Citrus Sinensis ID: 021016

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MSESETQEQQQKPKREGDFDDFNLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILSGWFPLRLSSL
cccccHHHHHccccccccccccHHHcccHHHHHHcHHHHHHHHHHHcccccccccEEEEEEEEcccccccccEEEEEccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccEEEEEEccccEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEccccccHHHHHHHccccccccccccccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccccc
cccccccccccccccccccccccHccccccHHHHccccEEEEEccccccccccccEEEEEEccccccccHHHHHEEEccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEEccccccccccEEEEEcccccccccHHHHHHHHHcccEEEEccEEccEEEEEEccccHHHccccEcccccEEEEEEccccEEEEEEccccHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHcc
msesetqeqqqkpkregdfddfnlIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADaaedkgsrhtmeDASVVLVdassdsppnlrcaHFAIFDGHGGRLAAEYAQKRLHANVIsaglprfrktdeSLLQesvsggwqdgaTAVCIWILGRTVFVANIGDAKAVVARSsivdgsnnhldelSSLKAIVVTRVHKAIYPQERARIQksggtvssngrlqgrlevsrafgdrqfkkfgvvatpdihsfevterdhFIILgcdglwgvfgpsdAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILsgwfplrlssl
msesetqeqqqkpkregdfddfnLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSivdgsnnhldelsslkaivVTRVHKAIypqerariqksggtvssngrlqGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILsgwfplrlssl
MSESETQEQQQKPKREGDFDDFNLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEdasvvlvdassdsPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILSGWFPLRLSSL
**************************************************IDFV*********************************LRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ*********************LEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILSGWFPLR****
******************************************************EIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESV**GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTA**AFTCQSEKLVDFFMELIILSGWFPLRLSSL
****************GDFDDFNLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILSGWFPLRLSSL
************************************NEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILSGWFPLRLSSL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSESETQEQQQKPKREGDFDDFNLIAKKSKIEKVNENEEEAARxxxxxxxxxxxxxxxxxxxxxGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILSGWFPLRLSSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query318 2.2.26 [Sep-21-2011]
Q9LMT1351 Probable protein phosphat yes no 0.798 0.723 0.681 1e-101
Q0J2R1367 Probable protein phosphat yes no 0.735 0.637 0.710 1e-101
Q0IIF0370 Integrin-linked kinase-as yes no 0.779 0.670 0.346 1e-41
Q9H0C8392 Integrin-linked kinase-as yes no 0.779 0.632 0.346 4e-41
Q9Z1Z6392 Integrin-linked kinase-as yes no 0.779 0.632 0.346 6e-41
Q8R0F6392 Integrin-linked kinase-as yes no 0.779 0.632 0.346 7e-41
Q9SLA1392 Probable protein phosphat no no 0.650 0.528 0.356 1e-27
Q8LAY8354 Probable protein phosphat no no 0.632 0.567 0.364 7e-27
Q0JL75377 Probable protein phosphat no no 0.616 0.519 0.355 2e-26
Q6L5C4491 Probable protein phosphat no no 0.616 0.399 0.350 3e-26
>sp|Q9LMT1|P2C08_ARATH Probable protein phosphatase 2C 8 OS=Arabidopsis thaliana GN=At1g18030 PE=2 SV=2 Back     alignment and function desciption
 Score =  367 bits (942), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/270 (68%), Positives = 212/270 (78%), Gaps = 16/270 (5%)

Query: 35  NENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFA 94
           N   EE   + +  ++ +F+ +EAD AEDKG+RHTMED  VVL DAS D P  LRCAHFA
Sbjct: 53  NREAEEDKPSFVSEEKKEFL-VEADVAEDKGARHTMEDVWVVLPDASLDFPGTLRCAHFA 111

Query: 95  IFDGHGGRLAAEYAQKRLHANVISAGLPR---------------FRKTDESLLQESVSGG 139
           I+DGHGGRLAAE+A+K LH NV+SAGLPR               FRKTDE LLQ+SVSGG
Sbjct: 112 IYDGHGGRLAAEFAKKHLHLNVLSAGLPRELLDVKVAKKAILEGFRKTDELLLQKSVSGG 171

Query: 140 WQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI 199
           WQDGATAVC+WIL + VFVANIGDAKAV+ARSS  +   NH +  + LKAIV+TR HKAI
Sbjct: 172 WQDGATAVCVWILDQKVFVANIGDAKAVLARSSTTNELGNHTEAGNPLKAIVLTREHKAI 231

Query: 200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFII 259
           YPQER+RIQKSGG +SSNGRLQGRLEVSRAFGDR FKKFGV ATPDIH+FE+TER++F+I
Sbjct: 232 YPQERSRIQKSGGVISSNGRLQGRLEVSRAFGDRHFKKFGVSATPDIHAFELTERENFMI 291

Query: 260 LGCDGLWGVFGPSDAVEFVQKLLKVTAHFA 289
           LGCDGLW VFGPSDAV FVQKLLK   H +
Sbjct: 292 LGCDGLWEVFGPSDAVGFVQKLLKEGLHVS 321

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q0J2R1|P2C67_ORYSJ Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1 Back     alignment and function description
>sp|Q0IIF0|ILKAP_BOVIN Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1 Back     alignment and function description
>sp|Q9H0C8|ILKAP_HUMAN Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1 Back     alignment and function description
>sp|Q9Z1Z6|ILKAP_RAT Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1 Back     alignment and function description
>sp|Q8R0F6|ILKAP_MOUSE Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1 Back     alignment and function description
>sp|Q9SLA1|P2C22_ARATH Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1 Back     alignment and function description
>sp|Q8LAY8|P2C69_ARATH Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1 Back     alignment and function description
>sp|Q0JL75|P2C07_ORYSJ Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2 Back     alignment and function description
>sp|Q6L5C4|P2C52_ORYSJ Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
449497544348 PREDICTED: probable protein phosphatase 0.867 0.793 0.662 1e-108
449439101348 PREDICTED: probable protein phosphatase 0.867 0.793 0.659 1e-108
225456039378 PREDICTED: probable protein phosphatase 0.720 0.605 0.778 1e-106
357500131321 hypothetical protein MTR_6g081850 [Medic 0.858 0.850 0.649 1e-103
255558671349 protein phosphatase 2c, putative [Ricinu 0.823 0.750 0.652 1e-102
224133162266 predicted protein [Populus trichocarpa] 0.672 0.804 0.795 1e-101
357157983360 PREDICTED: probable protein phosphatase 0.726 0.641 0.719 1e-100
297844754341 hypothetical protein ARALYDRAFT_312763 [ 0.861 0.803 0.638 3e-99
18394565351 putative protein phosphatase 2C 8 [Arabi 0.798 0.723 0.681 4e-99
115478490367 Os09g0314400 [Oryza sativa Japonica Grou 0.735 0.637 0.710 4e-99
>gi|449497544|ref|XP_004160432.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/308 (66%), Positives = 237/308 (76%), Gaps = 32/308 (10%)

Query: 3   ESETQEQQQKPKREGDFDDFNLIAKKSK------------IEKVNENEEEAARAQIMHKQ 50
           E ET + + K KR  D +D ++  KK K            +E VN +EE     +++ + 
Sbjct: 10  EEETSKLEPKSKRGADVEDADVTVKKFKTQAAADETGARNLEAVNGDEE----LKVIKRD 65

Query: 51  IDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQK 110
           ++FV IEADAAEDKGSRHTMEDA V+L+DAS D P  LRCAHFAI+DGHGGRLAAE+AQK
Sbjct: 66  VEFV-IEADAAEDKGSRHTMEDAWVLLLDASLDFPGKLRCAHFAIYDGHGGRLAAEHAQK 124

Query: 111 RLHANVISAGLPR---------------FRKTDESLLQESVSGGWQDGATAVCIWILGRT 155
            L  NV+S+GLPR               FRKTDESLLQES +GGWQDGATAVC+W+LG+T
Sbjct: 125 HLQKNVLSSGLPRELLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCVWVLGQT 184

Query: 156 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS 215
           VFVAN+GDAKAVVARS   D S  + +  SSLKAIV+TR HKAIYPQERARIQK+GG V 
Sbjct: 185 VFVANVGDAKAVVARSLTTDKSTTNSNGGSSLKAIVLTREHKAIYPQERARIQKAGGVVG 244

Query: 216 SNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAV 275
           SNGRLQGRLEVSRAFGDRQFKK GV+ATPDIHSFE+T+R+HFIILGCDGLWGVFGPSDAV
Sbjct: 245 SNGRLQGRLEVSRAFGDRQFKKLGVIATPDIHSFELTDREHFIILGCDGLWGVFGPSDAV 304

Query: 276 EFVQKLLK 283
           +FVQKLLK
Sbjct: 305 DFVQKLLK 312

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449439101|ref|XP_004137326.1| PREDICTED: probable protein phosphatase 2C 8-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225456039|ref|XP_002277457.1| PREDICTED: probable protein phosphatase 2C 8 [Vitis vinifera] gi|297734261|emb|CBI15508.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357500131|ref|XP_003620354.1| hypothetical protein MTR_6g081850 [Medicago truncatula] gi|355495369|gb|AES76572.1| hypothetical protein MTR_6g081850 [Medicago truncatula] Back     alignment and taxonomy information
>gi|255558671|ref|XP_002520360.1| protein phosphatase 2c, putative [Ricinus communis] gi|223540458|gb|EEF42026.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224133162|ref|XP_002321498.1| predicted protein [Populus trichocarpa] gi|222868494|gb|EEF05625.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357157983|ref|XP_003577979.1| PREDICTED: probable protein phosphatase 2C 67-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|297844754|ref|XP_002890258.1| hypothetical protein ARALYDRAFT_312763 [Arabidopsis lyrata subsp. lyrata] gi|297336100|gb|EFH66517.1| hypothetical protein ARALYDRAFT_312763 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18394565|ref|NP_564045.1| putative protein phosphatase 2C 8 [Arabidopsis thaliana] gi|226739232|sp|Q9LMT1.2|P2C08_ARATH RecName: Full=Probable protein phosphatase 2C 8; Short=AtPP2C08 gi|109946401|gb|ABG48379.1| At1g18030 [Arabidopsis thaliana] gi|332191544|gb|AEE29665.1| putative protein phosphatase 2C 8 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|115478490|ref|NP_001062840.1| Os09g0314400 [Oryza sativa Japonica Group] gi|122228146|sp|Q0J2R1.1|P2C67_ORYSJ RecName: Full=Probable protein phosphatase 2C 67; Short=OsPP2C67 gi|113631073|dbj|BAF24754.1| Os09g0314400 [Oryza sativa Japonica Group] gi|125563183|gb|EAZ08563.1| hypothetical protein OsI_30836 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query318
TAIR|locus:2194035351 AT1G18030 [Arabidopsis thalian 0.820 0.743 0.641 9.9e-87
UNIPROTKB|F1SIU8392 ILKAP "Uncharacterized protein 0.779 0.632 0.342 1.2e-35
UNIPROTKB|Q0IIF0370 ILKAP "Integrin-linked kinase- 0.773 0.664 0.344 1.9e-35
UNIPROTKB|E1BYA9392 ILKAP "Uncharacterized protein 0.776 0.630 0.329 4e-35
UNIPROTKB|E2RS11393 ILKAP "Uncharacterized protein 0.779 0.631 0.339 6.5e-35
UNIPROTKB|Q9H0C8392 ILKAP "Integrin-linked kinase- 0.779 0.632 0.339 6.5e-35
RGD|620128392 Ilkap "integrin-linked kinase- 0.779 0.632 0.339 1.3e-34
UNIPROTKB|Q9Z1Z6392 Ilkap "Integrin-linked kinase- 0.779 0.632 0.339 1.3e-34
MGI|MGI:1914694392 Ilkap "integrin-linked kinase- 0.779 0.632 0.335 1.7e-34
UNIPROTKB|F1SJH8293 LOC100737148 "Uncharacterized 0.669 0.726 0.371 3.6e-34
TAIR|locus:2194035 AT1G18030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
 Identities = 179/279 (64%), Positives = 208/279 (74%)

Query:    35 NENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEXXXXXXXXXXXXXPPNLRCAHFA 94
             N   EE   + +  ++ +F+ +EAD AEDKG+RHTME             P  LRCAHFA
Sbjct:    53 NREAEEDKPSFVSEEKKEFL-VEADVAEDKGARHTMEDVWVVLPDASLDFPGTLRCAHFA 111

Query:    95 IFDGHGGRLAAEYAQKRLHANVISAGLPR---------------FRKTDESLLQESVSGG 139
             I+DGHGGRLAAE+A+K LH NV+SAGLPR               FRKTDE LLQ+SVSGG
Sbjct:   112 IYDGHGGRLAAEFAKKHLHLNVLSAGLPRELLDVKVAKKAILEGFRKTDELLLQKSVSGG 171

Query:   140 WQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI 199
             WQDGATAVC+WIL + VFVANIGDAKAV+ARSS  +   NH +  + LKAIV+TR HKAI
Sbjct:   172 WQDGATAVCVWILDQKVFVANIGDAKAVLARSSTTNELGNHTEAGNPLKAIVLTREHKAI 231

Query:   200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFII 259
             YPQER+RIQKSGG +SSNGRLQGRLEVSRAFGDR FKKFGV ATPDIH+FE+TER++F+I
Sbjct:   232 YPQERSRIQKSGGVISSNGRLQGRLEVSRAFGDRHFKKFGVSATPDIHAFELTERENFMI 291

Query:   260 LGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLV 298
             LGCDGLW VFGPSDAV FVQKLLK   H +    S +LV
Sbjct:   292 LGCDGLWEVFGPSDAVGFVQKLLKEGLHVSTV--SRRLV 328
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
UNIPROTKB|F1SIU8 ILKAP "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q0IIF0 ILKAP "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYA9 ILKAP "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2RS11 ILKAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H0C8 ILKAP "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|620128 Ilkap "integrin-linked kinase-associated serine/threonine phosphatase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Z1Z6 Ilkap "Integrin-linked kinase-associated serine/threonine phosphatase 2C" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1914694 Ilkap "integrin-linked kinase-associated serine/threonine phosphatase 2C" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJH8 LOC100737148 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LMT1P2C08_ARATH3, ., 1, ., 3, ., 1, 60.68140.79870.7236yesno
Q0J2R1P2C67_ORYSJ3, ., 1, ., 3, ., 1, 60.71080.73580.6376yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00017748001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (378 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 2e-55
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-48
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 5e-48
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-34
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 2e-26
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-19
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  180 bits (459), Expect = 2e-55
 Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 39/240 (16%)

Query: 61  AEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG 120
           ++  G R T EDA V+  +       N     F +FDGHGG  A E+A K L   ++   
Sbjct: 6   SDKGGDRKTNEDAVVIKPNL-----NNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 121 LPR---------------FRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGD 163
                             F + DE +L+E+       + G TAV   I G  ++VAN+GD
Sbjct: 61  EETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGD 120

Query: 164 AKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGR 223
           ++AV+ R+                +A+ +T+ HK +  +ER RI+K+GG VS NGR+ G 
Sbjct: 121 SRAVLCRNG---------------EAVQLTKDHKPVNEEERERIEKAGGRVS-NGRVPGV 164

Query: 224 LEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLK 283
           L V+RA GD   K  GV A PD+   ++TE D F+IL  DGLW V    +AV+ V+  L 
Sbjct: 165 LAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELA 223

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 318
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.81
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.8
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.8
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.74
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.29
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 98.95
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 96.46
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=6.3e-60  Score=412.74  Aligned_cols=247  Identities=33%  Similarity=0.526  Sum_probs=220.5

Q ss_pred             HhhcccccccchhhHHHhhhHhhhhccccceeeeeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChH
Q 021016           24 LIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRL  103 (318)
Q Consensus        24 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~  103 (318)
                      .||+||+|+|.+..|.||+++|+             ++||||||..|||++.+.......   -..|+||+|||||.|+.
T Consensus         3 aFLdKPkteKhn~~G~GNglryg-------------~SSMQGWR~eMEDah~A~~~l~~~---l~dWSfFAVfDGHAGs~   66 (379)
T KOG0697|consen    3 AFLDKPKTEKHNAEGEGNGLRYG-------------VSSMQGWRVEMEDAHTAVAGLPSP---LEDWSFFAVFDGHAGSQ   66 (379)
T ss_pred             ccccCcccccccccCcCCceeee-------------eccccchhhhhhhhhhhhhcCCCC---ccCceEEEEEcCccchH
Confidence            37999999999999999999776             899999999999999987654322   23699999999999999


Q ss_pred             HHHHHHHHHHHHHHHccc------------------hhHHHhhHHHHHh--hhcCCCCCCCceEEEEEeCCeEEEEEeCC
Q 021016          104 AAEYAQKRLHANVISAGL------------------PRFRKTDESLLQE--SVSGGWQDGATAVCIWILGRTVFVANIGD  163 (318)
Q Consensus       104 as~~a~~~l~~~l~~~~~------------------~~f~~~d~~~~~~--~~~~~~~~GsTa~~~~i~~~~l~vanvGD  163 (318)
                      +|.+|+++|.+.++....                  ..|+.+|+.+...  ..+...++||||+++++.+.++|++|+||
T Consensus        67 va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGD  146 (379)
T KOG0697|consen   67 VANHCAEHLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGD  146 (379)
T ss_pred             HHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCc
Confidence            999999999998875411                  0188888877643  34556779999999999999999999999


Q ss_pred             ceeEEEeccccCCCCCCccccccceeEEeCcCCCCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCC-----
Q 021016          164 AKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF-----  238 (318)
Q Consensus       164 SRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~-----  238 (318)
                      ||++++|++               .++.-|.||+|.+|.|++||+.+||.|+. .|++|.|+|||||||++||..     
T Consensus       147 SRavl~rng---------------~~~f~TqDHKP~~p~EkeRIqnAGGSVMI-qRvNGsLAVSRAlGDydyK~v~~kgp  210 (379)
T KOG0697|consen  147 SRAVLCRNG---------------EVVFSTQDHKPYLPKEKERIQNAGGSVMI-QRVNGSLAVSRALGDYDYKNVPGKGP  210 (379)
T ss_pred             chhheecCC---------------ceEEeccCCCCCChHHHHHHhcCCCeEEE-EEecceeeeehhccCcccccCCCCCc
Confidence            999999999               99999999999999999999999999996 699999999999999999964     


Q ss_pred             ---CeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016          239 ---GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMEL  304 (318)
Q Consensus       239 ---~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~  304 (318)
                         -|+++|+|..+.....|+||||||||+||+|+++|++++|++++....++..  +|..+++.+|-.
T Consensus       211 ~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~--vcn~VvDtCLhK  277 (379)
T KOG0697|consen  211 TEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEE--VCNDVVDTCLHK  277 (379)
T ss_pred             hhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHH--HHHHHHHHHHhc
Confidence               2899999999999998899999999999999999999999999999999999  669999998764

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 4e-23
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 6e-21
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 6e-21
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 3e-17
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 4e-15
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-15
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 7e-15
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 8e-15
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 9e-12
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-11
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-11
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-11
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 3e-11
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 3e-11
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 3e-11
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 3e-11
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 2e-10
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 2e-06
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-05
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 1e-05
3d8k_A377 Crsytal Structure Of A Phosphatase From A Toxoplasm 8e-04
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 105/227 (46%), Gaps = 50/227 (22%)
Query: 89  RCAHFAIFDGHGGRLAAEYAQKRLHA---NVISAGLPRFRKT--------DESLLQESV- 136
           +C+ FA++DGHGG   A+Y    L      V + G   F K         D +LLQE V 
Sbjct: 50  QCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVI 109
Query: 137 ------SG---------GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHL 181
                 SG         G   G TAV   + G+ ++VAN GD++ VV R+          
Sbjct: 110 EELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG--------- 160
Query: 182 DELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK----- 236
                 KA+ ++  HK     E  RI+K+GG V+ +GR+ G L +SRA GD  +K     
Sbjct: 161 ------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSL 214
Query: 237 ---KFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
              +  + A PDI    V   D F++L CDG+W        V+FVQ+
Sbjct: 215 PAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQE 261
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma Gondii Length = 377 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query318
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-67
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 8e-65
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-63
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 3e-63
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 7e-63
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-61
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 2e-61
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-56
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-45
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-44
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 7e-40
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-33
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-30
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-05
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
 Score =  211 bits (539), Expect = 5e-67
 Identities = 79/276 (28%), Positives = 117/276 (42%), Gaps = 57/276 (20%)

Query: 60  AAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANV--- 116
           ++  +G R + EDA   +++          C+ FA++DGHGG   A+Y    L   +   
Sbjct: 27  SSSMQGWRISQEDAHNCILNFDDQ------CSFFAVYDGHGGAEVAQYCSLHLPTFLKTV 80

Query: 117 -------ISAGLPR-FRKTDESLLQESV----------------SGGWQDGATAVCIWIL 152
                      L   F   D +LLQE V                  G   G TAV   + 
Sbjct: 81  EAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLH 140

Query: 153 GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGG 212
           G+ ++VAN GD++ VV R    +G           KA+ ++  HK     E  RI+K+GG
Sbjct: 141 GKDLYVANAGDSRCVVCR----NG-----------KALEMSFDHKPEDTVEYQRIEKAGG 185

Query: 213 TVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILGCDG 264
            V+ +GR+ G L +SRA GD  +K           + A PDI    V   D F++L CDG
Sbjct: 186 RVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDG 245

Query: 265 LWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDF 300
           +W        V+FVQ+ +            E+L D 
Sbjct: 246 IWNFMTSEQVVQFVQERINKPGMKLSKI-CEELFDH 280
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 99.97
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.68
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.65
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.39
3f79_A255 Probable two-component response regulator; adaptor 99.31
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 98.67
3eq2_A394 Probable two-component response regulator; adaptor 97.09
2krx_A94 ASL3597 protein; structural genomics, PSI-2, prote 85.65
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
Probab=100.00  E-value=1.4e-49  Score=368.05  Aligned_cols=244  Identities=32%  Similarity=0.533  Sum_probs=204.8

Q ss_pred             HhhcccccccchhhHHHhhhHhhhhccccceeeeeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChH
Q 021016           24 LIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRL  103 (318)
Q Consensus        24 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~  103 (318)
                      .++.+|.++|.+..+..             ..+.+++++++|+|+.|||++++..+.      +....+|+|||||||+.
T Consensus         4 ~~l~~p~~~~~~~~~~~-------------~~~~~~~~s~~G~R~~nED~~~~~~~~------~~~~~l~~V~DGhGG~~   64 (304)
T 2i0o_A            4 AYLSEPLTTKDSSDESN-------------EFLASGSSSMQGWRISQEDAHNCILNF------DDQCSFFAVYDGHGGAE   64 (304)
T ss_dssp             GGTTCCCEEEEEEEEEC-------------SSEEEEEEEEEESSSCCCEEEEEEEEE------ETTEEEEEEEECSSCSH
T ss_pred             cccCCCcccccccccCC-------------CceEEEEeecCCCCCCccCEEEEEecc------CCCeEEEEEEcCCCCHH
Confidence            36788888876555432             346788999999999999999886432      12458999999999999


Q ss_pred             HHHHHHHHHHHHHHHcc-----------chhHHHhhHHHHHhh----------------hcCCCCCCCceEEEEEeCCeE
Q 021016          104 AAEYAQKRLHANVISAG-----------LPRFRKTDESLLQES----------------VSGGWQDGATAVCIWILGRTV  156 (318)
Q Consensus       104 as~~a~~~l~~~l~~~~-----------~~~f~~~d~~~~~~~----------------~~~~~~~GsTa~~~~i~~~~l  156 (318)
                      +|++|++++++.|.+..           ...|..+++.+.+..                ......+|||++++++.++++
T Consensus        65 ~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l  144 (304)
T 2i0o_A           65 VAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDL  144 (304)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEE
T ss_pred             HHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEE
Confidence            99999999998886542           112666666654321                112456899999999999999


Q ss_pred             EEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCCCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCC
Q 021016          157 FVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK  236 (318)
Q Consensus       157 ~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k  236 (318)
                      |+|||||||+|++|++               ++++||+||++.++.|+.||..+||.+...+|++|.+++||||||..+|
T Consensus       145 ~vanvGDSRa~l~r~g---------------~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~~~k  209 (304)
T 2i0o_A          145 YVANAGDSRCVVCRNG---------------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYK  209 (304)
T ss_dssp             EEEEESSCEEEEEETT---------------EEEECCCCCCTTSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECGGGC
T ss_pred             EEEEccCcEEEEEECC---------------EEEEcCCCcCCcCHHHHHHHHhCCCEEEeCCeEcCceeccccccCHHHc
Confidence            9999999999999998               9999999999999999999999999998788999999999999999887


Q ss_pred             C--------CCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHHHHHHHh-cCCcchhhHHHHHHHHHHH
Q 021016          237 K--------FGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKV-TAHFAFTCQSEKLVDFFME  303 (318)
Q Consensus       237 ~--------~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~-~~~~~~~~~a~~Lv~~A~~  303 (318)
                      .        .+|+++|++..+++.++|.|||||||||||+|+++|+++++++.+.. ..+++.  +|++|++.|++
T Consensus       210 ~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~--~a~~L~~~a~~  283 (304)
T 2i0o_A          210 MNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSK--ICEELFDHCLA  283 (304)
T ss_dssp             CCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHH--HHHHHHHHHC-
T ss_pred             cCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHH--HHHHHHHHHHH
Confidence            5        35789999999999999989999999999999999999999887655 556777  78999999875
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 318
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-27
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 5e-10
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (264), Expect = 2e-27
 Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 50/269 (18%)

Query: 60  AAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISA 119
            +  +G R  MEDA   ++   S        + FA++DGH G   A+Y  + L  ++ + 
Sbjct: 25  LSSMQGWRVEMEDAHTAVIGLPSGLE---SWSFFAVYDGHAGSQVAKYCCEHLLDHITNN 81

Query: 120 GLPRFRKTDESL--------------------LQESVSGGWQDGATAVCIWILGRTVFVA 159
              +      S+                    + E   G  + G+TAV + I  +  +  
Sbjct: 82  QDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFI 141

Query: 160 NIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGR 219
           N GD++ ++ R+  V                  T+ HK   P E+ RIQ +GG+V    R
Sbjct: 142 NCGDSRGLLCRNRKV---------------HFFTQDHKPSNPLEKERIQNAGGSV-MIQR 185

Query: 220 LQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVT-ERDHFIILGCDGLWGVFG 270
           + G L VSRA GD  +K           V   P++H  E + E D FIIL CDG+W V G
Sbjct: 186 VNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMG 245

Query: 271 PSDAVEFVQKLLKVTAHFAFTCQSEKLVD 299
             +  +FV+  L+VT      C   ++VD
Sbjct: 246 NEELCDFVRSRLEVTDDLEKVCN--EVVD 272
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query318
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-53  Score=389.28  Aligned_cols=245  Identities=32%  Similarity=0.509  Sum_probs=210.8

Q ss_pred             hhcccccccchhhHHHhhhHhhhhccccceeeeeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHH
Q 021016           25 IAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLA  104 (318)
Q Consensus        25 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~a  104 (318)
                      +|++|+++|.++.+.++++             ++|+++++|+|++|||++++..+..   .....+.||||||||||+.+
T Consensus         3 ~l~~p~~~k~~~~~~~~~~-------------~~g~~s~~G~R~~~ED~~~~~~~~~---~~~~~~~lf~V~DGhGG~~~   66 (295)
T d1a6qa2           3 FLDKPKMEKHNAQGQGNGL-------------RYGLSSMQGWRVEMEDAHTAVIGLP---SGLESWSFFAVYDGHAGSQV   66 (295)
T ss_dssp             CCSSCEEEEEEEEEEETTE-------------EEEEEEEEETSSSCCEEEEEEEEET---TTEEEEEEEEEEEEESCSHH
T ss_pred             CCCCCCcccCcccccCCce-------------EEEEEeCccCCCcccCeeEEEcccC---CCCCceEEEEEEeCCCChHH
Confidence            6899999999888877665             5669999999999999999876531   12245789999999999999


Q ss_pred             HHHHHHHHHHHHHHccc------------------hhHHHhhHHHHHh--hhcCCCCCCCceEEEEEeCCeEEEEEeCCc
Q 021016          105 AEYAQKRLHANVISAGL------------------PRFRKTDESLLQE--SVSGGWQDGATAVCIWILGRTVFVANIGDA  164 (318)
Q Consensus       105 s~~a~~~l~~~l~~~~~------------------~~f~~~d~~~~~~--~~~~~~~~GsTa~~~~i~~~~l~vanvGDS  164 (318)
                      |+++++++++.|.+...                  ..|..+++.+...  .......+|||++++++.++++|+||+|||
T Consensus        67 s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDS  146 (295)
T d1a6qa2          67 AKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDS  146 (295)
T ss_dssp             HHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSC
T ss_pred             HHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCC
Confidence            99999999998865421                  1155566655432  234456789999999999999999999999


Q ss_pred             eeEEEeccccCCCCCCccccccceeEEeCcCCCCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCC------
Q 021016          165 KAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF------  238 (318)
Q Consensus       165 Ra~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~------  238 (318)
                      |+|+++++               .+++||.||+|.++.|+.||..+||.+. ..|++|.+++||||||+.+|..      
T Consensus       147 R~~l~~~~---------------~~~~lT~dH~~~~~~E~~Ri~~~gg~v~-~~r~~g~l~~tRa~Gd~~~k~~~~~~~~  210 (295)
T d1a6qa2         147 RGLLCRNR---------------KVHFFTQDHKPSNPLEKERIQNAGGSVM-IQRVNGSLAVSRALGDFDYKCVHGKGPT  210 (295)
T ss_dssp             EEEEEETT---------------EEEEECCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGG
T ss_pred             eEEEeecc---------------cceeeccccCcccHHHHhhHhhcCCccc-ccccCCceeeeeccCcHHhhhccccCcc
Confidence            99999999               9999999999999999999999999996 5799999999999999999864      


Q ss_pred             --CeeeeceEEEEEeC-CCCeEEEEEcCCccCccChHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHH
Q 021016          239 --GVVATPDIHSFEVT-ERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFME  303 (318)
Q Consensus       239 --~v~~~Pdv~~~~l~-~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~  303 (318)
                        .++++|+|..+++. ++|+|||||||||||+|+++|++++|++.+....+++.  +|++|+++|++
T Consensus       211 ~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~--~a~~Lv~~A~~  276 (295)
T d1a6qa2         211 EQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEK--VCNEVVDTCLY  276 (295)
T ss_dssp             GSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHH--HHHHHHHHHHH
T ss_pred             cccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHH--HHHHHHHHHHh
Confidence              38999999999986 56779999999999999999999999988887788888  88999999986
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure