Citrus Sinensis ID: 020966

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MASSISYLFVTLILTIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN
ccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHcccccccccHHHHHHHHHHccccccccEEccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHccccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHccccccccHHHHHHHHHHccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEccccccccc
MASSISYLFVTLILTIISLLActsnaqlsptfyatscpnfQRIARDEMTKAVNRQPRNAASILRLFFHdcfvngcdgsvllddtatftgeknagpnrnsargFEVIDAIKTRLEAACNATVSCADILAVAARDGVallggptwtvplgrrdartasqsaansqipgpssSLATLISMFAAkgltaqdmtvlsgGHAIGFARCAAFRNriyndtnidpafattrrttcpatggdpnlapldqtpnrfdnsyyqnlvnrrgllhsdqelfnggsqdatvrgystnpasFARDFAAAMVKMgnispltgtngeirrncrvvn
MASSISYLFVTLILTIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFtgeknagpnrnsargFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTAsqsaansqipgpssSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNispltgtngeirrncrvvn
MASSISYLFVTLILTIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN
****ISYLFVTLILTIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTG**********ARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLG***********************ATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP*****************FDNSYYQNLVNRRGLLHSD**LF*****************SFARDFAAAMVKMGNI******************
******Y*FVTLILTIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP***G*PNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN
MASSISYLFVTLILTIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRD****************SSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN
***SISYLFVTLILTIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNA*PNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNC****
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASSISYLFVTLILTIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query319 2.2.26 [Sep-21-2011]
Q9FLC0324 Peroxidase 52 OS=Arabidop yes no 0.909 0.895 0.665 1e-110
P00434296 Peroxidase P7 OS=Brassica N/A no 0.918 0.989 0.645 1e-109
A7NY33321 Peroxidase 4 OS=Vitis vin no no 0.996 0.990 0.590 1e-109
P22195316 Cationic peroxidase 1 OS= N/A no 0.987 0.996 0.575 1e-103
Q9LVL1325 Peroxidase 68 OS=Arabidop no no 0.956 0.938 0.592 3e-99
A5H452321 Peroxidase 70 OS=Zea mays N/A no 0.909 0.903 0.610 1e-98
Q0D3N0314 Peroxidase 2 OS=Oryza sat no no 0.890 0.904 0.619 8e-98
A2YPX3314 Peroxidase 2 OS=Oryza sat N/A no 0.890 0.904 0.616 2e-97
Q9LVL2316 Peroxidase 67 OS=Arabidop no no 0.978 0.987 0.563 2e-95
Q02200322 Lignin-forming anionic pe N/A no 0.952 0.944 0.548 6e-92
>sp|Q9FLC0|PER52_ARATH Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1 Back     alignment and function desciption
 Score =  399 bits (1024), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/293 (66%), Positives = 231/293 (78%), Gaps = 3/293 (1%)

Query: 26  AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTA 85
           AQL+  FY+TSCPN     +  +  AVN + R  ASILRLFFHDCFVNGCDGS+LLDDT+
Sbjct: 28  AQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTS 87

Query: 86  TFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTV 145
           +FTGE+NA PNRNSARGF VID IK+ +E AC   VSCADILA+AARD V  LGGP W V
Sbjct: 88  SFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNV 147

Query: 146 PLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAF 205
            +GRRDARTASQ+AANS IP P+SSL+ LIS F+A GL+ +DM  LSG H IG +RC  F
Sbjct: 148 KVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNF 207

Query: 206 RNRIYNDTNIDPAFATTRRTTCP-ATG-GDPNLAPLD-QTPNRFDNSYYQNLVNRRGLLH 262
           R RIYN+TNI+ AFATTR+ TCP A+G GD NLAPLD  T   FDN+Y++NL+ +RGLLH
Sbjct: 208 RARIYNETNINAAFATTRQRTCPRASGSGDGNLAPLDVTTAASFDNNYFKNLMTQRGLLH 267

Query: 263 SDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNC 315
           SDQ LFNGGS D+ VRGYS NP+SF  DF AAM+KMG+ISPLTG++GEIR+ C
Sbjct: 268 SDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVC 320
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|P00434|PERP7_BRARA Peroxidase P7 OS=Brassica rapa PE=1 SV=3 Back     alignment and function description
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function description
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LVL1|PER68_ARATH Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1 Back     alignment and function description
>sp|A5H452|PER70_MAIZE Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1 Back     alignment and function description
>sp|Q0D3N0|PER2_ORYSJ Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1 Back     alignment and function description
>sp|A2YPX3|PER2_ORYSI Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2 Back     alignment and function description
>sp|Q9LVL2|PER67_ARATH Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1 Back     alignment and function description
>sp|Q02200|PERX_NICSY Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
61697137316 peroxidase [Populus alba x Populus tremu 0.971 0.981 0.821 1e-144
224128768316 predicted protein [Populus trichocarpa] 0.971 0.981 0.814 1e-143
356517328319 PREDICTED: peroxidase 4-like [Glycine ma 0.993 0.993 0.757 1e-138
5453379316 bacterial-induced peroxidase precursor [ 0.987 0.996 0.771 1e-138
225446656317 PREDICTED: peroxidase 4 [Vitis vinifera] 0.965 0.971 0.766 1e-135
225446658317 PREDICTED: peroxidase 4 [Vitis vinifera] 0.965 0.971 0.757 1e-134
356543098319 PREDICTED: peroxidase 52-like [Glycine m 0.993 0.993 0.769 1e-134
147858437317 hypothetical protein VITISV_038539 [Viti 0.965 0.971 0.760 1e-134
302143446 425 unnamed protein product [Vitis vinifera] 0.959 0.72 0.765 1e-133
357452885317 Peroxidase [Medicago truncatula] gi|3554 0.984 0.990 0.717 1e-132
>gi|61697137|gb|AAX53172.1| peroxidase [Populus alba x Populus tremula var. glandulosa] Back     alignment and taxonomy information
 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 257/313 (82%), Positives = 276/313 (88%), Gaps = 3/313 (0%)

Query: 8   LFVTLILTIISLLACT-SNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLF 66
            FVTL   I+ LLA +  +AQLS TFYA++CPN Q I R+ MT AVN QPR AASILRLF
Sbjct: 6   FFVTLC--IVPLLASSFCSAQLSATFYASTCPNLQTIVRNAMTGAVNGQPRLAASILRLF 63

Query: 67  FHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADI 126
           FHDCFVNGCDGS+LLDDTATFTGEKNA PNRNSARGFEVID IKTR+EAACNATVSCADI
Sbjct: 64  FHDCFVNGCDGSILLDDTATFTGEKNANPNRNSARGFEVIDTIKTRVEAACNATVSCADI 123

Query: 127 LAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQ 186
           LA+AARDGV LLGGP+WTVPLGRRDARTASQSAANSQIP P+SSLATLISMF+AKGL+A 
Sbjct: 124 LALAARDGVVLLGGPSWTVPLGRRDARTASQSAANSQIPSPASSLATLISMFSAKGLSAG 183

Query: 187 DMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRF 246
           DMT LSGGH IGFARC  FRNRIYNDTNID +FATTRR +CPA+GGD  LAPLD T  RF
Sbjct: 184 DMTALSGGHTIGFARCTTFRNRIYNDTNIDASFATTRRASCPASGGDATLAPLDGTQTRF 243

Query: 247 DNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTG 306
           DN+YY NLV RRGLLHSDQELFNGGSQDA VR YSTN A+FARDFAAAMV+MGNISPLTG
Sbjct: 244 DNNYYTNLVARRGLLHSDQELFNGGSQDALVRTYSTNGATFARDFAAAMVRMGNISPLTG 303

Query: 307 TNGEIRRNCRVVN 319
           TNGEIRRNCRVVN
Sbjct: 304 TNGEIRRNCRVVN 316

Source: Populus alba x Populus tremula var. glandulosa

Species: Populus alba x Populus glandulosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224128768|ref|XP_002320417.1| predicted protein [Populus trichocarpa] gi|222861190|gb|EEE98732.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356517328|ref|XP_003527340.1| PREDICTED: peroxidase 4-like [Glycine max] Back     alignment and taxonomy information
>gi|5453379|gb|AAD43561.1|AF155124_1 bacterial-induced peroxidase precursor [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|225446656|ref|XP_002281731.1| PREDICTED: peroxidase 4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446658|ref|XP_002281755.1| PREDICTED: peroxidase 4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356543098|ref|XP_003540000.1| PREDICTED: peroxidase 52-like [Glycine max] Back     alignment and taxonomy information
>gi|147858437|emb|CAN81400.1| hypothetical protein VITISV_038539 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143446|emb|CBI22007.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357452885|ref|XP_003596719.1| Peroxidase [Medicago truncatula] gi|355485767|gb|AES66970.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
TAIR|locus:2153529324 PRX52 "peroxidase 52" [Arabido 0.993 0.978 0.628 2e-102
TAIR|locus:2161193325 AT5G58400 [Arabidopsis thalian 0.965 0.947 0.589 8.1e-92
TAIR|locus:2161283316 AT5G58390 [Arabidopsis thalian 0.965 0.974 0.570 1.9e-90
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.921 0.849 0.526 2.8e-82
TAIR|locus:2012607321 AT1G14550 [Arabidopsis thalian 0.981 0.975 0.515 5.2e-81
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 1.0 0.963 0.481 5.2e-81
TAIR|locus:2012597315 PER4 "peroxidase 4" [Arabidops 0.962 0.974 0.509 6e-80
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 1.0 0.943 0.476 7.6e-80
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.978 0.931 0.5 1.6e-79
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 1.0 0.946 0.474 1.8e-78
TAIR|locus:2153529 PRX52 "peroxidase 52" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
 Identities = 205/326 (62%), Positives = 245/326 (75%)

Query:     1 MASSISYLFVTLILTIISLLACTSN----AQLSPTFYATSCPNFQRIARDEMTKAVNRQP 56
             MAS+   L   L+L +  LL   +N    AQL+  FY+TSCPN     +  +  AVN + 
Sbjct:     1 MASN--KLISILVLVVTLLLQGDNNYVVEAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEA 58

Query:    57 RNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAA 116
             R  ASILRLFFHDCFVNGCDGS+LLDDT++FTGE+NA PNRNSARGF VID IK+ +E A
Sbjct:    59 RMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKA 118

Query:   117 CNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLIS 176
             C   VSCADILA+AARD V  LGGP W V +GRRDARTASQ+AANS IP P+SSL+ LIS
Sbjct:   119 CPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLIS 178

Query:   177 MFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP-ATG-GDP 234
              F+A GL+ +DM  LSG H IG +RC  FR RIYN+TNI+ AFATTR+ TCP A+G GD 
Sbjct:   179 SFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETNINAAFATTRQRTCPRASGSGDG 238

Query:   235 NLAPLD-QTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAA 293
             NLAPLD  T   FDN+Y++NL+ +RGLLHSDQ LFNGGS D+ VRGYS NP+SF  DF A
Sbjct:   239 NLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTA 298

Query:   294 AMVKMGNISPLTGTNGEIRRNCRVVN 319
             AM+KMG+ISPLTG++GEIR+ C   N
Sbjct:   299 AMIKMGDISPLTGSSGEIRKVCGRTN 324
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005829 "cytosol" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2161193 AT5G58400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161283 AT5G58390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012607 AT1G14550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012597 PER4 "peroxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P27337PER1_HORVU1, ., 1, 1, ., 1, ., 70.54930.96860.9809N/Ano
P22195PER1_ARAHY1, ., 1, 1, ., 1, ., 70.5750.98740.9968N/Ano
P59121PERE5_ARMRU1, ., 1, 1, ., 1, ., 70.50320.91840.9575N/Ano
Q02200PERX_NICSY1, ., 1, 1, ., 1, ., 70.54870.95290.9440N/Ano
A2YPX3PER2_ORYSI1, ., 1, 1, ., 1, ., 70.61640.89020.9044N/Ano
P00434PERP7_BRARA1, ., 1, 1, ., 1, ., 70.64520.91840.9898N/Ano
Q4W1I8PER1_ZINEL1, ., 1, 1, ., 1, ., 70.50620.96230.9563N/Ano
Q9FLC0PER52_ARATH1, ., 1, 1, ., 1, ., 70.66550.90900.8950yesno
Q4W1I9PER2_ZINEL1, ., 1, 1, ., 1, ., 70.50620.96230.9563N/Ano
Q05855PER1_WHEAT1, ., 1, 1, ., 1, ., 70.57280.93410.9551N/Ano
A5H454PER66_MAIZE1, ., 1, 1, ., 1, ., 70.56010.89020.8875N/Ano
A5H453PER42_MAIZE1, ., 1, 1, ., 1, ., 70.54230.90280.8971N/Ano
A5H452PER70_MAIZE1, ., 1, 1, ., 1, ., 70.61090.90900.9034N/Ano
P15233PER1C_ARMRU1, ., 1, 1, ., 1, ., 70.51110.94350.9066N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.991
3rd Layer1.11.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_XIV000840
hypothetical protein (316 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-170
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-82
pfam00141180 pfam00141, peroxidase, Peroxidase 4e-68
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-30
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 3e-15
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 5e-10
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 8e-09
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-08
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 6e-08
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 2e-07
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  473 bits (1219), Expect = e-170
 Identities = 171/300 (57%), Positives = 201/300 (67%), Gaps = 10/300 (3%)

Query: 27  QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTAT 86
           QLS  FY+ SCPN + I R  +  AV   PR AA++LRL FHDCFV GCD SVLLD TA 
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 87  FTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVP 146
            T EK+A PN  S RGF+VID IK  LEAAC   VSCADILA+AARD V L GGP++ VP
Sbjct: 61  NTSEKDAPPNL-SLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVP 119

Query: 147 LGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFR 206
           LGRRD R  S +     +P P  S++ LIS+FA+KGLT  D+  LSG H IG A C++F 
Sbjct: 120 LGRRDGR-VSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFS 178

Query: 207 NRIYN-------DTNIDPAFATTRRTTCPATGGDPNLAPLDQ-TPNRFDNSYYQNLVNRR 258
           +R+YN       D  +DPA+A   R  CPA G D  L PLD  TPN FDNSYY+NL+  R
Sbjct: 179 DRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238

Query: 259 GLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVV 318
           GLL SDQ L +     A V  Y+ N  +F RDFAAAMVKMGNI  LTG+ GEIR+NCRVV
Sbjct: 239 GLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 319
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 100.0
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.56
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.3e-105  Score=756.58  Aligned_cols=292  Identities=46%  Similarity=0.783  Sum_probs=277.4

Q ss_pred             ccCCCCCcchhccCChhHHHHHHHHHHHHHhhCCCchhhHHHHhhhccCCCCCCccccccCCCCCccccCCCCCCCCchh
Q 020966           23 TSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARG  102 (319)
Q Consensus        23 ~~~~~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~~~g  102 (319)
                      ++.++|+++||++|||++|+||++.|++.+.++|+++|++|||+||||||+||||||||+++   .+||++++|. +++|
T Consensus        20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~G   95 (324)
T PLN03030         20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRG   95 (324)
T ss_pred             chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-Ccch
Confidence            34567999999999999999999999999999999999999999999999999999999864   3699999998 8899


Q ss_pred             HHHHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcC
Q 020966          103 FEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKG  182 (319)
Q Consensus       103 ~~~i~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G  182 (319)
                      |++|+.||+++|++||++|||||||++||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++|
T Consensus        96 f~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~G  174 (324)
T PLN03030         96 YDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKG  174 (324)
T ss_pred             HHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999999887775 89999999999999999999


Q ss_pred             CCccCceeeccCcccccccccccccccCC--------CCCCCHHHHHHhhhcCCCCCCCCCCCCCC-CCCCccCcHHHHH
Q 020966          183 LTAQDMTVLSGGHAIGFARCAAFRNRIYN--------DTNIDPAFATTRRTTCPATGGDPNLAPLD-QTPNRFDNSYYQN  253 (319)
Q Consensus       183 l~~~dlVaLsGaHTiG~~hc~~f~~Rl~~--------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D-~tp~~FDn~Yy~~  253 (319)
                      |+.+|||+||||||||++||.+|.+|+||        ||+|||.|++.|++.||..+++.+.+++| .||.+|||+||++
T Consensus       175 l~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~n  254 (324)
T PLN03030        175 LNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSN  254 (324)
T ss_pred             CCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHH
Confidence            99999999999999999999999999995        89999999999999999643333467899 9999999999999


Q ss_pred             HhhcccccccccccccCcchHHHHHHhhcCc----hhHHHHHHHHHHHhhcCCCCCCCCCcccccCccCC
Q 020966          254 LVNRRGLLHSDQELFNGGSQDATVRGYSTNP----ASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN  319 (319)
Q Consensus       254 l~~~~glL~SD~~L~~d~~t~~~V~~yA~~~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  319 (319)
                      |+.++|+|+|||+|+.|++|+++|++||.|+    +.|+++|++||+|||+|+|+||++|||||+|+++|
T Consensus       255 ll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        255 LKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            9999999999999999999999999999885    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
1sch_A294 Peanut Peroxidase Length = 294 1e-103
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 8e-82
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 7e-76
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 1e-75
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-75
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-75
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 2e-75
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 3e-75
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 3e-75
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 3e-75
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 3e-75
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 4e-75
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 1e-74
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-74
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-73
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 2e-73
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 8e-70
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 2e-68
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 6e-63
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 1e-11
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 8e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 7e-07
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 8e-07
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 8e-07
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 9e-07
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 9e-07
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 9e-07
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 9e-07
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 1e-06
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 1e-06
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 1e-06
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 1e-06
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 2e-06
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 5e-06
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 5e-06
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 2e-04
4g05_A317 The Crystal Structures Of Several Mutants Of Pleuro 3e-04
4fdq_A315 The Crystal Structures Of Several Mutants Of Pleuro 3e-04
4fcn_A319 The Crystal Structures Of Several Mutants Of Pleuro 3e-04
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 5e-04
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  370 bits (950), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/293 (60%), Positives = 215/293 (73%), Gaps = 1/293 (0%)
Query: 28  LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATF 87
           LS  FYAT CPN     +  +  AV ++ R  AS+LRL FHDCFV GCD SVLLDDT+ F
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 88  TGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPL 147
           TGEK AGPN NS RGFEVID IK+++E+ C   VSCADILAVAARD V  LGG +W V L
Sbjct: 62  TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 148 GRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRN 207
           GRRD+ TAS S+ANS +P P  +L+ LIS F+ KG T +++  LSG H IG A+C AFR 
Sbjct: 122 GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRT 181
Query: 208 RIYNDTNIDPAFATTRRTTCPATGGDPNLAPLD-QTPNRFDNSYYQNLVNRRGLLHSDQE 266
           RIYN++NIDP +A + +  CP+ GGD NL+P D  TPN+FDN+YY NL N++GLLHSDQ+
Sbjct: 182 RIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQ 241
Query: 267 LFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN 319
           LFNG S D+ V  YS N A+F  DF  AM+KMGN+SPLTGT+G+IR NCR  N
Sbjct: 242 LFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 317 Back     alignment and structure
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 Back     alignment and structure
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 319 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 0.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 0.0
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 0.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 0.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 0.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 0.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 0.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 1e-109
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 1e-77
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 1e-75
2e39_A344 Peroxidase; heme protein, coordination geometry of 1e-66
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 4e-66
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 5e-66
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 3e-65
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-18
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 5e-15
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
 Score =  542 bits (1398), Expect = 0.0
 Identities = 176/294 (59%), Positives = 216/294 (73%), Gaps = 1/294 (0%)

Query: 27  QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTAT 86
           +LS  FYAT CPN     +  +  AV ++ R  AS+LRL FHDCFV GCD SVLLDDT+ 
Sbjct: 1   ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSN 60

Query: 87  FTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVP 146
           FTGEK AGPN NS RGFEVID IK+++E+ C   VSCADILAVAARD V  LGG +W V 
Sbjct: 61  FTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVL 120

Query: 147 LGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFR 206
           LGRRD+ TAS S+ANS +P P  +L+ LIS F+ KG T +++  LSG H IG A+C AFR
Sbjct: 121 LGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFR 180

Query: 207 NRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLD-QTPNRFDNSYYQNLVNRRGLLHSDQ 265
            RIYN++NIDP +A + +  CP+ GGD NL+P D  TPN+FDN+YY NL N++GLLHSDQ
Sbjct: 181 TRIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQ 240

Query: 266 ELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN 319
           +LFNG S D+ V  YS N A+F  DF  AM+KMGN+SPLTGT+G+IR NCR  N
Sbjct: 241 QLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=7.4e-108  Score=773.27  Aligned_cols=292  Identities=50%  Similarity=0.789  Sum_probs=283.7

Q ss_pred             CCcchhccCChhHHHHHHHHHHHHHhhCCCchhhHHHHhhhccCCCCCCccccccCCCCCccccCCCCCCCCchhHHHHH
Q 020966           28 LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVID  107 (319)
Q Consensus        28 L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i~  107 (319)
                      |+++||++|||++|+|||+.|++++.++|+++|++|||+||||||+||||||||++++++++|+++++|.+++|||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999988889999999987789999999


Q ss_pred             HHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccC
Q 020966          108 AIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQD  187 (319)
Q Consensus       108 ~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  187 (319)
                      +||++||+.||++|||||||+||||+||+++|||.|+|++||+|++++...+++.+||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999998888778999999999999999999999999


Q ss_pred             ceeeccCcccccccccccccccCC-------CCCCCHHHHHHhhhcCCCCCC--CCCCCCCC-CCCCccCcHHHHHHhhc
Q 020966          188 MTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCPATGG--DPNLAPLD-QTPNRFDNSYYQNLVNR  257 (319)
Q Consensus       188 lVaLsGaHTiG~~hc~~f~~Rl~~-------dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~D-~tp~~FDn~Yy~~l~~~  257 (319)
                      |||||||||||++||.+|.+|+||       ||+|||.|++.|++.||..++  +.+.+++| .||.+|||+||++|+.+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~  241 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT  241 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHhC
Confidence            999999999999999999999985       899999999999999998655  56678899 89999999999999999


Q ss_pred             ccccccccccccCcchHHHHHHhhcCchhHHHHHHHHHHHhhcCCCCCCCCCcccccCccCC
Q 020966          258 RGLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN  319 (319)
Q Consensus       258 ~glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  319 (319)
                      +|||+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|++||
T Consensus       242 ~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             CCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            99999999999999999999999999999999999999999999999999999999999998
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 319
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-128
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-127
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-125
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-120
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-119
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-118
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 1e-69
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 1e-66
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 2e-65
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 7e-52
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 3e-45
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-43
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 4e-05
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 8e-05
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  365 bits (939), Expect = e-128
 Identities = 145/303 (47%), Positives = 184/303 (60%), Gaps = 10/303 (3%)

Query: 27  QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTAT 86
           QL+PTFY  +CPN   I    +  A    PR  AS++RL FHDCFV GCDGSVLL++T T
Sbjct: 1   QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60

Query: 87  FTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVP 146
              E++A PN NS RG +V++ IKT +E +C  TVSCADILA+AA     L GGP W VP
Sbjct: 61  IESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVP 120

Query: 147 LGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFR 206
           LGRRD+ TA+++ AN  +P P  +L  L + FA +GL   D+  LSGGH  G ARC+ F 
Sbjct: 121 LGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFI 180

Query: 207 NRIYN-------DTNIDPAFATTRRTTCPATGGDPNLAPLD-QTPNRFDNSYYQNLVNRR 258
           NR+YN       D  ++  +    R  CP      NL  LD  TP++FDN YY NL+   
Sbjct: 181 NRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN 240

Query: 259 GLLHSDQELFN--GGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCR 316
           GLL SDQELF+  G      V  +S+N  +F  +F  +M+KMGNI  LTG  GEIR  C 
Sbjct: 241 GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCN 300

Query: 317 VVN 319
            VN
Sbjct: 301 FVN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=8.7e-103  Score=739.01  Aligned_cols=293  Identities=49%  Similarity=0.850  Sum_probs=284.0

Q ss_pred             CCCcchhccCChhHHHHHHHHHHHHHhhCCCchhhHHHHhhhccCCCCCCccccccCCCCCccccCCCCCCCCchhHHHH
Q 020966           27 QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVI  106 (319)
Q Consensus        27 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i  106 (319)
                      ||+.+||++|||++|+||++.|++.+.++|+++|++|||+||||||+||||||||+++.++.+|+++++|.++++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            79999999999999999999999999999999999999999999999999999999988888999999999888999999


Q ss_pred             HHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCcc
Q 020966          107 DAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQ  186 (319)
Q Consensus       107 ~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  186 (319)
                      +.||++||..||++|||||||+||||+||+++|||.|+|++||+|+.+|...++..+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999999888777899999999999999999999999


Q ss_pred             CceeeccCcccccccccccccccCC-------CCCCCHHHHHHhhhcCCCCCCCCCCCCCC-CCCCccCcHHHHHHhhcc
Q 020966          187 DMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCPATGGDPNLAPLD-QTPNRFDNSYYQNLVNRR  258 (319)
Q Consensus       187 dlVaLsGaHTiG~~hc~~f~~Rl~~-------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D-~tp~~FDn~Yy~~l~~~~  258 (319)
                      |||||+||||||++||.+|..|+|+       ||.+++.|+..|+..||.++.+.+.+++| .||.+|||+||++++.++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~~  240 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN  240 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTTC
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhcC
Confidence            9999999999999999999999995       88999999999999999876666677788 999999999999999999


Q ss_pred             cccccccccccCc--chHHHHHHhhcCchhHHHHHHHHHHHhhcCCCCCCCCCcccccCccCC
Q 020966          259 GLLHSDQELFNGG--SQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN  319 (319)
Q Consensus       259 glL~SD~~L~~d~--~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  319 (319)
                      |+|+||++|+.||  +|+++|++||.||+.|+++|++||+||++|+||||.+||||++|+++|
T Consensus       241 glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         241 GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             CSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            9999999999996  799999999999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure