644                 333333  4


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCC
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      +++++||+||.+|.+ +.++++.|+.+|| +|++|+||+.+|.++|+|+++..+
T Consensus        53 ~~~~~ivvyC~~G~r-s~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~  104 (108)
T 3gk5_A           53 ERDKKYAVICAHGNR-SAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH  104 (108)
T ss_dssp             CTTSCEEEECSSSHH-HHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred             CCCCeEEEEcCCCcH-HHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence            678999999987764 8999999999999 999999999999999999998753

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=99.85  E-value=1.8e-21  Score=155.83  Aligned_cols=115  Identities=20%  Similarity=0.194  Sum_probs=92.8

Q ss_pred             CCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHh
Q 020963           18 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA   97 (319)
Q Consensus        18 ~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~   97 (319)
                      ......|+++++.++++ ++++|||||         +..+|..||||||+|||+..+..     ...+.+.+.+.+.+. 
T Consensus        14 ~~~~~~is~~e~~~~l~-~~~~lIDvR---------~~~e~~~ghIpgAinip~~~~~~-----~~~~~~~~~~~~~~~-   77 (129)
T 1tq1_A           14 SRVPSSVSVTVAHDLLL-AGHRYLDVR---------TPEEFSQGHACGAINVPYMNRGA-----SGMSKNTDFLEQVSS-   77 (129)
T ss_dssp             SCCCEEEEHHHHHHHHH-HTCCEEEES---------CHHHHHHCCBTTBEECCSCCCST-----TTCCCTTTHHHHHTT-
T ss_pred             cCCCcccCHHHHHHHhc-CCCEEEECC---------CHHHHhcCCCCCcEECcHhhccc-----ccccCCHHHHHHHHh-
Confidence            34467899999999987 468999999         78999999999999999866532     122333334444433 


Q ss_pred             CCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcc
Q 020963           98 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  150 (319)
Q Consensus        98 ~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~  150 (319)
                       .++++++|||||..|. ++..+++.|+.+||++|++|+||+.+|..+|+|++
T Consensus        78 -~l~~~~~ivvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~  128 (129)
T 1tq1_A           78 -HFGQSDNIIVGCQSGG-RSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK  128 (129)
T ss_dssp             -TCCTTSSEEEEESSCS-HHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred             -hCCCCCeEEEECCCCc-HHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence             3578899999999876 48999999999999999999999999999999985

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=99.85  E-value=9.1e-22  Score=148.67  Aligned_cols=92  Identities=18%  Similarity=0.292  Sum_probs=75.9

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .|+++++.+.+++ +++|||||++.||           ..||||||+|+|+.++.....               .+++ +
T Consensus         3 ~is~~~l~~~~~~-~~~liDvR~~~e~-----------~~ghi~gAi~ip~~~l~~~~~---------------~l~~-~   54 (94)
T 1wv9_A            3 KVRPEELPALLEE-GVLVVDVRPADRR-----------STPLPFAAEWVPLEKIQKGEH---------------GLPR-R   54 (94)
T ss_dssp             EECGGGHHHHHHT-TCEEEECCCC--C-----------CSCCSSCCEECCHHHHTTTCC---------------CCCS-S
T ss_pred             cCCHHHHHHHHHC-CCEEEECCCHHHH-----------hcccCCCCEECCHHHHHHHHH---------------hCCC-C
Confidence            4677888888765 7899999999999           689999999999988754322               5678 9


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                      +||+||.+|.||..+++.|+.+||+ |++|+||+.+|..+|
T Consensus        55 ~ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G   94 (94)
T 1wv9_A           55 PLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQGK   94 (94)
T ss_dssp             CEEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred             CEEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence            9999999999999999999999999 999999999998763

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=99.84  E-value=5.6e-22  Score=162.47  Aligned_cols=113  Identities=22%  Similarity=0.204  Sum_probs=88.5

Q ss_pred             ccCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCCc-ccc------CCCcccCcccccCCCCCCC--CHHHHHHH
Q 020963          191 IWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRS-GHV------PGSKCIPFPQMLDASQTLL--PADELKKR  260 (319)
Q Consensus       191 ~is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~~-ghI------pgA~~ip~~~l~~~~~~~~--~~~~l~~~  260 (319)
                      .|+++++.++++. ++++|||||++.||           .. |||      |||+|||+.+ .+.  .+.  ..+++.+.
T Consensus         6 ~is~~el~~~l~~~~~~~liDVR~~~e~-----------~~~ghi~~~g~~pgAv~ip~~~-~~~--~~~~~~~~~l~~~   71 (148)
T 2fsx_A            6 DITPLQAWEMLSDNPRAVLVDVRCEAEW-----------RFVGVPDLSSLGREVVYVEWAT-SDG--THNDNFLAELRDR   71 (148)
T ss_dssp             EECHHHHHHHHHHCTTCEEEECSCHHHH-----------HHTCEECCGGGTCCCEECCSBC-TTS--CBCTTHHHHHHHH
T ss_pred             cCCHHHHHHHHhcCCCeEEEECCCHHHH-----------HhcCCCccccCCCCcEEeeeec-ccc--ccCHHHHHHHHHH
Confidence            5889999998874 68999999999999           44 899      9999999987 321  111  13556666


Q ss_pred             HHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcH------------HHHhCCCCCCCccC
Q 020963          261 FEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSW------------TEWGAQPDTPVETS  318 (319)
Q Consensus       261 l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~------------~~W~~~~~~p~~~~  318 (319)
                      +.+.+++++++|||||++|.||..+++.|+.+||.+|++|+||+            .+|..+| +|++++
T Consensus        72 l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~g-lp~~~~  140 (148)
T 2fsx_A           72 IPADADQHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVG-LPWRQG  140 (148)
T ss_dssp             CC-------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTT-CSEECC
T ss_pred             HhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcC-CCCCcc
Confidence            65567899999999999999999999999999999999999999            6899995 999864

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=99.84  E-value=3.5e-21  Score=173.07  Aligned_cols=117  Identities=22%  Similarity=0.319  Sum_probs=106.1

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCCHHHHHHHHHHcC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQEG  265 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~~~l~~~l~~~~  265 (319)
                      ..|+++++.+++++++++|||||++.+|           ..||||||+|+|+..+....    +.+.+.+.|.+++..++
T Consensus         9 ~~is~~~l~~~l~~~~~~iiDvR~~~ey-----------~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g   77 (271)
T 1e0c_A            9 LVIEPADLQARLSAPELILVDLTSAARY-----------AEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELG   77 (271)
T ss_dssp             SEECHHHHHTTTTCTTEEEEECSCHHHH-----------HHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHT
T ss_pred             ceeeHHHHHHhccCCCeEEEEcCCcchh-----------hhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcC
Confidence            3789999999997778999999999999           68999999999999876542    46778899999999999


Q ss_pred             CCCCCCEEEecCCcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          266 ISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       266 ~~~~~~vivyC~~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++++++|||||.+|. +|..+++.|+.+||++|++|+||+.+|..++ +|++++
T Consensus        78 i~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g-~p~~~~  130 (271)
T 1e0c_A           78 HRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAED-RPLSRE  130 (271)
T ss_dssp             CCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTT-CCCBCC
T ss_pred             CCCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcC-CCccCC
Confidence            999999999999987 9999999999999999999999999999995 999875

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=99.84  E-value=5.9e-21  Score=154.35  Aligned_cols=107  Identities=18%  Similarity=0.271  Sum_probs=91.7

Q ss_pred             CCCcccHHHHHHhcC-CCCeEEEEeecCCCCCCCCchhhhhh-cC--CcCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 020963           20 KEPVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQV-AH--IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV   95 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~~~~~-gh--IpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~   95 (319)
                      ....|++++|.++++ +++++|||||         +..+|.. ||  ||||+|+|+..+..               ...+
T Consensus        21 ~~~~is~~el~~~l~~~~~~~liDVR---------~~~E~~~~gh~~IpgAinip~~~l~~---------------~~~~   76 (137)
T 1qxn_A           21 DMVMLSPKDAYKLLQENPDITLIDVR---------DPDELKAMGKPDVKNYKHMSRGKLEP---------------LLAK   76 (137)
T ss_dssp             SSEEECHHHHHHHHHHCTTSEEEECC---------CHHHHHHTCEECCSSEEECCTTTSHH---------------HHHH
T ss_pred             cCcccCHHHHHHHHhcCCCeEEEECC---------CHHHHHhcCCcCCCCCEEcchHHhhh---------------HHhh
Confidence            356899999999997 6679999999         7899999 99  99999999876532               0112


Q ss_pred             HhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963           96 SALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        96 ~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                        .+++++++|||||.+|.+ +.++++.|+.+||++|++|+||+.+|.++|+|+....
T Consensus        77 --~~l~~~~~ivvyC~~G~r-S~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  131 (137)
T 1qxn_A           77 --SGLDPEKPVVVFCKTAAR-AALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS  131 (137)
T ss_dssp             --HCCCTTSCEEEECCSSSC-HHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCC
T ss_pred             --ccCCCCCeEEEEcCCCcH-HHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccccc
Confidence              246789999999998875 8999999999999999999999999999999998764

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A

Probab=99.84  E-value=1.2e-20  Score=153.90  Aligned_cols=105  Identities=21%  Similarity=0.314  Sum_probs=90.4

Q ss_pred             CCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           21 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      ...||+++|.++++++  +++|||||         +..+|..||||||+|+|+..+...                  ...
T Consensus        15 ~~~is~~el~~~l~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~~------------------~~~   67 (144)
T 3nhv_A           15 SYETDIADLSIDIKKGYEGIIVVDVR---------DAEAYKECHIPTAISIPGNKINED------------------TTK   67 (144)
T ss_dssp             HTEEEHHHHHHHHHTTCCSEEEEECS---------CHHHHHHCBCTTCEECCGGGCSTT------------------TTT
T ss_pred             CcccCHHHHHHHHHcCCCCEEEEECc---------CHHHHhcCCCCCCEECCHHHHhHH------------------HHh
Confidence            3579999999999764  79999999         789999999999999999876431                  012


Q ss_pred             CCCCCCeEEEEcCCCc-chhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963           99 GLENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~-~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      +++++++|||||..|. .++.++++.|+.+|| +|++|+||+.+|.++|+|+++..
T Consensus        68 ~l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~  122 (144)
T 3nhv_A           68 RLSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTL  122 (144)
T ss_dssp             TCCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSS
T ss_pred             hCCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCC
Confidence            4678899999999874 569999999999999 69999999999999999999875

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A

Probab=99.83  E-value=2.7e-21  Score=149.43  Aligned_cols=100  Identities=28%  Similarity=0.424  Sum_probs=76.8

Q ss_pred             HHHHHhcCC--CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCC
Q 020963           27 DWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKD  104 (319)
Q Consensus        27 ~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  104 (319)
                      ++|.++++.  ++++|||||         +..+|..||||||+|+|+..+..             .   .+..  +++++
T Consensus         1 eel~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~~-------------~---~~~~--l~~~~   53 (106)
T 3hix_A            1 MVLKSRLEWGEPAFTILDVR---------DRSTYNDGHIMGAMAMPIEDLVD-------------R---ASSS--LEKSR   53 (106)
T ss_dssp             ------------CCEEEECS---------CHHHHHTCEETTCEECCGGGHHH-------------H---HHHH--SCTTS
T ss_pred             ChHHHHHHcCCCCeEEEECC---------CHHHHhcCcCCCCEeCCHHHHHH-------------H---HHhc--CCCCC
Confidence            467788873  469999999         78999999999999999875422             1   1122  56788


Q ss_pred             eEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCC
Q 020963          105 GLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus       105 ~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      +|||||..|.+ +.++++.|+.+||++|++|+||+.+|.++|+|+++..+
T Consensus        54 ~ivvyc~~g~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~  102 (106)
T 3hix_A           54 DIYVYGAGDEQ-TSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH  102 (106)
T ss_dssp             CEEEECSSHHH-HHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred             eEEEEECCCCh-HHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence            99999987765 89999999999999999999999999999999998753

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=99.83  E-value=6.6e-21  Score=154.25  Aligned_cols=113  Identities=18%  Similarity=0.199  Sum_probs=89.1

Q ss_pred             CCCcccHHHHHHhcC--CCCeEEEEeecCCCCCCCCchhhhhh-cCCcCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 020963           20 KEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQV-AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS   96 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~--~~~~~iiDvR~~~~~~~r~~~~~~~~-ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~   96 (319)
                      ....|++++|.++++  +++++|||||         +..+|.. ||||||+|+|+..+........ ..          .
T Consensus        20 ~~~~is~~~l~~~l~~~~~~~~liDvR---------~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~-~~----------~   79 (139)
T 2hhg_A           20 SIETLTTADAIALHKSGASDVVIVDIR---------DPREIERDGKIPGSFSCTRGMLEFWIDPQS-PY----------A   79 (139)
T ss_dssp             TSEEECHHHHHHHHHTTCTTEEEEECS---------CHHHHHHHCCCTTCEECCGGGHHHHHCTTS-TT----------C
T ss_pred             hcCccCHHHHHHHHhccCCCeEEEECC---------CHHHHHhCCCCCCeEECChHHHHHhcCccc-hh----------h
Confidence            357899999999998  5689999999         7889999 9999999999876532100000 00          0


Q ss_pred             hCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963           97 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        97 ~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      ...++++++|||||..|. ++.++++.|+.+||++|++|+||+.+|.++|+|++...
T Consensus        80 ~~~~~~~~~ivvyC~~G~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  135 (139)
T 2hhg_A           80 KPIFQEDKKFVFYCAGGL-RSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWA  135 (139)
T ss_dssp             CGGGGSSSEEEEECSSSH-HHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC---
T ss_pred             hccCCCCCeEEEECCCCh-HHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCC
Confidence            113468899999998876 58899999999999999999999999999999998764

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A

Probab=99.83  E-value=2.9e-21  Score=156.96  Aligned_cols=103  Identities=25%  Similarity=0.421  Sum_probs=88.0

Q ss_pred             cccHHHHHHhcCC--CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           23 VVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        23 ~Is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      +||+++|.+++++  ++++|||||         +..+|..||||||+|+|+..+..                 .+ ..++
T Consensus         1 mIs~~el~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~~-----------------~~-~~~l   53 (141)
T 3ilm_A            1 MSDAHVLKSRLEWGEPAFTILDVR---------DRSTYNDGHIMGAMAMPIEDLVD-----------------RA-SSSL   53 (141)
T ss_dssp             -CCHHHHHHHHHHSCSCEEEEECS---------CHHHHHHCEETTCEECCGGGHHH-----------------HH-HTTS
T ss_pred             CCCHHHHHHHHhcCCCCEEEEECC---------CHHHHhCCCCCCCEEcCHHHHHH-----------------HH-HhcC
Confidence            5899999999974  359999999         78999999999999999875422                 21 1247


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      +++++|||||..|. ++.++++.|+.+||++|++|+||+.+|.++|+|+++..
T Consensus        54 ~~~~~ivvyC~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  105 (141)
T 3ilm_A           54 EKSRDIYVYGAGDE-QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGII  105 (141)
T ss_dssp             CTTSEEEEECSSHH-HHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC
T ss_pred             CCCCeEEEEECCCh-HHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCC
Confidence            78899999998765 58999999999999999999999999999999999875

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=99.83  E-value=2.8e-21  Score=153.57  Aligned_cols=102  Identities=20%  Similarity=0.262  Sum_probs=87.5

Q ss_pred             cccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 020963          190 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  267 (319)
Q Consensus       190 ~~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~  267 (319)
                      ..|+++++.+.++.+  +++|||||++.||.          ..||||||+|||+.++             .+.+.  .++
T Consensus        15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~----------~~ghIpgA~nip~~~l-------------~~~~~--~l~   69 (124)
T 3flh_A           15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQV----------KKDQIKGAIAMPAKDL-------------ATRIG--ELD   69 (124)
T ss_dssp             TEECHHHHHHHHHHTCCCEEEEECCCSCHHH----------HCCEETTCEECCHHHH-------------HHHGG--GSC
T ss_pred             ceecHHHHHHHHHcCCCCEEEEECCCHHHHH----------hcCcCCCCEECCHHHH-------------HHHHh--cCC
Confidence            478999999998764  49999999999972          3799999999999554             44444  678


Q ss_pred             CCCCEEEecCCcHH--HHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          268 LEKPVVTACGTGVT--ACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       268 ~~~~vivyC~~G~r--a~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++++|||||.+|.|  |..+++.|+.+||+ |++|+||+.+|...+ +|+.+.
T Consensus        70 ~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~-~p~~~~  120 (124)
T 3flh_A           70 PAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQ-LPLEHH  120 (124)
T ss_dssp             TTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTT-CCEEC-
T ss_pred             CCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcC-CCCCcc
Confidence            89999999999998  89999999999997 999999999999995 888763

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=99.83  E-value=3.5e-21  Score=174.28  Aligned_cols=118  Identities=20%  Similarity=0.377  Sum_probs=104.4

Q ss_pred             ccccCHHHHHHHhhcCCcEEEecc-CCCcccCCCCCCCCCCCccccCCCcccCccccc-CC-CCCCCCHHHHHHHHHHcC
Q 020963          189 HLIWTLEQVKRNIEEGTYQLVDAR-SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML-DA-SQTLLPADELKKRFEQEG  265 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~~~~liDvR-~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~-~~-~~~~~~~~~l~~~l~~~~  265 (319)
                      ...|+++++.+++++++++||||| ++.+|           ..||||||+|+|+..++ +. .+.+.+.++|.+.+..++
T Consensus         7 ~~~is~~~l~~~l~~~~~~liDvR~~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~g   75 (285)
T 1uar_A            7 EVLVSTDWVQEHLEDPKVRVLEVDEDILLY-----------DTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLG   75 (285)
T ss_dssp             GGEECHHHHHTTTTCTTEEEEEECSSTTHH-----------HHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTT
T ss_pred             CceEcHHHHHHhcCCCCEEEEEcCCCcchh-----------hcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcC
Confidence            458999999999987789999999 68999           68999999999998533 22 246778899999999999


Q ss_pred             CCCCCCEEEecCCcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          266 ISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       266 ~~~~~~vivyC~~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++++++|||||.+|. +|..+++.|+.+||++|++|+||+.+|..++ +|++++
T Consensus        76 i~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~~  128 (285)
T 1uar_A           76 ISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEG-RPLTTE  128 (285)
T ss_dssp             CCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHT-CCCBCC
T ss_pred             CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCC-CcccCC
Confidence            999999999999998 7999999999999999999999999999995 898864

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=99.82  E-value=1.3e-20  Score=169.85  Aligned_cols=117  Identities=16%  Similarity=0.327  Sum_probs=103.5

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccC-CCcccCCCCCCCCCCCccccCCCcccCcccccCC--CCCCCCHHHHHHHHHHcCC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARS-KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--SQTLLPADELKKRFEQEGI  266 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~-~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~--~~~~~~~~~l~~~l~~~~~  266 (319)
                      ..|+++++.+++++++++|||||+ +.+|           ..||||||+|||+..+...  .+.+.+.+.|.+.+..+++
T Consensus         6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi   74 (277)
T 3aay_A            6 VLVSADWAESNLHAPKVVFVEVDEDTSAY-----------DRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGI   74 (277)
T ss_dssp             HEECHHHHHTTTTCTTEEEEEEESSSHHH-----------HHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTC
T ss_pred             ceEcHHHHHHHhCCCCEEEEEcCCChhhH-----------hhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCC
Confidence            478999999998877899999998 8899           6899999999999875432  2456788999999999999


Q ss_pred             CCCCCEEEecCCcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          267 SLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       267 ~~~~~vivyC~~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +++++|||||.+|. +|..+++.|+.+||++|++|+||+.+|..++ +|++++
T Consensus        75 ~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g-~p~~~~  126 (277)
T 3aay_A           75 ANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDG-RPLSSD  126 (277)
T ss_dssp             CTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTT-CCCBCC
T ss_pred             CCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcC-CccccC
Confidence            99999999999874 7899999999999999999999999999995 999875

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}

Probab=99.82  E-value=5.2e-21  Score=148.78  Aligned_cols=101  Identities=17%  Similarity=0.277  Sum_probs=84.9

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      ...||+++|    ++++++|||||         +..+|..||||||+|+|+..+..                 .+...++
T Consensus         4 ~~~is~~el----~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~~-----------------~~~~~~~   53 (110)
T 2k0z_A            4 DYAISLEEV----NFNDFIVVDVR---------ELDEYEELHLPNATLISVNDQEK-----------------LADFLSQ   53 (110)
T ss_dssp             TTEEETTTC----CGGGSEEEEEE---------CHHHHHHSBCTTEEEEETTCHHH-----------------HHHHHHS
T ss_pred             eeeeCHHHh----ccCCeEEEECC---------CHHHHhcCcCCCCEEcCHHHHHH-----------------HHHhccc
Confidence            457888886    34579999999         78999999999999999876532                 2333457


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      +++++||+||..|. ++.++++.|+.+||++ ++|+||+.+|.++|+|++++.
T Consensus        54 ~~~~~ivvyC~~G~-rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~  104 (110)
T 2k0z_A           54 HKDKKVLLHCRAGR-RALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD  104 (110)
T ss_dssp             CSSSCEEEECSSSH-HHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred             CCCCEEEEEeCCCc-hHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence            88999999998775 5899999999999999 999999999999999998764

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=99.82  E-value=2.3e-20  Score=169.88  Aligned_cols=118  Identities=19%  Similarity=0.316  Sum_probs=104.3

Q ss_pred             ccccCHHHHHHHhhc----CCcEEEecc--------CCCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCC
Q 020963          189 HLIWTLEQVKRNIEE----GTYQLVDAR--------SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLL  252 (319)
Q Consensus       189 ~~~is~~~l~~~~~~----~~~~liDvR--------~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~  252 (319)
                      ...|+++++.+++++    ++++|||||        +..+|           ..||||||+|||+..+.+..    +.+.
T Consensus         7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey-----------~~gHIpGAi~ip~~~l~~~~~~~~~~lp   75 (296)
T 1rhs_A            7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEY-----------LERHVPGASFFDIEECRDKASPYEVMLP   75 (296)
T ss_dssp             CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHH-----------HHSBCTTCEECCTTTSSCTTSSSSSCCC
T ss_pred             CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhH-----------hhCcCCCCEEeCHHHhcCCCCCCCCCCC
Confidence            348999999999876    579999999        56788           68999999999998776542    4677


Q ss_pred             CHHHHHHHHHHcCCCCCCCEEEecCC--cHH-HHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          253 PADELKKRFEQEGISLEKPVVTACGT--GVT-ACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       253 ~~~~l~~~l~~~~~~~~~~vivyC~~--G~r-a~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +.++|++.+..++++++++|||||.+  |.+ |.++++.|+.+||++|++|+||+.+|..++ +|++++
T Consensus        76 ~~~~~~~~l~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g-~p~~~~  143 (296)
T 1rhs_A           76 SEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEG-HPVTSE  143 (296)
T ss_dssp             CHHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTT-CCCBCS
T ss_pred             CHHHHHHHHHHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcC-CccccC
Confidence            88999999999999999999999998  876 889999999999999999999999999995 999875

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=99.81  E-value=1.3e-20  Score=149.80  Aligned_cols=104  Identities=19%  Similarity=0.308  Sum_probs=86.6

Q ss_pred             CCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhh-hhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHh
Q 020963           21 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA   97 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~-~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~   97 (319)
                      ...|++++|.++++++  +++|||||         +..+| ..||||||+|+|+..+                 .+.+..
T Consensus        14 ~~~is~~el~~~l~~~~~~~~liDvR---------~~~e~~~~ghIpgA~nip~~~l-----------------~~~~~~   67 (124)
T 3flh_A           14 SLYIDHHTVLADMQNATGKYVVLDVR---------NAPAQVKKDQIKGAIAMPAKDL-----------------ATRIGE   67 (124)
T ss_dssp             TTEECHHHHHHHHHHTCCCEEEEECC---------CSCHHHHCCEETTCEECCHHHH-----------------HHHGGG
T ss_pred             cceecHHHHHHHHHcCCCCEEEEECC---------CHHHHHhcCcCCCCEECCHHHH-----------------HHHHhc
Confidence            3579999999999764  49999998         56787 9999999999998644                 333333


Q ss_pred             CCCCCCCeEEEEcCCCcch-hHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963           98 LGLENKDGLVVYDGKGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        98 ~~i~~~~~vvly~~~g~~~-a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                        ++++++|||||..|.+. +.++++.|+.+||+ |++|+||+.+|...|+|+...+
T Consensus        68 --l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~~  121 (124)
T 3flh_A           68 --LDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHHH  121 (124)
T ss_dssp             --SCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred             --CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence              56789999999988764 78999999999996 9999999999999999998764

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=99.81  E-value=2e-21  Score=154.61  Aligned_cols=108  Identities=19%  Similarity=0.215  Sum_probs=84.3

Q ss_pred             ccCHHHHHHHhhcC-CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH----HcC
Q 020963          191 IWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE----QEG  265 (319)
Q Consensus       191 ~is~~~l~~~~~~~-~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~----~~~  265 (319)
                      .||++++.+++.++ +++|||||++.||           ..||||||+|||+..+......+  ...+.+.+.    +.+
T Consensus         2 ~is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~--~~~~~~~l~~~~~~~~   68 (127)
T 3i2v_A            2 RVSVTDYKRLLDSGAFHLLLDVRPQVEV-----------DICRLPHALHIPLKHLERRDAES--LKLLKEAIWEEKQGTQ   68 (127)
T ss_dssp             EECHHHHHHHHHHTCCCEEEECSCHHHH-----------HHCCCTTSEECCHHHHHTTCHHH--HHHHHHHHHHHHTTC-
T ss_pred             CCCHHHHHHHHhCCCCeEEEECCCHHHh-----------hheecCCceeCChHHHhhhhhhh--HHHHHHHHhhhccccc
Confidence            47899999988765 5999999999999           68999999999998876533211  011222222    235


Q ss_pred             CCCCCCEEEecCCcHHHHHHHHHHHhc------CCCCceeeeCcHHHHhCCC
Q 020963          266 ISLEKPVVTACGTGVTACILALGLNRL------GKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       266 ~~~~~~vivyC~~G~ra~~~~~~L~~~------G~~~v~~~~Gg~~~W~~~~  311 (319)
                      ++++++||+||.+|.||..+++.|+.+      |+.+|++|+|||.+|..+.
T Consensus        69 ~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~  120 (127)
T 3i2v_A           69 EGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKI  120 (127)
T ss_dssp             --CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHT
T ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhc
Confidence            677889999999999999999999988      6889999999999999874

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=99.81  E-value=3.8e-20  Score=169.00  Aligned_cols=117  Identities=21%  Similarity=0.321  Sum_probs=102.3

Q ss_pred             cccCHHHHHHHhhcC----CcEEEecc---------CCCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCC
Q 020963          190 LIWTLEQVKRNIEEG----TYQLVDAR---------SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLL  252 (319)
Q Consensus       190 ~~is~~~l~~~~~~~----~~~liDvR---------~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~  252 (319)
                      .+|+++||.++++++    +++|||||         +..+|           ..||||||+|||+..+.+..    +.+.
T Consensus        22 ~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey-----------~~gHIpGAi~i~~~~~~~~~~~~~~~lp   90 (302)
T 3olh_A           22 SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREF-----------EERHIPGAAFFDIDQCSDRTSPYDHMLP   90 (302)
T ss_dssp             CEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHH-----------HHSCCTTCEECCTTTSSCSSCSSSSCCC
T ss_pred             CccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHH-----------hhCcCCCCeEeCHHHhcCcCCCCCCCCC
Confidence            489999999999865    89999999         67788           68999999999998875543    3567


Q ss_pred             CHHHHHHHHHHcCCCCCCCEEEecCC---cHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          253 PADELKKRFEQEGISLEKPVVTACGT---GVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       253 ~~~~l~~~l~~~~~~~~~~vivyC~~---G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +.+.|.+.+..++++++++|||||.+   +.+|+++++.|+.+||++|++|+||+.+|..++ +|++++
T Consensus        91 ~~~~~~~~~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g-~p~~~~  158 (302)
T 3olh_A           91 GAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQN-LPLSSG  158 (302)
T ss_dssp             CHHHHHHHHHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSC-CC-CCS
T ss_pred             CHHHHHHHHHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcC-CCcccC
Confidence            88999999999999999999999963   457999999999999999999999999999995 998875

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=99.81  E-value=1.6e-20  Score=139.02  Aligned_cols=80  Identities=20%  Similarity=0.311  Sum_probs=71.5

Q ss_pred             CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEecCCcHHHHH
Q 020963          205 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACI  284 (319)
Q Consensus       205 ~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vivyC~~G~ra~~  284 (319)
                      +++|||||++.||           ..||||||+|+|+.+             +.+.+...+++++++||+||.+|.||..
T Consensus         1 ~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~-------------l~~~~~~l~~~~~~~ivv~C~~g~rs~~   56 (85)
T 2jtq_A            1 AEHWIDVRVPEQY-----------QQEHVQGAINIPLKE-------------VKERIATAVPDKNDTVKVYCNAGRQSGQ   56 (85)
T ss_dssp             CEEEEECSCHHHH-----------TTEEETTCEECCHHH-------------HHHHHHHHCCCTTSEEEEEESSSHHHHH
T ss_pred             CCEEEECCCHHHH-----------HhCCCCCCEEcCHHH-------------HHHHHHHhCCCCCCcEEEEcCCCchHHH
Confidence            3689999999999           689999999999954             4556776778999999999999999999


Q ss_pred             HHHHHHhcCCCCceeeeCcHHHHhC
Q 020963          285 LALGLNRLGKHDVAVYDGSWTEWGA  309 (319)
Q Consensus       285 ~~~~L~~~G~~~v~~~~Gg~~~W~~  309 (319)
                      +++.|+.+||++++++ |||.+|..
T Consensus        57 aa~~L~~~G~~~v~~l-GG~~~w~~   80 (85)
T 2jtq_A           57 AKEILSEMGYTHVENA-GGLKDIAM   80 (85)
T ss_dssp             HHHHHHHTTCSSEEEE-EETTTCCS
T ss_pred             HHHHHHHcCCCCEEec-cCHHHHhc
Confidence            9999999999999999 99999953

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1

Probab=99.80  E-value=8.3e-20  Score=150.19  Aligned_cols=110  Identities=21%  Similarity=0.318  Sum_probs=88.9

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           19 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      .....|++++|.+++++++++|||||         +..+|..||||||+|||+..+..             .+.+++.. 
T Consensus        25 ~~~~~Is~~el~~~l~~~~~~lIDvR---------~~~ey~~ghIpgAinip~~~l~~-------------~~~~l~~~-   81 (152)
T 1t3k_A           25 RSISYITSTQLLPLHRRPNIAIIDVR---------DEERNYDGHIAGSLHYASGSFDD-------------KISHLVQN-   81 (152)
T ss_dssp             SSSEEECTTTTTTCCCCTTEEEEEES---------CSHHHHSSCCCSSEEECCSSSST-------------THHHHHHT-
T ss_pred             CCCceECHHHHHHHhcCCCEEEEECC---------ChhhccCccCCCCEECCHHHHHH-------------HHHHHHHh-
Confidence            44678999999999987789999999         67899999999999999987643             34444443 


Q ss_pred             CCCCCCeEEEEcC-CCcchhHHHHHHH--------HHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963           99 GLENKDGLVVYDG-KGIFSAARVWWMF--------RVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        99 ~i~~~~~vvly~~-~g~~~a~~~~~~l--------~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                       ++++++|||||. .|.+ +..++..|        +.+||++|++|+||+.+|.++|+|+++..
T Consensus        82 -~~~~~~iVvyC~~~G~r-s~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~  143 (152)
T 1t3k_A           82 -VKDKDTLVFHSALSQVR-GPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCA  143 (152)
T ss_dssp             -CCSCCEEEESSSCCSSS-HHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCS
T ss_pred             -cCCCCEEEEEcCCCCcc-hHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCC
Confidence             357889999998 6654 55555444        44899999999999999999999998864

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1

Probab=99.80  E-value=8.2e-21  Score=156.23  Aligned_cols=106  Identities=18%  Similarity=0.237  Sum_probs=89.3

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      ..|+++++.+++++++++|||||++.||           ..||||||+|||+..+..         .+.+++.  .++++
T Consensus        28 ~~Is~~el~~~l~~~~~~lIDvR~~~ey-----------~~ghIpgAinip~~~l~~---------~~~~l~~--~~~~~   85 (152)
T 1t3k_A           28 SYITSTQLLPLHRRPNIAIIDVRDEERN-----------YDGHIAGSLHYASGSFDD---------KISHLVQ--NVKDK   85 (152)
T ss_dssp             EEECTTTTTTCCCCTTEEEEEESCSHHH-----------HSSCCCSSEEECCSSSST---------THHHHHH--TCCSC
T ss_pred             ceECHHHHHHHhcCCCEEEEECCChhhc-----------cCccCCCCEECCHHHHHH---------HHHHHHH--hcCCC
Confidence            4788888888887678999999999999           689999999999987643         2445555  45789


Q ss_pred             CCEEEecC-CcHHHHHHHHHHH--------hcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          270 KPVVTACG-TGVTACILALGLN--------RLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       270 ~~vivyC~-~G~ra~~~~~~L~--------~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++|||||. +|.|+..++..|.        .+||++|++|+||+.+|..++ +|++++
T Consensus        86 ~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g-~p~~~~  142 (152)
T 1t3k_A           86 DTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASG-KPVCRC  142 (152)
T ss_dssp             CEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHS-CSSCCC
T ss_pred             CEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcC-CccccC
Confidence            99999999 9999888877664        489999999999999999995 999874

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=99.80  E-value=5.3e-20  Score=172.60  Aligned_cols=115  Identities=23%  Similarity=0.307  Sum_probs=101.9

Q ss_pred             ccccCHHHHHHHhhcCCcEEEeccC--------CCcccCCCCCCCCCCCccccCCCcccCccc-ccCC------CCCCCC
Q 020963          189 HLIWTLEQVKRNIEEGTYQLVDARS--------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQ-MLDA------SQTLLP  253 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~~~~liDvR~--------~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~-l~~~------~~~~~~  253 (319)
                      ...|+++++.+++++  ++|||||+        +.||           ..||||||+|||+.. +.+.      .+.+.+
T Consensus        13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~~~~~~ey-----------~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~   79 (373)
T 1okg_A           13 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQY-----------AKEHVKSAIRADVDTNLSKLVPTSTARHPLPP   79 (373)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHH-----------HHCEETTCEECCTTTTSCCCCTTCCCSSCCCC
T ss_pred             CcEEcHHHHHHHcCC--cEEEEecCCccccccchhHH-----------hhCcCCCCEEeCchhhhhcccccCCccccCCC
Confidence            458999999998865  99999998        5788           689999999999986 6543      356788


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEec-CCcHHHH-HHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          254 ADELKKRFEQEGISLEKPVVTAC-GTGVTAC-ILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       254 ~~~l~~~l~~~~~~~~~~vivyC-~~G~ra~-~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      .++|.+.+...+++++++||||| .+|.+++ ++++.|+.+|| +|++|+||+.+|..++ +|++++
T Consensus        80 ~~~f~~~l~~~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g-~pv~~~  144 (373)
T 1okg_A           80 XAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAG-LEMESG  144 (373)
T ss_dssp             HHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTT-CCEECS
T ss_pred             HHHHHHHHHHcCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhc-CCcccC
Confidence            89999999999999999999999 7888886 99999999999 9999999999999995 998865

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=99.79  E-value=3.5e-20  Score=151.73  Aligned_cols=117  Identities=11%  Similarity=0.083  Sum_probs=87.9

Q ss_pred             CCcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhhh-cCC------cCceecCcccccccCCCCCCCCCC-HHHH
Q 020963           21 EPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQV-AHI------PGALFFDVDGVADRTTNLPHMLPS-EEAF   91 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~~-ghI------pgAi~ip~~~l~~~~~~~~~~~~~-~~~~   91 (319)
                      ...|++++|.+++++ ++++|||||         +..+|.. |||      |||+|+|+..+ ..     ...+. .+++
T Consensus         4 ~~~is~~el~~~l~~~~~~~liDVR---------~~~e~~~~ghi~~~g~~pgAv~ip~~~~-~~-----~~~~~~~~~l   68 (148)
T 2fsx_A            4 AGDITPLQAWEMLSDNPRAVLVDVR---------CEAEWRFVGVPDLSSLGREVVYVEWATS-DG-----THNDNFLAEL   68 (148)
T ss_dssp             SEEECHHHHHHHHHHCTTCEEEECS---------CHHHHHHTCEECCGGGTCCCEECCSBCT-TS-----CBCTTHHHHH
T ss_pred             cccCCHHHHHHHHhcCCCeEEEECC---------CHHHHHhcCCCccccCCCCcEEeeeecc-cc-----ccCHHHHHHH
Confidence            457999999999874 579999999         7889997 999      99999999762 10     01111 2345


Q ss_pred             HHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCH------------HHHHhCCCCcccCC
Q 020963           92 AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL------------PRWRASGYDVESSA  153 (319)
Q Consensus        92 ~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~------------~~W~~~g~p~~~~~  153 (319)
                      .+.+...+++++++|||||..|.+ +.++++.|+.+||++|++|+||+            .+|+++|+|++...
T Consensus        69 ~~~l~~~~~~~~~~ivvyC~~G~r-S~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~  141 (148)
T 2fsx_A           69 RDRIPADADQHERPVIFLCRSGNR-SIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR  141 (148)
T ss_dssp             HHHCC-------CCEEEECSSSST-HHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred             HHHHhhccCCCCCEEEEEcCCChh-HHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence            544545677899999999988765 88999999999999999999999            68888999888653

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=99.79  E-value=2.8e-20  Score=140.45  Aligned_cols=93  Identities=20%  Similarity=0.218  Sum_probs=74.3

Q ss_pred             CcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCC
Q 020963           22 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  101 (319)
Q Consensus        22 ~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~  101 (319)
                      +.||++++.+++++ +++|||||         +..+|..||||||+|+|+..+...                 +  ..++
T Consensus         2 ~~is~~~l~~~~~~-~~~liDvR---------~~~e~~~ghi~gAi~ip~~~l~~~-----------------~--~~l~   52 (94)
T 1wv9_A            2 RKVRPEELPALLEE-GVLVVDVR---------PADRRSTPLPFAAEWVPLEKIQKG-----------------E--HGLP   52 (94)
T ss_dssp             CEECGGGHHHHHHT-TCEEEECC---------CC--CCSCCSSCCEECCHHHHTTT-----------------C--CCCC
T ss_pred             CcCCHHHHHHHHHC-CCEEEECC---------CHHHHhcccCCCCEECCHHHHHHH-----------------H--HhCC
Confidence            46899999999876 78999999         678999999999999998766431                 1  1245


Q ss_pred             CCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCC
Q 020963          102 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus       102 ~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  146 (319)
                      + ++||+||.+|. ++.++++.|+.+||+ |++|+||+.+|.++|
T Consensus        53 ~-~~ivvyC~~g~-rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G   94 (94)
T 1wv9_A           53 R-RPLLLVCEKGL-LSQVAALYLEAEGYE-AMSLEGGLQALTQGK   94 (94)
T ss_dssp             S-SCEEEECSSSH-HHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred             C-CCEEEEcCCCC-hHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence            6 89999998876 489999999999998 999999999998765

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=99.79  E-value=4.5e-20  Score=148.59  Aligned_cols=115  Identities=11%  Similarity=0.036  Sum_probs=89.3

Q ss_pred             ccCHHHHHHHhh-cCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHc-CCCC
Q 020963          191 IWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE-GISL  268 (319)
Q Consensus       191 ~is~~~l~~~~~-~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~-~~~~  268 (319)
                      .|+++++.+.+. .++++|||||++.||...-. +   ...||||||+|||+..+.        ...+.+.+... .+++
T Consensus         6 ~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~-~---~~~g~~~ga~~ip~~~~~--------~~~~~~~l~~~~~~~~   73 (134)
T 1vee_A            6 SGSAKNAYTKLGTDDNAQLLDIRATADFRQVGS-P---NIKGLGKKAVSTVYNGED--------KPGFLKKLSLKFKDPE   73 (134)
T ss_dssp             BCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCE-E---CCTTTSCCCEECCCCGGG--------HHHHHHHHHTTCSCGG
T ss_pred             ccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCC-C---cccccCCceEEeeccccc--------ChhHHHHHHHHhCCCC
Confidence            688999998886 46799999999999952100 0   023566899999987642        13333444432 2378


Q ss_pred             CCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcH---HHHhCCCCCCCccC
Q 020963          269 EKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSW---TEWGAQPDTPVETS  318 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~---~~W~~~~~~p~~~~  318 (319)
                      +++|||||++|.||..++..|+.+||.+|+++.||+   .+|..++ +|+++.
T Consensus        74 ~~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g-~p~~~~  125 (134)
T 1vee_A           74 NTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSS-LPWIEP  125 (134)
T ss_dssp             GCEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGT-CCEECC
T ss_pred             CCEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcC-CCCCCC
Confidence            999999999999999999999999999999999999   7899995 999864

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=99.78  E-value=5.7e-20  Score=147.33  Aligned_cols=103  Identities=15%  Similarity=0.286  Sum_probs=80.4

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCC---------CC-----------
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---------QT-----------  250 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~---------~~-----------  250 (319)
                      .|+++++.+   .++++|||||++.||           ..||||||+|||+..+....         +.           
T Consensus         6 ~i~~~el~~---~~~~~iiDvR~~~e~-----------~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (134)
T 3g5j_A            6 VIKIEKALK---LDKVIFVDVRTEGEY-----------EEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYV   71 (134)
T ss_dssp             EECHHHHTT---CTTEEEEECSCHHHH-----------HHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ccCHHHHHh---cCCcEEEEcCCHHHH-----------hcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccc
Confidence            577888765   567999999999999           68999999999997542110         00           


Q ss_pred             CCCHHHHHHHHHHcCCCCC-CCEEEec-CCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCC
Q 020963          251 LLPADELKKRFEQEGISLE-KPVVTAC-GTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       251 ~~~~~~l~~~l~~~~~~~~-~~vivyC-~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      ....+++.+.+.  +++++ ++||+|| .+|.||..+++.|+.+|| +|++|+||+.+|...
T Consensus        72 ~~~~~~~~~~~~--~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~  130 (134)
T 3g5j_A           72 SYKLKDIYLQAA--ELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF  130 (134)
T ss_dssp             GGGHHHHHHHHH--HHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred             cccHHHHHHHHH--HhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence            001134445555  35677 9999999 599999999999999999 999999999999864

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=99.77  E-value=1.5e-19  Score=143.59  Aligned_cols=110  Identities=20%  Similarity=0.141  Sum_probs=82.7

Q ss_pred             cccHHHHHHhcCCC-CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHH----HHh
Q 020963           23 VVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA----VSA   97 (319)
Q Consensus        23 ~Is~~~l~~~l~~~-~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~----~~~   97 (319)
                      .||+++|.++++++ +++|||||         +..+|..||||||+|+|+..+.....      .....+.+.    ...
T Consensus         2 ~is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~------~~~~~~~~~l~~~~~~   66 (127)
T 3i2v_A            2 RVSVTDYKRLLDSGAFHLLLDVR---------PQVEVDICRLPHALHIPLKHLERRDA------ESLKLLKEAIWEEKQG   66 (127)
T ss_dssp             EECHHHHHHHHHHTCCCEEEECS---------CHHHHHHCCCTTSEECCHHHHHTTCH------HHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHhCCCCeEEEECC---------CHHHhhheecCCceeCChHHHhhhhh------hhHHHHHHHHhhhccc
Confidence            58999999999765 59999999         78999999999999999987644210      001111221    223


Q ss_pred             CCCCCCCeEEEEcCCCcchhHHHHHHHHHh------cCCceEEecCCHHHHHhCCCC
Q 020963           98 LGLENKDGLVVYDGKGIFSAARVWWMFRVF------GHDRVWVLDGGLPRWRASGYD  148 (319)
Q Consensus        98 ~~i~~~~~vvly~~~g~~~a~~~~~~l~~~------G~~~v~~l~GG~~~W~~~g~p  148 (319)
                      .+++++++|||||..|.+ +..+++.|+.+      |+.+|++|+||+.+|.++..|
T Consensus        67 ~~~~~~~~ivv~C~~G~r-s~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~  122 (127)
T 3i2v_A           67 TQEGAAVPIYVICKLGND-SQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG  122 (127)
T ss_dssp             C---CCEEEEEECSSSSH-HHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred             ccCCCCCeEEEEcCCCCc-HHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence            456677799999988765 88889999998      688999999999999987654

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=99.76  E-value=1.5e-18  Score=138.93  Aligned_cols=110  Identities=16%  Similarity=0.247  Sum_probs=79.5

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCC----------------CCCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT----------------NLPHM   84 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~----------------~~~~~   84 (319)
                      ...|+++++.+   +++++|||||         +..+|..||||||+|+|+..+.....                .....
T Consensus         4 ~~~i~~~el~~---~~~~~iiDvR---------~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (134)
T 3g5j_A            4 MSVIKIEKALK---LDKVIFVDVR---------TEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYV   71 (134)
T ss_dssp             -CEECHHHHTT---CTTEEEEECS---------CHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ccccCHHHHHh---cCCcEEEEcC---------CHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccc
Confidence            45799999987   5589999999         78999999999999999965421000                00000


Q ss_pred             CCCHHHHHHHHHhCCCCCC-CeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhC
Q 020963           85 LPSEEAFAAAVSALGLENK-DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus        85 ~~~~~~~~~~~~~~~i~~~-~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~  145 (319)
                      .+..++|.+.+..  ++++ ++||+||..++.++.++++.|+.+|| +|++|+||+.+|.+.
T Consensus        72 ~~~~~~~~~~~~~--~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~  130 (134)
T 3g5j_A           72 SYKLKDIYLQAAE--LALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF  130 (134)
T ss_dssp             GGGHHHHHHHHHH--HHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred             cccHHHHHHHHHH--hccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence            0112344444444  3566 89999995333458999999999999 999999999999864

>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}

Probab=99.75  E-value=8.8e-20  Score=147.60  Aligned_cols=111  Identities=13%  Similarity=0.194  Sum_probs=78.9

Q ss_pred             ccCHHHHHH--------HhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCC----CCCCCCHHHHH
Q 020963          191 IWTLEQVKR--------NIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA----SQTLLPADELK  258 (319)
Q Consensus       191 ~is~~~l~~--------~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~----~~~~~~~~~l~  258 (319)
                      .|++++|.+        ++++++++|||||++.||           ..||||||+|+|+.++...    .+.+    .+.
T Consensus         2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~----~~~   66 (142)
T 2ouc_A            2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEY-----------NKSHIQGAVHINCADKISRRRLQQGKI----TVL   66 (142)
T ss_dssp             EECHHHHHHHHHC----------CEEEECSCHHHH-----------HHEEETTCEECCCSSHHHHHHHHTTSS----CHH
T ss_pred             ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHh-----------hhhhccCccccCccHHHHHHHhhcCCc----chh
Confidence            578888888        666667999999999999           6899999999999875421    0111    112


Q ss_pred             HHHHHcCC-C-----CCCCEEEecCCcHHH---------HHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          259 KRFEQEGI-S-----LEKPVVTACGTGVTA---------CILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       259 ~~l~~~~~-~-----~~~~vivyC~~G~ra---------~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ..+..... .     ++++||+||.+|.++         .+++..|...|| +|++|+||+.+|...+ .|+.++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g-~~~~~~  139 (142)
T 2ouc_A           67 DLISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH-ENLCDN  139 (142)
T ss_dssp             HHHHTTSCTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTC-GGGEEE
T ss_pred             hhCCChhhhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHC-HHhhcc
Confidence            22221111 1     378999999999875         456777899999 9999999999999995 888764

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=99.74  E-value=1.7e-18  Score=154.20  Aligned_cols=104  Identities=12%  Similarity=0.116  Sum_probs=89.2

Q ss_pred             CCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH-HcC
Q 020963          187 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE-QEG  265 (319)
Q Consensus       187 ~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~-~~~  265 (319)
                      .....|+++++.+++++++++|||||++.||           ..||||||+|+|+..+..          +...+. ..+
T Consensus       119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey-----------~~GHIpGAiniP~~~~~~----------~~~~l~~~l~  177 (265)
T 4f67_A          119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEY-----------ELGTFKNAINPDIENFRE----------FPDYVQRNLI  177 (265)
T ss_dssp             CTTCEECHHHHHHHTTCTTSEEEECSCHHHH-----------HHEEETTCBCCCCSSGGG----------HHHHHHHHTG
T ss_pred             CCCceECHHHHHHHhcCCCeEEEEeCCchHh-----------hcCcCCCCEeCCHHHHHh----------hHHHHHHhhh
Confidence            3456899999999998888999999999999           689999999999987642          122222 334


Q ss_pred             CCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          266 ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       266 ~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                      .+++++||+||.+|.||..++..|+.+||++|++|+||+.+|..+.
T Consensus       178 ~~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~  223 (265)
T 4f67_A          178 DKKDKKIAMFCTGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESI  223 (265)
T ss_dssp             GGTTSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred             hCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence            5789999999999999999999999999999999999999999864

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=99.74  E-value=4.6e-18  Score=136.73  Aligned_cols=112  Identities=13%  Similarity=0.095  Sum_probs=89.6

Q ss_pred             CCCcccHHHHHHhcC-CCCeEEEEeecCCCCCCCCchhhhhhc-CC------cCceecCcccccccCCCCCCCCCCHHHH
Q 020963           20 KEPVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVA-HI------PGALFFDVDGVADRTTNLPHMLPSEEAF   91 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~~~~~g-hI------pgAi~ip~~~l~~~~~~~~~~~~~~~~~   91 (319)
                      ....|+++++.++++ +++++|||||         +..+|..+ |+      |||+|||+..+.            ...|
T Consensus         3 ~~~~is~~e~~~~l~~~~~~~liDVR---------~~~E~~~~~~~~~~g~~~ga~~ip~~~~~------------~~~~   61 (134)
T 1vee_A            3 SGSSGSAKNAYTKLGTDDNAQLLDIR---------ATADFRQVGSPNIKGLGKKAVSTVYNGED------------KPGF   61 (134)
T ss_dssp             CSCBCCHHHHHHHHHHCTTEEEEECS---------CHHHHHHTCEECCTTTSCCCEECCCCGGG------------HHHH
T ss_pred             CCCccCHHHHHHHHHhCCCeEEEEcC---------CHHHHhhcCCCcccccCCceEEeeccccc------------ChhH
Confidence            356799999999987 5679999999         77899863 33      799999986531            1245


Q ss_pred             HHHHHhCC-CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCH---HHHHhCCCCcccCC
Q 020963           92 AAAVSALG-LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL---PRWRASGYDVESSA  153 (319)
Q Consensus        92 ~~~~~~~~-i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~---~~W~~~g~p~~~~~  153 (319)
                      .+.+.... ++++++|||||..|.+ +..++..|+.+||++|+.|.||+   .+|+++|+|++...
T Consensus        62 ~~~l~~~~~~~~~~~ivv~C~sG~R-S~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~  126 (134)
T 1vee_A           62 LKKLSLKFKDPENTTLYILDKFDGN-SELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPK  126 (134)
T ss_dssp             HHHHHTTCSCGGGCEEEEECSSSTT-HHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCC
T ss_pred             HHHHHHHhCCCCCCEEEEEeCCCCc-HHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCC
Confidence            44444432 3688999999998875 88999999999999999999999   78999999998754

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1

Probab=99.73  E-value=2.7e-18  Score=141.12  Aligned_cols=113  Identities=19%  Similarity=0.356  Sum_probs=85.7

Q ss_pred             CCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCccccc-----ccCCCCCCCCCCHHHHH
Q 020963           20 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVA-----DRTTNLPHMLPSEEAFA   92 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~-----~~~~~~~~~~~~~~~~~   92 (319)
                      ....|++++|.++++++  +++|||||         +..+|..||||||+|+|+..+.     .....+...+++.+..+
T Consensus        14 ~~~~is~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~   84 (154)
T 1hzm_A           14 MAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRD   84 (154)
T ss_dssp             CSSBSCCCCHHHHHHHCSSSCEEECCS---------TTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHH
T ss_pred             cccccCHHHHHHHHhCCCCCEEEEEcC---------CHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHH
Confidence            35789999999998765  79999999         7789999999999999997642     11112334555543333


Q ss_pred             HHHHhCCCCCCCeEEEEcCCCcch------hHHHHHHHHHh---cCCceEEecCCHHHHHhC
Q 020963           93 AAVSALGLENKDGLVVYDGKGIFS------AARVWWMFRVF---GHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus        93 ~~~~~~~i~~~~~vvly~~~g~~~------a~~~~~~l~~~---G~~~v~~l~GG~~~W~~~  145 (319)
                      + +.  +++++++|||||..|.+.      +.+++++|+.+   ||+ |++|+||+.+|.+.
T Consensus        85 ~-~~--~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~  142 (154)
T 1hzm_A           85 R-FT--RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE  142 (154)
T ss_dssp             H-HH--HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred             H-Hh--ccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence            2 22  246788999999887654      36678888877   998 99999999999875

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A

Probab=99.73  E-value=8.8e-20  Score=150.03  Aligned_cols=113  Identities=16%  Similarity=0.204  Sum_probs=84.0

Q ss_pred             ccCHHHHHHHhhc--CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCC---CCCCCCHHHH--HHHHHH
Q 020963          191 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA---SQTLLPADEL--KKRFEQ  263 (319)
Q Consensus       191 ~is~~~l~~~~~~--~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~---~~~~~~~~~l--~~~l~~  263 (319)
                      .|+++++.++++.  ++++|||||++.||           ..||||||+|||+..+...   .+.+ +.+.+  .+...+
T Consensus         5 ~Is~~~l~~~l~~~~~~~~iiDvR~~~ey-----------~~gHIpgAinip~~~l~~~~~~~~~~-~~~~ll~~~~~~~   72 (153)
T 2vsw_A            5 QIVTERLVALLESGTEKVLLIDSRPFVEY-----------NTSHILEAININCSKLMKRRLQQDKV-LITELIQHSAKHK   72 (153)
T ss_dssp             EECHHHHHHHHTSTTCCEEEEECSCHHHH-----------HHCEETTCEECCCCHHHHHHHHTTSS-CHHHHHHHSCSSC
T ss_pred             cccHHHHHHHHhcCCCCEEEEECCCHHHh-----------ccCccCCCeeeChHHHHHhhhhcCCc-CHHHhcCchhhhh
Confidence            6789999998863  57999999999999           6899999999999886321   1111 11121  111123


Q ss_pred             cCCCCCCCEEEecCCcHHHHHH------HHHHHhc--CCCCceeeeCcHHHHhCCCCCCCc
Q 020963          264 EGISLEKPVVTACGTGVTACIL------ALGLNRL--GKHDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       264 ~~~~~~~~vivyC~~G~ra~~~------~~~L~~~--G~~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                      .+++++++|||||.+|.++..+      +++|+.+  ||.+|++|+||+.+|.... .++.
T Consensus        73 ~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~-~~~~  132 (153)
T 2vsw_A           73 VDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCF-PGLC  132 (153)
T ss_dssp             CCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHC-GGGE
T ss_pred             hccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhC-hhhh
Confidence            4678899999999999887655      5777744  9999999999999998863 3443

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A

Probab=99.73  E-value=3e-18  Score=140.85  Aligned_cols=122  Identities=18%  Similarity=0.267  Sum_probs=85.5

Q ss_pred             CCcccHHHHHHhcCC--CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHH--HHHHH
Q 020963           21 EPVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF--AAAVS   96 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~--~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~--~~~~~   96 (319)
                      .+.|++++|.+++++  ++++|||||         +..+|..||||||+|||+..+...... ...+ ..+.+  .+...
T Consensus         3 ~~~Is~~~l~~~l~~~~~~~~iiDvR---------~~~ey~~gHIpgAinip~~~l~~~~~~-~~~~-~~~~ll~~~~~~   71 (153)
T 2vsw_A            3 GTQIVTERLVALLESGTEKVLLIDSR---------PFVEYNTSHILEAININCSKLMKRRLQ-QDKV-LITELIQHSAKH   71 (153)
T ss_dssp             CEEECHHHHHHHHTSTTCCEEEEECS---------CHHHHHHCEETTCEECCCCHHHHHHHH-TTSS-CHHHHHHHSCSS
T ss_pred             CccccHHHHHHHHhcCCCCEEEEECC---------CHHHhccCccCCCeeeChHHHHHhhhh-cCCc-CHHHhcCchhhh
Confidence            467999999999973  579999999         789999999999999999765211000 0000 11111  11112


Q ss_pred             hCCCCCCCeEEEEcCCCcchhH-----HHHHHHHHh--cCCceEEecCCHHHHHhCCCCcccCC
Q 020963           97 ALGLENKDGLVVYDGKGIFSAA-----RVWWMFRVF--GHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        97 ~~~i~~~~~vvly~~~g~~~a~-----~~~~~l~~~--G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      .++++++++|||||..|.+.+.     .++++|+.+  ||++|++|+||+.+|.+.+.++....
T Consensus        72 ~~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~  135 (153)
T 2vsw_A           72 KVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGK  135 (153)
T ss_dssp             CCCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC-
T ss_pred             hhccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCC
Confidence            3467889999999988765322     226777755  99999999999999998876666543

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=99.72  E-value=3.1e-18  Score=126.66  Aligned_cols=79  Identities=19%  Similarity=0.258  Sum_probs=68.8

Q ss_pred             CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEEEcCCCcch
Q 020963           37 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFS  116 (319)
Q Consensus        37 ~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvly~~~g~~~  116 (319)
                      +++|||||         +..+|..||||||+|+|+.                 +|.+.+..++++++++||+||.+|. +
T Consensus         1 ~~~liDvR---------~~~e~~~ghIpgA~~ip~~-----------------~l~~~~~~l~~~~~~~ivv~C~~g~-r   53 (85)
T 2jtq_A            1 AEHWIDVR---------VPEQYQQEHVQGAINIPLK-----------------EVKERIATAVPDKNDTVKVYCNAGR-Q   53 (85)
T ss_dssp             CEEEEECS---------CHHHHTTEEETTCEECCHH-----------------HHHHHHHHHCCCTTSEEEEEESSSH-H
T ss_pred             CCEEEECC---------CHHHHHhCCCCCCEEcCHH-----------------HHHHHHHHhCCCCCCcEEEEcCCCc-h
Confidence            46899999         7889999999999999985                 3445666777889999999998775 5


Q ss_pred             hHHHHHHHHHhcCCceEEecCCHHHHH
Q 020963          117 AARVWWMFRVFGHDRVWVLDGGLPRWR  143 (319)
Q Consensus       117 a~~~~~~l~~~G~~~v~~l~GG~~~W~  143 (319)
                      +.++++.|+.+||++|+++ ||+.+|.
T Consensus        54 s~~aa~~L~~~G~~~v~~l-GG~~~w~   79 (85)
T 2jtq_A           54 SGQAKEILSEMGYTHVENA-GGLKDIA   79 (85)
T ss_dssp             HHHHHHHHHHTTCSSEEEE-EETTTCC
T ss_pred             HHHHHHHHHHcCCCCEEec-cCHHHHh
Confidence            8999999999999999999 9999985

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1

Probab=99.72  E-value=1.3e-18  Score=143.02  Aligned_cols=107  Identities=21%  Similarity=0.345  Sum_probs=82.2

Q ss_pred             cccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCccccc------C--CCCCCCCHHHHHH
Q 020963          190 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML------D--ASQTLLPADELKK  259 (319)
Q Consensus       190 ~~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~------~--~~~~~~~~~~l~~  259 (319)
                      ..|+++++.++++++  +++|||||++.||           ..||||||+|||+..+.      .  ....+.+.++.++
T Consensus        16 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~   84 (154)
T 1hzm_A           16 ISKTVAWLNEQLELGNERLLLMDCRPQELY-----------ESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRD   84 (154)
T ss_dssp             SBSCCCCHHHHHHHCSSSCEEECCSTTHHH-----------HHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHH
T ss_pred             cccCHHHHHHHHhCCCCCEEEEEcCCHHHH-----------hhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHH
Confidence            367888888888765  7999999999999           68999999999998754      1  1112222223445


Q ss_pred             HHHHcCCCCCCCEEEecCCcHHH-------HHHHHHHHhc---CCCCceeeeCcHHHHhCC
Q 020963          260 RFEQEGISLEKPVVTACGTGVTA-------CILALGLNRL---GKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~G~ra-------~~~~~~L~~~---G~~~v~~~~Gg~~~W~~~  310 (319)
                      .+.  +++++++|||||.+|.++       ..+++.|+.+   ||+ |++|+||+.+|...
T Consensus        85 ~~~--~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~  142 (154)
T 1hzm_A           85 RFT--RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE  142 (154)
T ss_dssp             HHH--HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred             HHh--ccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence            555  567889999999998764       4557777765   998 99999999999875

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}

Probab=99.72  E-value=3.6e-18  Score=140.39  Aligned_cols=105  Identities=20%  Similarity=0.226  Sum_probs=80.3

Q ss_pred             ccCHHHHHHHhhcC----CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 020963          191 IWTLEQVKRNIEEG----TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  266 (319)
Q Consensus       191 ~is~~~l~~~~~~~----~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~  266 (319)
                      .|+++++.+.++++    +++|||||++ ||           ..||||||+|||+..+...     .-+++.+.+..   
T Consensus         6 ~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey-----------~~gHIpGAinip~~~l~~~-----~~~~l~~~l~~---   65 (152)
T 2j6p_A            6 YIKPEELVELLDNPDSLVKAAVIDCRDS-DR-----------DCGFIVNSINMPTISCTEE-----MYEKLAKTLFE---   65 (152)
T ss_dssp             EECHHHHHHHHHSHHHHHTEEEEECCST-TG-----------GGCBCTTCEECCTTTCCHH-----HHHHHHHHHHH---
T ss_pred             ccCHHHHHHHHhCCCCCCCEEEEEcCcH-Hh-----------CcCcCCCcEECChhHhhHH-----HHHHHHHHhcc---
Confidence            68899999988763    7999999999 99           6899999999999876421     01334444442   


Q ss_pred             CCCCCEEEec-CCcHHHHHHH----HHHHhcCC--CCceeeeCcHHHHhCCCCCCCc
Q 020963          267 SLEKPVVTAC-GTGVTACILA----LGLNRLGK--HDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       267 ~~~~~vivyC-~~G~ra~~~~----~~L~~~G~--~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                      .....||+|| .+|.|+..++    ..|..+||  .+|++|+||+.+|...+ .|+.
T Consensus        66 ~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g-~~~~  121 (152)
T 2j6p_A           66 EKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMY-GDVR  121 (152)
T ss_dssp             TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHH-TTTC
T ss_pred             cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHc-CCCC
Confidence            2234577789 7999988877    66888997  48999999999999885 5554

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=99.72  E-value=1.5e-17  Score=148.02  Aligned_cols=106  Identities=16%  Similarity=0.243  Sum_probs=87.8

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           19 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      .....|+++++.+++++++++|||||         +..+|..||||||+|+|+..+...          .+.+.   ..+
T Consensus       119 ~~~~~Is~~el~~ll~~~~~vlIDVR---------~~~Ey~~GHIpGAiniP~~~~~~~----------~~~l~---~~l  176 (265)
T 4f67_A          119 NAGTYLSPEEWHQFIQDPNVILLDTR---------NDYEYELGTFKNAINPDIENFREF----------PDYVQ---RNL  176 (265)
T ss_dssp             CTTCEECHHHHHHHTTCTTSEEEECS---------CHHHHHHEEETTCBCCCCSSGGGH----------HHHHH---HHT
T ss_pred             CCCceECHHHHHHHhcCCCeEEEEeC---------CchHhhcCcCCCCEeCCHHHHHhh----------HHHHH---Hhh
Confidence            34679999999999998889999999         788999999999999999876431          11122   234


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCC
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  147 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~  147 (319)
                      ..+++++||+||..|.+ +..+++.|+..||++|+.|+||+.+|.+...
T Consensus       177 ~~~kdk~IVvyC~~G~R-S~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~  224 (265)
T 4f67_A          177 IDKKDKKIAMFCTGGIR-CEKTTAYMKELGFEHVYQLHDGILNYLESIP  224 (265)
T ss_dssp             GGGTTSCEEEECSSSHH-HHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred             hhCCCCeEEEEeCCChH-HHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence            45788999999987764 8899999999999999999999999987643

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}

Probab=99.72  E-value=6.8e-18  Score=138.70  Aligned_cols=109  Identities=18%  Similarity=0.151  Sum_probs=81.0

Q ss_pred             CCCcccHHHHHHhcCCC----CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 020963           20 KEPVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV   95 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~----~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~   95 (319)
                      ....|++++|.++++++    +++|||||         +. +|..||||||+|+|+..+...         ..+++.+.+
T Consensus         3 ~~~~Is~~el~~~l~~~~~~~~~~lIDvR---------~~-ey~~gHIpGAinip~~~l~~~---------~~~~l~~~l   63 (152)
T 2j6p_A            3 NYTYIKPEELVELLDNPDSLVKAAVIDCR---------DS-DRDCGFIVNSINMPTISCTEE---------MYEKLAKTL   63 (152)
T ss_dssp             CCEEECHHHHHHHHHSHHHHHTEEEEECC---------ST-TGGGCBCTTCEECCTTTCCHH---------HHHHHHHHH
T ss_pred             CcCccCHHHHHHHHhCCCCCCCEEEEEcC---------cH-HhCcCcCCCcEECChhHhhHH---------HHHHHHHHh
Confidence            35689999999999763    79999998         56 899999999999999765320         012343333


Q ss_pred             HhCCCCCCCeEEEEc-CCCcchhHHHH----HHHHHhcC--CceEEecCCHHHHHhCCCCccc
Q 020963           96 SALGLENKDGLVVYD-GKGIFSAARVW----WMFRVFGH--DRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus        96 ~~~~i~~~~~vvly~-~~g~~~a~~~~----~~l~~~G~--~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                      ..   ..+..||+|| .+|.+ +..++    +.|+.+||  ++|++|+||+.+|.+++.++..
T Consensus        64 ~~---~~~~~vV~yC~~sg~r-s~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~  122 (152)
T 2j6p_A           64 FE---EKKELAVFHCAQSLVR-APKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP  122 (152)
T ss_dssp             HH---TTCCEEEEECSSSSSH-HHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred             cc---cCCCEEEEEcCCCCCc-cHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence            32   2345677889 45554 55555    67888997  5899999999999999887654

>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A

Probab=99.71  E-value=8.7e-18  Score=145.51  Aligned_cols=107  Identities=14%  Similarity=0.131  Sum_probs=85.6

Q ss_pred             CCCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHH
Q 020963           19 PKEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFA   92 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~   92 (319)
                      .....|++++|.++++++      +++|||||         +..+|..||||||+|||+..+..                
T Consensus        41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR---------~~~Ey~~gHIpGAinip~~~l~~----------------   95 (211)
T 1qb0_A           41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAE----------------   95 (211)
T ss_dssp             TTSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH----------------
T ss_pred             CCCCeeCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHccCcCCCCEECCchHHHH----------------
Confidence            456899999999999863      78999999         78899999999999999865421                


Q ss_pred             HHHH---hCCCCCCCeE--EEEcC-CCcchhHHHHHHHHH----------hcCCceEEecCCHHHHHhCCCCccc
Q 020963           93 AAVS---ALGLENKDGL--VVYDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus        93 ~~~~---~~~i~~~~~v--vly~~-~g~~~a~~~~~~l~~----------~G~~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                      ..+.   .++++++++|  ||||. +|.+ +..+++.|+.          +||++|++|+||+.+|.+.|.++..
T Consensus        96 ~~~~~~~~l~~~~d~~ivvVvyC~~sG~r-s~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~  169 (211)
T 1qb0_A           96 SFLLKSPIAPCSLDKRVILIFHCEFSSER-GPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCE  169 (211)
T ss_dssp             HHHHTTTCCCSSTTSEEEEEEECSSSSSH-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred             HhhhhhhhccccCCCCeEEEEECCCCCcc-HHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccC
Confidence            1122   2334467777  78898 6654 7888888886          6999999999999999999988754

>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}

Probab=99.71  E-value=1e-17  Score=135.37  Aligned_cols=117  Identities=20%  Similarity=0.272  Sum_probs=78.1

Q ss_pred             CcccHHHHHH--------hcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 020963           22 PVVSVDWLHA--------NLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA   93 (319)
Q Consensus        22 ~~Is~~~l~~--------~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~   93 (319)
                      ..|+++||.+        ++++++++|||||         +..+|..||||||+|+|+..+.....-.....    .+..
T Consensus         1 k~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~----~~~~   67 (142)
T 2ouc_A            1 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCR---------PFMEYNKSHIQGAVHINCADKISRRRLQQGKI----TVLD   67 (142)
T ss_dssp             CEECHHHHHHHHHC----------CEEEECS---------CHHHHHHEEETTCEECCCSSHHHHHHHHTTSS----CHHH
T ss_pred             CccCHHHHHHHHHhcccccCCCCCCEEEEeC---------CHHHhhhhhccCccccCccHHHHHHHhhcCCc----chhh
Confidence            3689999999        6666689999999         78899999999999999976422100000001    1112


Q ss_pred             HHHhCCCC------CCCeEEEEcCCCcch--------hHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccC
Q 020963           94 AVSALGLE------NKDGLVVYDGKGIFS--------AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  152 (319)
Q Consensus        94 ~~~~~~i~------~~~~vvly~~~g~~~--------a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~  152 (319)
                      .+......      ++++||+||..|.+.        +..++..|...|| +|++|+||+.+|.++|.++.+.
T Consensus        68 ~~~~~~~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~  139 (142)
T 2ouc_A           68 LISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDN  139 (142)
T ss_dssp             HHHTTSCTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEE
T ss_pred             hCCChhhhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhcc
Confidence            22111110      268899999887652        1345566789999 9999999999999999887754

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=99.71  E-value=1.4e-17  Score=152.91  Aligned_cols=116  Identities=15%  Similarity=0.192  Sum_probs=98.6

Q ss_pred             ccCHHHHHHHhhcC---CcEEEeccC---------CCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCCH
Q 020963          191 IWTLEQVKRNIEEG---TYQLVDARS---------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPA  254 (319)
Q Consensus       191 ~is~~~l~~~~~~~---~~~liDvR~---------~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~  254 (319)
                      +||+++|.+++...   ++++||++=         ..||.          ..||||||++++++.+.+..    +.|.++
T Consensus        29 LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~----------~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~   98 (327)
T 3utn_X           29 LISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFL----------TKPRIPNSIFFDIDAISDKKSPYPHMFPTK   98 (327)
T ss_dssp             EECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHH----------HSCBCTTCEECCTTTSSCTTSSSTTCCCCH
T ss_pred             ccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHH----------hhCcCCCCeeeChHHhcCCCCCCCCCCcCH
Confidence            89999999998643   489999971         11331          47999999999998876543    468899


Q ss_pred             HHHHHHHHHcCCCCCCCEEEecCCc-HHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          255 DELKKRFEQEGISLEKPVVTACGTG-VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       255 ~~l~~~l~~~~~~~~~~vivyC~~G-~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +.|.+.++++||+++++||||++.| ..|+++||+|+.+|+++|++|||| .+|..++ +|++++
T Consensus        99 ~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g-~p~~~~  161 (327)
T 3utn_X           99 KVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFK-YPLDSS  161 (327)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTT-CCCBCC
T ss_pred             HHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhC-CCcccC
Confidence            9999999999999999999999865 679999999999999999999976 8999995 999875

>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A

Probab=99.71  E-value=7.8e-18  Score=141.50  Aligned_cols=108  Identities=14%  Similarity=0.156  Sum_probs=82.0

Q ss_pred             CCCCCcccHHHHHHhcCC------CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHH
Q 020963           18 SPKEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF   91 (319)
Q Consensus        18 ~~~~~~Is~~~l~~~l~~------~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~   91 (319)
                      ....+.|++++|.+++++      ++++|||||         +..+|..||||||+|+|+..+..               
T Consensus        20 ~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~---------------   75 (175)
T 2a2k_A           20 HQDLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAE---------------   75 (175)
T ss_dssp             STTSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH---------------
T ss_pred             CCCCceeCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHcCCcCCCcEECChhHHHH---------------
Confidence            345689999999999986      378999999         78999999999999999875422               


Q ss_pred             HHHHHh---CCCCCCCeEEE--EcC-CCcchhHHHHHHHHH----------hcCCceEEecCCHHHHHhCCCCccc
Q 020963           92 AAAVSA---LGLENKDGLVV--YDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus        92 ~~~~~~---~~i~~~~~vvl--y~~-~g~~~a~~~~~~l~~----------~G~~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                       ..+..   ++++++++|||  ||. +|. ++..+++.|+.          +||++|++|+||+.+|.+++.++..
T Consensus        76 -~~~~~~~~~~~~~~~~ivvv~yC~~~g~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~  149 (175)
T 2a2k_A           76 -SFLLKSPIAPCSLDKRVILIFHSEFSSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCE  149 (175)
T ss_dssp             -HHHHSSCCCC----CEEEEEEECSSSSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred             -HhhhhhhhccccCCCCeEEEEECCCCCC-ccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccC
Confidence             11221   23346777754  687 555 48888888885          4999999999999999999988754

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=99.70  E-value=4.1e-17  Score=143.01  Aligned_cols=103  Identities=21%  Similarity=0.331  Sum_probs=87.1

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhh----------cCCcCceecCcccccccCCCCCCCCCCH
Q 020963           19 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------AHIPGALFFDVDGVADRTTNLPHMLPSE   88 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~----------ghIpgAi~ip~~~l~~~~~~~~~~~~~~   88 (319)
                      .....|+++++.+     +++|||+|         +..+|..          ||||||+|+|+..+....          
T Consensus       118 ~~~~~i~~~e~~~-----~~~liDvR---------~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~----------  173 (230)
T 2eg4_A          118 RRDWLLTADEAAR-----HPLLLDVR---------SPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE----------  173 (230)
T ss_dssp             CGGGBCCHHHHHT-----CSCEEECS---------CHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT----------
T ss_pred             CccceeCHHHHhh-----CCeEEeCC---------CHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH----------
Confidence            4456899999987     57899999         7889999          999999999998775421          


Q ss_pred             HHHHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCccc
Q 020963           89 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus        89 ~~~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                          +.+...+++++++||+||.+|. +|+.++..|+.+| .+|++|+||+.+|.+.|+|+++
T Consensus       174 ----e~~~~~~~~~~~~iv~~C~~G~-rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~  230 (230)
T 2eg4_A          174 ----GLLERLGLQPGQEVGVYCHSGA-RSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP  230 (230)
T ss_dssp             ----THHHHHTCCTTCEEEEECSSSH-HHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred             ----HHHHhcCCCCCCCEEEEcCChH-HHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence                1344457889999999998876 4899999999999 8999999999999999999863

>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A

Probab=99.70  E-value=1.3e-17  Score=144.41  Aligned_cols=104  Identities=15%  Similarity=0.205  Sum_probs=84.7

Q ss_pred             ccccCHHHHHHHhhcC------CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH
Q 020963          189 HLIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  262 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~------~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~  262 (319)
                      ...|+++++.++++.+      +++|||||++.||           ..||||||+|||+..+..            ..+.
T Consensus        43 ~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey-----------~~gHIpGAinip~~~l~~------------~~~~   99 (211)
T 1qb0_A           43 LKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAE------------SFLL   99 (211)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHH------------HHHH
T ss_pred             CCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------ccCcCCCCEECCchHHHH------------Hhhh
Confidence            3478999999998763      6899999999999           689999999999976532            1122


Q ss_pred             ---HcCCCCCCCE--EEecC-CcHHHHHHHHHHHh----------cCCCCceeeeCcHHHHhCCCCCCCc
Q 020963          263 ---QEGISLEKPV--VTACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       263 ---~~~~~~~~~v--ivyC~-~G~ra~~~~~~L~~----------~G~~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                         ....+++++|  |+||. +|.||..++..|+.          +||.+|++|+||+.+|...+ .|+.
T Consensus       100 ~~~~l~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g-~~~~  168 (211)
T 1qb0_A          100 KSPIAPCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQH-PNFC  168 (211)
T ss_dssp             TTTCCCSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC-GGGE
T ss_pred             hhhhccccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHC-cccc
Confidence               1233478887  88999 99999999999885          79999999999999999985 6664

>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A

Probab=99.69  E-value=2.1e-17  Score=138.80  Aligned_cols=104  Identities=14%  Similarity=0.186  Sum_probs=81.1

Q ss_pred             ccccCHHHHHHHhhc------CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH
Q 020963          189 HLIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  262 (319)
Q Consensus       189 ~~~is~~~l~~~~~~------~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~  262 (319)
                      ...|+++++.+++++      ++++|||||++.||           ..||||||+|||+..+..            ..+.
T Consensus        23 ~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey-----------~~ghIpgAinip~~~l~~------------~~~~   79 (175)
T 2a2k_A           23 LKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAE------------SFLL   79 (175)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHH------------HHHH
T ss_pred             CceeCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------cCCcCCCcEECChhHHHH------------Hhhh
Confidence            357999999999875      36899999999999           689999999999976532            1122


Q ss_pred             H---cCCCCCCCEEE--ecC-CcHHHHHHHHHHHh----------cCCCCceeeeCcHHHHhCCCCCCCc
Q 020963          263 Q---EGISLEKPVVT--ACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       263 ~---~~~~~~~~viv--yC~-~G~ra~~~~~~L~~----------~G~~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                      .   ..++++++|||  ||. +|.||..++..|+.          +||.+|++|+||+.+|..++ .|+.
T Consensus        80 ~~~~~~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~-~~~~  148 (175)
T 2a2k_A           80 KSPIAPCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQH-PNFC  148 (175)
T ss_dssp             SSCCCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC-GGGE
T ss_pred             hhhhccccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHC-cccc
Confidence            1   12347888855  698 99999999999884          59999999999999999995 6764

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1

Probab=99.69  E-value=3.7e-17  Score=135.48  Aligned_cols=108  Identities=15%  Similarity=0.161  Sum_probs=83.7

Q ss_pred             CCCCcccHHHHHHhcCC------CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHH
Q 020963           19 PKEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFA   92 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~------~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~   92 (319)
                      ...+.|++++|.+++++      ++++|||||         +..+|..||||||+|+|+..+..                
T Consensus        20 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~~~~----------------   74 (161)
T 1c25_A           20 QDLKYISPEIMASVLNGKFANLIKEFVIIDCR---------YPYEYEGGHIKGAVNLHMEEEVE----------------   74 (161)
T ss_dssp             TTSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH----------------
T ss_pred             CCcceeCHHHHHHHHhccccccCCCeEEEECC---------ChHHccCCcccCcEeCChhHHHH----------------
Confidence            44678999999999986      379999999         78999999999999999875422                


Q ss_pred             HHHHhCC--CCCCCeE--EEEcC-CCcchhHHHHHHHHHh----------cCCceEEecCCHHHHHhCCCCcccC
Q 020963           93 AAVSALG--LENKDGL--VVYDG-KGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRASGYDVESS  152 (319)
Q Consensus        93 ~~~~~~~--i~~~~~v--vly~~-~g~~~a~~~~~~l~~~----------G~~~v~~l~GG~~~W~~~g~p~~~~  152 (319)
                      ..+....  .++++++  |+||. +|. ++..++..|+..          ||++|++|+||+.+|.+.+.|+...
T Consensus        75 ~~~~~~~~~~~~~~~ivvv~yC~~sg~-rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~  148 (161)
T 1c25_A           75 DFLLKKPIVPTDGKRVIVVFHCEFSSE-RGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEP  148 (161)
T ss_dssp             HHTTTSCCCCCTTSEEEEEEECSSSSS-HHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEES
T ss_pred             HHHhhhhhccCCCCCeEEEEEcCCCCc-chHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCC
Confidence            1111111  2456775  57888 565 478888888764          9999999999999999999887664

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1

Probab=99.68  E-value=1.1e-17  Score=138.65  Aligned_cols=104  Identities=13%  Similarity=0.185  Sum_probs=83.5

Q ss_pred             cccCHHHHHHHhhc------CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  263 (319)
Q Consensus       190 ~~is~~~l~~~~~~------~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~  263 (319)
                      ..|+++++.+.+++      ++++|||||++.||           ..||||||+|||+.++...            .+..
T Consensus        23 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~~~~~~------------~~~~   79 (161)
T 1c25_A           23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEY-----------EGGHIKGAVNLHMEEEVED------------FLLK   79 (161)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHHH------------HTTT
T ss_pred             ceeCHHHHHHHHhccccccCCCeEEEECCChHHc-----------cCCcccCcEeCChhHHHHH------------HHhh
Confidence            47999999999875      37899999999999           6899999999999765321            1111


Q ss_pred             c--CCCCCCCE--EEecC-CcHHHHHHHHHHHh----------cCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          264 E--GISLEKPV--VTACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       264 ~--~~~~~~~v--ivyC~-~G~ra~~~~~~L~~----------~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      .  -.+++++|  |+||. +|.||..++..|+.          +||.+|++|+||+.+|...+ .|+..
T Consensus        80 ~~~~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~-~~~~~  147 (161)
T 1c25_A           80 KPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKC-QSYCE  147 (161)
T ss_dssp             SCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHH-GGGEE
T ss_pred             hhhccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHc-ccccC
Confidence            1  12577886  68899 99999999999875          59999999999999999985 67654

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*

Probab=99.67  E-value=1.1e-17  Score=139.93  Aligned_cols=111  Identities=20%  Similarity=0.283  Sum_probs=81.0

Q ss_pred             cccCHHHHHHHhhcC-------CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEEG-------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  262 (319)
Q Consensus       190 ~~is~~~l~~~~~~~-------~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~  262 (319)
                      ..|++++|.+++..+       +++|||||+ .||           ..||||||+|||+..+....   ...+++.+.+.
T Consensus        31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey-----------~~GHIpGAiniP~~~l~~~~---~~l~~l~~~~~   95 (169)
T 3f4a_A           31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDY-----------MGGHIKDGWHYAYSRLKQDP---EYLRELKHRLL   95 (169)
T ss_dssp             EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTC-----------TTCEETTCEECCHHHHHHCH---HHHHHHHHHHH
T ss_pred             cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHH-----------ccCcCCCCEECCHHHhhccc---ccHHHHHHHHH
Confidence            479999999998753       499999999 889           68999999999998875420   01133333333


Q ss_pred             HcCCC--CCCCEEEecCCc-HHHHHHHHHHHh----cC--CCCceeeeCcHHHHhCCCCCCCc
Q 020963          263 QEGIS--LEKPVVTACGTG-VTACILALGLNR----LG--KHDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       263 ~~~~~--~~~~vivyC~~G-~ra~~~~~~L~~----~G--~~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                      +.+++  ++++|||||.+| .|+..++..|..    .|  +.+|++|+||+.+|..++ .|.+
T Consensus        96 ~~~~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~-~~~~  157 (169)
T 3f4a_A           96 EKQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVY-GDDE  157 (169)
T ss_dssp             HHHHTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHH-TTCT
T ss_pred             hhcccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHc-CCcc
Confidence            32222  247999999987 888877755533    35  568999999999999985 5554

>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}

Probab=99.67  E-value=3.3e-17  Score=141.97  Aligned_cols=99  Identities=14%  Similarity=0.195  Sum_probs=78.5

Q ss_pred             cccCHHHHHHHhhcC------CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  263 (319)
Q Consensus       190 ~~is~~~l~~~~~~~------~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~  263 (319)
                      ..|+++++.++++.+      +++|||||++.||           ..||||||+|||+.+.            +.+.+.+
T Consensus        57 ~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey-----------~~GHIpGAinIP~~~~------------l~~~l~~  113 (216)
T 3op3_A           57 KYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEY-----------LGGHIQGALNLYSQEE------------LFNFFLK  113 (216)
T ss_dssp             EEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTSEETTCEECCSHHH------------HHHHHTS
T ss_pred             CEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHH-----------hcCCccCCEECChHHH------------HHHHHhh
Confidence            479999999999765      6899999999999           5899999999998542            2333322


Q ss_pred             cC---CCCCC--CEEEecC-CcHHHHHHHHHHHhc----------CCCCceeeeCcHHHHhCCC
Q 020963          264 EG---ISLEK--PVVTACG-TGVTACILALGLNRL----------GKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       264 ~~---~~~~~--~vivyC~-~G~ra~~~~~~L~~~----------G~~~v~~~~Gg~~~W~~~~  311 (319)
                      .+   .++++  +|||||. +|.||..++..|+..          ||.+|++|+||+.+|....
T Consensus       114 ~~~~~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~  177 (216)
T 3op3_A          114 KPIVPLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY  177 (216)
T ss_dssp             SCCCCSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred             ccccccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence            11   23344  4999999 999999999999875          8999999999999999863

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*

Probab=99.67  E-value=1.6e-17  Score=138.87  Aligned_cols=115  Identities=17%  Similarity=0.192  Sum_probs=80.8

Q ss_pred             CCcccHHHHHHhcCCC-------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 020963           21 EPVVSVDWLHANLREP-------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA   93 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~-------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~   93 (319)
                      .+.||+++|.++++++       +++|||||         . .+|..||||||+|||+..+...       .+..+++.+
T Consensus        30 ~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR---------~-~Ey~~GHIpGAiniP~~~l~~~-------~~~l~~l~~   92 (169)
T 3f4a_A           30 VKYLDPTELHRWMQEGHTTTLREPFQVVDVR---------G-SDYMGGHIKDGWHYAYSRLKQD-------PEYLRELKH   92 (169)
T ss_dssp             EEEECHHHHHHHHHHTSCTTTCCCEEEEECC---------S-TTCTTCEETTCEECCHHHHHHC-------HHHHHHHHH
T ss_pred             CcEeCHHHHHHHHhcCCccCcCCCEEEEECC---------c-hHHccCcCCCCEECCHHHhhcc-------cccHHHHHH
Confidence            4689999999999753       49999998         6 7899999999999999876431       000122322


Q ss_pred             HHHhCCC--CCCCeEEEEcCCCcchhHHHHHHHHH----hc--CCceEEecCCHHHHHhCCCCcccC
Q 020963           94 AVSALGL--ENKDGLVVYDGKGIFSAARVWWMFRV----FG--HDRVWVLDGGLPRWRASGYDVESS  152 (319)
Q Consensus        94 ~~~~~~i--~~~~~vvly~~~g~~~a~~~~~~l~~----~G--~~~v~~l~GG~~~W~~~g~p~~~~  152 (319)
                      .+...++  .++++|||||..|..++.+++..|..    .|  +.+|++|+||+.+|.+++.+.+..
T Consensus        93 ~~~~~~~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~~  159 (169)
T 3f4a_A           93 RLLEKQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDESV  159 (169)
T ss_dssp             HHHHHHHTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTTT
T ss_pred             HHHhhcccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcccc
Confidence            2222212  22479999998874456666544433    36  578999999999999998776543

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=99.67  E-value=7.7e-17  Score=155.86  Aligned_cols=102  Identities=25%  Similarity=0.392  Sum_probs=89.4

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      .+.|++++|.+++++++++|||+|         +..+|..||||||+|+|+..+...                 +.  ++
T Consensus       373 ~~~i~~~~l~~~~~~~~~~lvDvR---------~~~e~~~ghIpgA~~ip~~~l~~~-----------------~~--~l  424 (474)
T 3tp9_A          373 YANVSPDEVRGALAQQGLWLLDVR---------NVDEWAGGHLPQAHHIPLSKLAAH-----------------IH--DV  424 (474)
T ss_dssp             CEEECHHHHHHTTTTTCCEEEECS---------CHHHHHHCBCTTCEECCHHHHTTT-----------------GG--GS
T ss_pred             ccccCHHHHHHHhcCCCcEEEECC---------CHHHHhcCcCCCCEECCHHHHHHH-----------------Hh--cC
Confidence            467999999999988789999999         789999999999999999766431                 11  35


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCccc
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                      +++++||+||.+|. +|+.+++.|+.+||++|++|+||+.+|.++|+|+++
T Consensus       425 ~~~~~vvv~C~~G~-ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~  474 (474)
T 3tp9_A          425 PRDGSVCVYCRTGG-RSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA  474 (474)
T ss_dssp             CSSSCEEEECSSSH-HHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred             CCCCEEEEECCCCH-HHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence            78899999999876 489999999999999999999999999999999864

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}

Probab=99.66  E-value=4.7e-17  Score=134.50  Aligned_cols=106  Identities=13%  Similarity=0.191  Sum_probs=79.2

Q ss_pred             ccccCHHHHHHHhh--------cCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCccccc-----CCCCCCCCHH
Q 020963          189 HLIWTLEQVKRNIE--------EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML-----DASQTLLPAD  255 (319)
Q Consensus       189 ~~~is~~~l~~~~~--------~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~-----~~~~~~~~~~  255 (319)
                      ...|++++|.+.++        +++++|||||++.||           ..||||||+|+|+..+.     ... .+ +  
T Consensus        10 ~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~-----------~~ghI~ga~~i~~~~l~~~~~~~~~-~~-~--   74 (158)
T 3tg1_B           10 IKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEY-----------NKSHIQGAVHINCADKISRRRLQQG-KI-T--   74 (158)
T ss_dssp             -CEECHHHHHHHHCC----------CEEEECSCHHHH-----------HHCCBTTCEECCCSSHHHHHHHTTS-SC-C--
T ss_pred             CcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHH-----------HhCCCCCceeechhHHHHHhhhhcC-cc-c--
Confidence            34789999999987        456999999999999           68999999999998864     111 10 0  


Q ss_pred             HHHHHHH------HcCCCCCCCEEEecCCc---------HHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          256 ELKKRFE------QEGISLEKPVVTACGTG---------VTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       256 ~l~~~l~------~~~~~~~~~vivyC~~G---------~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                       +..++.      .....++++|||||.+|         .+|..++..|+..|| ++++|+|||.+|....
T Consensus        75 -~~~~~~~~~~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~  143 (158)
T 3tg1_B           75 -VLDLISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH  143 (158)
T ss_dssp             -HHHHTCCCCSSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSC
T ss_pred             -HHhhcCCHHHHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHh
Confidence             000110      01123588999999999         469999999999999 6999999999998873

>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}

Probab=99.65  E-value=2e-16  Score=137.02  Aligned_cols=103  Identities=18%  Similarity=0.137  Sum_probs=78.8

Q ss_pred             CCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 020963           20 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA   93 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~   93 (319)
                      ..+.|++++|.++++++      +++|||||         ...+|..||||||+|||+..                .+.+
T Consensus        55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR---------~~~Ey~~GHIpGAinIP~~~----------------~l~~  109 (216)
T 3op3_A           55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCR---------YPYEYLGGHIQGALNLYSQE----------------ELFN  109 (216)
T ss_dssp             SSEEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTSEETTCEECCSHH----------------HHHH
T ss_pred             CCCEeCHHHHHHHHhCCCccccCCEEEEEeC---------cHHHHhcCCccCCEECChHH----------------HHHH
Confidence            35789999999999875      68999999         67899999999999999853                2222


Q ss_pred             HHHhCC---CCCCC--eEEEEcC-CCcchhHHHHHHHHHh----------cCCceEEecCCHHHHHhCCCC
Q 020963           94 AVSALG---LENKD--GLVVYDG-KGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRASGYD  148 (319)
Q Consensus        94 ~~~~~~---i~~~~--~vvly~~-~g~~~a~~~~~~l~~~----------G~~~v~~l~GG~~~W~~~g~p  148 (319)
                      .+...+   .++++  +||+||. +|.+ +..++..|+..          ||++|++|+||+.+|.++...
T Consensus       110 ~l~~~~~~~~~~~k~~~VVvyC~~SG~R-s~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~  179 (216)
T 3op3_A          110 FFLKKPIVPLDTQKRIIIVFHCEFSSER-GPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYME  179 (216)
T ss_dssp             HHTSSCCCCSSTTSEEEEEEECCC--CC-HHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGG
T ss_pred             HHhhccccccccCCCCEEEEEeCCCChH-HHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcc
Confidence            332211   22333  4999999 6665 88888888877          899999999999999987543

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}

Probab=99.65  E-value=3.8e-16  Score=129.03  Aligned_cols=115  Identities=18%  Similarity=0.306  Sum_probs=78.2

Q ss_pred             CCCCCcccHHHHHHhcC--------CCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccc----cCCCCC--C
Q 020963           18 SPKEPVVSVDWLHANLR--------EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD----RTTNLP--H   83 (319)
Q Consensus        18 ~~~~~~Is~~~l~~~l~--------~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~----~~~~~~--~   83 (319)
                      ......|++++|.++++        +++++|||||         +..+|..||||||+|+|+..+..    ....+.  .
T Consensus         7 ~~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR---------~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~   77 (158)
T 3tg1_B            7 LASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCR---------PFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLD   77 (158)
T ss_dssp             ----CEECHHHHHHHHCC----------CEEEECS---------CHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHH
T ss_pred             CCCCcEecHHHHHHHHHhcccccCCCCCEEEEEcC---------CHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHh
Confidence            34467899999999998        4469999999         78899999999999999987520    000000  0


Q ss_pred             CCCCHHHHHHHHHhCCCCCCCeEEEEcCCCcc--------hhHHHHHHHHHhcCCceEEecCCHHHHHhCC
Q 020963           84 MLPSEEAFAAAVSALGLENKDGLVVYDGKGIF--------SAARVWWMFRVFGHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus        84 ~~~~~~~~~~~~~~~~i~~~~~vvly~~~g~~--------~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  146 (319)
                      .++..+. .   ..+...++++|||||..|..        .+..++..|+..|| +|++|+|||.+|.+..
T Consensus        78 ~~~~~~~-~---~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~  143 (158)
T 3tg1_B           78 LISCREG-K---DSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH  143 (158)
T ss_dssp             HTCCCCS-S---CSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSC
T ss_pred             hcCCHHH-H---HHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHh
Confidence            0000000 0   01112247899999988742        47889999999999 6999999999997653

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4

Probab=99.64  E-value=4.4e-16  Score=128.54  Aligned_cols=121  Identities=18%  Similarity=0.244  Sum_probs=82.9

Q ss_pred             CCCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCC--CCCCCCCCHHHHHHH
Q 020963           19 PKEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--NLPHMLPSEEAFAAA   94 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~--~~~~~~~~~~~~~~~   94 (319)
                      .....|++++|.++++++  +++|||||         +..+|..||||||+|||+..+.....  .+...+|..  ..+.
T Consensus        12 ~~~~~i~~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~--~~~~   80 (157)
T 1whb_A           12 KEKGAITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDD--SKDT   80 (157)
T ss_dssp             CCCSEECHHHHHHHHTCSSSCEEEEEES---------CHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTT--HHHH
T ss_pred             ccCCccCHHHHHHHHhcCCCCeEEEECC---------CHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChH--HHHH
Confidence            446789999999999876  89999999         78899999999999999876532100  011122321  1233


Q ss_pred             HHhCCCCCCCeEEEEcCCCcc---hhHHHHHHHHH----h----cCC-ceEEecCCHHHHHhCCCCcccCC
Q 020963           95 VSALGLENKDGLVVYDGKGIF---SAARVWWMFRV----F----GHD-RVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        95 ~~~~~i~~~~~vvly~~~g~~---~a~~~~~~l~~----~----G~~-~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      +...+  +...|||||..+..   .++++.+.|..    +    |+. +|++|+|||.+|.+. +|.....
T Consensus        81 ~~~~~--~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~  148 (157)
T 1whb_A           81 WKKRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTN  148 (157)
T ss_dssp             HHGGG--TSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSC
T ss_pred             HHhcC--CCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCC
Confidence            33332  34568888876643   34566677662    2    444 499999999999985 8877653

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4

Probab=99.61  E-value=5.1e-16  Score=128.14  Aligned_cols=119  Identities=18%  Similarity=0.237  Sum_probs=80.0

Q ss_pred             CCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCC--CCCCCCCCHHHHHHHH
Q 020963           20 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--NLPHMLPSEEAFAAAV   95 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~--~~~~~~~~~~~~~~~~   95 (319)
                      ....|++++|.++++++  +++|||||         +..+|..||||||+|||+..+.....  .+...+|.  ...+.+
T Consensus        18 ~~~~is~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~--~~~~l~   86 (157)
T 2gwf_A           18 GSGAITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPD--DSKDTW   86 (157)
T ss_dssp             -CCEECHHHHHHHHHSTTSCEEEEECS---------CHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCH--HHHHHH
T ss_pred             CCCccCHHHHHHHHhcCCCCeEEEECC---------CHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCH--HHHHHH
Confidence            35689999999999866  89999999         78899999999999999876532100  01112221  122333


Q ss_pred             HhCCCCCCCeEEEEcCCCcc---hhHHHHHHHH----Hh----cCC-ceEEecCCHHHHHhCCCCcccC
Q 020963           96 SALGLENKDGLVVYDGKGIF---SAARVWWMFR----VF----GHD-RVWVLDGGLPRWRASGYDVESS  152 (319)
Q Consensus        96 ~~~~i~~~~~vvly~~~g~~---~a~~~~~~l~----~~----G~~-~v~~l~GG~~~W~~~g~p~~~~  152 (319)
                      ...+  +...|||||..+..   .++++++.|.    .+    |+. +|++|+|||.+|.+. +|....
T Consensus        87 ~~~~--~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~  152 (157)
T 2gwf_A           87 KKRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTT  152 (157)
T ss_dssp             HTTT--TSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBS
T ss_pred             HhcC--CCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcC
Confidence            3332  44568888876643   3455566655    22    344 499999999999984 776553

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*

Probab=99.60  E-value=2.4e-16  Score=156.20  Aligned_cols=99  Identities=22%  Similarity=0.374  Sum_probs=84.8

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      ..|+++++.+.++ ++++|||||++.||           ..||||||+|||++++...             +.  .++++
T Consensus       489 ~~i~~~~~~~~~~-~~~~~iDvR~~~e~-----------~~ghi~ga~~ip~~~l~~~-------------~~--~l~~~  541 (588)
T 3ics_A          489 DTVQWHEIDRIVE-NGGYLIDVREPNEL-----------KQGMIKGSINIPLDELRDR-------------LE--EVPVD  541 (588)
T ss_dssp             CEECTTTHHHHHH-TTCEEEECSCGGGG-----------GGCBCTTEEECCHHHHTTC-------------GG--GSCSS
T ss_pred             ceecHHHHHHHhc-CCCEEEEcCCHHHH-----------hcCCCCCCEECCHHHHHHH-------------Hh--hCCCC
Confidence            3678888888885 46899999999999           6899999999999776543             22  57889


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCc
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                      ++||+||++|.||..+++.|+.+||+ |++|+|||.+|......+++
T Consensus       542 ~~iv~~C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~~~~~~  587 (588)
T 3ics_A          542 KDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTVLPERIV  587 (588)
T ss_dssp             SCEEEECSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHHCGGGCB
T ss_pred             CeEEEECCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhhhhhhcc
Confidence            99999999999999999999999998 99999999999987544544

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*

Probab=99.60  E-value=3.3e-16  Score=154.28  Aligned_cols=91  Identities=15%  Similarity=0.259  Sum_probs=77.5

Q ss_pred             cCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 020963          192 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  271 (319)
Q Consensus       192 is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~  271 (319)
                      |+++++.+.  .++++|||||++.||           ..||||||+|+|++++....             .  .++++++
T Consensus       475 i~~~~~~~~--~~~~~~iDvR~~~e~-----------~~~~i~ga~~ip~~~l~~~~-------------~--~~~~~~~  526 (565)
T 3ntd_A          475 IHFDQIDNL--SEDQLLLDVRNPGEL-----------QNGGLEGAVNIPVDELRDRM-------------H--ELPKDKE  526 (565)
T ss_dssp             ECTTTTTSC--CTTEEEEECSCGGGG-----------GGCCCTTCEECCGGGTTTSG-------------G--GSCTTSE
T ss_pred             eeHHHHHhC--CCCcEEEEeCCHHHH-----------hcCCCCCcEECCHHHHHHHH-------------h--hcCCcCe
Confidence            455555444  457899999999999           67899999999998875432             2  4788999


Q ss_pred             EEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          272 VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       272 vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                      ||+||++|.||..+++.|+.+|| +|++|+||+.+|..+|
T Consensus       527 iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g  565 (565)
T 3ntd_A          527 IIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS  565 (565)
T ss_dssp             EEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred             EEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence            99999999999999999999999 8999999999998763

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4

Probab=99.52  E-value=7e-15  Score=121.26  Aligned_cols=112  Identities=15%  Similarity=0.149  Sum_probs=78.0

Q ss_pred             ccccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCC------CCCCHHHHHHH
Q 020963          189 HLIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ------TLLPADELKKR  260 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~------~~~~~~~l~~~  260 (319)
                      ...|+++++.+.++.+  +++|||||++.||           ..||||||+|||+..+.....      .+.+  ..+++
T Consensus        14 ~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHI~gainip~~~~~~~~~~~~l~~~lp~--~~~~~   80 (157)
T 1whb_A           14 KGAITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLPD--DSKDT   80 (157)
T ss_dssp             CSEECHHHHHHHHTCSSSCEEEEEESCHHHH-----------HHCCBTTCEEECSSSCCTTCCHHHHHHSCCT--THHHH
T ss_pred             CCccCHHHHHHHHhcCCCCeEEEECCCHHHH-----------HhccccCCcccCHHHccCCCcHHHHHHHCCh--HHHHH
Confidence            4578999999998766  7999999999999           689999999999976632210      1111  11233


Q ss_pred             HHHcCCCCCCCEEEecCCcHH----HHHHHHHHHh----c----CCC-CceeeeCcHHHHhCCCCCCCcc
Q 020963          261 FEQEGISLEKPVVTACGTGVT----ACILALGLNR----L----GKH-DVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       261 l~~~~~~~~~~vivyC~~G~r----a~~~~~~L~~----~----G~~-~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      +.+.+  +.+.||+||..|.+    ++.+++.|..    +    |+. +|++++||+.+|...  +|+..
T Consensus        81 ~~~~~--~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~--~p~~~  146 (157)
T 1whb_A           81 WKKRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC--YPQYT  146 (157)
T ss_dssp             HHGGG--TSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH--CGGGB
T ss_pred             HHhcC--CCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH--Chhhh
Confidence            33222  34569999987753    4555666652    2    454 499999999999974  66654

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4

Probab=99.51  E-value=1.1e-14  Score=120.22  Aligned_cols=112  Identities=16%  Similarity=0.172  Sum_probs=77.4

Q ss_pred             cccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCC-----CCCCHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ-----TLLPADELKKRFE  262 (319)
Q Consensus       190 ~~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~-----~~~~~~~l~~~l~  262 (319)
                      ..|+++++.+.++.+  +++|||||++.||           ..||||||+|||+..+.....     ...+ +..++++.
T Consensus        20 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHI~gAinip~~~l~~~~~~~~l~~~lp-~~~~~l~~   87 (157)
T 2gwf_A           20 GAITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLP-DDSKDTWK   87 (157)
T ss_dssp             CEECHHHHHHHHHSTTSCEEEEECSCHHHH-----------HHSCBTTCEECCGGGCCTTCCHHHHHHTSC-HHHHHHHH
T ss_pred             CccCHHHHHHHHhcCCCCeEEEECCCHHHH-----------HhcCccCCcccCHHHcCCCCcHHHHHHHcC-HHHHHHHH
Confidence            478999999998866  7999999999999           689999999999987643210     0111 12233444


Q ss_pred             HcCCCCCCCEEEecCCcHH----HHHHHHHHH----hc----CCC-CceeeeCcHHHHhCCCCCCCcc
Q 020963          263 QEGISLEKPVVTACGTGVT----ACILALGLN----RL----GKH-DVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       263 ~~~~~~~~~vivyC~~G~r----a~~~~~~L~----~~----G~~-~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      .  ..+.+.||+||..|.+    ++.+++.|.    .+    |+. +|++++||+.+|...  +|+..
T Consensus        88 ~--~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~--~p~~~  151 (157)
T 2gwf_A           88 K--RGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC--YPQYT  151 (157)
T ss_dssp             T--TTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH--CGGGB
T ss_pred             h--cCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH--Chhhc
Confidence            2  2345569999987753    344455544    22    344 499999999999974  67653

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*

Probab=99.50  E-value=1.4e-14  Score=142.57  Aligned_cols=95  Identities=20%  Similarity=0.299  Sum_probs=79.9

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      ..+.|++++|.++  +++++|||||         +..+|..||||||+|+|+..+...                 +.  .
T Consensus       471 ~~~~i~~~~~~~~--~~~~~~iDvR---------~~~e~~~~~i~ga~~ip~~~l~~~-----------------~~--~  520 (565)
T 3ntd_A          471 DATPIHFDQIDNL--SEDQLLLDVR---------NPGELQNGGLEGAVNIPVDELRDR-----------------MH--E  520 (565)
T ss_dssp             SCCEECTTTTTSC--CTTEEEEECS---------CGGGGGGCCCTTCEECCGGGTTTS-----------------GG--G
T ss_pred             ccceeeHHHHHhC--CCCcEEEEeC---------CHHHHhcCCCCCcEECCHHHHHHH-----------------Hh--h
Confidence            3467888888877  5579999999         678999999999999999876441                 11  1


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  146 (319)
                      ++++++||+||.+|. ++.++++.|+.+|| +|++|+||+.+|+++|
T Consensus       521 ~~~~~~iv~~c~~g~-rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g  565 (565)
T 3ntd_A          521 LPKDKEIIIFSQVGL-RGNVAYRQLVNNGY-RARNLIGGYRTYKFAS  565 (565)
T ss_dssp             SCTTSEEEEECSSSH-HHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred             cCCcCeEEEEeCCch-HHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence            468899999998775 48999999999999 9999999999999875

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*

Probab=99.45  E-value=3.7e-14  Score=140.46  Aligned_cols=97  Identities=15%  Similarity=0.140  Sum_probs=81.5

Q ss_pred             CCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           19 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      ...+.|++++|.+++++ +++|||||         +..+|..||||||+|+|+..+...                 +.. 
T Consensus       486 ~~~~~i~~~~~~~~~~~-~~~~iDvR---------~~~e~~~ghi~ga~~ip~~~l~~~-----------------~~~-  537 (588)
T 3ics_A          486 GFVDTVQWHEIDRIVEN-GGYLIDVR---------EPNELKQGMIKGSINIPLDELRDR-----------------LEE-  537 (588)
T ss_dssp             TSCCEECTTTHHHHHHT-TCEEEECS---------CGGGGGGCBCTTEEECCHHHHTTC-----------------GGG-
T ss_pred             cccceecHHHHHHHhcC-CCEEEEcC---------CHHHHhcCCCCCCEECCHHHHHHH-----------------Hhh-
Confidence            44678999999999865 68999999         678999999999999998766431                 112 


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCC
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  146 (319)
                       ++++++||+||.+|. ++.++++.|+.+||+ |++|+||+.+|.+..
T Consensus       538 -l~~~~~iv~~C~~g~-rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~~  582 (588)
T 3ics_A          538 -VPVDKDIYITCQLGM-RGYVAARMLMEKGYK-VKNVDGGFKLYGTVL  582 (588)
T ss_dssp             -SCSSSCEEEECSSSH-HHHHHHHHHHHTTCC-EEEETTHHHHHHHHC
T ss_pred             -CCCCCeEEEECCCCc-HHHHHHHHHHHcCCc-EEEEcchHHHHHhhh
Confidence             467899999998775 589999999999998 999999999998753

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.42  E-value=1.4e-14  Score=139.77  Aligned_cols=87  Identities=13%  Similarity=0.160  Sum_probs=0.0

Q ss_pred             HHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCCCCCeEEE
Q 020963           29 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVV  108 (319)
Q Consensus        29 l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~vvl  108 (319)
                      +.+++++++++|||||         +..+|..||||||+|+|+..+..                 .+..  ++++++||+
T Consensus       379 ~~~~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~-----------------~~~~--l~~~~~iv~  430 (466)
T 3r2u_A          379 HSEDITGNESHILDVR---------NDNEWNNGHLSQAVHVPHGKLLE-----------------TDLP--FNKNDVIYV  430 (466)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHhCCCcEEEEeC---------CHHHHhcCcCCCCEECCHHHHHH-----------------HHhh--CCCCCeEEE
Confidence            5666666679999999         77899999999999999986643                 1112  467889999


Q ss_pred             EcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh
Q 020963          109 YDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  144 (319)
Q Consensus       109 y~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~  144 (319)
                      ||.+|.+ |+.+++.|+.+||++|++|+||+.+|++
T Consensus       431 ~C~~G~r-s~~a~~~L~~~G~~~v~~l~GG~~~W~~  465 (466)
T 3r2u_A          431 HCQSGIR-SSIAIGILEHKGYHNIINVNEGYKDIQL  465 (466)
T ss_dssp             ------------------------------------
T ss_pred             ECCCChH-HHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence            9987764 8899999999999999999999999975

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=97.68  E-value=6.2e-05  Score=61.14  Aligned_cols=96  Identities=18%  Similarity=0.214  Sum_probs=55.4

Q ss_pred             cCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCC---CCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 020963          192 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR---KGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  268 (319)
Q Consensus       192 is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~---~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~  268 (319)
                      ++.+++..+.+.+-..|||+|++.|.... +...   ...+..+|.|.+|+|.... .     .+.+.+.+.++... ..
T Consensus        30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~-p~~~~~~~~~~~~gi~~~~~iPv~~~-~-----~~~~~~~~~~~~l~-~~  101 (156)
T 2f46_A           30 LTKADAEQIAQLGIKTIICNRPDREEESQ-PDFAQIKQWLEQAGVTGFHHQPVTAR-D-----IQKHDVETFRQLIG-QA  101 (156)
T ss_dssp             CCGGGHHHHHHHTCCEEEECSCTTSSTTC-CCHHHHHHHHGGGTCCEEEECCCCTT-T-----CCHHHHHHHHHHHH-TS
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCccccCC-CcHHHHHHHHHHCCCHhheECccCCC-C-----CCHHHHHHHHHHHH-hC
Confidence            45666665555455779999987763110 0000   0001235888899998642 1     23345554443221 24


Q ss_pred             CCCEEEecCCcHHHHHHHHH-HHhcCCC
Q 020963          269 EKPVVTACGTGVTACILALG-LNRLGKH  295 (319)
Q Consensus       269 ~~~vivyC~~G~ra~~~~~~-L~~~G~~  295 (319)
                      ++||+|||.+|.|+..++.+ |...|+.
T Consensus       102 ~~pVlvHC~sG~Rs~~l~al~l~~~g~~  129 (156)
T 2f46_A          102 EYPVLAYCRTGTRCSLLWGFRRAAEGMP  129 (156)
T ss_dssp             CSSEEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHcCCC
Confidence            78999999999998865444 3446654

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=96.76  E-value=0.0015  Score=52.79  Aligned_cols=95  Identities=8%  Similarity=0.022  Sum_probs=51.2

Q ss_pred             cccHHHHHHhcCCCCeEEEEeecCCCCCCC-Cc--hhhhhhc-CCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           23 VVSVDWLHANLREPDLKVLDASWYMPDEQR-NP--FQEYQVA-HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        23 ~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r-~~--~~~~~~g-hIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      .++++++..+.+.+-..|||+|...-.... +.  ..++..+ +|+|.+++|+...          .++.+.+.+.+..+
T Consensus        29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~----------~~~~~~~~~~~~~l   98 (156)
T 2f46_A           29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR----------DIQKHDVETFRQLI   98 (156)
T ss_dssp             CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT----------TCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC----------CCCHHHHHHHHHHH
Confidence            356777776655444689999921100000 00  0123344 5999999998632          12344555443332


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHH-HHHhcC
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWM-FRVFGH  129 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~-l~~~G~  129 (319)
                      . ..+.+|++||..|.+ ++.++.+ +...|+
T Consensus        99 ~-~~~~pVlvHC~sG~R-s~~l~al~l~~~g~  128 (156)
T 2f46_A           99 G-QAEYPVLAYCRTGTR-CSLLWGFRRAAEGM  128 (156)
T ss_dssp             H-TSCSSEEEECSSSHH-HHHHHHHHHHHTTC
T ss_pred             H-hCCCCEEEECCCCCC-HHHHHHHHHHHcCC
Confidence            1 246899999999885 4433322 234454

>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A

Probab=91.91  E-value=0.47  Score=37.00  Aligned_cols=87  Identities=16%  Similarity=0.206  Sum_probs=45.8

Q ss_pred             CHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCC--cccCcccccCCCCCCCCHHHHHHHHHHc--CCCC
Q 020963          193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTLLPADELKKRFEQE--GISL  268 (319)
Q Consensus       193 s~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA--~~ip~~~l~~~~~~~~~~~~l~~~l~~~--~~~~  268 (319)
                      +.+++..+.+.+=..|||+|+..+..           ....+|-  .++|+.+..     ..+.+.+.+.+...  .+..
T Consensus        24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~-----------~~~~~~~~~~~~~~~d~~-----~~~~~~~~~~~~~i~~~~~~   87 (150)
T 4erc_A           24 LPAHYQFLLDLGVRHLVSLTERGPPH-----------SDSCPGLTLHRLRIPDFC-----PPAPDQIDRFVQIVDEANAR   87 (150)
T ss_dssp             SHHHHHHHHHTTEEEEEECSSSCCTT-----------GGGCTTSEEEECCCCTTS-----CCCHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHCCCCEEEEcCCCCCCc-----------ccccCCceEEEEecCCCC-----CCCHHHHHHHHHHHHHHHHC
Confidence            35555544444446799999876541           1222222  244544432     22334444333311  1235


Q ss_pred             CCCEEEecCCcH-HHH-HHHH-HHHhcCCC
Q 020963          269 EKPVVTACGTGV-TAC-ILAL-GLNRLGKH  295 (319)
Q Consensus       269 ~~~vivyC~~G~-ra~-~~~~-~L~~~G~~  295 (319)
                      +.+|+|+|..|. |+. .++. ++...|+.
T Consensus        88 ~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~~  117 (150)
T 4erc_A           88 GEAVGVHCALGFGRTGTMLACYLVKERGLA  117 (150)
T ss_dssp             TCEEEEECSSSSHHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence            689999999996 666 3333 34556763

>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A

Probab=89.80  E-value=0.29  Score=38.48  Aligned_cols=96  Identities=8%  Similarity=-0.023  Sum_probs=46.5

Q ss_pred             HHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEE
Q 020963          194 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  273 (319)
Q Consensus       194 ~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~vi  273 (319)
                      .+++..+.+.+=..|||+|+..+....   +......| | .-+++|..+...+ ..-...+.+.+.++...-..+.+|+
T Consensus        23 ~~d~~~L~~~gi~~Vi~l~~~~e~~~~---~~~~~~~g-i-~~~~ipi~d~~~~-~~~~~~~~~~~~~~~i~~~~~~~vl   96 (151)
T 1xri_A           23 SANFSFLQTLGLRSIIYLCPEPYPESN---LQFLKSNG-I-RLFQFGIEGNKEP-FVNIPDHKIRMALKVLLDEKNHPVL   96 (151)
T ss_dssp             HHHHHHHHHHTCSEEEECCSSCCCHHH---HHHHHHHT-C-EEEECCCCCCCGG-GCCCCHHHHHHHHHHHHCGGGCSEE
T ss_pred             ccCHHHHHHCCCCEEEECCCCCcChhH---HHHHHhcC-C-eEEecccccccCc-cccCCHHHHHHHHHHHHcCCCCCEE
Confidence            344443333344679999987664210   00000001 1 1134444332110 0112335565555532223578999


Q ss_pred             EecCCcH-HHHHH-HHHHHhcCCC
Q 020963          274 TACGTGV-TACIL-ALGLNRLGKH  295 (319)
Q Consensus       274 vyC~~G~-ra~~~-~~~L~~~G~~  295 (319)
                      |+|..|. |+... +.+|...|+.
T Consensus        97 vHC~aG~~RTg~~~a~~l~~~g~~  120 (151)
T 1xri_A           97 IHCKRGKHRTGCLVGCLRKLQKWC  120 (151)
T ss_dssp             EECSSSSSHHHHHHHHHHHHTTBC
T ss_pred             EECCCCCCHHHHHHHHHHHHhCCC
Confidence            9999996 76644 4445667764

>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}

Probab=86.83  E-value=1.9  Score=33.31  Aligned_cols=86  Identities=14%  Similarity=0.165  Sum_probs=43.5

Q ss_pred             HHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccC--CCcccCcccccCCCCCCCCHHHHHHHHHHc--CCCCC
Q 020963          194 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVP--GSKCIPFPQMLDASQTLLPADELKKRFEQE--GISLE  269 (319)
Q Consensus       194 ~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIp--gA~~ip~~~l~~~~~~~~~~~~l~~~l~~~--~~~~~  269 (319)
                      .+.+..+.+.+=..|||+|+..++..           ..++  +-.++|+.+...     .+.+.+.+.++..  .+..+
T Consensus        26 ~~~~~~l~~~gi~~Vv~l~~~~e~~~-----------~~~~~~~~~~~~~~d~~~-----p~~~~~~~~~~~i~~~~~~~   89 (151)
T 2img_A           26 PAHYQFLLDLGVRHLVSLTERGPPHS-----------DSCPGLTLHRLRIPDFCP-----PAPDQIDRFVQIVDEANARG   89 (151)
T ss_dssp             HHHHHHHHHTTEEEEEECSSSCCTTG-----------GGCTTSEEEECCCCTTCC-----CCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCH-----------HHHhhCCeEEEeCCCCCC-----CCHHHHHHHHHHHHHHHhCC
Confidence            44444444434467999998866421           1111  134555544322     2334444333311  12347


Q ss_pred             CCEEEecCCcH-HHHHH-HHHHH-hcCCC
Q 020963          270 KPVVTACGTGV-TACIL-ALGLN-RLGKH  295 (319)
Q Consensus       270 ~~vivyC~~G~-ra~~~-~~~L~-~~G~~  295 (319)
                      .+|+|+|..|. |+... +..|- ..|+.
T Consensus        90 ~~vlVHC~aG~~Rsg~~~~~~l~~~~~~~  118 (151)
T 2img_A           90 EAVGVHCALGFGRTGTMLACYLVKERGLA  118 (151)
T ss_dssp             CEEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred             CcEEEECCCCCChHHHHHHHHHHHHhCcC
Confidence            89999999885 65533 33333 33653

>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1

Probab=83.09  E-value=0.17  Score=41.28  Aligned_cols=25  Identities=24%  Similarity=0.234  Sum_probs=22.0

Q ss_pred             cEEEeccCCCcccCCCCCCCCCCCccccCCCcccCccccc
Q 020963          206 YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML  245 (319)
Q Consensus       206 ~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~  245 (319)
                      .++||||.+.||           .    |||+|||...+.
T Consensus       122 ~~liDvRe~~E~-----------~----pgA~~iprg~lE  146 (168)
T 1v8c_A          122 GAVVRFREVEPL-----------K----VGSLSIPQLRVE  146 (168)
T ss_dssp             TEEEEEEEEEEE-----------E----ETTEEEEEEEEE
T ss_pred             eEEEECCChhhc-----------C----CCCEEcChhHHH
Confidence            589999999999           4    999999988764

>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A

Probab=81.63  E-value=2.7  Score=32.72  Aligned_cols=43  Identities=12%  Similarity=0.074  Sum_probs=26.4

Q ss_pred             CHHHHHHHHHhCCCCCCCeEEEEcCCCc-chhHHHHHHHHHhcC
Q 020963           87 SEEAFAAAVSALGLENKDGLVVYDGKGI-FSAARVWWMFRVFGH  129 (319)
Q Consensus        87 ~~~~~~~~~~~~~i~~~~~vvly~~~g~-~~a~~~~~~l~~~G~  129 (319)
                      +.+.+.+.+..+--..+.+|+++|..|. ++...++.+|...|+
T Consensus        76 ~~~~~~~~~~~i~~~~~~~vlvHC~aG~~RTg~~~a~~l~~~g~  119 (151)
T 1xri_A           76 PDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKW  119 (151)
T ss_dssp             CHHHHHHHHHHHHCGGGCSEEEECSSSSSHHHHHHHHHHHHTTB
T ss_pred             CHHHHHHHHHHHHcCCCCCEEEECCCCCCHHHHHHHHHHHHhCC
Confidence            4556666665543235689999999885 444445555555555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	319
d1okga1	156	c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransf	2e-35
d1okga1	156	c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransf	0.003
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	4e-35
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	1e-07
d1rhsa1	149	c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [Ta	6e-34
d1rhsa1	149	c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [Ta	0.001
d1urha1	147	c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransf	1e-32
d1urha1	147	c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransf	2e-08
d1okga2	139	c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtran	4e-29
d1okga2	139	c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtran	1e-06
d1uara2	141	c.46.1.2 (A:145-285) Sulfurtransferase {Thermus th	1e-27
d1uara2	141	c.46.1.2 (A:145-285) Sulfurtransferase {Thermus th	1e-06
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	5e-27
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	5e-06
d1e0ca2	136	c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacte	6e-25
d1e0ca2	136	c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacte	3e-11
d1uara1	143	c.46.1.2 (A:2-144) Sulfurtransferase {Thermus ther	2e-23
d1uara1	143	c.46.1.2 (A:2-144) Sulfurtransferase {Thermus ther	2e-07
d1hzma_	154	c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat	3e-16
d1hzma_	154	c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat	0.003
d1e0ca1	135	c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter	2e-13
d1e0ca1	135	c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter	9e-06
d2gwfa1	135	c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal h	7e-10
d1gmxa_	108	c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia	9e-09
d1gmxa_	108	c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia	2e-08
d1tq1a_	119	c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senesc	4e-08
d1tq1a_	119	c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senesc	1e-05
d1yt8a3	157	c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase	2e-07
d1t3ka_	132	c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {	4e-07
d1yt8a2	101	c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase P	5e-07
d1yt8a1	136	c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase	2e-06
d1c25a_	161	c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId:	0.004

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 156

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score =  123 bits (310), Expect = 2e-35
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 19  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR- 77
           P +  +    +  +L   + +++D  + +  +  +   +Y   H+  A+  DVD    + 
Sbjct: 5   PGKVFLDPSEVADHLA--EYRIVDCRYSLKIK-DHGSIQYAKEHVKSAIRADVDTNLSKL 61

Query: 78  --TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWV 134
             T+   H LP    F     A G+  +  ++ YD + G     R+WWM    G D  +V
Sbjct: 62  VPTSTARHPLPPCAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGAD-AYV 120

Query: 135 LDGGLPRWRASGYDVES 151
           ++GG    +A+G ++ES
Sbjct: 121 INGGFQACKAAGLEMES 137

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 156

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 14/131 (10%)

Query: 195 EQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ----- 249
            +V  ++ E  Y++VD R                   HV  +        L         
Sbjct: 13  SEVADHLAE--YRIVDCRY---SLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTA 67

Query: 250 --TLLPADELKKRFEQEGISLEKP-VVTACGTGVTACILALGLNRLGKHDVAVYDGSWTE 306
              L P  E        G++ E P +      G         +      D  V +G +  
Sbjct: 68  RHPLPPCAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGADAYVINGGFQA 127

Query: 307 WGAQPDTPVET 317
             A     +E+
Sbjct: 128 CKAA-GLEMES 137

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  122 bits (307), Expect = 4e-35
 Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 3/140 (2%)

Query: 181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCI 239
            F+      L+ T EQV  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +
Sbjct: 2   IFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNM 61

Query: 240 PFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAV 299
           PF   L         +EL+  FE + + L KP++  C  GVTAC +AL     GK DVA+
Sbjct: 62  PFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAI 121

Query: 300 YDGSWTEWG--AQPDTPVET 317
           YDGSW EW   A P+T V  
Sbjct: 122 YDGSWFEWFHRAPPETWVSQ 141

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 2/128 (1%)

Query: 20  KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 79
           +  + + + +  NL     +++D+          P  +  V    G +   V+       
Sbjct: 9   RSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDA-VGLDSGHIRGSVNMPFMNFL 67

Query: 80  NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL 139
                  S E   A   A  ++    L+    KG  +A  +     + G   V + DG  
Sbjct: 68  TEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKG-VTACHIALAAYLCGKPDVAIYDGSW 126

Query: 140 PRWRASGY 147
             W     
Sbjct: 127 FEWFHRAP 134

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 149

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  119 bits (300), Expect = 6e-34
 Identities = 66/139 (47%), Positives = 81/139 (58%), Gaps = 7/139 (5%)

Query: 22  PVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 77
            +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+
Sbjct: 8   ALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDK 66

Query: 78  TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVL 135
            +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL
Sbjct: 67  ASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVL 126

Query: 136 DGGLPRWRASGYDVESSAS 154
           +GG   W   G+ V S  S
Sbjct: 127 NGGFRNWLKEGHPVTSEPS 145

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 149

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 28/133 (21%), Positives = 43/133 (32%), Gaps = 11/133 (8%)

Query: 192 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS--- 248
           W  E V+        +++DA     +     E RK     HVPG+      +  D +   
Sbjct: 14  WLAESVRAGKVGPGLRVLDASW---YSPGTREARKEYLERHVPGASFFDIEECRDKASPY 70

Query: 249 -QTLLPADELKKRFEQEGISLEKPVVTACG---TGVTACILALGLNRLGKHDVAVYDGSW 304
              L             GIS +  VV   G       A  +       G   V+V +G +
Sbjct: 71  EVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGF 130

Query: 305 TEWGAQPDTPVET 317
             W  +   PV +
Sbjct: 131 RNWLKE-GHPVTS 142

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 147

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score =  116 bits (291), Expect = 1e-32
 Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 22  PVVSVDWLHANLREPDLKVLDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
             V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ 
Sbjct: 3   WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSP 62

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
           LPHMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL 
Sbjct: 63  LPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLA 122

Query: 141 RWRASGYDVESSAS 154
            W+     +E  A 
Sbjct: 123 GWQRDDLLLEEGAV 136

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 147

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 50.3 bits (119), Expect = 2e-08
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 7/128 (5%)

Query: 195 EQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT---- 250
           + +  +I++   Q++DAR  +    D     +   +GH+PG+       + D +      
Sbjct: 8   DWLAEHIDDPEIQIIDARMASPGQED-RNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHM 66

Query: 251 LLPADELKKRFEQEGISLEKPVVTAC-GTGVTACILALGLNRLGKHDVAVYDGSWTEWGA 309
           L   +       + G++ +K ++    G   +A      L   G   V++  G    W  
Sbjct: 67  LPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQR 126

Query: 310 QPDTPVET 317
             D  +E 
Sbjct: 127 D-DLLLEE 133

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score =  106 bits (266), Expect = 4e-29
 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 207 QLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--------SQTLLPADELK 258
            + DARS  RF             GH+ G++ +P+   L          S+  +  + + 
Sbjct: 14  IITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMT 73

Query: 259 KRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS 318
                   +     V +CG+GVTACI    ++ LG     +Y GSW+E+      P+  S
Sbjct: 74  VVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 133

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 19/130 (14%), Positives = 30/130 (23%), Gaps = 10/130 (7%)

Query: 36  PDLKVLDASWYMPDE----QRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF 91
           P   + DA     D      R    +    HI GA             +   +   EE  
Sbjct: 11  PQAIITDARS--ADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIR 68

Query: 92  ---AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGY 147
                 V   G        V+      +A     +    G    ++  G    +      
Sbjct: 69  HNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRP 128

Query: 148 DVESSASGDA 157
            +  S   D 
Sbjct: 129 PIMRSIIDDY 138

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 141

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score =  102 bits (255), Expect = 1e-27
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 6/130 (4%)

Query: 194 LEQVKRNIEEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDAS 248
           + +    ++EG   LVD RS   + G+            +R+GH+PG+K IP+ + ++  
Sbjct: 9   VLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD 68

Query: 249 QTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEW 307
            T   A+EL+  +E  GI+ +K +V  C     +      L   LG   V  YDGSWTEW
Sbjct: 69  GTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEW 128

Query: 308 GAQPDTPVET 317
           G     P+  
Sbjct: 129 GNLVGVPIAK 138

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 141

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 23/122 (18%), Positives = 37/122 (30%), Gaps = 17/122 (13%)

Query: 31  ANLREPDLKVLDA----------SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
             ++E    ++D           +      Q    +     HIPGA          +  N
Sbjct: 14  IKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAG---HIPGAKNIPWA----KAVN 66

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
                 S E   A    LG+     +VVY      S+   + +  + G+  V   DG   
Sbjct: 67  PDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWT 126

Query: 141 RW 142
            W
Sbjct: 127 EW 128

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (249), Expect = 5e-27
 Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 188 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA 247
           P  +  +  V     E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ ++   
Sbjct: 2   PEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTEL-VR 60

Query: 248 SQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW 307
              L   DEL   F   G+S +KP++ +CG+GVTA ++ L L  L   +V +YDG+W+EW
Sbjct: 61  EGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEW 120

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 43.1 bits (100), Expect = 5e-06
 Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 10/126 (7%)

Query: 20  KEPVVSVDWLHANLREPDLKVLDA---SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 76
            E VV V  +     E   +++DA   + +   E   P    +  HIPGAL         
Sbjct: 2   PEAVVKVTDVLLASHENTAQIIDARPAARFN-AEVDEPRPGLRRGHIPGALNVP-----W 55

Query: 77  RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 136
                   L + +   A     G+     ++V  G G+  AA V           V + D
Sbjct: 56  TELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVT-AAVVLLALATLDVPNVKLYD 114

Query: 137 GGLPRW 142
           G    W
Sbjct: 115 GAWSEW 120

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 95.8 bits (237), Expect = 6e-25
 Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 5/139 (3%)

Query: 178 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 237
           GP             + + +   +      + DARS   +     E     + GH+PG+ 
Sbjct: 2   GPVAL--SLHDEPTASRDYLLGRLGAADLAIWDARSPQEY---RGEKVLAAKGGHIPGAV 56

Query: 238 CIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDV 297
              +   +D S+ L    ++  R E+ GI+ +K +VT C T   + +  L    LG   V
Sbjct: 57  NFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRV 116

Query: 298 AVYDGSWTEWGAQPDTPVE 316
             Y GSW EWG  PDTPVE
Sbjct: 117 KGYAGSWGEWGNHPDTPVE 135

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 58.4 bits (140), Expect = 3e-11
 Identities = 32/139 (23%), Positives = 44/139 (31%), Gaps = 10/139 (7%)

Query: 14  TLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA-HIPGALFFDVD 72
            LS+   EP  S D+L   L   DL + DA    P E R          HIPGA+ F+  
Sbjct: 5   ALSLHD-EPTASRDYLLGRLGAADLAIWDARS--PQEYRGEKVLAAKGGHIPGAVNFE-- 59

Query: 73  GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRV 132
                    P          A          D  +V   +    +   + + +  G+ RV
Sbjct: 60  ---WTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRV 116

Query: 133 WVLDGGLPRW-RASGYDVE 150
               G    W       VE
Sbjct: 117 KGYAGSWGEWGNHPDTPVE 135

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 143

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 91.9 bits (227), Expect = 2e-23
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 21  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
           E +VS DW+  +L +P ++VL+               Y   HIPGA   D     D    
Sbjct: 6   EVLVSTDWVQEHLEDPKVRVLEVDE--------DILLYDTGHIPGAQKIDWQR--DFWDP 55

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
           +     SEE FA  +  LG+ N   +V+Y  K  + AA  +W F+  GH  V +++GG  
Sbjct: 56  VVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQ 115

Query: 141 RWRASGYDVESSA 153
           +W   G  + +  
Sbjct: 116 KWVEEGRPLTTEV 128

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 143

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 47.6 bits (112), Expect = 2e-07
 Identities = 25/133 (18%), Positives = 54/133 (40%), Gaps = 14/133 (10%)

Query: 188 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD- 246
           P ++ + + V+ ++E+   ++++            E      +GH+PG++ I + +    
Sbjct: 5   PEVLVSTDWVQEHLEDPKVRVLEVD----------EDILLYDTGHIPGAQKIDWQRDFWD 54

Query: 247 -ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSW 304
              +  +  +E  K  E+ GIS +  VV            A    +  G  DV + +G  
Sbjct: 55  PVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGR 114

Query: 305 TEWGAQPDTPVET 317
            +W  +   P+ T
Sbjct: 115 QKWVEE-GRPLTT 126

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 3e-16
 Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 27/144 (18%)

Query: 17  VSPKEPVVSVDWLHANLREPDLKV--LDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV 74
            S      +V WL+  L   + ++  +D           P + Y+ +HI  A+   + G+
Sbjct: 11  ASEMAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGI 61

Query: 75  ADR-----TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG------IFSAARVWWM 123
             R        +  +    E              D +V+YD             + +  +
Sbjct: 62  MLRRLQKGNLPVRALFTRGEDRD---RFTRRCGTDTVVLYDESSSDWNENTGGESLLGLL 118

Query: 124 FRVFGHD--RVWVLDGGLPRWRAS 145
            +    +  R + L+GG  +++A 
Sbjct: 119 LKKLKDEGCRAFYLEGGFSKFQAE 142

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.003
 Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 32/137 (23%)

Query: 193 TLEQVKRNIEEGT--YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 250
           T+  +   +E G     L+D R +  ++           S H+  +  +  P ++     
Sbjct: 19  TVAWLNEQLELGNERLLLMDCRPQELYE-----------SSHIESAINVAIPGIMLRRLQ 67

Query: 251 --------LLPADELKKRFEQEGISLEKPVVTACGTG-------VTACILALGLNRLGK- 294
                   L    E + RF          VV    +            +L L L +L   
Sbjct: 68  KGNLPVRALFTRGEDRDRF--TRRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDE 125

Query: 295 -HDVAVYDGSWTEWGAQ 310
                  +G ++++ A+
Sbjct: 126 GCRAFYLEGGFSKFQAE 142

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 64.3 bits (155), Expect = 2e-13
 Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 14/144 (9%)

Query: 10  ADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFF 69
            D+++L +     V+    L A L  P+L ++D +             Y   HIPGA F 
Sbjct: 2   DDFASLPL-----VIEPADLQARLSAPELILVDLTSA---------ARYAEGHIPGARFV 47

Query: 70  DVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGH 129
           D           P + P  E   +    LG   +   VVYD +G   A R  W+  V G 
Sbjct: 48  DPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107

Query: 130 DRVWVLDGGLPRWRASGYDVESSA 153
            R   L+GGL  W A    +    
Sbjct: 108 QRYHYLNGGLTAWLAEDRPLSREL 131

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 42.4 bits (98), Expect = 9e-06
 Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 18/135 (13%)

Query: 188 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA 247
           P +I     ++  +      LVD  S AR+             GH+PG++ +   +    
Sbjct: 8   PLVI-EPADLQARLSAPELILVDLTSAARY-----------AEGHIPGARFVDPKRTQLG 55

Query: 248 SQTLLPADELKKRFEQEG-----ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDG 302
                     +++ E              VV     G  A      L+ +G+      +G
Sbjct: 56  QPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNG 115

Query: 303 SWTEWGAQPDTPVET 317
             T W A+ D P+  
Sbjct: 116 GLTAWLAE-DRPLSR 129

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 7e-10
 Identities = 15/136 (11%), Positives = 41/136 (30%), Gaps = 25/136 (18%)

Query: 24  VSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 81
           ++   L+  + + ++ ++  DA      +          + I  +L    + ++   T  
Sbjct: 3   ITAKELYTMMTDKNISLIIMDARRMQDYQD---------SCILHSLSVPEEAISPGVT-- 51

Query: 82  PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF------------GH 129
              + +     +  +     N + +V+ D        ++    R                
Sbjct: 52  ASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLR 111

Query: 130 DRVWVLDGGLPRWRAS 145
           +   VL+GG   W   
Sbjct: 112 NEPLVLEGGYENWLLC 127

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Length = 108

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

 Score = 50.5 bits (120), Expect = 9e-09
 Identities = 21/127 (16%), Positives = 36/127 (28%), Gaps = 26/127 (20%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
            +    + ++E    LVD R    F             GH   +  +    +    +   
Sbjct: 8   NVADAHQKLQEKEAVLVDIRDPQSF-----------AMGHAVQAFHLTNDTLGAFMRDND 56

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 312
                           + PV+  C  G ++   A  L + G   V   DG +  W  Q  
Sbjct: 57  F---------------DTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFP 101

Query: 313 TPVETSS 319
             V   +
Sbjct: 102 AEVAYGA 108

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Length = 108

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

 Score = 49.3 bits (117), Expect = 2e-08
 Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 30/127 (23%)

Query: 24  VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPH 83
           ++V   H  L+E +  ++D         R+P Q + + H   A     D +     +   
Sbjct: 7   INVADAHQKLQEKEAVLVDI--------RDP-QSFAMGHAVQAFHLTNDTLGAFMRDNDF 57

Query: 84  MLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR 143
             P                     V    G  S           G+D V+ +DGG   W+
Sbjct: 58  DTPVM-------------------VMCYHGNSSK-GAAQYLLQQGYDVVYSIDGGFEAWQ 97

Query: 144 ASGYDVE 150
              +  E
Sbjct: 98  R-QFPAE 103

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.7 bits (115), Expect = 4e-08
 Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 18/130 (13%)

Query: 22  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 81
             VSV   H  L     + LD         R P +E+   H  GA+            + 
Sbjct: 8   SSVSVTVAHD-LLLAGHRYLDV--------RTP-EEFSQGHACGAINVPYMNRGASGMSK 57

Query: 82  PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 141
                 +              +   ++   +    + +        G   V  + GG   
Sbjct: 58  NTDFLEQ--------VSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSA 109

Query: 142 WRASGYDVES 151
           W  +G   ++
Sbjct: 110 WAKNGLPTKA 119

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.8 bits (97), Expect = 1e-05
 Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 16/124 (12%)

Query: 193 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 252
           ++      +  G ++ +D R+   F             GH  G+  +P+     +  +  
Sbjct: 11  SVTVAHDLLLAG-HRYLDVRTPEEFS-----------QGHACGAINVPYMNRGASGMSKN 58

Query: 253 PADELKKRFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD 312
                              ++  C +G  +      L   G   V    G ++ W     
Sbjct: 59  TDF---LEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKN-G 114

Query: 313 TPVE 316
            P +
Sbjct: 115 LPTK 118

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 157

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.6 bits (112), Expect = 2e-07
 Identities = 32/189 (16%), Positives = 53/189 (28%), Gaps = 37/189 (19%)

Query: 19  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 78
           P+   +    L   L EP  +VLD +                  +   L   ++ +    
Sbjct: 2   PRADTIDPTTLADWLGEPGTRVLDFTA--SANYAKRHIPGAAWVLRSQLKQALERLGTAE 59

Query: 79  TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 138
                                        V        A       +      V++LDGG
Sbjct: 60  R---------------------------YVLTCGSSLLARFAVAEVQALSGKPVFLLDGG 92

Query: 139 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 198
              W A+G   E   S    L AS   +   + Y+    G    +   Q +L W    V+
Sbjct: 93  TSAWVAAGLPTEDGES----LLASPRIDRYRRPYE----GTDNPREAMQGYLDWEFGLVE 144

Query: 199 RNIEEGTYQ 207
           +   +GT+ 
Sbjct: 145 QLGRDGTHG 153

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 132

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 46.3 bits (108), Expect = 4e-07
 Identities = 17/139 (12%), Positives = 36/139 (25%), Gaps = 16/139 (11%)

Query: 15  LSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV 74
           ++++     ++   L    R P++ ++D      +   +       A             
Sbjct: 1   MAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQ 60

Query: 75  ADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWV 134
             +  +      +         A  L N                 +       G   + +
Sbjct: 61  NVKDKDTLVFHSALSQVRGPTCARRLVN----------------YLDEKKEDTGIKNIMI 104

Query: 135 LDGGLPRWRASGYDVESSA 153
           L+ G   W ASG  V   A
Sbjct: 105 LERGFNGWEASGKPVCRCA 123

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 45.4 bits (106), Expect = 5e-07
 Identities = 22/125 (17%), Positives = 34/125 (27%), Gaps = 28/125 (22%)

Query: 23  VVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 81
           V +   + A L    +L +LD               +  AH   A    +  +       
Sbjct: 3   VRTFHDIRAALLARRELALLDVREE---------DPFAQAHPLFAANLPLSRLELEIHAR 53

Query: 82  PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 141
                                +D  +     G   A          G+  V +LDGGL  
Sbjct: 54  VPR------------------RDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSG 95

Query: 142 WRASG 146
           WR +G
Sbjct: 96  WRNAG 100

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 27/134 (20%)

Query: 22  PVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 80
           P ++ + + A L    +  +LDA        R    EYQ   IPG +      +  R   
Sbjct: 24  PSLAAEEVQALLDARAEAVILDA--------RRF-DEYQTMSIPGGISVPGAELVLRVAE 74

Query: 81  LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 140
           L     +                  ++V       S      +      + V  L  G  
Sbjct: 75  LAPDPRTR-----------------VIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTI 117

Query: 141 RWRASGYDVESSAS 154
            W  +G  +E   +
Sbjct: 118 GWTLAGQQLEHGQT 131

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.004
 Identities = 24/154 (15%), Positives = 42/154 (27%), Gaps = 38/154 (24%)

Query: 7   GRRADYSTLSVSPKEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIP 64
           G+  D   +S     P +    L+        +  ++D         R P  EY+  HI 
Sbjct: 17  GKHQDLKYIS-----PEIMASVLNGKFANLIKEFVIIDC--------RYP-YEYEGGHIK 62

Query: 65  GALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMF 124
           GA+            NL      E+             +  +V +         R+    
Sbjct: 63  GAV------------NLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYV 110

Query: 125 RV----------FGHDRVWVLDGGLPRWRASGYD 148
           R             +  ++VL GG   +      
Sbjct: 111 RERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	319
d1e0ca2	136	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.97
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.97
d1urha1	147	3-mercaptopyruvate sulfurtransferase {Escherichia	99.97
d1rhsa1	149	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.96
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.96
d1uara1	143	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.95
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	99.94
d1okga1	156	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.94
d1urha1	147	3-mercaptopyruvate sulfurtransferase {Escherichia	99.93
d1uara1	143	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.93
d1okga2	139	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.92
d1e0ca1	135	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.92
d1e0ca2	136	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.91
d1rhsa1	149	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.9
d1e0ca1	135	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.88
d1okga1	156	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.88
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.87
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.86
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	99.86
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.86
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	99.86
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.84
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	99.84
d1yt8a2	101	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.84
d1yt8a3	157	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.83
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	99.83
d1yt8a3	157	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.83
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	99.83
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	99.82
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	99.82
d1yt8a2	101	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.82
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	99.81
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.79
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	99.77
d1okga2	139	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.76
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.76
d1c25a_	161	CDC25a {Human (Homo sapiens) [TaxId: 9606]}	99.66
d2gwfa1	135	Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum	99.65
d1ymka1	174	CDC25b {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1hzma_	154	Erk2 binding domain of Mapk phosphatase mkp-3 {Hum	99.6
d1c25a_	161	CDC25a {Human (Homo sapiens) [TaxId: 9606]}	99.58
d1hzma_	154	Erk2 binding domain of Mapk phosphatase mkp-3 {Hum	99.52
d2gwfa1	135	Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum	99.51
d1ymka1	174	CDC25b {Human (Homo sapiens) [TaxId: 9606]}	99.48
d1xria_	151	Putative phosphatase At1g05000 {Thale cress (Arabi	89.1
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	87.25
d1xria_	151	Putative phosphatase At1g05000 {Thale cress (Arabi	82.34

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.97  E-value=1.1e-31  Score=215.20  Aligned_cols=128  Identities=30%  Similarity=0.519  Sum_probs=117.1

Q ss_pred             cCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcC
Q 020963          186 FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  265 (319)
Q Consensus       186 ~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~  265 (319)
                      +++...+|.++|.+++++++++|||+|++.||.|.....   .+.||||||+|+|+.++.++.+.|+++++|++.+.+.|
T Consensus         8 ~~~~~~~s~d~l~~~l~~~~~~liD~R~~~ey~G~~~~~---~~~GhIPGAinip~~~~~~~~~~~~~~~~l~~~~~~~g   84 (136)
T d1e0ca2           8 LHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLA---AKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELG   84 (136)
T ss_dssp             CCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCS---SSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTT
T ss_pred             cCCCceEcHHHHHHhhCCCCeEEEECcChHHhccccccc---ccCCcchhHhhhhhhhhhccccccchhHHHhhhhhhcc
Confidence            456679999999999999999999999999999864433   26899999999999999888888999999999999999


Q ss_pred             CCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCc
Q 020963          266 ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVE  316 (319)
Q Consensus       266 ~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~  316 (319)
                      ++++++||+||++|.||+.++++|+.+||+||++|+|||.+|..+.++|+|
T Consensus        85 i~~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~ydGg~~eW~~~~~~PvE  135 (136)
T d1e0ca2          85 ITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE  135 (136)
T ss_dssp             CCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred             cCCCCceEEeCCChHHHHHHHHHHHHcCCCCcEEecCCHHHHhcCCCCCCc
Confidence            999999999999999999999999999999999999999999876569997

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=1.9e-31  Score=215.67  Aligned_cols=138  Identities=41%  Similarity=0.710  Sum_probs=124.9

Q ss_pred             ccccccCCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCC-CCCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 020963          181 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR-KGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  259 (319)
Q Consensus       181 ~~~~~~~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~-~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~  259 (319)
                      .|.+..++.++++.++|.+++++++++|||+|++++|.|....+. ...+.||||||+|+|+..+.+..+.|++++++++
T Consensus         2 ~f~~~~~~~~i~~~~ev~~~l~~~~~~iiD~R~~~ef~G~~~~~~~~~~~~GhIpgA~~ip~~~~~~~~~~~~~~~~l~~   81 (144)
T d1rhsa2           2 IFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRA   81 (144)
T ss_dssp             CCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHH
T ss_pred             eeecccChHHeecHHHHHHHhcCCCcEEEECCCCHHHcCCCCCCccccceeeehhhhhhcchhhhhhhhcccCCHHHHHH
Confidence            466778889999999999999999999999999999999765542 2347899999999999999998899999999999


Q ss_pred             HHHHcCCCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC--CCCCccC
Q 020963          260 RFEQEGISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP--DTPVETS  318 (319)
Q Consensus       260 ~l~~~~~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~--~~p~~~~  318 (319)
                      ++...+++++++||+||++|.||+.++++|+.+||++|++|+|||.+|....  ..||++|
T Consensus        82 ~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~lG~~~v~~YdGsw~eW~~~~~p~~pV~~G  142 (144)
T d1rhsa2          82 MFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQG  142 (144)
T ss_dssp             HHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBTT
T ss_pred             HHHHcCCCCCCCEEEEecccchHHHHHHHHHHcCCCCCEEeCCCHHHHhhcCCCCCCcCCC
Confidence            9999999999999999999999999999999999999999999999998753  3678776

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.4e-30  Score=210.15  Aligned_cols=135  Identities=42%  Similarity=0.851  Sum_probs=121.2

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCC-CCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDE-QRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~-~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      +..+||++||.++|++++++|||||+..++. .++..++|..||||||+|+++..+.......++++|+.++|+++++++
T Consensus         1 ~~~lVs~~wL~~~L~~~~v~iiD~r~~~~~~~~~~~~~~y~~gHIPGAi~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~   80 (147)
T d1urha1           1 TTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMREL   80 (147)
T ss_dssp             CCCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHT
T ss_pred             CCccCcHHHHHHHhCCCCeEEEEeeCCCCCccCccHHHHHHhCCccccEEeehhhhccccccccccCCCHHHHHHHHHHh
Confidence            3579999999999999999999999765443 234567899999999999999888777777888999999999999999


Q ss_pred             CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCC
Q 020963           99 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      ||+++++||+||+.++..|+|++|+|+.+||++|++|+||+.+|+++|+|++++.+
T Consensus        81 Gi~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~~~W~~~g~pv~~~~~  136 (147)
T d1urha1          81 GVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV  136 (147)
T ss_dssp             TCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred             CcCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChHHHHHHcCCCccCCCC
Confidence            99999999999987777799999999999999999999999999999999999864

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=1e-28  Score=200.86  Aligned_cols=137  Identities=48%  Similarity=0.886  Sum_probs=121.5

Q ss_pred             CCCCCCcccHHHHHHhcCC----CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHH
Q 020963           17 VSPKEPVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFA   92 (319)
Q Consensus        17 ~~~~~~~Is~~~l~~~l~~----~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~   92 (319)
                      ..+..++||++||.++|++    ++++|||||++.++. |++.++|..||||||+|+++..+..........+++.++|+
T Consensus         3 ~~~~~~lVs~~wL~~~L~~~~~~~~~~IiD~r~~~~~~-~~~~~~y~~gHIPGAv~~~~~~~~~~~~~~~~~~~~~~~~~   81 (149)
T d1rhsa1           3 QVLYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGT-REARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFA   81 (149)
T ss_dssp             SSCCCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTS-CCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHH
T ss_pred             cccCCCccCHHHHHHHHhccCCCCCEEEEEecCcCCCC-cchHHHHHHhcccCceeccHHhhcccccchhhhhhhhHHHH
Confidence            3567789999999999963    479999999887764 55778999999999999999988777777788899999999


Q ss_pred             HHHHhCCCCCCCeEEEEcCC--CcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCC
Q 020963           93 AAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus        93 ~~~~~~~i~~~~~vvly~~~--g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      +.++.+||.++++||+||+.  ++..++|++|+|+.+||++|++|+||+.+|+++|+|+++.++
T Consensus        82 ~~l~~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~~V~vLdGG~~~W~~~G~pv~~~~~  145 (149)
T d1rhsa1          82 DYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPS  145 (149)
T ss_dssp             HHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             HHHhhhhccCCceeEEeeccCCcchhhhHHHHHHHHcCCCceEEeCCcHHHHHHCcCcccCCCC
Confidence            99999999999999999864  455689999999999999999999999999999999998764

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=3.1e-29  Score=201.79  Aligned_cols=129  Identities=33%  Similarity=0.572  Sum_probs=110.5

Q ss_pred             ccCHHHHHHHh---hcCCcEEEeccCCCcccCCCCCC-----CCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH
Q 020963          191 IWTLEQVKRNI---EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  262 (319)
Q Consensus       191 ~is~~~l~~~~---~~~~~~liDvR~~~e~~g~~~~~-----~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~  262 (319)
                      .+..+++.+.+   ++++++|||+|++++|.|.....     ....+.||||||+|+|+.++++.++.+++++++++++.
T Consensus         3 ra~~~~v~~~~~~~~~~~~~lvD~R~~~ey~G~~~~~~~~~~~~~~r~GhIpgA~nlp~~~~~~~~~~~~~~~~~~~~~~   82 (141)
T d1uara2           3 RAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYE   82 (141)
T ss_dssp             EECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHG
T ss_pred             cccHHHHHHHHHHhhCCCcEEEeCCCHHHcCCccCcccccCcccceeeeEeCCccccccccccccccccccHHHHHHHHH
Confidence            34456665544   45789999999999999975532     23346899999999999999998889999999999999


Q ss_pred             HcCCCCCCCEEEecCCcHHHHHHHHHHHh-cCCCCceeeeCcHHHHhCCCCCCCccCC
Q 020963          263 QEGISLEKPVVTACGTGVTACILALGLNR-LGKHDVAVYDGSWTEWGAQPDTPVETSS  319 (319)
Q Consensus       263 ~~~~~~~~~vivyC~~G~ra~~~~~~L~~-~G~~~v~~~~Gg~~~W~~~~~~p~~~~~  319 (319)
                      ..|++++++||+||++|.+|+.++++|.. +||+||++|+|||.+|....++|+++|.
T Consensus        83 ~~gi~~d~~vV~yC~~G~~As~~~~~l~~~~G~~~v~~ydGs~~eW~~~~~~Pv~~g~  140 (141)
T d1uara2          83 PLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE  140 (141)
T ss_dssp             GGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred             HhCCCCCCeEEEEecCcchHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            99999999999999999999999999985 8999999999999999775569999974

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=2.7e-28  Score=196.96  Aligned_cols=126  Identities=30%  Similarity=0.568  Sum_probs=111.4

Q ss_pred             CCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHh
Q 020963           18 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA   97 (319)
Q Consensus        18 ~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~   97 (319)
                      ++...+||++||.+++++++++|||||        .+..+|..||||||+|+|+....  .....+++++.+.|++.+++
T Consensus         3 ~~p~~lVs~~~l~~~l~~~~v~iiDvr--------~~~~~y~~gHIPgAi~~~~~~~~--~~~~~~~l~~~~~l~~~~~~   72 (143)
T d1uara1           3 AHPEVLVSTDWVQEHLEDPKVRVLEVD--------EDILLYDTGHIPGAQKIDWQRDF--WDPVVRDFISEEEFAKLMER   72 (143)
T ss_dssp             SCGGGEECHHHHHTTTTCTTEEEEEEC--------SSTTHHHHCBCTTCEEECHHHHH--BCSSSSSBCCHHHHHHHHHH
T ss_pred             CCCCccCcHHHHHHHhCCCCeEEEECC--------CCHHHHhcCCCCCcccccccccc--cccccccchhhHHHHHHhhh
Confidence            455679999999999998899999998        23568999999999999986432  22345678899999999999


Q ss_pred             CCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963           98 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        98 ~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      +||+++++||+||+.+...|++++|+|+.+||++|++|+||+.+|+.+|+|+++..
T Consensus        73 ~Gi~~~~~iVvy~~~~~~~a~~~~~~l~~~G~~~V~vldGG~~~W~~~g~p~~~~~  128 (143)
T d1uara1          73 LGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEV  128 (143)
T ss_dssp             TTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCC
T ss_pred             hccCCCceEEEecCCCcccchhHHHHHHHhCCceEEEEcCcHHHHHHCCCCccCCC
Confidence            99999999999998777779999999999999999999999999999999999976

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=9e-28  Score=188.18  Aligned_cols=120  Identities=38%  Similarity=0.789  Sum_probs=106.8

Q ss_pred             CCccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 020963          187 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  266 (319)
Q Consensus       187 ~~~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~  266 (319)
                      ||+.+++.+|+..+.+.++++|||+|++++|.|....+....+.||||||+|+|+..+.. .+.+++.+++++.+...++
T Consensus         1 np~~~~~~~ev~~~~~~~~~~liD~R~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~   79 (120)
T d1urha2           1 NPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDAIFFGRGV   79 (120)
T ss_dssp             CGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-SSSBCCHHHHHHHHHTTTC
T ss_pred             ChhHHccHHHHHHHhhCCCcEEEeCCCHHHcCcccCCcccccccccccccchhchhhccc-ccccCCHHHhhhhhhhccc
Confidence            456789999999999999999999999999999877766666899999999999987655 4578999999999999999


Q ss_pred             CCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHH
Q 020963          267 SLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEW  307 (319)
Q Consensus       267 ~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W  307 (319)
                      +++++||+||++|.||+.++++|+.+||+||++|+|||.+|
T Consensus        80 ~~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y~Gs~~eW  120 (120)
T d1urha2          80 SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEW  120 (120)
T ss_dssp             CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-
T ss_pred             CccCceEEEccchhHHHHHHHHHHHcCCCCceEcCCChhhC
Confidence            99999999999999999999999999999999999999999

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.94  E-value=2.1e-26  Score=187.40  Aligned_cols=130  Identities=24%  Similarity=0.474  Sum_probs=111.2

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccc-ccc--CCCCCCCCCCHHHHHHHHHh
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV-ADR--TTNLPHMLPSEEAFAAAVSA   97 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l-~~~--~~~~~~~~~~~~~~~~~~~~   97 (319)
                      ..+||++||.+++++  ++|||||++..+... ...+|..||||||+++++... ...  ....++++|+.++|++.+++
T Consensus         7 ~~lvs~~~L~~~l~d--~~iiD~r~~l~~~~~-g~~~Y~~gHIPGA~~~d~~~~l~~~~~~~~~~~~lP~~~~~~~~l~~   83 (156)
T d1okga1           7 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDH-GSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPCAEFIDWCMA   83 (156)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSSTTT-TTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEeCHHHHHHhcCC--CEEEEeeccCCCCcc-hHHHHHHcCCCCCeEcCHHHhcccccCCCCCccccCCHHHHHHHHHh
Confidence            569999999999974  999999987766554 467899999999999998653 222  33466789999999999999


Q ss_pred             CCCCCCCeEEEEcCC-CcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCC
Q 020963           98 LGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus        98 ~~i~~~~~vvly~~~-g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      +||+++++||+||+. +...|+|++|+|+.+|+ +|++|+||+.+|+++|+|++++.+
T Consensus        84 lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~-~v~iLdGG~~aW~~~G~pv~t~~p  140 (156)
T d1okga1          84 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEP  140 (156)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCC
T ss_pred             ccccCCceEEEEeCCCCchHHHHHHHHHHHcCC-eeEEeCCCHHHHHHCCCCCCCCCC
Confidence            999999999999854 45569999999999997 799999999999999999998753

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.9e-26  Score=186.90  Aligned_cols=127  Identities=17%  Similarity=0.257  Sum_probs=104.9

Q ss_pred             cccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCCHHHHHHHHHHcC
Q 020963          190 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQEG  265 (319)
Q Consensus       190 ~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~~~l~~~l~~~~  265 (319)
                      .+||++||.+++++++++|||+|......... .....++.||||||+|+++..+.+..    +.+++.+++++.++++|
T Consensus         3 ~lVs~~wL~~~L~~~~v~iiD~r~~~~~~~~~-~~~~~y~~gHIPGAi~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~G   81 (147)
T d1urha1           3 WFVGADWLAEHIDDPEIQIIDARMASPGQEDR-NVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   81 (147)
T ss_dssp             CEECHHHHHTTTTCTTEEEEECCCCCSSCTTC-CHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             ccCcHHHHHHHhCCCCeEEEEeeCCCCCccCc-cHHHHHHhCCccccEEeehhhhccccccccccCCCHHHHHHHHHHhC
Confidence            58999999999999999999999432111000 00001157999999999998876654    35779999999999999


Q ss_pred             CCCCCCEEEecCC-cHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          266 ISLEKPVVTACGT-GVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       266 ~~~~~~vivyC~~-G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      |+++++||+||.. +..|+++++.|+.+|++||++|+|||.+|..++ +|++++
T Consensus        82 i~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~~~W~~~g-~pv~~~  134 (147)
T d1urha1          82 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDD-LLLEEG  134 (147)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTT-CCCBBS
T ss_pred             cCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChHHHHHHcC-CCccCC
Confidence            9999999999974 678999999999999999999999999999995 999986

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=1.4e-26  Score=186.77  Aligned_cols=120  Identities=20%  Similarity=0.366  Sum_probs=106.2

Q ss_pred             CCccccCHHHHHHHhhcCCcEEEeccC-CCcccCCCCCCCCCCCccccCCCcccCcccccCC--CCCCCCHHHHHHHHHH
Q 020963          187 QPHLIWTLEQVKRNIEEGTYQLVDARS-KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--SQTLLPADELKKRFEQ  263 (319)
Q Consensus       187 ~~~~~is~~~l~~~~~~~~~~liDvR~-~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~--~~~~~~~~~l~~~l~~  263 (319)
                      +|+.+||++||.+++++++++|||||+ .++|           ..||||||+|+|+......  .+.+.+.++|++++.+
T Consensus         4 ~p~~lVs~~~l~~~l~~~~v~iiDvr~~~~~y-----------~~gHIPgAi~~~~~~~~~~~~~~~l~~~~~l~~~~~~   72 (143)
T d1uara1           4 HPEVLVSTDWVQEHLEDPKVRVLEVDEDILLY-----------DTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMER   72 (143)
T ss_dssp             CGGGEECHHHHHTTTTCTTEEEEEECSSTTHH-----------HHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHH
T ss_pred             CCCccCcHHHHHHHhCCCCeEEEECCCCHHHH-----------hcCCCCCcccccccccccccccccchhhHHHHHHhhh
Confidence            456799999999999988999999995 6778           6899999999998764432  2467899999999999


Q ss_pred             cCCCCCCCEEEecCCcH-HHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          264 EGISLEKPVVTACGTGV-TACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       264 ~~~~~~~~vivyC~~G~-ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +|++++++||+||.+|. +|+++++.|+.+|+++|++|+|||.+|..++ +|++++
T Consensus        73 ~Gi~~~~~iVvy~~~~~~~a~~~~~~l~~~G~~~V~vldGG~~~W~~~g-~p~~~~  127 (143)
T d1uara1          73 LGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEG-RPLTTE  127 (143)
T ss_dssp             TTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHT-CCCBCC
T ss_pred             hccCCCceEEEecCCCcccchhHHHHHHHhCCceEEEEcCcHHHHHHCC-CCccCC
Confidence            99999999999998764 6889999999999999999999999999995 999985

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.92  E-value=5.8e-27  Score=188.16  Aligned_cols=116  Identities=27%  Similarity=0.447  Sum_probs=98.7

Q ss_pred             cCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCC---CCCCCHHHHHHHHHHc-----CCCCCCCEEE
Q 020963          203 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---QTLLPADELKKRFEQE-----GISLEKPVVT  274 (319)
Q Consensus       203 ~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~---~~~~~~~~l~~~l~~~-----~~~~~~~viv  274 (319)
                      .++++|||+|++++|.|....+....+.||||||+|+|+..++...   ..+++++++.+.+...     +++++++||+
T Consensus        10 ~p~~vlvD~R~~~ef~G~~~~~~~~~~~GHIpgAvnip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vV~   89 (139)
T d1okga2          10 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF   89 (139)
T ss_dssp             CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred             CCCeEEEeCCCHHHhCCcCCCcccCCcCceeCCCeeccchhhccccccccccCCHHHhhhhhhhhhhhccCCCCCCeEEE
Confidence            3679999999999999987665555589999999999998876443   3578999999988753     6788899999


Q ss_pred             ecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          275 ACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       275 yC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ||++|.||+.++++|+.+||++|++|+|||.+|....++||+++
T Consensus        90 yC~sG~~Aa~~~~~L~~~G~~~v~vydGsw~eW~~~~~~Pv~~~  133 (139)
T d1okga2          90 SCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS  133 (139)
T ss_dssp             ECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred             ECCCcHHHHHHHHHHHHhCCCCccCCCCCHHHHhCCCCCCeeec
Confidence            99999999999999999999999999999999977545899864

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.92  E-value=5.8e-25  Score=175.21  Aligned_cols=126  Identities=29%  Similarity=0.465  Sum_probs=112.5

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      .+.+||++||.+++++++++|||||         ..++|..||||||+|+|+..+..............+.+...+...+
T Consensus         7 ~p~lIs~~el~~~l~~~~~viiDvR---------~~~ey~~gHIpgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (135)
T d1e0ca1           7 LPLVIEPADLQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELG   77 (135)
T ss_dssp             SCSEECHHHHHTTTTCTTEEEEECS---------CHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHT
T ss_pred             CCcEeeHHHHHHHhcCCCeEEEECC---------CHHHHhcccCccccccchhhhhhcccccchhhcchhhhhhhhcccc
Confidence            3568999999999998899999999         7899999999999999998876655555566777888888888889


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      +.....+|+||+.++..++++++.|+.+||+||++|+||+.+|+++|+|++++.+
T Consensus        78 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~G~~~V~~l~GG~~~W~~~g~p~~~~~p  132 (135)
T d1e0ca1          78 HRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP  132 (135)
T ss_dssp             CCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred             ccccccccccccccCccchhhHHHHHhccCCCEEEecChHHHHHHCCCCCCCCCC
Confidence            9999999999888877899999999999999999999999999999999998753

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.91  E-value=8.4e-25  Score=174.74  Aligned_cols=119  Identities=27%  Similarity=0.391  Sum_probs=103.3

Q ss_pred             CCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhh--------hcCCcCceecCcccccccCCCCCCCCCCHH
Q 020963           18 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ--------VAHIPGALFFDVDGVADRTTNLPHMLPSEE   89 (319)
Q Consensus        18 ~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~--------~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~   89 (319)
                      .+..+++|.++|.+++++++++|||+|         +..+|.        .||||||+|+|+..+.+.+    ..+++.+
T Consensus         8 ~~~~~~~s~d~l~~~l~~~~~~liD~R---------~~~ey~G~~~~~~~~GhIPGAinip~~~~~~~~----~~~~~~~   74 (136)
T d1e0ca2           8 LHDEPTASRDYLLGRLGAADLAIWDAR---------SPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPS----RALRIRT   74 (136)
T ss_dssp             CCSTTBCCHHHHHHHTTCTTEEEEECS---------CHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGG----GTTEECT
T ss_pred             cCCCceEcHHHHHHhhCCCCeEEEECc---------ChHHhcccccccccCCcchhHhhhhhhhhhccc----cccchhH
Confidence            456789999999999999899999999         678885        7999999999998765432    2445567


Q ss_pred             HHHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh-CCCCcc
Q 020963           90 AFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVE  150 (319)
Q Consensus        90 ~~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~-~g~p~~  150 (319)
                      ++++.+..+|++++++||+||+.|. +|++++++|+.+||+||++|+|||.+|.+ .++|++
T Consensus        75 ~l~~~~~~~gi~~~~~vV~yC~~G~-~a~~~~~~l~~~G~~~v~~ydGg~~eW~~~~~~PvE  135 (136)
T d1e0ca2          75 DIAGRLEELGITPDKEIVTHCQTHH-RSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE  135 (136)
T ss_dssp             THHHHHHHTTCCTTSEEEEECSSSS-HHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred             HHhhhhhhcccCCCCceEEeCCChH-HHHHHHHHHHHcCCCCcEEecCCHHHHhcCCCCCCc
Confidence            8999999999999999999998776 58999999999999999999999999966 478875

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=3.6e-24  Score=173.64  Aligned_cols=117  Identities=19%  Similarity=0.291  Sum_probs=102.6

Q ss_pred             cccCHHHHHHHhhc----CCcEEEeccC--------CCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCC
Q 020963          190 LIWTLEQVKRNIEE----GTYQLVDARS--------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLP  253 (319)
Q Consensus       190 ~~is~~~l~~~~~~----~~~~liDvR~--------~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~  253 (319)
                      .+||++||.+++++    ++++|||+|.        .++|           ..||||||+|++++.+....    +.+.+
T Consensus         8 ~lVs~~wL~~~L~~~~~~~~~~IiD~r~~~~~~~~~~~~y-----------~~gHIPGAv~~~~~~~~~~~~~~~~~~~~   76 (149)
T d1rhsa1           8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEY-----------LERHVPGASFFDIEECRDKASPYEVMLPS   76 (149)
T ss_dssp             SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHH-----------HHSBCTTCEECCTTTSSCTTSSSSSCCCC
T ss_pred             CccCHHHHHHHHhccCCCCCEEEEEecCcCCCCcchHHHH-----------HHhcccCceeccHHhhcccccchhhhhhh
Confidence            48999999999973    4799999993        2356           68999999999998876543    45678


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEecCC---cHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          254 ADELKKRFEQEGISLEKPVVTACGT---GVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       254 ~~~l~~~l~~~~~~~~~~vivyC~~---G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      .+.+.+.|+..|++++++||+||..   +..|+++||.|+.+|++||++|+||+.+|..+| +|++++
T Consensus        77 ~~~~~~~l~~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~~V~vLdGG~~~W~~~G-~pv~~~  143 (149)
T d1rhsa1          77 EAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEG-HPVTSE  143 (149)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTT-CCCBCS
T ss_pred             hHHHHHHHhhhhccCCceeEEeeccCCcchhhhHHHHHHHHcCCCceEEeCCcHHHHHHCc-CcccCC
Confidence            9999999999999999999999974   568999999999999999999999999999995 999875

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.88  E-value=8.2e-23  Score=162.57  Aligned_cols=118  Identities=22%  Similarity=0.311  Sum_probs=102.1

Q ss_pred             ccccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCC----CCCCCHHHHHHHHHHc
Q 020963          189 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQE  264 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~----~~~~~~~~l~~~l~~~  264 (319)
                      ..+|+++||.+++++++++|||||+.++|           ..||||||+|+|+..+....    ..+...+.+...+...
T Consensus         8 p~lIs~~el~~~l~~~~~viiDvR~~~ey-----------~~gHIpgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (135)
T d1e0ca1           8 PLVIEPADLQARLSAPELILVDLTSAARY-----------AEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGEL   76 (135)
T ss_dssp             CSEECHHHHHTTTTCTTEEEEECSCHHHH-----------HHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHH
T ss_pred             CcEeeHHHHHHHhcCCCeEEEECCCHHHH-----------hcccCccccccchhhhhhcccccchhhcchhhhhhhhccc
Confidence            35799999999999889999999999999           68999999999998876543    2345667777777777


Q ss_pred             CCCCCCCEEEecC-CcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          265 GISLEKPVVTACG-TGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       265 ~~~~~~~vivyC~-~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +...+..+++||. .+.+++.+++.|+.+||+||++|+||+.+|..+| +|++++
T Consensus        77 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~G~~~V~~l~GG~~~W~~~g-~p~~~~  130 (135)
T d1e0ca1          77 GHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAED-RPLSRE  130 (135)
T ss_dssp             TCCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTT-CCCBCC
T ss_pred             cccccccccccccccCccchhhHHHHHhccCCCEEEecChHHHHHHCC-CCCCCC
Confidence            8888888888875 6788999999999999999999999999999995 999985

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.88  E-value=7e-23  Score=166.36  Aligned_cols=115  Identities=24%  Similarity=0.356  Sum_probs=98.4

Q ss_pred             ccccCHHHHHHHhhcCCcEEEeccC--------CCcccCCCCCCCCCCCccccCCCcccCcccccCCC-------CCCCC
Q 020963          189 HLIWTLEQVKRNIEEGTYQLVDARS--------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS-------QTLLP  253 (319)
Q Consensus       189 ~~~is~~~l~~~~~~~~~~liDvR~--------~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~-------~~~~~  253 (319)
                      ..+||++||.+++++  ++|||+|.        .++|           ..||||||++++++......       +.|.+
T Consensus         7 ~~lvs~~~L~~~l~d--~~iiD~r~~l~~~~~g~~~Y-----------~~gHIPGA~~~d~~~~l~~~~~~~~~~~~lP~   73 (156)
T d1okga1           7 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQY-----------AKEHVKSAIRADVDTNLSKLVPTSTARHPLPP   73 (156)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHH-----------HHCEETTCEECCTTTTSCCCCTTCCCSSCCCC
T ss_pred             CcEeCHHHHHHhcCC--CEEEEeeccCCCCcchHHHH-----------HHcCCCCCeEcCHHHhcccccCCCCCccccCC
Confidence            458999999999864  99999993        4556           68999999999987644321       24778


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEecCC-c-HHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          254 ADELKKRFEQEGISLEKPVVTACGT-G-VTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       254 ~~~l~~~l~~~~~~~~~~vivyC~~-G-~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      .++|++.++++||+++++||+||+. | ..|+++||.|+.+|+ +|++||||+.+|..+| +|++++
T Consensus        74 ~~~~~~~l~~lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~-~v~iLdGG~~aW~~~G-~pv~t~  138 (156)
T d1okga1          74 CAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAG-LEMESG  138 (156)
T ss_dssp             HHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTT-CCEECS
T ss_pred             HHHHHHHHHhccccCCceEEEEeCCCCchHHHHHHHHHHHcCC-eeEEeCCCHHHHHHCC-CCCCCC
Confidence            9999999999999999999999854 3 579999999999996 7999999999999995 999875

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.87  E-value=1.5e-22  Score=163.02  Aligned_cols=117  Identities=17%  Similarity=0.210  Sum_probs=103.0

Q ss_pred             CCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhh------------hcCCcCceecCcccccccCCCCCCCC
Q 020963           18 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ------------VAHIPGALFFDVDGVADRTTNLPHML   85 (319)
Q Consensus        18 ~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~------------~ghIpgAi~ip~~~l~~~~~~~~~~~   85 (319)
                      .+...++|.+|+.+.+++++++|||+|         +..+|.            .||||||+|+|+..+....    ..+
T Consensus         7 ~~~~~i~~~~ev~~~l~~~~~~iiD~R---------~~~ef~G~~~~~~~~~~~~GhIpgA~~ip~~~~~~~~----~~~   73 (144)
T d1rhsa2           7 LNRSLLKTYEQVLENLESKRFQLVDSR---------AQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTED----GFE   73 (144)
T ss_dssp             CCGGGEECHHHHHHHHHHCCSEEEECS---------CHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTT----SCB
T ss_pred             cChHHeecHHHHHHHhcCCCcEEEECC---------CCHHHcCCCCCCccccceeeehhhhhhcchhhhhhhh----ccc
Confidence            455679999999999998899999999         778885            6999999999998765532    356


Q ss_pred             CCHHHHHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCC
Q 020963           86 PSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  148 (319)
Q Consensus        86 ~~~~~~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p  148 (319)
                      .+++++++++...+++++++||+||++|.+ |+.++++|+.+||++|++|+|||..|...+.|
T Consensus        74 ~~~~~l~~~~~~~gi~~~~~iI~yC~sG~~-A~~~~~~l~~lG~~~v~~YdGsw~eW~~~~~p  135 (144)
T d1rhsa2          74 KSPEELRAMFEAKKVDLTKPLIATCRKGVT-ACHIALAAYLCGKPDVAIYDGSWFEWFHRAPP  135 (144)
T ss_dssp             CCHHHHHHHHHHTTCCTTSCEEEECSSSST-HHHHHHHHHHTTCCCCEEESSHHHHHHHHSCG
T ss_pred             CCHHHHHHHHHHcCCCCCCCEEEEecccch-HHHHHHHHHHcCCCCCEEeCCCHHHHhhcCCC
Confidence            789999999999999999999999988764 99999999999999999999999999887644

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=1.1e-22  Score=162.34  Aligned_cols=104  Identities=18%  Similarity=0.270  Sum_probs=92.3

Q ss_pred             ccCHHHHHHHhhc-CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          191 IWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       191 ~is~~~l~~~~~~-~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      .|+++++.+.+.. .+++|||||++.||           ..||||||+|||...             |...+.++..+++
T Consensus        25 ~Is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpGAi~ip~~~-------------l~~~~~~l~~~~~   80 (136)
T d1yt8a1          25 SLAAEEVQALLDARAEAVILDARRFDEY-----------QTMSIPGGISVPGAE-------------LVLRVAELAPDPR   80 (136)
T ss_dssp             EECHHHHHHHHHTTCSEEEEECSCHHHH-----------HHSBCTTCEECCGGG-------------HHHHHHHHCCSTT
T ss_pred             ccCHHHHHHHHhcCCCcEEEEcCChhhc-----------cceecCCchhhhhhH-------------HHHHhhccccccc
Confidence            6899999998854 46899999999999           689999999999865             4455666677889


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCC-ceeeeCcHHHHhCCCCCCCccCC
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHD-VAVYDGSWTEWGAQPDTPVETSS  319 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~-v~~~~Gg~~~W~~~~~~p~~~~~  319 (319)
                      ++||+||.+|.||..++..|+.+||.| |++|.||+.+|..+| +|+++|.
T Consensus        81 ~~iV~~C~~g~rs~~aa~~L~~~G~~~~V~~L~GG~~~W~~~G-~pve~g~  130 (136)
T d1yt8a1          81 TRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTIGWTLAG-QQLEHGQ  130 (136)
T ss_dssp             SEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHHHHHHHTT-CCCBCSC
T ss_pred             ceEEEEcCCCCchHHHHHHHHHcCCCceEEEeCCcHHHHHHCC-CCceeCC
Confidence            999999999999999999999999986 999999999999995 9999873

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=6.7e-23  Score=157.18  Aligned_cols=99  Identities=23%  Similarity=0.314  Sum_probs=88.9

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .||++++.+.+++++++|||||++.||           ..||||||+|+|.+             +|.+.+.  .+++++
T Consensus         6 ~Is~~e~~~~l~~~~~~liDvR~~~e~-----------~~ghI~gA~~ip~~-------------~l~~~~~--~~~~~~   59 (108)
T d1gmxa_           6 CINVADAHQKLQEKEAVLVDIRDPQSF-----------AMGHAVQAFHLTND-------------TLGAFMR--DNDFDT   59 (108)
T ss_dssp             EECHHHHHHHHHTTCCEEEECSCHHHH-----------HHCEETTCEECCHH-------------HHHHHHH--HSCTTS
T ss_pred             EeCHHHHHHHHHCCCeEEEECCCHHHH-----------HhcCCCCcccccch-------------hHHHHhh--hccccC
Confidence            689999999998889999999999999           68999999999984             4566676  468899


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      +||+||.+|.||..++..|...||+||++|+||+.+|.++  +|++.
T Consensus        60 ~ivv~c~~g~rs~~~a~~L~~~G~~~v~~l~GG~~~W~~~--~p~e~  104 (108)
T d1gmxa_          60 PVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ--FPAEV  104 (108)
T ss_dssp             CEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH--CGGGE
T ss_pred             cccccCCCChHHHHHHHHHHHcCCCCEEEEcChHHHHHHc--CCCcc
Confidence            9999999999999999999999999999999999999754  67754

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=1.2e-21  Score=156.24  Aligned_cols=107  Identities=21%  Similarity=0.280  Sum_probs=92.6

Q ss_pred             CCcccHHHHHHhcCC-CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCC
Q 020963           21 EPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG   99 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~-~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   99 (319)
                      .+.|++++|.+++++ ++++|||||         +..+|..||||||+|+|...                 |...+..+.
T Consensus        23 ~~~Is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpGAi~ip~~~-----------------l~~~~~~l~   76 (136)
T d1yt8a1          23 TPSLAAEEVQALLDARAEAVILDAR---------RFDEYQTMSIPGGISVPGAE-----------------LVLRVAELA   76 (136)
T ss_dssp             CCEECHHHHHHHHHTTCSEEEEECS---------CHHHHHHSBCTTCEECCGGG-----------------HHHHHHHHC
T ss_pred             CCccCHHHHHHHHhcCCCcEEEEcC---------ChhhccceecCCchhhhhhH-----------------HHHHhhccc
Confidence            468999999999854 469999999         78899999999999999764                 444566677


Q ss_pred             CCCCCeEEEEcCCCcchhHHHHHHHHHhcCCc-eEEecCCHHHHHhCCCCcccCCC
Q 020963          100 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus       100 i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~-v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      .+++++||+||..|.+ +..++..|+..||.| |++|.||+.+|..+|+|++++.+
T Consensus        77 ~~~~~~iV~~C~~g~r-s~~aa~~L~~~G~~~~V~~L~GG~~~W~~~G~pve~g~~  131 (136)
T d1yt8a1          77 PDPRTRVIVNCAGRTR-SIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQT  131 (136)
T ss_dssp             CSTTSEEEEECSSSHH-HHHHHHHHHHTTCSSCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             ccccceEEEEcCCCCc-hHHHHHHHHHcCCCceEEEeCCcHHHHHHCCCCceeCCC
Confidence            7888999999987764 888899999999986 99999999999999999998754

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=9.5e-23  Score=159.05  Aligned_cols=111  Identities=15%  Similarity=0.251  Sum_probs=91.1

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .++...+.++++. +.+|||||++.||           ..||||||+|+|+..+.... .....+.+.++..  .+++++
T Consensus         9 ~i~~~~a~~l~~~-g~~liDvR~~~e~-----------~~ghi~ga~~ip~~~~~~~~-~~~~~~~~~~~~~--~~~~~~   73 (119)
T d1tq1a_           9 SVSVTVAHDLLLA-GHRYLDVRTPEEF-----------SQGHACGAINVPYMNRGASG-MSKNTDFLEQVSS--HFGQSD   73 (119)
T ss_dssp             EEEHHHHHHHHHH-TCCEEEESCHHHH-----------HHCCBTTBEECCSCCCSTTT-CCCTTTHHHHHTT--TCCTTS
T ss_pred             ccCHHHHHHHHHC-cCEEEECCCHHHH-----------HcCCCCCccchhhccccccc-ccccHHHHHHHHH--hcCCCc
Confidence            5777777777765 5789999999999           68999999999987654322 2233345555544  678999


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCcc
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVET  317 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~  317 (319)
                      +||+||++|.||..++..|..+||+||++|+|||.+|..++ +|++.
T Consensus        74 ~iv~~C~~G~rs~~a~~~L~~~G~~nv~~l~GG~~~W~~~g-~P~ea  119 (119)
T d1tq1a_          74 NIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG-LPTKA  119 (119)
T ss_dssp             SEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHT-CCCC-
T ss_pred             EEEEEcCCcCcHHHHHHHHHhcccCCeEEecChHHHHHHCC-CCccC
Confidence            99999999999999999999999999999999999999995 99873

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=2.7e-21  Score=154.89  Aligned_cols=115  Identities=23%  Similarity=0.375  Sum_probs=96.2

Q ss_pred             cHHHHHHhc---CCCCeEEEEeecCCCCCCCCchhhhh----------------hcCCcCceecCcccccccCCCCCCCC
Q 020963           25 SVDWLHANL---REPDLKVLDASWYMPDEQRNPFQEYQ----------------VAHIPGALFFDVDGVADRTTNLPHML   85 (319)
Q Consensus        25 s~~~l~~~l---~~~~~~iiDvR~~~~~~~r~~~~~~~----------------~ghIpgAi~ip~~~l~~~~~~~~~~~   85 (319)
                      ..+++.+.+   ++++.+|||+|         +..+|.                .||||||+|+|+..+.+.+    ..+
T Consensus         5 ~~~~v~~~~~~~~~~~~~lvD~R---------~~~ey~G~~~~~~~~~~~~~~r~GhIpgA~nlp~~~~~~~~----~~~   71 (141)
T d1uara2           5 YRDDVLEHIIKVKEGKGALVDVR---------SPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD----GTF   71 (141)
T ss_dssp             CHHHHHHHHHHHHTTSEEEEECS---------CHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT----SCB
T ss_pred             cHHHHHHHHHHhhCCCcEEEeCC---------CHHHcCCccCcccccCcccceeeeEeCCccccccccccccc----ccc
Confidence            445665554   45689999999         677875                7999999999998875532    356


Q ss_pred             CCHHHHHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHH-hcCCceEEecCCHHHHHh-CCCCcccCC
Q 020963           86 PSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV-FGHDRVWVLDGGLPRWRA-SGYDVESSA  153 (319)
Q Consensus        86 ~~~~~~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~-~G~~~v~~l~GG~~~W~~-~g~p~~~~~  153 (319)
                      .+.+++++.+...|++++++||+||+.|.+ |+.+++.|+. +||++|++|+|||.+|.+ .++|++++.
T Consensus        72 ~~~~~~~~~~~~~gi~~d~~vV~yC~~G~~-As~~~~~l~~~~G~~~v~~ydGs~~eW~~~~~~Pv~~g~  140 (141)
T d1uara2          72 KSAEELRALYEPLGITKDKDIVVYCRIAER-SSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE  140 (141)
T ss_dssp             CCHHHHHHHHGGGTCCTTSEEEEECSSHHH-HHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred             ccHHHHHHHHHHhCCCCCCeEEEEecCcch-HHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            889999999999999999999999998764 8889999985 799999999999999966 699998863

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=2.2e-21  Score=151.20  Aligned_cols=112  Identities=19%  Similarity=0.176  Sum_probs=90.1

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      +..|+++++.+++++ +.+|||||         +..+|..||||||+|+|+..+...     ......+.+.+..  ..+
T Consensus         7 p~~i~~~~a~~l~~~-g~~liDvR---------~~~e~~~ghi~ga~~ip~~~~~~~-----~~~~~~~~~~~~~--~~~   69 (119)
T d1tq1a_           7 PSSVSVTVAHDLLLA-GHRYLDVR---------TPEEFSQGHACGAINVPYMNRGAS-----GMSKNTDFLEQVS--SHF   69 (119)
T ss_dssp             CEEEEHHHHHHHHHH-TCCEEEES---------CHHHHHHCCBTTBEECCSCCCSTT-----TCCCTTTHHHHHT--TTC
T ss_pred             CCccCHHHHHHHHHC-cCEEEECC---------CHHHHHcCCCCCccchhhcccccc-----cccccHHHHHHHH--Hhc
Confidence            457899999998876 56899999         789999999999999998764331     1122333444442  235


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcc
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  150 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~  150 (319)
                      +++++||+||.+|.+ +..++..|+.+||+||++|+||+.+|.++|+|++
T Consensus        70 ~~~~~iv~~C~~G~r-s~~a~~~L~~~G~~nv~~l~GG~~~W~~~g~P~e  118 (119)
T d1tq1a_          70 GQSDNIIVGCQSGGR-SIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK  118 (119)
T ss_dssp             CTTSSEEEEESSCSH-HHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred             CCCcEEEEEcCCcCc-HHHHHHHHHhcccCCeEEecChHHHHHHCCCCcc
Confidence            688999999987764 8899999999999999999999999999999986

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=2.4e-21  Score=146.52  Aligned_cols=97  Identities=20%  Similarity=0.322  Sum_probs=84.6

Q ss_pred             ccCHHHHHHHh-hcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 020963          191 IWTLEQVKRNI-EEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  269 (319)
Q Consensus       191 ~is~~~l~~~~-~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~  269 (319)
                      ++|.++|.+.+ ..++++|||||++.||           ..||||||+|+|...+             ...+.....+++
T Consensus         3 v~S~~~l~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgAi~~~~~~~-------------~~~~~~~~~~~~   58 (101)
T d1yt8a2           3 VRTFHDIRAALLARRELALLDVREEDPF-----------AQAHPLFAANLPLSRL-------------ELEIHARVPRRD   58 (101)
T ss_dssp             EECHHHHHHHHHHTCCBEEEECSCHHHH-----------TTSBCTTCEECCGGGH-------------HHHHHHHSCCTT
T ss_pred             cCcHHHHHHHHHCCCCeEEEECCCHHHH-----------HhccCCCcccccccch-------------hhhhhhcccccC
Confidence            56788998876 4557999999999999           6899999999998664             334455567789


Q ss_pred             CCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCC
Q 020963          270 KPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQP  311 (319)
Q Consensus       270 ~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~  311 (319)
                      ++|++||.+|.+|..+++.|..+||+||++|+||+.+|..+|
T Consensus        59 ~~vv~~~~~g~~s~~~~~~l~~~G~~nV~~l~GG~~~W~~aG  100 (101)
T d1yt8a2          59 TPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAG  100 (101)
T ss_dssp             SCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTT
T ss_pred             ceeeeccchhhhHHHHHHHHHHcCCCcEEEeCChHHHHHHCc
Confidence            999999999999999999999999999999999999999886

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=6.8e-22  Score=161.61  Aligned_cols=101  Identities=21%  Similarity=0.350  Sum_probs=91.0

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .|+++++.+++++++++|||||+..+|           +.||||||+|+|...+             ...+.  .+++++
T Consensus         6 ~Is~~el~~~l~~~~~~ivDvR~~~e~-----------~~ghIpga~~~~~~~~-------------~~~~~--~~~~~~   59 (157)
T d1yt8a3           6 TIDPTTLADWLGEPGTRVLDFTASANY-----------AKRHIPGAAWVLRSQL-------------KQALE--RLGTAE   59 (157)
T ss_dssp             EECHHHHHHHTTSTTEEEEECSCHHHH-----------HHCBCTTCEECCGGGH-------------HHHHH--HHCCCS
T ss_pred             EECHHHHHHHHhCCCeEEEEeCCHHHH-----------hhcccccceecccccc-------------ccccc--ccccCc
Confidence            689999999998888999999999999           6899999999999664             23333  457899


Q ss_pred             CEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          271 PVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       271 ~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +||+||.+|.+|..++..|..+||.+|++|+||+.+|..+| +|++++
T Consensus        60 ~vv~~c~~g~rs~~~a~~l~~~G~~~v~~L~GG~~~W~~aG-lp~~~~  106 (157)
T d1yt8a3          60 RYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAG-LPTEDG  106 (157)
T ss_dssp             EEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTT-CCCBCS
T ss_pred             ceeeccCCcchHHHHHHHHhcccCceEEEecCCHHHHhhCC-CCCcCC
Confidence            99999999999999999999999999999999999999995 999975

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=3.7e-21  Score=147.32  Aligned_cols=101  Identities=20%  Similarity=0.274  Sum_probs=87.0

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      ...||++++.+++++++++|||||         +..+|..||||||+|+|..                 +|.+.+..  +
T Consensus         4 ~~~Is~~e~~~~l~~~~~~liDvR---------~~~e~~~ghI~gA~~ip~~-----------------~l~~~~~~--~   55 (108)
T d1gmxa_           4 FECINVADAHQKLQEKEAVLVDIR---------DPQSFAMGHAVQAFHLTND-----------------TLGAFMRD--N   55 (108)
T ss_dssp             CEEECHHHHHHHHHTTCCEEEECS---------CHHHHHHCEETTCEECCHH-----------------HHHHHHHH--S
T ss_pred             CCEeCHHHHHHHHHCCCeEEEECC---------CHHHHHhcCCCCcccccch-----------------hHHHHhhh--c
Confidence            457999999999988899999999         7899999999999999975                 34445555  4


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCccc
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  151 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~  151 (319)
                      +++++||+||..|.+ +..++..|+..||++|++|+||+.+|.+. +|++.
T Consensus        56 ~~~~~ivv~c~~g~r-s~~~a~~L~~~G~~~v~~l~GG~~~W~~~-~p~e~  104 (108)
T d1gmxa_          56 DFDTPVMVMCYHGNS-SKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEV  104 (108)
T ss_dssp             CTTSCEEEECSSSSH-HHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGE
T ss_pred             cccCcccccCCCChH-HHHHHHHHHHcCCCCEEEEcChHHHHHHc-CCCcc
Confidence            678999999987764 88999999999999999999999999754 77754

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=3e-20  Score=151.66  Aligned_cols=105  Identities=27%  Similarity=0.390  Sum_probs=90.9

Q ss_pred             CCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCC
Q 020963           21 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  100 (319)
Q Consensus        21 ~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i  100 (319)
                      ...||+++|.+++++++++|||||         +..+|..||||||+|+|...+.                 ..+..  +
T Consensus         4 ~~~Is~~el~~~l~~~~~~ivDvR---------~~~e~~~ghIpga~~~~~~~~~-----------------~~~~~--~   55 (157)
T d1yt8a3           4 ADTIDPTTLADWLGEPGTRVLDFT---------ASANYAKRHIPGAAWVLRSQLK-----------------QALER--L   55 (157)
T ss_dssp             CCEECHHHHHHHTTSTTEEEEECS---------CHHHHHHCBCTTCEECCGGGHH-----------------HHHHH--H
T ss_pred             CCEECHHHHHHHHhCCCeEEEEeC---------CHHHHhhcccccceeccccccc-----------------ccccc--c
Confidence            457999999999998889999999         7899999999999999986542                 22222  3


Q ss_pred             CCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCCC
Q 020963          101 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus       101 ~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      .++++||+||.+|.+ +..+++.|+.+||++|++|+||+.+|.++|+|+++...
T Consensus        56 ~~~~~vv~~c~~g~r-s~~~a~~l~~~G~~~v~~L~GG~~~W~~aGlp~~~~~~  108 (157)
T d1yt8a3          56 GTAERYVLTCGSSLL-ARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGES  108 (157)
T ss_dssp             CCCSEEEEECSSSHH-HHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSC
T ss_pred             ccCcceeeccCCcch-HHHHHHHHhcccCceEEEecCCHHHHhhCCCCCcCCCC
Confidence            578899999987764 88899999999999999999999999999999999764

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=99.83  E-value=1.9e-21  Score=155.28  Aligned_cols=104  Identities=18%  Similarity=0.322  Sum_probs=90.2

Q ss_pred             cccCHHHHHHHhh-cCCcEEEeccCCCcccCCCCCCCCCCCccc---cCCCcccCcccccCCCCCCCCHHHHHHHHHHcC
Q 020963          190 LIWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGH---VPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  265 (319)
Q Consensus       190 ~~is~~~l~~~~~-~~~~~liDvR~~~e~~g~~~~~~~~~~~gh---IpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~  265 (319)
                      ..||++++.+++. +++++|||||++.||           +.+|   |+||+|+|...+             ...+...+
T Consensus        23 ~~Isp~e~~~ll~~~~~~~lIDvR~~~E~-----------~~~hip~i~~a~~ip~~~l-------------~~~~~~~~   78 (137)
T d1qxna_          23 VMLSPKDAYKLLQENPDITLIDVRDPDEL-----------KAMGKPDVKNYKHMSRGKL-------------EPLLAKSG   78 (137)
T ss_dssp             EEECHHHHHHHHHHCTTSEEEECCCHHHH-----------HHTCEECCSSEEECCTTTS-------------HHHHHHHC
T ss_pred             CEEcHHHHHHHHHcCcCEEEEECCcHHHH-----------HHhccccccccccCCcccc-------------cccccccc
Confidence            4799999999985 467999999999999           5677   567788887553             34566668


Q ss_pred             CCCCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          266 ISLEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       266 ~~~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      ++++++|||||.+|.||..++..|..+||+||++|+||+.+|..+| +|++..
T Consensus        79 ~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~nV~~l~GG~~~W~~~g-~P~~~~  130 (137)
T d1qxna_          79 LDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEG-LPSLDR  130 (137)
T ss_dssp             CCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTT-CCEECC
T ss_pred             cCcccceeeeecccchHHHHHHHHHHcCCCcEEEecCHHHHHHHcC-CCCCCC
Confidence            9999999999999999999999999999999999999999999996 998754

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=8.5e-21  Score=150.51  Aligned_cols=115  Identities=20%  Similarity=0.294  Sum_probs=90.3

Q ss_pred             CCCCCCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 020963           16 SVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV   95 (319)
Q Consensus        16 ~~~~~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~   95 (319)
                      ++.++...|+++||.+++++++++|||||         +..+|..||||||+|+|+..+..             .+.+.+
T Consensus         2 a~~~~v~~I~~~el~~~~~~~~v~iIDvR---------~~~e~~~ghIpgAinip~~~~~~-------------~~~~~~   59 (132)
T d1t3ka_           2 AMARSISYITSTQLLPLHRRPNIAIIDVR---------DEERNYDGHIAGSLHYASGSFDD-------------KISHLV   59 (132)
T ss_dssp             CCCSSSEEECTTTTTTCCCCTTEEEEEES---------CSHHHHSSCCCSSEEECCSSSST-------------THHHHH
T ss_pred             CcccCCCEECHHHHHHHHhCCCeEEEEcc---------CHHHHHhccCcccceeeeecccc-------------cccccc
Confidence            35566789999999999999899999999         67899999999999999987643             233444


Q ss_pred             HhCCCCCCCeEEEEcCCCcchhHHHHH--------HHHHhcCCceEEecCCHHHHHhCCCCcccCCC
Q 020963           96 SALGLENKDGLVVYDGKGIFSAARVWW--------MFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  154 (319)
Q Consensus        96 ~~~~i~~~~~vvly~~~g~~~a~~~~~--------~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  154 (319)
                      ..  ..+++++|+||..+..++..++.        .|+.+||+||++|+||+.+|.++|+|+.+...
T Consensus        60 ~~--~~~~~~iv~~c~~~~~~~~~aa~~l~~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~pv~~~~~  124 (132)
T d1t3ka_          60 QN--VKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE  124 (132)
T ss_dssp             HT--CCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred             cc--cccccceEEEeccccccchHHHHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHcCCCcccCCC
Confidence            33  35678899999766544443333        33456999999999999999999999988653

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=9.1e-21  Score=147.71  Aligned_cols=108  Identities=25%  Similarity=0.361  Sum_probs=94.6

Q ss_pred             CCCcccHHHHHHhcCCCCeEEEEeecCCCCCCCCchhhhh-----------hcCCcCceecCcccccccCCCCCCCCCCH
Q 020963           20 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLPSE   88 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~-----------~ghIpgAi~ip~~~l~~~~~~~~~~~~~~   88 (319)
                      +...++.+|+..++++++++|||+|         +.++|.           .||||||+|+|+..+..     ...+.+.
T Consensus         2 p~~~~~~~ev~~~~~~~~~~liD~R---------~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~-----~~~~~~~   67 (120)
T d1urha2           2 PEAVVKVTDVLLASHENTAQIIDAR---------PAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-----EGELKTT   67 (120)
T ss_dssp             GGGBCCHHHHHHHHHHTCSEEEECS---------CHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-----SSSBCCH
T ss_pred             hhHHccHHHHHHHhhCCCcEEEeCC---------CHHHcCcccCCcccccccccccccchhchhhccc-----ccccCCH
Confidence            3457899999999998899999999         677774           79999999999977544     2456778


Q ss_pred             HHHHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHH
Q 020963           89 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW  142 (319)
Q Consensus        89 ~~~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W  142 (319)
                      +++.+.+...+++++++||+||++|.+ |+.+++.|+.+||++|++|+|||.+|
T Consensus        68 ~~~~~~~~~~g~~~~~~ii~yC~sG~~-A~~~~~~L~~lG~~~v~~y~Gs~~eW  120 (120)
T d1urha2          68 DELDAIFFGRGVSYDKPIIVSCGSGVT-AAVVLLALATLDVPNVKLYDGAWSEW  120 (120)
T ss_dssp             HHHHHHHHTTTCCSSSCEEEECCSSST-HHHHHHHHHHTTCSSCEEECCSCCC-
T ss_pred             HHhhhhhhhcccCccCceEEEccchhH-HHHHHHHHHHcCCCCceEcCCChhhC
Confidence            899999999999999999999998765 99999999999999999999999988

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.82  E-value=1.9e-20  Score=141.43  Aligned_cols=98  Identities=24%  Similarity=0.262  Sum_probs=82.2

Q ss_pred             cccHHHHHHhcC-CCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhCCCC
Q 020963           23 VVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  101 (319)
Q Consensus        23 ~Is~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~  101 (319)
                      ..|+++|.+++. +++++|||||         +..+|..||||||+|+|...+                 ...+......
T Consensus         3 v~S~~~l~~~l~~~~~~~liDvR---------~~~e~~~ghIpgAi~~~~~~~-----------------~~~~~~~~~~   56 (101)
T d1yt8a2           3 VRTFHDIRAALLARRELALLDVR---------EEDPFAQAHPLFAANLPLSRL-----------------ELEIHARVPR   56 (101)
T ss_dssp             EECHHHHHHHHHHTCCBEEEECS---------CHHHHTTSBCTTCEECCGGGH-----------------HHHHHHHSCC
T ss_pred             cCcHHHHHHHHHCCCCeEEEECC---------CHHHHHhccCCCcccccccch-----------------hhhhhhcccc
Confidence            468999999874 4579999999         789999999999999998643                 2234455566


Q ss_pred             CCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCC
Q 020963          102 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  147 (319)
Q Consensus       102 ~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~  147 (319)
                      ++++||+||..+. ++..+++.|+.+||+||++|+||+.+|+++|.
T Consensus        57 ~~~~vv~~~~~g~-~s~~~~~~l~~~G~~nV~~l~GG~~~W~~aGg  101 (101)
T d1yt8a2          57 RDTPITVYDDGEG-LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGG  101 (101)
T ss_dssp             TTSCEEEECSSSS-HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTC
T ss_pred             cCceeeeccchhh-hHHHHHHHHHHcCCCcEEEeCChHHHHHHCcC
Confidence            7788888887665 58999999999999999999999999999874

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=99.81  E-value=5.1e-20  Score=146.83  Aligned_cols=106  Identities=17%  Similarity=0.275  Sum_probs=90.4

Q ss_pred             CCcccHHHHHHhcC-CCCeEEEEeecCCCCCCCCchhhhhhcC---CcCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 020963           21 EPVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAH---IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS   96 (319)
Q Consensus        21 ~~~Is~~~l~~~l~-~~~~~iiDvR~~~~~~~r~~~~~~~~gh---IpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~   96 (319)
                      ...||++++.++++ +++++|||||         ...+|..+|   |+||+|+|...+                 ...+.
T Consensus        22 ~~~Isp~e~~~ll~~~~~~~lIDvR---------~~~E~~~~hip~i~~a~~ip~~~l-----------------~~~~~   75 (137)
T d1qxna_          22 MVMLSPKDAYKLLQENPDITLIDVR---------DPDELKAMGKPDVKNYKHMSRGKL-----------------EPLLA   75 (137)
T ss_dssp             SEEECHHHHHHHHHHCTTSEEEECC---------CHHHHHHTCEECCSSEEECCTTTS-----------------HHHHH
T ss_pred             CCEEcHHHHHHHHHcCcCEEEEECC---------cHHHHHHhccccccccccCCcccc-----------------ccccc
Confidence            45899999999996 4579999999         678999999   667889987644                 23455


Q ss_pred             hCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcccCC
Q 020963           97 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  153 (319)
Q Consensus        97 ~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  153 (319)
                      ..+++++++|||||..|.+ +..++..|+.+||+||++|+||+.+|.++|+|+....
T Consensus        76 ~~~~~~~~~ivvyC~~G~r-s~~aa~~L~~~G~~nV~~l~GG~~~W~~~g~P~~~~~  131 (137)
T d1qxna_          76 KSGLDPEKPVVVFCKTAAR-AALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS  131 (137)
T ss_dssp             HHCCCTTSCEEEECCSSSC-HHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCC
T ss_pred             ccccCcccceeeeecccch-HHHHHHHHHHcCCCcEEEecCHHHHHHHcCCCCCCCC
Confidence            5678899999999987765 8899999999999999999999999999999987653

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.79  E-value=2.7e-20  Score=147.15  Aligned_cols=98  Identities=26%  Similarity=0.286  Sum_probs=85.3

Q ss_pred             cccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 020963          190 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  267 (319)
Q Consensus       190 ~~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~  267 (319)
                      ..|+++++.+.+.++  +++|||||++.||           ..||||||+|+|+.++..             .+.....+
T Consensus        23 ~~I~~~e~~~~l~~~~~~~~liDvR~~~e~-----------~~ghipgai~~p~~~~~~-------------~~~~~~~~   78 (130)
T d1yt8a4          23 ERLDLAGLAQWQDEHDRTTYLLDVRTPEEY-----------EAGHLPGSRSTPGGQLVQ-------------ETDHVASV   78 (130)
T ss_dssp             EEECHHHHHHHHHCTTSCEEEEECSCHHHH-----------HHCBCTTCEECCHHHHHH-------------SHHHHCCS
T ss_pred             cccCHHHHHHHHHccCCCEEEEECCCcHHH-----------hcCccCCccccccccccc-------------ccccccCC
Confidence            378999999998654  4899999999999           689999999999966532             34445778


Q ss_pred             CCCCEEEecCCcHHHHHHHHHHHhcCCCCceeeeCcHHHHhCCCC
Q 020963          268 LEKPVVTACGTGVTACILALGLNRLGKHDVAVYDGSWTEWGAQPD  312 (319)
Q Consensus       268 ~~~~vivyC~~G~ra~~~~~~L~~~G~~~v~~~~Gg~~~W~~~~~  312 (319)
                      ++++||+||.+|.||..++..|+.+|| ++++|+||+.+|..+++
T Consensus        79 ~~~~ivl~C~~G~rS~~aa~~L~~~G~-~v~~l~GG~~aw~~~~g  122 (130)
T d1yt8a4          79 RGARLVLVDDDGVRANMSASWLAQMGW-QVAVLDGLSEADFSERG  122 (130)
T ss_dssp             BTCEEEEECSSSSHHHHHHHHHHHTTC-EEEEECSCCGGGCCBCS
T ss_pred             ccceEEeecCCCccHHHHHHHHHHcCC-CeEEEcCchHHHHHhcC
Confidence            999999999999999999999999999 69999999999988753

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=1.4e-20  Score=149.24  Aligned_cols=105  Identities=17%  Similarity=0.236  Sum_probs=84.3

Q ss_pred             ccCHHHHHHHhhcCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          191 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       191 ~is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .|+++++.+++++++++|||||++.+|           ..||||||+|+|+..+..         .+.+++.  .+.+++
T Consensus         9 ~I~~~el~~~~~~~~v~iIDvR~~~e~-----------~~ghIpgAinip~~~~~~---------~~~~~~~--~~~~~~   66 (132)
T d1t3ka_           9 YITSTQLLPLHRRPNIAIIDVRDEERN-----------YDGHIAGSLHYASGSFDD---------KISHLVQ--NVKDKD   66 (132)
T ss_dssp             EECTTTTTTCCCCTTEEEEEESCSHHH-----------HSSCCCSSEEECCSSSST---------THHHHHH--TCCSCC
T ss_pred             EECHHHHHHHHhCCCeEEEEccCHHHH-----------HhccCcccceeeeecccc---------ccccccc--cccccc
Confidence            688899999998889999999999999           689999999999987643         2444555  567788


Q ss_pred             CEEEecCCcH-HHHHHHHHH--------HhcCCCCceeeeCcHHHHhCCCCCCCccC
Q 020963          271 PVVTACGTGV-TACILALGL--------NRLGKHDVAVYDGSWTEWGAQPDTPVETS  318 (319)
Q Consensus       271 ~vivyC~~G~-ra~~~~~~L--------~~~G~~~v~~~~Gg~~~W~~~~~~p~~~~  318 (319)
                      +||+||..|. |+..++..|        ..+||+||++|+||+.+|..++ +|+.++
T Consensus        67 ~iv~~c~~~~~~~~~aa~~l~~~~~~~l~~~G~~~v~~l~GG~~~W~~~g-~pv~~~  122 (132)
T d1t3ka_          67 TLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASG-KPVCRC  122 (132)
T ss_dssp             EEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHS-CSSCCC
T ss_pred             ceEEEeccccccchHHHHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHcC-CCcccC
Confidence            9999997543 444433332        3579999999999999999995 999864

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.76  E-value=1.8e-19  Score=143.89  Aligned_cols=111  Identities=16%  Similarity=0.213  Sum_probs=85.9

Q ss_pred             HHhcCCCCeEEEEeecCCCCCCCCchhhhh-----------hcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHhC
Q 020963           30 HANLREPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        30 ~~~l~~~~~~iiDvR~~~~~~~r~~~~~~~-----------~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~   98 (319)
                      .+.+. ++++|||+|         +.++|.           .||||||+|+|+..+...... ...+.+.+++.+.+...
T Consensus         6 ~~~~~-p~~vlvD~R---------~~~ef~G~~~~~~~~~~~GHIpgAvnip~~~~~~~~~~-~~~~~~~~~l~~~~~~~   74 (139)
T d1okga2           6 VDEIP-PQAIITDAR---------SADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGD-GKVLRSEEEIRHNIMTV   74 (139)
T ss_dssp             GGGSC-TTCCEEECS---------CHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSS-SCEECCHHHHHHHHHTT
T ss_pred             eccCC-CCeEEEeCC---------CHHHhCCcCCCcccCCcCceeCCCeeccchhhcccccc-ccccCCHHHhhhhhhhh
Confidence            34444 479999999         677776           799999999999765332211 23456788888777654


Q ss_pred             -----CCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHh-CCCCcccC
Q 020963           99 -----GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESS  152 (319)
Q Consensus        99 -----~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~-~g~p~~~~  152 (319)
                           ++.++++||+||+.|. +|+.++++|+.+||++|++|+|||.+|.+ .++|++++
T Consensus        75 ~~~~~~~~~~~~vV~yC~sG~-~Aa~~~~~L~~~G~~~v~vydGsw~eW~~~~~~Pv~~~  133 (139)
T d1okga2          75 VQGAGDAADLSSFVFSCGSGV-TACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS  133 (139)
T ss_dssp             CC-----CCCTTSEEECSSSS-THHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred             hhhccCCCCCCeEEEECCCcH-HHHHHHHHHHHhCCCCccCCCCCHHHHhCCCCCCeeec
Confidence                 5677889999999876 48999999999999999999999999965 57788764

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=6.2e-19  Score=139.22  Aligned_cols=103  Identities=19%  Similarity=0.138  Sum_probs=85.6

Q ss_pred             CCCcccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHHHHHh
Q 020963           20 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA   97 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~   97 (319)
                      ....|+++++.++++++  +++|||||         +..+|..||||||+|+|+..+.                 .....
T Consensus        21 ~~~~I~~~e~~~~l~~~~~~~~liDvR---------~~~e~~~ghipgai~~p~~~~~-----------------~~~~~   74 (130)
T d1yt8a4          21 GVERLDLAGLAQWQDEHDRTTYLLDVR---------TPEEYEAGHLPGSRSTPGGQLV-----------------QETDH   74 (130)
T ss_dssp             TCEEECHHHHHHHHHCTTSCEEEEECS---------CHHHHHHCBCTTCEECCHHHHH-----------------HSHHH
T ss_pred             CCcccCHHHHHHHHHccCCCEEEEECC---------CcHHHhcCccCCcccccccccc-----------------ccccc
Confidence            35789999999999653  58999999         7789999999999999986542                 23345


Q ss_pred             CCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCHHHHHhCCCCcc
Q 020963           98 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  150 (319)
Q Consensus        98 ~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~  150 (319)
                      +...++++|||||.+|. +|..++..|+.+|| +|++|+||+.+|..++....
T Consensus        75 ~~~~~~~~ivl~C~~G~-rS~~aa~~L~~~G~-~v~~l~GG~~aw~~~~g~~~  125 (130)
T d1yt8a4          75 VASVRGARLVLVDDDGV-RANMSASWLAQMGW-QVAVLDGLSEADFSERGAWS  125 (130)
T ss_dssp             HCCSBTCEEEEECSSSS-HHHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSCC
T ss_pred             ccCCccceEEeecCCCc-cHHHHHHHHHHcCC-CeEEEcCchHHHHHhcCCCC
Confidence            56788999999998775 58999999999999 79999999999988765433

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.8e-17  Score=135.40  Aligned_cols=103  Identities=16%  Similarity=0.133  Sum_probs=78.0

Q ss_pred             CCCCcccHHHHHHhcCC------CCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHH
Q 020963           19 PKEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFA   92 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~~------~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~   92 (319)
                      ...+.||+++|.+++++      ++++|||||         ...+|..||||||+|+|....                +.
T Consensus        20 ~~~k~Is~~~l~~ll~~~~~~~~~~~~IIDvR---------~~~Ey~~gHI~gAinip~~~~----------------~~   74 (161)
T d1c25a_          20 QDLKYISPEIMASVLNGKFANLIKEFVIIDCR---------YPYEYEGGHIKGAVNLHMEEE----------------VE   74 (161)
T ss_dssp             TTSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHH----------------HH
T ss_pred             CCCCccCHHHHHHHHhhhhhcccCCEEEEECC---------CHHHHHhhhcCCcEEcCcHHH----------------HH
Confidence            34678999999999975      269999999         788999999999999996532                11


Q ss_pred             HHHHhC----CCCCCCeEEEEcCCCcchhHHHHHHHHHh----------cCCceEEecCCHHHHHhCC
Q 020963           93 AAVSAL----GLENKDGLVVYDGKGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRASG  146 (319)
Q Consensus        93 ~~~~~~----~i~~~~~vvly~~~g~~~a~~~~~~l~~~----------G~~~v~~l~GG~~~W~~~g  146 (319)
                      ..+...    ...++..||+||+.++.++.+++..|+..          ||++|++|+|||.+|.+..
T Consensus        75 ~~l~~~~~~~~~~~~~~vV~yc~~s~~rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~~  142 (161)
T d1c25a_          75 DFLLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKC  142 (161)
T ss_dssp             HHTTTSCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHH
T ss_pred             HHHhhhhhhhhhccCCeEEEEeccccccHHHHHHHHHHHHHhhccccccCCCeEEEECCcHHHHHHHC
Confidence            111111    22344668889976555678888888765          9999999999999998764

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.9e-17  Score=130.09  Aligned_cols=110  Identities=18%  Similarity=0.235  Sum_probs=75.0

Q ss_pred             cccHHHHHHhcCCC--CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCC--CCCCCCCHHHHHHHHHhC
Q 020963           23 VVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN--LPHMLPSEEAFAAAVSAL   98 (319)
Q Consensus        23 ~Is~~~l~~~l~~~--~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~--~~~~~~~~~~~~~~~~~~   98 (319)
                      .||++||.++++++  +++|||||         +..+|..+|||||+|||...+......  +...++  ....+.+.. 
T Consensus         2 ~Is~~eL~~~l~~~~~~~liiDvR---------~~~ey~~~hI~gAinip~~~l~~~~~~~~l~~~~~--~~~~~~~~~-   69 (135)
T d2gwfa1           2 AITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLP--DDSKDTWKK-   69 (135)
T ss_dssp             EECHHHHHHHHHSTTSCEEEEECS---------CHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSC--HHHHHHHHT-
T ss_pred             eECHHHHHHHHhcCCCCEEEEEec---------CCccccCCccCCeEEeCHHHcccccchhhhhhhhh--HHHHHHHhc-
Confidence            69999999999754  59999999         789999999999999998876432110  111111  122233333 


Q ss_pred             CCCCCCeEEEEcCCCcch----hHHHHHHHH--------HhcCCceEEecCCHHHHHhC
Q 020963           99 GLENKDGLVVYDGKGIFS----AARVWWMFR--------VFGHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus        99 ~i~~~~~vvly~~~g~~~----a~~~~~~l~--------~~G~~~v~~l~GG~~~W~~~  145 (319)
                       ....+.||+||..+...    +..+..+++        ..|..+|++|+|||.+|.+.
T Consensus        70 -~~~~~~iV~yd~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~w~~~  127 (135)
T d2gwfa1          70 -RGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC  127 (135)
T ss_dssp             -TTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred             -cCCCCeEEEEeCCCCcccHHHHHHHHHHHHHHhcccccccCCCcEEEEechHHHHHHh
Confidence             34678899998765432    222222222        23667899999999999987

>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.9e-16  Score=130.82  Aligned_cols=106  Identities=16%  Similarity=0.176  Sum_probs=77.5

Q ss_pred             CCCcccHHHHHHhcCCC------CeEEEEeecCCCCCCCCchhhhhhcCCcCceecCcccccccCCCCCCCCCCHHHHHH
Q 020963           20 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA   93 (319)
Q Consensus        20 ~~~~Is~~~l~~~l~~~------~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~   93 (319)
                      .-+.||+++|.++++++      +++|||||         +..+|..|||+||+|+|...+....           .+..
T Consensus        21 ~~k~Isp~eL~~ll~~~~~~~~~~~lIID~R---------~~~Ey~~gHI~gAiNi~~~~~~~~~-----------~~~~   80 (174)
T d1ymka1          21 DLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAESF-----------LLKS   80 (174)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHHHH-----------HHTT
T ss_pred             CCcEeCHHHHHHHHhhhhhcccCCEEEEECC---------CchhhhhhhcCCccccCchHHHHHH-----------HHHh
Confidence            35689999999999753      59999999         7889999999999999986432100           0000


Q ss_pred             HHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHh----------cCCceEEecCCHHHHHhC
Q 020963           94 AVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRAS  145 (319)
Q Consensus        94 ~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~----------G~~~v~~l~GG~~~W~~~  145 (319)
                      .......++...||+||..+..++..++..|+..          ||++|++|+|||.+|.+.
T Consensus        81 ~~~~~~~~~~~~vV~yc~~s~~r~~~~a~~l~~~~~~~~~~~~~g~~~VyiL~GGf~~f~~~  142 (174)
T d1ymka1          81 PIAPCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQ  142 (174)
T ss_dssp             TCCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred             hhhhhhhccCceEEEEeCCCCchHHHHHHHHHHHHHHhhhccccCCceEEEecCcHHHHHHh
Confidence            0001122455679999987666678888888754          999999999999999765

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.8e-16  Score=126.40  Aligned_cols=117  Identities=19%  Similarity=0.363  Sum_probs=83.0

Q ss_pred             CCCCcccHHHHHHhcC--CCCeEEEEeecCCCCCCCCchhhhhhcCCcCceecCccccc-----ccCCCCCCCCCCHHHH
Q 020963           19 PKEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVA-----DRTTNLPHMLPSEEAF   91 (319)
Q Consensus        19 ~~~~~Is~~~l~~~l~--~~~~~iiDvR~~~~~~~r~~~~~~~~ghIpgAi~ip~~~l~-----~~~~~~~~~~~~~~~~   91 (319)
                      .....||++||.++++  +++++|||||         +..+|..||||||+|+|+..+.     .....+...++..+..
T Consensus        13 ~~~~~~s~e~L~~~l~~~~~~~lilDvR---------~~~ey~~~HI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (154)
T d1hzma_          13 EMAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDR   83 (154)
T ss_dssp             CCSSBSCCCCHHHHHHHCSSSCEEECCS---------TTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHH
T ss_pred             cccCccCHHHHHHHHhcCCCCEEEEECC---------CHHHHhcCCCCCCcccCcHHHHhhhccCCcccccccCCcHHHH
Confidence            4566799999999995  4579999999         7899999999999999986531     1122234445544444


Q ss_pred             HHHHHhCCCCCCCeEEEEcCCCc------chhHHHHHHHHHhcC--CceEEecCCHHHHHhCCCC
Q 020963           92 AAAVSALGLENKDGLVVYDGKGI------FSAARVWWMFRVFGH--DRVWVLDGGLPRWRASGYD  148 (319)
Q Consensus        92 ~~~~~~~~i~~~~~vvly~~~g~------~~a~~~~~~l~~~G~--~~v~~l~GG~~~W~~~g~p  148 (319)
                      ... ..  ..+++.||+||..+.      ..+.++.++++.+|.  .+|++|+|||.+|.+. +|
T Consensus        84 ~~~-~~--~~~~~~VVvYd~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~iL~GG~~~w~~~-yp  144 (154)
T d1hzma_          84 DRF-TR--RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGGFSKFQAE-FS  144 (154)
T ss_dssp             HHH-HH--STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCCCEECCCCHHHHHHH-HC
T ss_pred             HHH-hh--cCCCCeEEEEcCCCchhhhhHHHHHHHHHHHHHHHhcCCeEEEEeCcHHHHHHH-Ch
Confidence            433 33  345678999986532      235577777776653  4899999999999875 44

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=6.3e-17  Score=132.11  Aligned_cols=98  Identities=13%  Similarity=0.199  Sum_probs=76.2

Q ss_pred             cccCHHHHHHHhhc------CCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  263 (319)
Q Consensus       190 ~~is~~~l~~~~~~------~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~  263 (319)
                      ..||++++.+++++      ++++|||||++.||           ..||||||+|+|..+..            ...+.+
T Consensus        23 k~Is~~~l~~ll~~~~~~~~~~~~IIDvR~~~Ey-----------~~gHI~gAinip~~~~~------------~~~l~~   79 (161)
T d1c25a_          23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEY-----------EGGHIKGAVNLHMEEEV------------EDFLLK   79 (161)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHH------------HHHTTT
T ss_pred             CccCHHHHHHHHhhhhhcccCCEEEEECCCHHHH-----------HhhhcCCcEEcCcHHHH------------HHHHhh
Confidence            36999999998864      36999999999999           68999999999975532            111111


Q ss_pred             ----cCCCCCCCEEEecC-CcHHHHHHHHHHHh----------cCCCCceeeeCcHHHHhCC
Q 020963          264 ----EGISLEKPVVTACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       264 ----~~~~~~~~vivyC~-~G~ra~~~~~~L~~----------~G~~~v~~~~Gg~~~W~~~  310 (319)
                          ....+...||+||. +|.|+..++..|+.          +||.+|++|+||+.+|...
T Consensus        80 ~~~~~~~~~~~~vV~yc~~s~~rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~  141 (161)
T d1c25a_          80 KPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMK  141 (161)
T ss_dssp             SCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHH
T ss_pred             hhhhhhhccCCeEEEEeccccccHHHHHHHHHHHHHhhccccccCCCeEEEECCcHHHHHHH
Confidence                12344567999996 78899988888864          3999999999999999764

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.5e-15  Score=119.95  Aligned_cols=108  Identities=19%  Similarity=0.290  Sum_probs=76.5

Q ss_pred             ccccCHHHHHHHhh--cCCcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCC--------CCCCCCHHHHH
Q 020963          189 HLIWTLEQVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--------SQTLLPADELK  258 (319)
Q Consensus       189 ~~~is~~~l~~~~~--~~~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~--------~~~~~~~~~l~  258 (319)
                      ...+|++||.++++  +++++|||||+..||           ..||||||+|+|+..+...        ...+....+..
T Consensus        15 ~~~~s~e~L~~~l~~~~~~~lilDvR~~~ey-----------~~~HI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (154)
T d1hzma_          15 AISKTVAWLNEQLELGNERLLLMDCRPQELY-----------ESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDR   83 (154)
T ss_dssp             SSBSCCCCHHHHHHHCSSSCEEECCSTTHHH-----------HHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHH
T ss_pred             cCccCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hcCCCCCCcccCcHHHHhhhccCCcccccccCCcHHHH
Confidence            45788999999986  457999999999999           6899999999998664211        11233334445


Q ss_pred             HHHHHcCCCCCCCEEEecCCcHH-------HHHHHHH---HHhcCCCCceeeeCcHHHHhCC
Q 020963          259 KRFEQEGISLEKPVVTACGTGVT-------ACILALG---LNRLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       259 ~~l~~~~~~~~~~vivyC~~G~r-------a~~~~~~---L~~~G~~~v~~~~Gg~~~W~~~  310 (319)
                      ..+.  +...+++||+||..|..       +...+++   |...|+ +|++|+||+.+|...
T Consensus        84 ~~~~--~~~~~~~VVvYd~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~v~iL~GG~~~w~~~  142 (154)
T d1hzma_          84 DRFT--RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGC-RAFYLEGGFSKFQAE  142 (154)
T ss_dssp             HHHH--HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTC-CCEECCCCHHHHHHH
T ss_pred             HHHh--hcCCCCeEEEEcCCCchhhhhHHHHHHHHHHHHHHHhcCC-eEEEEeCcHHHHHHH
Confidence            5555  45667899999976431       2233444   444454 699999999999875

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=3e-15  Score=118.19  Aligned_cols=106  Identities=16%  Similarity=0.188  Sum_probs=75.3

Q ss_pred             ccCHHHHHHHhhcC--CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCC-----CCCHHHHHHHHHH
Q 020963          191 IWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT-----LLPADELKKRFEQ  263 (319)
Q Consensus       191 ~is~~~l~~~~~~~--~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~-----~~~~~~l~~~l~~  263 (319)
                      .||++||.++++++  +++|||+|+..+|           ..||||||+|||+..+......     ... ...++.+. 
T Consensus         2 ~Is~~eL~~~l~~~~~~~liiDvR~~~ey-----------~~~hI~gAinip~~~l~~~~~~~~l~~~~~-~~~~~~~~-   68 (135)
T d2gwfa1           2 AITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLP-DDSKDTWK-   68 (135)
T ss_dssp             EECHHHHHHHHHSTTSCEEEEECSCHHHH-----------HHSCBTTCEECCGGGCCTTCCHHHHHHTSC-HHHHHHHH-
T ss_pred             eECHHHHHHHHhcCCCCEEEEEecCCccc-----------cCCccCCeEEeCHHHcccccchhhhhhhhh-HHHHHHHh-
Confidence            58899999998764  4999999999999           6899999999999887543210     011 22223333 


Q ss_pred             cCCCCCCCEEEecCCcHH----HH-HH---HHHHH-----hcCCCCceeeeCcHHHHhCC
Q 020963          264 EGISLEKPVVTACGTGVT----AC-IL---ALGLN-----RLGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       264 ~~~~~~~~vivyC~~G~r----a~-~~---~~~L~-----~~G~~~v~~~~Gg~~~W~~~  310 (319)
                       .....+.||+||..+..    +. ..   ...|.     ..|..+|++|+||+.+|...
T Consensus        69 -~~~~~~~iV~yd~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~w~~~  127 (135)
T d2gwfa1          69 -KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC  127 (135)
T ss_dssp             -TTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred             -ccCCCCeEEEEeCCCCcccHHHHHHHHHHHHHHhcccccccCCCcEEEEechHHHHHHh
Confidence             55678899999986532    11 11   22232     24667899999999999987

>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.4e-15  Score=125.55  Aligned_cols=103  Identities=14%  Similarity=0.206  Sum_probs=75.7

Q ss_pred             cccCHHHHHHHhhcC------CcEEEeccCCCcccCCCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 020963          190 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  263 (319)
Q Consensus       190 ~~is~~~l~~~~~~~------~~~liDvR~~~e~~g~~~~~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~  263 (319)
                      ..|++++|.++++.+      +++|||||++.||           ..|||+||+|+|...+....       .+......
T Consensus        23 k~Isp~eL~~ll~~~~~~~~~~~lIID~R~~~Ey-----------~~gHI~gAiNi~~~~~~~~~-------~~~~~~~~   84 (174)
T d1ymka1          23 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAESF-------LLKSPIAP   84 (174)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHHHH-------HHTTTCCC
T ss_pred             cEeCHHHHHHHHhhhhhcccCCEEEEECCCchhh-----------hhhhcCCccccCchHHHHHH-------HHHhhhhh
Confidence            369999999998642      5999999999999           68999999999986642100       00000001


Q ss_pred             cCCCCCCCEEEecC-CcHHHHHHHHHHHh----------cCCCCceeeeCcHHHHhCC
Q 020963          264 EGISLEKPVVTACG-TGVTACILALGLNR----------LGKHDVAVYDGSWTEWGAQ  310 (319)
Q Consensus       264 ~~~~~~~~vivyC~-~G~ra~~~~~~L~~----------~G~~~v~~~~Gg~~~W~~~  310 (319)
                      ...++.++||+||. ++.|+..++..|+.          .||.+|++|+||+.+|...
T Consensus        85 ~~~~~~~~vV~yc~~s~~r~~~~a~~l~~~~~~~~~~~~~g~~~VyiL~GGf~~f~~~  142 (174)
T d1ymka1          85 CSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQ  142 (174)
T ss_dssp             ----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred             hhhccCceEEEEeCCCCchHHHHHHHHHHHHHHhhhccccCCceEEEecCcHHHHHHh
Confidence            13355678999997 56788888888764          4999999999999999775

>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Putative phosphatase At1g05000
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.10  E-value=0.24  Score=37.30  Aligned_cols=98  Identities=10%  Similarity=-0.024  Sum_probs=48.4

Q ss_pred             cCHHHHHHHhhcCCcEEEeccCCCcccCCCCC-CCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 020963          192 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPE-PRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  270 (319)
Q Consensus       192 is~~~l~~~~~~~~~~liDvR~~~e~~g~~~~-~~~~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~  270 (319)
                      .+.+++..+..-+=-.|||.|+..+....... ........      |+|..+..... .-...+.+...+...--..+.
T Consensus        21 ~t~~~~~~L~~lgIktIidLr~~~e~~~~~~~~~~~gi~~~------~ip~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   93 (151)
T d1xria_          21 PDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLF------QFGIEGNKEPF-VNIPDHKIRMALKVLLDEKNH   93 (151)
T ss_dssp             CCHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEE------ECCCCCCCGGG-CCCCHHHHHHHHHHHHCGGGC
T ss_pred             CCHHHHHHHHHCCCCEEEECCCcchhhcccchhhhcCceEe------ecCcccccccc-ccccHHHHHHHHHHHhcCCCC
Confidence            35555544433344679999987764210000 00000122      33332221111 112234555544432223567


Q ss_pred             CEEEecCCcH-HHHHHH-HHHHhcCCCC
Q 020963          271 PVVTACGTGV-TACILA-LGLNRLGKHD  296 (319)
Q Consensus       271 ~vivyC~~G~-ra~~~~-~~L~~~G~~~  296 (319)
                      ||+++|..|. |+..++ .+|..+|+..
T Consensus        94 pvlvHC~~GkdRTG~v~a~~l~~~g~~~  121 (151)
T d1xria_          94 PVLIHCKRGKHRTGCLVGCLRKLQKWCL  121 (151)
T ss_dssp             SEEEECSSSSSHHHHHHHHHHHHTTBCH
T ss_pred             CEEEEcCCCchHHHHHHHHHHHHcCCCH
Confidence            9999999985 666554 4466789863

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=87.25  E-value=0.59  Score=35.75  Aligned_cols=48  Identities=17%  Similarity=0.279  Sum_probs=37.9

Q ss_pred             HHHHHHHhCCCCCCCeEEEEcCCCcchhHHHHHHHHHhcCCceEEecCCH
Q 020963           90 AFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL  139 (319)
Q Consensus        90 ~~~~~~~~~~i~~~~~vvly~~~g~~~a~~~~~~l~~~G~~~v~~l~GG~  139 (319)
                      -|.+.++..++++++.|++.+..|.  +..+...|...|+++|.+++.-.
T Consensus         4 G~~~~l~~~~~~~~~~vlIlGaGGa--arai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1           4 AIVKLIEKYHLNKNAKVIVHGSGGM--AKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             HHHHHHHHTTCCTTSCEEEECSSTT--HHHHHHHHHHTTCCCEEEECSCH
T ss_pred             HHHHHHHHcCCCCCCeEEEECCCHH--HHHHHHHHHHCCCCEEEEecccH
Confidence            4677889999988889999966443  45567788999999999998754

>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Putative phosphatase At1g05000
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.34  E-value=1.1  Score=33.32  Aligned_cols=49  Identities=10%  Similarity=0.041  Sum_probs=29.7

Q ss_pred             CHHHHHHHHHhCCCCCCCeEEEEcCCCc-chhHHHHHHHHHhcCCceEEe
Q 020963           87 SEEAFAAAVSALGLENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVL  135 (319)
Q Consensus        87 ~~~~~~~~~~~~~i~~~~~vvly~~~g~-~~a~~~~~~l~~~G~~~v~~l  135 (319)
                      ..+.+...+..+--..+.+|+++|..|. ++...++.++..+|++.-.++
T Consensus        76 ~~~~~~~~~~~~~~~~~~pvlvHC~~GkdRTG~v~a~~l~~~g~~~~~i~  125 (151)
T d1xria_          76 PDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIF  125 (151)
T ss_dssp             CHHHHHHHHHHHHCGGGCSEEEECSSSSSHHHHHHHHHHHHTTBCHHHHH
T ss_pred             cHHHHHHHHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence            3455555555443345678999998884 444455556666787643333