Citrus Sinensis ID: 021089

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
Protein Sequence
MHNPQNESRRRKRIISFLQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQMLRVTLCLI
Secondary Structure (PSIPRED)
cccccHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcccEEEEHHHHHHHHccccccccEEEEEccccccccccccccccccccEEEEcHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccHccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccEEccHHHHHHHHHccccccEEEEcccccHHHHEEcccccccccHHHHEcHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccEEEcccccHHHHHccccccccccHHHHHEEEEEEEcc
Coil and Loop (DISEMBL)
mhnpqnesRRRKRIISFLqnhssfspkikmmpsrtltpsaLKNSILLFSFLLIIYLFFyypslhapprllsshvvtanpltrRHLLFSIAssssswprrrSYVRlwyspnstrALTFLdraadsssagdpslprivisadtskfpftfpkgLRSAVRVARVVKEAVdltdekagvrwfvfgdddtvFFVDNLVKTLskydddrwfyvgsnsegyeqnakhsfgmafggggfAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVElgvgltpepgfhqfRCMKAINFFQisfhcreplrhggevQMLRVTLCLI
Flexible Loop (DISEMBL)
mhnpqnesrrrKRIISFlqnhssfspkikmmpSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSiassssswprrrSYVRLWYSPNSTRALTFLDRAAdsssagdpslprIVISadtskfpftfpkglrsaVRVARVVKEavdltdekagvrwfvfgdddtvFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPlrhggevqMLRVTLCLI
Low Complexity Region (SEG)
MHNPQNESRRRKRIISFLQNHSSFSPKIKMMPSRTLTPSALKNsillfsflliiylffyypslHAPPRLLSSHVVTANPLTRRHLLFsiassssswprrrsyvrLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLrsavrvarvvkeavDLTDEKAGVRWfvfgdddtvffvdNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSfgmafggggfaISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQMLRVTLCLI
Disordered region (IsUnstruct)
***************************************ALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFL***************RIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQMLRVTLCL*
Disordered Region (DISOPRED)
*****************LQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPS*********************HLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQMLRVTLCLI
Disordered Region (DISEMBL)
**********RKRIISFLQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDR*********PSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQMLRVTLCLI
Disordered Region (DISPRO)
**************ISFLQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHA*************PLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQMLRVTLCLI
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHNPQNESRRRKRIISFLQNHSSFSPKIKMMPSRTLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQMLRVTLCLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
297800668	488	hypothetical protein ARALYDRAFT_493365 [	0.854	0.555	0.582	5e-83
449453676	487	PREDICTED: uncharacterized protein LOC10	0.753	0.490	0.629	3e-82
356544838	492	PREDICTED: uncharacterized protein LOC10	0.640	0.412	0.692	4e-79
255549339	308	transferase, transferring glycosyl group	0.760	0.782	0.663	6e-79
30683185	488	uncharacterized protein [Arabidopsis tha	0.854	0.555	0.589	4e-77
2244882	520	hypothetical protein [Arabidopsis thalia	0.851	0.519	0.591	4e-77
147842358	1587	hypothetical protein VITISV_043112 [Viti	0.760	0.151	0.604	2e-73
359485673	455	PREDICTED: uncharacterized protein LOC10	0.760	0.529	0.604	9e-73
224132986	479	predicted protein [Populus trichocarpa]	0.684	0.453	0.637	2e-69
255549331	476	transferase, transferring glycosyl group	0.769	0.512	0.539	4e-65

>gi|297800668|ref|XP_002868218.1| hypothetical protein ARALYDRAFT_493365 [Arabidopsis lyrata subsp. lyrata] gi|297314054|gb|EFH44477.1| hypothetical protein ARALYDRAFT_493365 [Arabidopsis lyrata subsp. lyrata]

 Score =  313 bits (803), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 163/280 (58%), Positives = 204/280 (72%), Gaps = 9/280 (3%)

Query: 6   NESRRRKRIISFLQNHSSFSPKIKMMPSRT--LTPSALKNSILLFSFLLIIYLFFYYPSL 63
           N++RR++R    L    S SP++ + P+++  LT S ++   LL +F  IIY+ F Y + 
Sbjct: 2   NQTRRKRRPDPSLSRLDSLSPEM-LFPAKSPSLTSSRIRYIFLLLTFCFIIYIIFSYGTT 60

Query: 64  HAPPRLLS-SHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAA 122
               ++ S +  ++     RRHLLFSIA+S  SW RR SYVRLWYSP STRA+ FLDR  
Sbjct: 61  FRREQISSIARSLSVFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPESTRAVVFLDRGG 120

Query: 123 DSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGD 182
             S   D +LP +++S D S+FP+ FP GLRSA+RVARVVKE VDL D+   VRWFVFGD
Sbjct: 121 LES---DLTLPPVIVSKDVSRFPYNFPGGLRSAIRVARVVKETVDLGDKD--VRWFVFGD 175

Query: 183 DDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLA 242
           DDTVFFVDNLV  LSKYD  +W+YVGSNSE Y+QN ++SF MAFGGGGFAIS SLA+VLA
Sbjct: 176 DDTVFFVDNLVTVLSKYDHRKWYYVGSNSEFYDQNVRYSFDMAFGGGGFAISASLAKVLA 235

Query: 243 GALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQF 282
             LDSCLMRY+H+YGSD+R+FSC+ ELGV LT EPGFHQ 
Sbjct: 236 KVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQI 275

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453676|ref|XP_004144582.1| PREDICTED: uncharacterized protein LOC101222721 [Cucumis sativus] gi|449493205|ref|XP_004159221.1| PREDICTED: uncharacterized protein LOC101223399 [Cucumis sativus]

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 153/243 (62%), Positives = 186/243 (76%), Gaps = 4/243 (1%)

Query: 39  SALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSSSWPR 98
           S  K  +LL S   I+Y  F+  +  +    L     T +P TRRH++F+IASSS+SW R
Sbjct: 36  STAKTLLLLLSAAFIVYTLFF--NSSSHSPSLLCSSSTLSPTTRRHIVFAIASSSNSWSR 93

Query: 99  RRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRV 158
           R+ YVRLWY  NSTRA  F+DR A   ++ DPS+P +++S DTS+FP+TF  GLRSA+RV
Sbjct: 94  RKPYVRLWYDRNSTRAFAFVDRIAPDFASADPSVPPVIVSNDTSRFPYTFRGGLRSAIRV 153

Query: 159 ARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNA 218
           ARVVKE V+  ++   VRW+VFGDDDT+FFV+NLV TL KYD +RW+Y+GSNSE Y QN 
Sbjct: 154 ARVVKEIVERNEQD--VRWYVFGDDDTLFFVENLVNTLGKYDHERWYYIGSNSESYGQNL 211

Query: 219 KHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPG 278
           K+SF MAFGGGGFAISHSLARVLAG LDSCL RY HLYGSDAR++SCLVELGVGLT EPG
Sbjct: 212 KNSFDMAFGGGGFAISHSLARVLAGVLDSCLTRYGHLYGSDARIWSCLVELGVGLTHEPG 271

Query: 279 FHQ 281
           FHQ
Sbjct: 272 FHQ 274

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544838|ref|XP_003540854.1| PREDICTED: uncharacterized protein LOC100813277 [Glycine max]

 Score =  301 bits (770), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 142/205 (69%), Positives = 167/205 (81%), Gaps = 2/205 (0%)

Query: 78  NPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVI 137
           +P TRRHLLFS+ASSS+SWPRR  Y+ LWYSP +TRAL FLD+   ++++ D S P +VI
Sbjct: 81  SPTTRRHLLFSVASSSTSWPRRLPYINLWYSPATTRALAFLDKTPPNATSADDSSPPLVI 140

Query: 138 SADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLS 197
           S DTS FP+TF  GLRSA+RVAR VKEAVD  +    VRWFVFGDDDTVFFVDN+V+ L+
Sbjct: 141 SGDTSSFPYTFRGGLRSAIRVARAVKEAVDRNE--TDVRWFVFGDDDTVFFVDNVVRALA 198

Query: 198 KYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYG 257
           +YD  +WFYVGSNSE YEQN K+SF MAFGGGGFAIS+SLARVLA  LDSCL RY HLYG
Sbjct: 199 RYDHSKWFYVGSNSESYEQNVKYSFEMAFGGGGFAISYSLARVLARVLDSCLRRYGHLYG 258

Query: 258 SDARVFSCLVELGVGLTPEPGFHQF 282
           SD+R++SC+ ELGV LT EPGFHQ 
Sbjct: 259 SDSRIYSCIAELGVALTHEPGFHQL 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549339|ref|XP_002515723.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223545160|gb|EEF46670.1| transferase, transferring glycosyl groups, putative [Ricinus communis]

 Score =  300 bits (768), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 164/247 (66%), Positives = 195/247 (78%), Gaps = 6/247 (2%)

Query: 35  TLTPSALKNSILLFSFLLIIYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIASSSS 94
           +L PS LK+ +L+ SFL+I++L F+ PS   PP L  + +  + P TR HLLFSIASSSS
Sbjct: 34  SLAPSRLKDLLLVLSFLIILHLIFHSPS---PPSLSRAFIPISTPTTRHHLLFSIASSSS 90

Query: 95  SWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRS 154
           S+ RR  Y+RLWY+PNSTRA  FLD    SS + DP+LP ++IS DTS+FP+TF  GLRS
Sbjct: 91  SFTRREPYLRLWYNPNSTRAFAFLD-VNTSSLSVDPTLPPVIISKDTSRFPYTFKGGLRS 149

Query: 155 AVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGY 214
           A+RVARVVKEAVD       +RWFVFGDDDTVFFVD+LVKTLS YD ++W+Y+GSNSE Y
Sbjct: 150 AIRVARVVKEAVD--KNVPDIRWFVFGDDDTVFFVDSLVKTLSFYDHNKWYYIGSNSESY 207

Query: 215 EQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLT 274
           EQN K+SF M FGGGGF IS+SLA+VLA  LDSCL+RY HLYGSDARVFSCL ELGVGLT
Sbjct: 208 EQNMKYSFDMGFGGGGFVISYSLAKVLARVLDSCLVRYGHLYGSDARVFSCLAELGVGLT 267

Query: 275 PEPGFHQ 281
            EPGFHQ
Sbjct: 268 HEPGFHQ 274

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30683185|ref|NP_193259.2| uncharacterized protein [Arabidopsis thaliana] gi|332658175|gb|AEE83575.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  294 bits (752), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 165/280 (58%), Positives = 204/280 (72%), Gaps = 9/280 (3%)

Query: 6   NESRRRKRIISFLQNHSSFSPKIKMMPSRT--LTPSALKNSILLFSFLLIIYLFFYYPSL 63
           N++RR++R  S L    S SP++ + P+++  LT S ++N  LL  F  IIY+ F Y + 
Sbjct: 2   NQTRRKRRPDSSLSRLDSLSPEM-LFPAKSPSLTSSRIRNIFLLLIFCFIIYIIFSYGTN 60

Query: 64  HAPPRLLS-SHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAA 122
               ++ S +  ++     RRHLLFSIA+S  SW RR SYVRLWYSP STRA+ FLDR  
Sbjct: 61  FRREQISSIARSLSVFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPESTRAVVFLDRGG 120

Query: 123 DSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGD 182
             S   D +LP +++S D S+FP+ FP GLRSA+RVARVVKE VD  D+   VRWFVFGD
Sbjct: 121 LES---DLTLPPVIVSKDVSRFPYNFPGGLRSAIRVARVVKETVDRGDKD--VRWFVFGD 175

Query: 183 DDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLA 242
           DDTVFFVDNLV  LSKYD  +WFYVGSNSE Y+QN ++SF MAFGGGGFAIS SLA+VLA
Sbjct: 176 DDTVFFVDNLVTVLSKYDHRKWFYVGSNSEFYDQNVRYSFDMAFGGGGFAISASLAKVLA 235

Query: 243 GALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQF 282
             LDSCLMRY+H+YGSD+R+FSC+ ELGV LT EPGFHQ 
Sbjct: 236 KVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQI 275

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2244882|emb|CAB10303.1| hypothetical protein [Arabidopsis thaliana] gi|7268271|emb|CAB78566.1| hypothetical protein [Arabidopsis thaliana]

 Score =  294 bits (752), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 165/279 (59%), Positives = 204/279 (73%), Gaps = 9/279 (3%)

Query: 6   NESRRRKRIISFLQNHSSFSPKIKMMPSRT--LTPSALKNSILLFSFLLIIYLFFYYPSL 63
           N++RR++R  S L    S SP++ + P+++  LT S ++N  LL  F  IIY+ F Y + 
Sbjct: 2   NQTRRKRRPDSSLSRLDSLSPEM-LFPAKSPSLTSSRIRNIFLLLIFCFIIYIIFSYGTN 60

Query: 64  HAPPRLLS-SHVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAA 122
               ++ S +  ++     RRHLLFSIA+S  SW RR SYVRLWYSP STRA+ FLDR  
Sbjct: 61  FRREQISSIARSLSVFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPESTRAVVFLDRGG 120

Query: 123 DSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGD 182
             S   D +LP +++S D S+FP+ FP GLRSA+RVARVVKE VD  D+   VRWFVFGD
Sbjct: 121 LES---DLTLPPVIVSKDVSRFPYNFPGGLRSAIRVARVVKETVDRGDKD--VRWFVFGD 175

Query: 183 DDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLA 242
           DDTVFFVDNLV  LSKYD  +WFYVGSNSE Y+QN ++SF MAFGGGGFAIS SLA+VLA
Sbjct: 176 DDTVFFVDNLVTVLSKYDHRKWFYVGSNSEFYDQNVRYSFDMAFGGGGFAISASLAKVLA 235

Query: 243 GALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQ 281
             LDSCLMRY+H+YGSD+R+FSC+ ELGV LT EPGFHQ
Sbjct: 236 KVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQ 274

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147842358|emb|CAN76207.1| hypothetical protein VITISV_043112 [Vitis vinifera]

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/248 (60%), Positives = 179/248 (72%), Gaps = 7/248 (2%)

Query: 55  YLFFYYPSLHAPPRLLSS-HVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTR 113
           YL  + P  + P  LLS+ H     P +  HLLFSIASS+ S  RR  Y+RLW   NS R
Sbjct: 19  YLLLHVPPPYLPQSLLSTPHEAAPLPTSSHHLLFSIASSAGSLGRRAPYLRLW--SNSAR 76

Query: 114 ALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKA 173
           A+ FLD       +   +LP IV+S DTS+FP+TF +GL SAVRVAR++KEAVD  +  +
Sbjct: 77  AILFLDSPPPPDPSF-AALPPIVLSGDTSRFPYTFRRGLPSAVRVARIIKEAVDRNE--S 133

Query: 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAI 233
            +RWFVFGDDDTVFFVDNLV+TLSKYD D+WFY+GS+SE YEQN  +SF MAFGGGGFA+
Sbjct: 134 DIRWFVFGDDDTVFFVDNLVRTLSKYDHDQWFYIGSSSESYEQNESNSFDMAFGGGGFAL 193

Query: 234 SHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQI 293
           SHSLAR LAG  DSCLMRY HL+GSDAR+FSCL ELGVGLT EPGFHQ   ++   F  +
Sbjct: 194 SHSLARALAGVFDSCLMRYPHLFGSDARIFSCLAELGVGLTHEPGFHQVD-IRGNLFGML 252

Query: 294 SFHCREPL 301
           S H   PL
Sbjct: 253 SAHPLSPL 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485673|ref|XP_002274405.2| PREDICTED: uncharacterized protein LOC100246569 [Vitis vinifera]

 Score =  280 bits (715), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 150/248 (60%), Positives = 179/248 (72%), Gaps = 7/248 (2%)

Query: 55  YLFFYYPSLHAPPRLLSS-HVVTANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTR 113
           YL  + P  + P  LLS+ H     P +  HLLFSIASS+ S  RR  Y+RLW   NS R
Sbjct: 19  YLLLHVPPPYLPQSLLSTPHEAAPLPTSSHHLLFSIASSAGSLGRRAPYLRLW--SNSAR 76

Query: 114 ALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKA 173
           A+ FLD       +   +LP IV+S DTS+FP+TF +GL SAVRVAR++KEAVD  +  +
Sbjct: 77  AILFLDSPPPPDPSF-AALPPIVLSGDTSRFPYTFRRGLPSAVRVARIIKEAVDRNE--S 133

Query: 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAI 233
            +RWFVFGDDDTVFFVDNLV+TLSKYD D+WFY+GS+SE YEQN  +SF MAFGGGGFA+
Sbjct: 134 DIRWFVFGDDDTVFFVDNLVRTLSKYDHDQWFYIGSSSESYEQNESNSFDMAFGGGGFAL 193

Query: 234 SHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQI 293
           SHSLAR LAG  DSCLMRY HL+GSDAR+FSCL ELGVGLT EPGFHQ   ++   F  +
Sbjct: 194 SHSLARALAGVFDSCLMRYPHLFGSDARIFSCLAELGVGLTHEPGFHQVD-IRGNLFGML 252

Query: 294 SFHCREPL 301
           S H   PL
Sbjct: 253 SAHPLSPL 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132986|ref|XP_002327928.1| predicted protein [Populus trichocarpa] gi|222837337|gb|EEE75716.1| predicted protein [Populus trichocarpa]

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/226 (63%), Positives = 172/226 (76%), Gaps = 9/226 (3%)

Query: 82  RRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAA------DSSSAGDPSLPRI 135
           RRH++FSIASSS+S+  R+ Y+RLWY+P +TRA  FLDR        ++ S  DP+LP +
Sbjct: 62  RRHIVFSIASSSTSFIHRQPYIRLWYNPTTTRAFAFLDREVVDPTGNNNRSVIDPTLPPV 121

Query: 136 VISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKT 195
           +IS DTS FP+TF  GL+SA+RVARVVKE V+L +    V WFVFGDDDTVFFV+NLV  
Sbjct: 122 IISKDTSSFPYTFKGGLKSAIRVARVVKEVVELNE--PDVDWFVFGDDDTVFFVENLVTV 179

Query: 196 LSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHL 255
           LSKYD + WFYVGSNSE Y QN K+SF M FGGGGFAIS+SLA+VLA  LDSCL+RYAHL
Sbjct: 180 LSKYDHNGWFYVGSNSESYSQNVKNSFEMGFGGGGFAISYSLAKVLARVLDSCLVRYAHL 239

Query: 256 YGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPL 301
           YGSDAR+FSCL ELGVGL+ EPGFHQ   M+   F  +S H   PL
Sbjct: 240 YGSDARIFSCLAELGVGLSHEPGFHQVD-MRGDLFGMLSAHPLSPL 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549331|ref|XP_002515719.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223545156|gb|EEF46666.1| transferase, transferring glycosyl groups, putative [Ricinus communis]

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 136/252 (53%), Positives = 164/252 (65%), Gaps = 8/252 (3%)

Query: 32  PSRTLTPSALKNSILLFSFLLI-IYLFFYYPSLHAPPRLLSSHVVTANPLTRRHLLFSIA 90
           PSR +T   L +S     +LLI I+L       H    L   +     P    H++F IA
Sbjct: 16  PSRFITILILSSSSFCIIYLLISIFLVGISKVAHVGSSLEDFNA----PTNLGHVVFGIA 71

Query: 91  SSSSSWPRRRSYVRLWYSPNSTRALTFL-DRAADSSSAGDPSLPRIVISADTSKFPFTFP 149
           S+  SWP+R+ YV+LW++P   R   FL D   D ++    SLP + IS DTS+F +TF 
Sbjct: 72  SNQKSWPKRKEYVKLWWNPQQMRGCVFLEDMPQDDANDTTSSLPPVCISEDTSRFRYTFR 131

Query: 150 KGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGS 209
            GLRSA+RVARVV E V L    + VRW+VFGDDDTVFF +NLVKTLSKYD   W+Y+GS
Sbjct: 132 NGLRSAIRVARVVSETVKLN--HSDVRWYVFGDDDTVFFTENLVKTLSKYDHGLWYYIGS 189

Query: 210 NSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVEL 269
           NSE  EQN   SF MAFGG GFAIS+ LA+VLA   DSC  RY HLYGSD+R+ SCL EL
Sbjct: 190 NSENLEQNRYFSFEMAFGGAGFAISYPLAKVLAKVFDSCTERYPHLYGSDSRISSCLAEL 249

Query: 270 GVGLTPEPGFHQ 281
           GVGLT EPGFHQ
Sbjct: 250 GVGLTREPGFHQ 261

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
TAIR|locus:2129845	488	AT4G15240 [Arabidopsis thalian	0.902	0.586	0.384	1.3e-45
TAIR|locus:2207170	461	AT1G05280 "AT1G05280" [Arabido	0.646	0.444	0.355	4.9e-30
TAIR|locus:2025416	478	AT1G01570 [Arabidopsis thalian	0.627	0.416	0.344	6.1e-28
TAIR|locus:2026514	541	AT1G07850 [Arabidopsis thalian	0.624	0.365	0.356	1.3e-26
TAIR|locus:2128283	507	AT4G11350 [Arabidopsis thalian	0.627	0.392	0.344	2.8e-25
TAIR|locus:2196673	548	AT1G33250 [Arabidopsis thalian	0.630	0.364	0.334	1.4e-24
TAIR|locus:2177896	524	AT5G41460 [Arabidopsis thalian	0.624	0.377	0.328	4.1e-24
TAIR|locus:2040711	532	AT2G37730 [Arabidopsis thalian	0.611	0.364	0.34	9.2e-24
TAIR|locus:2126076	785	AT4G00300 [Arabidopsis thalian	0.630	0.254	0.312	1.2e-23
TAIR|locus:2117949	526	AT4G23490 [Arabidopsis thalian	0.621	0.374	0.316	3.1e-23

TAIR|locus:2129845 AT4G15240 [Arabidopsis thaliana (taxid:3702)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 115/299 (38%), Positives = 151/299 (50%)

Query:     6 NESRRRKRIISFLQNHSSFSPKIKMMPSRT--LTPSALKNXXXXXXXXXXXXXXXXXXXX 63
             N++RR++R  S L    S SP++ + P+++  LT S ++N                    
Sbjct:     2 NQTRRKRRPDSSLSRLDSLSPEM-LFPAKSPSLTSSRIRNIFLLLIFCFIIYIIFSYGTN 60

Query:    64 HAPPRLLS-SHVVTANPLTRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAA 122
                 ++ S +  ++     RRHLLF                 LWYSP STRA+ FLDR  
Sbjct:    61 FRREQISSIARSLSVFSTRRRHLLFSIAASHDSWLRRSSYVRLWYSPESTRAVVFLDRGG 120

Query:   123 DSSSAGDPSLPRIVISADTSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXX 182
               S   D +LP +++S D S+FP+ FP GL              D  D+   VRW     
Sbjct:   121 LES---DLTLPPVIVSKDVSRFPYNFPGGLRSAIRVARVVKETVDRGDKD--VRWFVFGD 175

Query:   183 XXXXXXXXNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLA 242
                     NLV  LSKYD  +WFYVGSNSE Y+QN ++S           IS SLA+VLA
Sbjct:   176 DDTVFFVDNLVTVLSKYDHRKWFYVGSNSEFYDQNVRYSFDMAFGGGGFAISASLAKVLA 235

Query:   243 GALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPL 301
               LDSCLMRY+H+YGSD+R+FSC+ ELGV LT EPGFHQ       N F +   C  PL
Sbjct:   236 KVLDSCLMRYSHMYGSDSRIFSCVAELGVTLTHEPGFHQIDVRG--NIFGLL--CAHPL 290

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2207170 AT1G05280 "AT1G05280" [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 74/208 (35%), Positives = 99/208 (47%)

Query:    78 NPLTRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPS--LPRI 135
             +P    H++F                 LW+     R   F++R   SS     S  LP +
Sbjct:    66 SPTKIEHIVFGIGSSAISWRARREYVKLWWDAQKMRGCVFVERPLPSSQNHTDSYLLPPV 125

Query:   136 VISADTSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAG-VRWXXXXXXXXXXXXXNLVK 194
              +S DTS+F +T+  G                L +  +  VRW             NL +
Sbjct:   126 CVSQDTSRFRYTWRGGDRNAIRIARCVLETVRLFNTSSEEVRWYVFGDDDTIFIPENLAR 185

Query:   195 TLSKYDDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAH 254
             TLSKYD   W+Y+GS SE Y QN+              +S SLA VLA   DSC+ RY H
Sbjct:   186 TLSKYDHTSWYYIGSTSEIYHQNSMFGHDMAFGGGGYALSSSLANVLARNFDSCIERYPH 245

Query:   255 LYGSDARVFSCLVELGVGLTPEPGFHQF 282
             LYG D+RV++C++ELGVGL+ EPGFHQF
Sbjct:   246 LYGGDSRVYACVLELGVGLSKEPGFHQF 273

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2025416 AT1G01570 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 6.1e-28, P = 6.1e-28
 Identities = 70/203 (34%), Positives = 100/203 (49%)

Query:    83 RHLLFXXXXXXXXXXXXXXXXXLWYSPNST-RALTFLDRAADSSSAGDPSLPRIVISADT 141
             +H++F                 LW+ PN     + +LD+  + +     +LP I IS+DT
Sbjct:    56 KHVVFGIAASAKFWKHRKDYVKLWWKPNGEMNGVVWLDQHINQNDNVSKTLPPIRISSDT 115

Query:   142 SKFPFTFPKGLXXXXXXXXXXXXXXDL---TDEKAGVRWXXXXXXXXXXXXXNLVKTLSK 198
             S+F + +PKGL               L   T+ +  VRW             NLVK L K
Sbjct:   116 SRFQYRYPKGLRSAIRITRIVSETVRLLNGTELEKNVRWIVMGDDDTVFFPENLVKVLRK 175

Query:   199 YDDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGS 258
             YD ++++Y+GS+SE + QN K S           IS+ LA+ L    D C+ RY+ LYGS
Sbjct:   176 YDHNQFYYIGSSSESHIQNLKFSYGMAYGGGGFAISYPLAKALEKMQDRCIQRYSELYGS 235

Query:   259 DARVFSCLVELGVGLTPEPGFHQ 281
             D R+ +C+ ELGV LT E GFHQ
Sbjct:   236 DDRIHACMSELGVPLTKEVGFHQ 258

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2026514 AT1G07850 [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 1.3e-26, P = 1.3e-26
 Identities = 72/202 (35%), Positives = 95/202 (47%)

Query:    81 TRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISAD 140
             T  H++F                  W+ P  TR + ++D+    +   DP LP I IS D
Sbjct:   124 TLDHIVFGIAASSVLWETRKEYIKSWWRPGKTRGVVWIDKRV-RTYRNDP-LPEIRISQD 181

Query:   141 TSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNLVKTLSKYD 200
             TS+F +T P G                L   K GVRW             N+V  LSKYD
Sbjct:   182 TSRFRYTHPVGDRSAVRISRVVTETLRLG--KKGVRWFVMGDDDTVFVVDNVVNVLSKYD 239

Query:   201 DDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSDA 260
               +++YVGS+SE + QN   S           IS++LA  L    D C+ RY  LYGSD 
Sbjct:   240 HTQFYYVGSSSEAHVQNIFFSYSMAFGGGGFAISYALALELLRMQDRCIQRYPGLYGSDD 299

Query:   261 RVFSCLVELGVGLTPEPGFHQF 282
             R+ +C+ ELGV LT EPGFHQ+
Sbjct:   300 RIQACMTELGVPLTKEPGFHQY 321

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2128283 AT4G11350 [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 2.8e-25, P = 2.8e-25
 Identities = 70/203 (34%), Positives = 91/203 (44%)

Query:    84 HLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAAD-SSSAGDP-SLPRIVISADT 141
             H++F                 +WY P   R   +LD      S  GD  SLP + IS DT
Sbjct:    91 HVVFGIAASSKLWKQRKEYIKIWYKPKKMRGYVWLDEEVKIKSETGDQESLPSVRISGDT 150

Query:   142 SKFPFTFPKG-LXXXXXXXXXXXXXXDLTDE-KAGVRWXXXXXXXXXXXXXNLVKTLSKY 199
             S FP+T  +G                 L  E K  VRW             NL++ L KY
Sbjct:   151 SSFPYTNKQGHRSAIRISRIVSETLMSLDSESKKNVRWFVMGDDDTVFVTDNLIRVLRKY 210

Query:   200 DDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSD 259
             D ++ +Y+GS SE + QN   S           IS+ LA  L+   D C+ RY  LYGSD
Sbjct:   211 DHEQMYYIGSLSESHLQNIIFSYGMAYGGGGFAISYPLAVALSKMQDQCIQRYPALYGSD 270

Query:   260 ARVFSCLVELGVGLTPEPGFHQF 282
              R+ +C+ ELGV LT E GFHQ+
Sbjct:   271 DRMQACMAELGVPLTKEIGFHQY 293

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2196673 AT1G33250 [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 1.4e-24, P = 1.4e-24
 Identities = 68/203 (33%), Positives = 92/203 (45%)

Query:    80 LTRRHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISA 139
             L+  HL+F                 LW+ P+  R   +L+    S   GD SLP I++S 
Sbjct:   129 LSMNHLMFGIAGSSQLWERRKELVRLWWKPSQMRGHVWLEEQV-SPEEGDDSLPPIIVSE 187

Query:   140 DTSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNLVKTLSKY 199
             D+S+F +T P G                L+     VRW             NL+  LSKY
Sbjct:   188 DSSRFRYTNPTGHPSGLRISRIAMESFRLS--LPNVRWFVLGDDDTIFNVHNLLAVLSKY 245

Query:   200 DDDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSD 259
             D     Y+G+ SE +  N+  S           IS+ LA  L+   D CL RY  LYGSD
Sbjct:   246 DPSEMVYIGNPSESHSANSYFSHNMAFGGGGIAISYPLAEALSRIHDDCLDRYPKLYGSD 305

Query:   260 ARVFSCLVELGVGLTPEPGFHQF 282
              R+ +C+ ELGV L+ EPGFHQ+
Sbjct:   306 DRLHACITELGVPLSREPGFHQW 328

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2177896 AT5G41460 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 4.1e-24, P = 4.1e-24
 Identities = 66/201 (32%), Positives = 92/201 (45%)

Query:    83 RHLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDP-SLPRIVISADT 141
             +H++F                 +WY PN  R+  +L++        D  SLP + IS DT
Sbjct:   113 QHVVFGIAASARLWKQRKEYIKIWYKPNQMRSYVWLEKPVTEEDEEDEISLPPVKISGDT 172

Query:   142 SKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNLVKTLSKYDD 201
             SKFP+   +G                L  +   VRW             NL++ L KYD 
Sbjct:   173 SKFPYKNKQGHRSAIRISRIVTETLKLGLKD--VRWFVMGDDDTVFVAENLIRVLRKYDH 230

Query:   202 DRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSDAR 261
             ++ +Y+GS SE + QN   S           IS+ LA  L+   D C+ RY  LYGSD R
Sbjct:   231 NQMYYIGSLSESHLQNIYFSYGMAYGGGGFAISYPLAVALSKMQDRCIKRYPALYGSDDR 290

Query:   262 VFSCLVELGVGLTPEPGFHQF 282
             + +C+ ELGV LT E GFHQ+
Sbjct:   291 MQACMAELGVPLTKELGFHQY 311

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2040711 AT2G37730 [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 9.2e-24, P = 9.2e-24
 Identities = 68/200 (34%), Positives = 90/200 (45%)

Query:    84 HLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSK 143
             H+ F                 LW+ PN TR   +LD     +     + P   +SADTS+
Sbjct:   100 HIAFGIGGSIQTWRDRSRYSELWWRPNVTRGFIWLDEEPPLNMTWLSTSPPYQVSADTSR 159

Query:   144 FPFTFPKGLXXXXXXXXXXXXXXDL--TDEKAGVRWXXXXXXXXXXXXXNLVKTLSKYDD 201
             F +T   G               +L  TD    VRW             NL+  L+KYD 
Sbjct:   160 FSYTCWYGSRSAIRMARIIKETFELGLTD----VRWFIMGDDDTVFFVDNLITVLNKYDH 215

Query:   202 DRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSDAR 261
             ++ +Y+G NSE  EQ+  HS           IS+ LA  L   LD C+ RYA LYGSD +
Sbjct:   216 NQMYYIGGNSESVEQDIVHSYAMAYGGGGIAISYPLAVELVKLLDGCIDRYASLYGSDQK 275

Query:   262 VFSCLVELGVGLTPEPGFHQ 281
             + +CL E+GV LT E GFHQ
Sbjct:   276 IEACLSEIGVPLTKELGFHQ 295

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2126076 AT4G00300 [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 64/205 (31%), Positives = 96/205 (46%)

Query:    83 RHLLFXXXXXXXXXXXXXXXXXLWYSPNST-RALTFLDRAADSSSAGDPSLPRIVISADT 141
             +H++F                  W+ PN       +LD+  + + +   +LP+I IS+DT
Sbjct:    81 KHIVFGIAASSDLWKHRREYVKTWWKPNGVMNGAVWLDKPINDTVSSSSALPQIRISSDT 140

Query:   142 SKFPFTFPKGLXXXXXXXXXXXXXXDL---TDEKAGVRWXXXXXXXXXXXXXNLVKTLSK 198
             S F + +  G                +   T+ +  VRW             NLV+ L K
Sbjct:   141 SSFKYRYRNGHRSAIRITRIVSETVRMLNGTEAERNVRWVVMGDDDTVFFTENLVRVLRK 200

Query:   199 YDDDRWFYVGSNSEGYEQNA-KHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYG 257
             YD  +++Y+G+ SE + QN  + S           IS+ LA+VL    D C+ RY+ LYG
Sbjct:   201 YDHKQFYYIGAPSESHLQNLHQFSYGMAYGGGGFAISYPLAKVLEKMQDRCIERYSDLYG 260

Query:   258 SDARVFSCLVELGVGLTPEPGFHQF 282
             SD R+ +C+ ELGV LT E GFHQF
Sbjct:   261 SDDRIHACMAELGVPLTKEVGFHQF 285

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2117949 AT4G23490 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 3.1e-23, P = 3.1e-23
 Identities = 64/202 (31%), Positives = 90/202 (44%)

Query:    84 HLLFXXXXXXXXXXXXXXXXXLWYSPNSTRALTFLDRAADSSSAGDPS---LPRIVISAD 140
             H++F                 +WY P   R   +LD+    S + D     LP + IS  
Sbjct:   113 HVVFGIAASSKLWKQRKEYIKIWYKPKRMRGYVWLDKEVKKSLSDDDDEKLLPPVKISGG 172

Query:   141 TSKFPFTFPKGLXXXXXXXXXXXXXXDLTDEKAGVRWXXXXXXXXXXXXXNLVKTLSKYD 200
             T+ FP+T  +G                L  +   VRW             NL++ L KYD
Sbjct:   173 TASFPYTNKQGQRSALRISRIVSETLRLGPKN--VRWFVMGDDDTVFVIDNLIRVLRKYD 230

Query:   201 DDRWFYVGSNSEGYEQNAKHSXXXXXXXXXXXISHSLARVLAGALDSCLMRYAHLYGSDA 260
              ++ +Y+GS SE + QN   S           IS+ LA+ L+   D C+ RY  LYGSD 
Sbjct:   231 HEQMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKMQDRCIQRYPALYGSDD 290

Query:   261 RVFSCLVELGVGLTPEPGFHQF 282
             R+ +C+ ELGV LT E GFHQ+
Sbjct:   291 RMQACMAELGVPLTKELGFHQY 312

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	317
PLN03153	537	PLN03153, PLN03153, hypothetical protein; Provisio	4e-64
pfam04646	256	pfam04646, DUF604, Protein of unknown function, DU	2e-33
pfam02434	248	pfam02434, Fringe, Fringe-like	6e-11

>gnl|CDD|215605 PLN03153, PLN03153, hypothetical protein; Provisional

 Score =  210 bits (537), Expect = 4e-64
 Identities = 103/203 (50%), Positives = 129/203 (63%), Gaps = 3/203 (1%)

Query: 80  LTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISA 139
           L+  H++F IA SS  W RR+  VRLW+ PN  R   +L+    S   GD SLP I++S 
Sbjct: 119 LSLNHIMFGIAGSSQLWKRRKELVRLWWRPNQMRGHVWLEEQV-SPEEGDDSLPPIMVSE 177

Query: 140 DTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY 199
           DTS+F +T P G  S +R++R+V E+  L      VRWFV GDDDT+F  DNLV  LSKY
Sbjct: 178 DTSRFRYTNPTGHPSGLRISRIVLESFRLG--LPDVRWFVLGDDDTIFNADNLVAVLSKY 235

Query: 200 DDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSD 259
           D     YVG  SE +  N+  S  MAFGGGG AIS+ LA  L+  LD CL RY  LYGSD
Sbjct: 236 DPSEMVYVGGPSESHSANSYFSHNMAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSD 295

Query: 260 ARVFSCLVELGVGLTPEPGFHQF 282
            R+ +C+ ELGV L+ EPGFHQ+
Sbjct: 296 DRLHACITELGVPLSREPGFHQW 318

Length = 537

>gnl|CDD|218189 pfam04646, DUF604, Protein of unknown function, DUF604

 Score =  123 bits (311), Expect = 2e-33
 Identities = 42/67 (62%), Positives = 49/67 (73%)

Query: 216 QNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTP 275
           QN   S+GMAFGGGGFAIS+ LA  LA   D C+ RY  LYGSD R+ +C+ ELGV LT 
Sbjct: 1   QNIYFSYGMAFGGGGFAISYPLAAALARMQDGCIERYPALYGSDDRIHACMAELGVPLTK 60

Query: 276 EPGFHQF 282
           EPGFHQ+
Sbjct: 61  EPGFHQY 67

This family includes a conserved region found in several uncharacterized plant proteins. Length = 256

>gnl|CDD|190308 pfam02434, Fringe, Fringe-like

 Score = 61.2 bits (149), Expect = 6e-11
 Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 26/129 (20%)

Query: 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS--------EGYEQNAKHSFGMA 225
           G +WF   DDD    V  LV+ LS Y+  +  Y+G  S        E  + N K  F  A
Sbjct: 84  GKKWFCHVDDDNYVNVPRLVRLLSCYNHTQDVYLGKPSLYRPIEATERVKNNRKVGFWFA 143

Query: 226 FGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARV-----------FSCLVELGVGLT 274
            GG GF IS  LA  ++               +  ++              L  LGV LT
Sbjct: 144 TGGAGFCISRGLALKMSPWASGG-----RFMSTSEKIRLPDDCTLGYIIENL--LGVPLT 196

Query: 275 PEPGFHQFR 283
             P FH   
Sbjct: 197 HSPLFHSHL 205

The drosophila protein fringe (FNG) is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands. FNG is localised to the Golgi apparatus (not secreted as previously thought). Modification of Notch occurs through glycosylation by FNG. The xenopus homologue, lunatic fringe, has been implicated in a variety of functions. Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	317
PLN03153	537	hypothetical protein; Provisional	100.0
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	100.0
KOG2246	364	consensus Galactosyltransferases [Carbohydrate tra	100.0
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	99.88
KOG3708	681	consensus Uncharacterized conserved protein [Funct	99.71
KOG2287	349	consensus Galactosyltransferases [Carbohydrate tra	99.55
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	99.48
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	99.47
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	99.34
KOG2288	274	consensus Galactosyltransferases [Carbohydrate tra	99.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	98.98
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	95.78
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	95.08
PRK11204	420	N-glycosyltransferase; Provisional	95.03
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	94.74
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	94.17
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	93.92
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	93.65
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	93.2
PLN03181	453	glycosyltransferase; Provisional	93.07
PRK14583	444	hmsR N-glycosyltransferase; Provisional	92.9
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	92.84
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	92.37
KOG2246	364	consensus Galactosyltransferases [Carbohydrate tra	91.69
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	91.2
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	90.92
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	90.89
COG1215	439	Glycosyltransferases, probably involved in cell wa	90.53
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	90.06
PF05679	499	CHGN: Chondroitin N-acetylgalactosaminyltransferas	89.42
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	89.36
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	88.3
cd06437	232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	88.3
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	88.29
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	88.14
PF13704	97	Glyco_tranf_2_4: Glycosyl transferase family 2	87.24
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	86.94
cd06438	183	EpsO_like EpsO protein participates in the methano	86.9
PTZ00260	333	dolichyl-phosphate beta-glucosyltransferase; Provi	84.07
cd06436	191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	83.77
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	83.55
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	83.46
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	82.31
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	81.47
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	81.35
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	81.13
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	80.52
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	80.31

>PLN03153 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-52  Score=411.29  Aligned_cols=228  Identities=46%  Similarity=0.773  Sum_probs=213.0

Q ss_pred             CCCCCCcEEEEEecCCCchHHHHHHHHHHhCCCCCeEEEEecCCCCCCCCCCCCCCceeecCCCCCCccCCCCCchhhHH
Q 021089           78 NPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVR  157 (317)
Q Consensus        78 ~~~~~~~I~f~I~Ts~~~~~~R~~~i~~ww~~~~~~~~vfsD~~~~~~~~~~~~lp~v~i~~d~~~~~y~~~~g~~~a~r  157 (317)
                      .+++.+||+|||+|+++.|++|.++++.||+++.++.+|+.|....+ ...+..+|++.|+.|+++|.|+++.|+.++++
T Consensus       117 ~~t~~~hIvF~I~~s~~~w~~R~~yik~wW~p~~~rg~v~ld~~~~~-~~~~~~~P~i~is~d~s~f~y~~~~Gh~sa~r  195 (537)
T PLN03153        117 AELSLNHIMFGIAGSSQLWKRRKELVRLWWRPNQMRGHVWLEEQVSP-EEGDDSLPPIMVSEDTSRFRYTNPTGHPSGLR  195 (537)
T ss_pred             CCCccccEEEEEEEchhhhhhhhhhhhhhcCcccceeEEEecccCCC-CCCcCCCCCEEeCCCcccccccCCCCcHHHHH
Confidence            46899999999999999999999999999999999999999887542 23467899999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcccccccccccccCccccccHHH
Q 021089          158 VARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSL  237 (317)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~~~~~~g~~~~~GGaG~vlSr~l  237 (317)
                      +++++.++++.+.  +++||||++|||||++++||+++|++||+++++|||..+|...++..++|.|++|||||+||+++
T Consensus       196 I~rmv~et~~~~~--pd~kWfVf~DDDTyf~~~NLv~~Ls~YDptkp~YIGs~Se~~~qn~~f~~~fA~GGAG~~LSrPL  273 (537)
T PLN03153        196 ISRIVLESFRLGL--PDVRWFVLGDDDTIFNADNLVAVLSKYDPSEMVYVGGPSESHSANSYFSHNMAFGGGGIAISYPL  273 (537)
T ss_pred             HHHHHHHHHHhhC--CCCCEEEEecCCccccHHHHHHHHhhcCCCCCEEecccccccccccccccccccCCceEEEcHHH
Confidence            9999999988754  99999999999999999999999999999999999999998877777777899999999999999


Q ss_pred             HHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCCCCCcCccCCccccccccccCCcccccccchhH
Q 021089          238 ARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQM  309 (317)
Q Consensus       238 l~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~f~q~d~~~~d~~g~l~~H~~~P~~s~h~~~~  309 (317)
                      |++|.+.++.|..+|...+++|.+||+|++++||++|++++|||.|++| |+.|++++|+.+|++|+||++.
T Consensus       274 ae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~gfhQ~D~~G-d~~G~les~p~~P~vSlHH~~~  344 (537)
T PLN03153        274 AEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREPGFHQWDIRG-NAHGLLSSHPIAPFVSIHHVEA  344 (537)
T ss_pred             HHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecCCccccccCC-CcchHhhcCCCCCceeeeeccc
Confidence            9999999999998887788999999999999999999999999999999 9999999999999999999974

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=100.00  E-value=1.5e-35  Score=274.51  Aligned_cols=191  Identities=25%  Similarity=0.397  Sum_probs=112.5

Q ss_pred             CCCCCcEEEEEecCCCchHHHHHHHHHHhCCCCCeEEE-EecCCCCCCCCCCCCCCce----eecCCCCCCccCCCCCch
Q 021089           79 PLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALT-FLDRAADSSSAGDPSLPRI----VISADTSKFPFTFPKGLR  153 (317)
Q Consensus        79 ~~~~~~I~f~I~Ts~~~~~~R~~~i~~ww~~~~~~~~v-fsD~~~~~~~~~~~~lp~v----~i~~d~~~~~y~~~~g~~  153 (317)
                      +++.++|+|+|+|++++|++|+++++.||++++++..+ |+|.++       ..+|+.    .+..++..       ++ 
T Consensus         2 ~~~~~dI~i~V~T~~k~h~tR~~~I~~TW~~~~~~~~~ifsd~~d-------~~l~~~~~~~l~~~~~~~-------~~-   66 (252)
T PF02434_consen    2 PVTLDDIFIAVKTTKKFHKTRAPAIKQTWAKRCNKQTFIFSDAED-------PSLPTVTGVHLVNPNCDA-------GH-   66 (252)
T ss_dssp             ---GGGEEEEEE--GGGTTTTHHHHHHTGGGGSGGGEEEEESS---------HHHHHHHGGGEEE---------------
T ss_pred             CcccccEEEEEEeCHHHHHHHHHHHHHHHHhhcCCceEEecCccc-------cccccccccccccCCCcc-------hh-
Confidence            57899999999999999999999999999998887777 798874       344543    12233321       11 


Q ss_pred             hhHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcc----------ccccccc
Q 021089          154 SAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQ----------NAKHSFG  223 (317)
Q Consensus       154 ~a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~~----------~~~~g~~  223 (317)
                      +.+.....+...++++. .+++|||+++||||||+++||+++|++||+++|+|||.++.....          ....+|.
T Consensus        67 ~~~~~~~~~~~~y~~~~-~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~~~~~yiG~~~~~~~~~~~~~~~~~~~~~~~~~  145 (252)
T PF02434_consen   67 CRKTLSCKMAYEYDHFL-NSDKDWFCFADDDTYVNVENLRRLLSKYDPSEPIYIGRPSGDRPIEIIHRFNPNKSKDSGFW  145 (252)
T ss_dssp             ------HHHHHHHHHHH-HHT-SEEEEEETTEEE-HHHHHHHHTTS-TTS--EEE-EE----------------------
T ss_pred             hHHHHHHHHHHHHHhhh-cCCceEEEEEeCCceecHHHHHHHHhhCCCccCEEeeeeccCccceeeccccccccCcCceE
Confidence            11111111122232221 278999999999999999999999999999999999999743210          1234567


Q ss_pred             ccccCccccccHHHHHHHHHhhhhh--hhhcc-cCCcchHHHHHHHHH-hCCcceeCCCCCcCccC
Q 021089          224 MAFGGGGFAISHSLARVLAGALDSC--LMRYA-HLYGSDARVFSCLVE-LGVGLTPEPGFHQFRCM  285 (317)
Q Consensus       224 ~~~GGaG~vlSr~ll~~L~~~~d~C--~~~~~-~~~~~D~~lg~Cl~~-lGV~lt~~~~f~q~d~~  285 (317)
                      |++|||||||||+++++|.+....|  ..... ..+++|+.||.|++. +||++++++.|||....
T Consensus       146 f~~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~fhs~~~~  211 (252)
T PF02434_consen  146 FATGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPLFHSHLEN  211 (252)
T ss_dssp             EE-GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT---SSS-
T ss_pred             eeCCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechhhcccCcc
Confidence            8999999999999999998866544  32111 145799999999998 99999999999997444

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.5e-34  Score=279.40  Aligned_cols=206  Identities=29%  Similarity=0.429  Sum_probs=172.9

Q ss_pred             CCCCCcEEEEEecCCCchHHHHHHHHHHhCCCCCeEEEEecCCCCCCCCCCCCCCceeecCCCCCCccCCCCCchhhHHH
Q 021089           79 PLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRV  158 (317)
Q Consensus        79 ~~~~~~I~f~I~Ts~~~~~~R~~~i~~ww~~~~~~~~vfsD~~~~~~~~~~~~lp~v~i~~d~~~~~y~~~~g~~~a~r~  158 (317)
                      ......|+|+|.|++.++.+|++.+++||.++|.+..+|+..-.    +.+..+|++.         |..+.|.+.+|++
T Consensus        87 l~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~~~~f~s~~~s----~~~~~f~~v~---------~~~~~g~~~~~~k  153 (364)
T KOG2246|consen   87 LSRSGRVLCWVLTSPMRHVTRADAVKETWLKRCDKGIFFSPTLS----KDDSRFPTVY---------YNLPDGYRSLWRK  153 (364)
T ss_pred             cCCCceEEEEEEecCcCceeehhhhhcccccccCcceecCccCC----CCCCcCceee---------ccCCcchHHHHHH
Confidence            46778999999999999999999999999998999999984310    1135566663         3344577889998


Q ss_pred             HHHH-HHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcccccccccccccCccccccHHH
Q 021089          159 ARVV-KEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSL  237 (317)
Q Consensus       159 ~~~l-~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~~~~~~g~~~~~GGaG~vlSr~l  237 (317)
                      .+.. ++++++..  +++|||+++|||||++++||+++|.+|||++|+|||..++.+.++   +  |.+||||+++|+++
T Consensus       154 tr~~~~yv~~~~~--~~~dWf~~aDDDTy~i~eNLr~~L~~yDp~~p~YiG~~~~~~~~~---~--y~~g~ag~~ls~aa  226 (364)
T KOG2246|consen  154 TRIAFKYVYDHIL--KDYDWFLKADDDTYFIMENLRYVLSKYDPEKPVYLGYRSKSYFQN---G--YSSGGAGYVLSFAA  226 (364)
T ss_pred             HHHHHHHHHHhcc--CCCCeEEeccCCeEEeHHHHHHHHhhcCCCCcEEecccccccccc---c--cccCCCCcceeHHH
Confidence            8755 45555665  899999999999999999999999999999999999999877654   3  46788888888888


Q ss_pred             HHHHHHh----hhhhhhhcccCCcchHHHHHHHHHhCCcceeCCCCCcCccCCccccccccccCCcccccccchhH
Q 021089          238 ARVLAGA----LDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISFHCREPLRHGGEVQM  309 (317)
Q Consensus       238 l~~L~~~----~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~f~q~d~~~~d~~g~l~~H~~~P~~s~h~~~~  309 (317)
                      ++.+++.    .+.|+.++.. +++|..||+|++++||+++++   ||.|.++ ++.++..+|+..|.+++||.++
T Consensus       227 ~~~la~~l~~~~~~C~~~~~~-~~eD~~i~~Cl~~~GV~~~d~---~d~dg~~-rf~~~~p~~~~~p~~s~~~~~~  297 (364)
T KOG2246|consen  227 LRRLAERLLNNEDKCPQRYPS-YGEDRRIGRCLAEVGVPATDE---RDEDGRG-RFLPLLPAHPIAPLVSLHHLWL  297 (364)
T ss_pred             HHHHHHHHhcchhhcccccCC-chhHHHHHHHHHHhCCCccCc---hhhhccc-ccCCCChhhccCCcccccccee
Confidence            8887654    4679887665 789999999999999999998   8999999 9999999999999999998874

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=99.88  E-value=2.8e-23  Score=189.31  Aligned_cols=93  Identities=47%  Similarity=0.713  Sum_probs=88.6

Q ss_pred             ccccccccccccCccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCCCCCcCccCCccccccccc
Q 021089          216 QNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQFRCMKAINFFQISF  295 (317)
Q Consensus       216 ~~~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~f~q~d~~~~d~~g~l~~  295 (317)
                      ||..++|.||+|||||+||++|+++|.+++|.|++++...+++|.++..|++++||++|.++||||.|++| |+.|++++
T Consensus         1 Qn~~fs~~MAfGGgG~~iS~pLa~~L~~~~d~C~~r~~~~~g~D~~i~~C~~~lgv~LT~e~g~hQ~Di~G-d~~G~~~a   79 (255)
T PF04646_consen    1 QNVMFSYNMAFGGGGFAISYPLAKALAKMQDDCIERYPHLYGGDQRIQACIAELGVPLTKEPGFHQMDIRG-DPSGFLEA   79 (255)
T ss_pred             CCceeeccccccCceeEEcHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHhCCCceecCCceeEeecc-Ccceeeec
Confidence            45567888999999999999999999999999999998899999999999999999999999999999999 99999999


Q ss_pred             cCCcccccccchhH
Q 021089          296 HCREPLRHGGEVQM  309 (317)
Q Consensus       296 H~~~P~~s~h~~~~  309 (317)
                      |+..|++|+||||.
T Consensus        80 ~~~~pl~SlHH~~~   93 (255)
T PF04646_consen   80 HPLAPLVSLHHWDS   93 (255)
T ss_pred             CCCCceeeeeehhh
Confidence            99999999999964

>KOG3708 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.71  E-value=1.5e-17  Score=162.68  Aligned_cols=170  Identities=19%  Similarity=0.266  Sum_probs=134.2

Q ss_pred             CCCCCCcEEEEEecCCCchHHHHHHHHHHhCCCCCeEEEEecCCCCCCCCCCCCCCceeecCCCCCCccCCCCCchhhHH
Q 021089           78 NPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVR  157 (317)
Q Consensus        78 ~~~~~~~I~f~I~Ts~~~~~~R~~~i~~ww~~~~~~~~vfsD~~~~~~~~~~~~lp~v~i~~d~~~~~y~~~~g~~~a~r  157 (317)
                      .-.+.++++++|+|-    .+-+.++++|.+++.+++.+|.|+..     ++..+..+.+....         ..+.+|+
T Consensus        21 ELG~RErl~~aVmte----~tlA~a~NrT~ahhvprv~~F~~~~~-----i~~~~a~~~~vs~~---------d~r~~~~   82 (681)
T KOG3708|consen   21 ELGTRERLMAAVMTE----STLALAINRTLAHHVPRVHLFADSSR-----IDNDLAQLTNVSPY---------DLRGQKT   82 (681)
T ss_pred             hhhhHHHHHHHHHHH----HHHHHHHHHHHHhhcceeEEeecccc-----ccccHhhccccCcc---------ccCcccc
Confidence            346778999999991    16668899999999999999998773     23333334332111         1235788


Q ss_pred             HHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcccccccccccccCccccccHHH
Q 021089          158 VARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSL  237 (317)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~~~~~~g~~~~~GGaG~vlSr~l  237 (317)
                      ++.+++++++++.  .+||||+++-|+|||+...|.+++.+.+.++++|+|.-.++     ..+  =|++|.|+.||+++
T Consensus        83 ~s~vl~~l~~~~~--~~YDwFll~~D~tYv~a~~L~~l~~hmsin~dlymGEe~~~-----gs~--rC~l~~G~LLS~s~  153 (681)
T KOG3708|consen   83 HSMVLGLLFNMVH--NNYDWFLLAKDSTYVNAFVLLRLIDHMSINEDLYMGEEAED-----GSG--RCRLDTGMLLSQSL  153 (681)
T ss_pred             HHHHHHHHHHhhc--cccceEEEecCcceecHHHHHHHHhhcccccccccchhhhC-----ccC--ccccccceeecHHH
Confidence            8899999999876  89999999999999999999999999999999999955431     112  29999999999999


Q ss_pred             HHHHHHhhhhhhhhcccCCcchHHHHHHHHH-hCCccee
Q 021089          238 ARVLAGALDSCLMRYAHLYGSDARVFSCLVE-LGVGLTP  275 (317)
Q Consensus       238 l~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~-lGV~lt~  275 (317)
                      |.+|.++.+.|.+. ...--.|..+|+|+.. +||.++.
T Consensus       154 l~~lrnnle~C~~~-~lsad~d~~lgrCi~~At~v~C~~  191 (681)
T KOG3708|consen  154 LHALRNNLEGCRND-ILSADPDEWLGRCIQDATGVGCKP  191 (681)
T ss_pred             HHHHHhhHHHhhcc-cccCCcHHHHHHHHHHhhcCCccc
Confidence            99999999999642 2222378999999986 7888764

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=99.55  E-value=8.5e-14  Score=134.88  Aligned_cols=211  Identities=20%  Similarity=0.223  Sum_probs=138.7

Q ss_pred             CCcEEEEEecCCCchHHHHHHHHHHhCCC-----CCeEEEEecCCCCCC---CCC---CCCCCceee-c-CCCCCCccCC
Q 021089           82 RRHLLFSIASSSSSWPRRRSYVRLWYSPN-----STRALTFLDRAADSS---SAG---DPSLPRIVI-S-ADTSKFPFTF  148 (317)
Q Consensus        82 ~~~I~f~I~Ts~~~~~~R~~~i~~ww~~~-----~~~~~vfsD~~~~~~---~~~---~~~lp~v~i-~-~d~~~~~y~~  148 (317)
                      ..+|+++|+|.+++..+|...-++|...+     .-+.+|++.....+.   ..+   ......+.+ . .|+    |.+
T Consensus        94 ~~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~ygDIi~~df~Dt----y~n  169 (349)
T KOG2287|consen   94 PPELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEARLYGDIIQVDFEDT----YFN  169 (349)
T ss_pred             CceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHHHhCCEEEEecccc----hhc
Confidence            46899999999999988855555554443     135555555443210   000   111223322 1 222    211


Q ss_pred             CCCchhhHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccC-CCCCCeEEeecCCCC---------c---
Q 021089          149 PKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY-DDDRWFYVGSNSEGY---------E---  215 (317)
Q Consensus       149 ~~g~~~a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~-d~~~p~yiG~~~e~~---------~---  215 (317)
                           -..+...++.+...+-   +++++.+++|||+||++++|+++|.+. ++++..|.|......         +   
T Consensus       170 -----ltlKtl~~l~w~~~~c---p~akfi~K~DDDvfv~~~~L~~~L~~~~~~~~~~~~G~v~~~~~p~R~~~~KwyVp  241 (349)
T KOG2287|consen  170 -----LTLKTLAILLWGVSKC---PDAKFILKIDDDVFVNPDNLLEYLDKLNDPSSDLYYGRVIQNAPPIRDKTSKWYVP  241 (349)
T ss_pred             -----hHHHHHHHHHHHHhcC---CcceEEEeccCceEEcHHHHHHHHhccCCCCcceEEEeecccCCCCCCCCCCCccC
Confidence                 2345555666665533   899999999999999999999999999 999999999875431         0   


Q ss_pred             --ccccccccccccCccccccHHHHHHHHHhhhhhhhhcccCC-cchHHHHHHHHHh-CCcceeCCCCCcCccCCc--cc
Q 021089          216 --QNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVEL-GVGLTPEPGFHQFRCMKA--IN  289 (317)
Q Consensus       216 --~~~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~-~~D~~lg~Cl~~l-GV~lt~~~~f~q~d~~~~--d~  289 (317)
                        ..+...|+-..+|+||++|+.++++|.....     ....+ -||+.+|.|+++. ||...+.+++......-+  +.
T Consensus       242 ~~~y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~-----~~~~~~iEDV~~g~~l~~~~gi~~~~~~~~~~~~~~~~~~~~  316 (349)
T KOG2287|consen  242 ESEYPCSVYPPYASGPGYVISGDAARRLLKASK-----HLKFFPIEDVFVGGCLAEDLGIKPVNHPGFFEIPLSFDPCCY  316 (349)
T ss_pred             HHHCCCCCCCCcCCCceeEecHHHHHHHHHHhc-----CCCccchHHHHHHHHHHHhcCCCcccCcccccccccCCCCcc
Confidence              1122234444568899999999999998422     12233 3999999999986 999888877554432111  33


Q ss_pred             cccccccCCcccccccchhH
Q 021089          290 FFQISFHCREPLRHGGEVQM  309 (317)
Q Consensus       290 ~g~l~~H~~~P~~s~h~~~~  309 (317)
                      .++++.|..+|.-....|+.
T Consensus       317 ~~~~~~H~~~p~e~~~~w~~  336 (349)
T KOG2287|consen  317 RDLLAVHRLSPNEMIYLWKK  336 (349)
T ss_pred             cceEEEecCCHHHHHHHHHH
Confidence            68999999988655555543

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=99.48  E-value=6.4e-13  Score=136.13  Aligned_cols=209  Identities=12%  Similarity=0.095  Sum_probs=126.2

Q ss_pred             CCcEEEEEecCCCchHHHHHHHHHHhCCC------CCeEEEEecCCCCC-CC-CC---CCCCCceeecCCCCCCccCCCC
Q 021089           82 RRHLLFSIASSSSSWPRRRSYVRLWYSPN------STRALTFLDRAADS-SS-AG---DPSLPRIVISADTSKFPFTFPK  150 (317)
Q Consensus        82 ~~~I~f~I~Ts~~~~~~R~~~i~~ww~~~------~~~~~vfsD~~~~~-~~-~~---~~~lp~v~i~~d~~~~~y~~~~  150 (317)
                      .-+++++|.|++++.+.| .+|+.||++.      .-...|++....+. .+ .+   ......+.+. |-. ..|.+  
T Consensus       384 ~~~LlI~V~Sap~nf~rR-~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~-dF~-DsY~N--  458 (636)
T PLN03133        384 PLDLFIGVFSTANNFKRR-MAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLM-PFV-DYYSL--  458 (636)
T ss_pred             ceEEEEEEeCCcccHHHH-HHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEE-eee-chhhh--
Confidence            457999999999998877 5555555541      12345555433211 00 00   1112223221 110 01221  


Q ss_pred             CchhhHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCc--------------c
Q 021089          151 GLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYE--------------Q  216 (317)
Q Consensus       151 g~~~a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~--------------~  216 (317)
                         -.++...++.+...  .  +++++++++|||+||++++|.++|.+.+..+.+|+|.......              .
T Consensus       459 ---LTlKtl~~~~wa~~--c--~~akFilK~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~e  531 (636)
T PLN03133        459 ---ITWKTLAICIFGTE--V--VSAKYVMKTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEE  531 (636)
T ss_pred             ---hHHHHHHHHHHHHh--C--CCceEEEEcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHHH
Confidence               13333334444332  2  7899999999999999999999999888888899998642210              1


Q ss_pred             cccccccccccCccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHH---hCCcceeCC--CCCcCccCCccccc
Q 021089          217 NAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVE---LGVGLTPEP--GFHQFRCMKAINFF  291 (317)
Q Consensus       217 ~~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~---lGV~lt~~~--~f~q~d~~~~d~~g  291 (317)
                      ++...|+...+|+|||||+.+++.|+.......  .....-||+.+|.|+++   .|+++.+..  .|+   .++ ...+
T Consensus       532 yp~~~YPpYasG~gYVlS~Dla~~L~~~s~s~~--l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~r~~---~~~-C~~~  605 (636)
T PLN03133        532 WPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGR--LKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIY---NEG-CKDG  605 (636)
T ss_pred             CCCCCCCCCCCcCEEEEcHHHHHHHHHhhhhcc--cCcCChhhHhHHHHHHHhcccCCCceeeCCCccc---CCc-CCCC
Confidence            122345444568899999999999987543211  11122499999999875   466665432  233   234 4467


Q ss_pred             cccccCCcccccccchh
Q 021089          292 QISFHCREPLRHGGEVQ  308 (317)
Q Consensus       292 ~l~~H~~~P~~s~h~~~  308 (317)
                      ++.+|..+|--.+..|+
T Consensus       606 ~i~~H~~sP~eM~~lW~  622 (636)
T PLN03133        606 YVVAHYQSPREMLCLWQ  622 (636)
T ss_pred             eEEEecCCHHHHHHHHH
Confidence            88999999865555553

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=99.47  E-value=7.4e-13  Score=128.97  Aligned_cols=184  Identities=20%  Similarity=0.161  Sum_probs=116.2

Q ss_pred             CcEEEEEecCCCchHHHHHHHHHHhCCC-----------CCeEEEEecCCCC---CCC-CC---CCCCCceeecCCCCCC
Q 021089           83 RHLLFSIASSSSSWPRRRSYVRLWYSPN-----------STRALTFLDRAAD---SSS-AG---DPSLPRIVISADTSKF  144 (317)
Q Consensus        83 ~~I~f~I~Ts~~~~~~R~~~i~~ww~~~-----------~~~~~vfsD~~~~---~~~-~~---~~~lp~v~i~~d~~~~  144 (317)
                      -.++++|.|++++.+.| .+|+.||++.           +-.+.|++....+   ..+ .+   ......+.+. |- ..
T Consensus       139 ~~LvIgI~Sap~~~~RR-~AIR~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~l-Df-vD  215 (408)
T PLN03193        139 YLMVVGINTAFSSRKRR-DSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRL-DH-VE  215 (408)
T ss_pred             EEEEEEEeCCCCCHHHH-HHHHHHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEE-ec-cc
Confidence            37899999999988766 5555555542           1234445543321   000 01   1122233331 11 01


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCC--cc------
Q 021089          145 PFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGY--EQ------  216 (317)
Q Consensus       145 ~y~~~~g~~~a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~--~~------  216 (317)
                      .|.+.     ..+....++++++.    .++++|+++|||+||++++|.++|++......+|+|....+.  .+      
T Consensus       216 sY~NL-----T~KTl~~f~wA~~~----~dAkF~mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~  286 (408)
T PLN03193        216 GYLEL-----SAKTKTYFATAVAM----WDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYH  286 (408)
T ss_pred             ccccc-----hHHHHHHHHHHHHc----CCCeEEEEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCccccCCCCcCc
Confidence            23221     23333566665553    689999999999999999999999887766679999974221  00      


Q ss_pred             ----c----ccccccccccCccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCCCCCcC
Q 021089          217 ----N----AKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFHQF  282 (317)
Q Consensus       217 ----~----~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~f~q~  282 (317)
                          .    ....|+....|+|||||+.+++.|..+...- ..|   -.||+.+|.|+..++|...+.+.||-.
T Consensus       287 epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~L-~~y---~~EDV~vG~Wl~~L~V~~vdd~~fcc~  356 (408)
T PLN03193        287 EPEYWKFGENGNKYFRHATGQLYAISKDLASYISINQHVL-HKY---ANEDVSLGSWFIGLDVEHIDDRRLCCG  356 (408)
T ss_pred             CcccccccCccccCCCCCCcceEEehHHHHHHHHhChhhh-ccc---CcchhhhhhHhccCCceeeecccccCC
Confidence                0    1122333345788999999999998654422 111   249999999999899999999999854

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.34  E-value=1.4e-11  Score=109.59  Aligned_cols=114  Identities=18%  Similarity=0.171  Sum_probs=85.6

Q ss_pred             hHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccC--CCCCCeEEeecCCCCc--------------cc-
Q 021089          155 AVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSEGYE--------------QN-  217 (317)
Q Consensus       155 a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~--d~~~p~yiG~~~e~~~--------------~~-  217 (317)
                      ..+...+++++.++.   +++++++++|||+||++++|.++|.+.  ++.+..+.|.......              .. 
T Consensus        64 t~K~~~~~~w~~~~c---~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~v~~~~y~  140 (195)
T PF01762_consen   64 TLKTLAGLKWASKHC---PNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWYVSEEEYP  140 (195)
T ss_pred             hHHHHHHHHHHHhhC---CchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCceeeeeecc
Confidence            345556788887754   789999999999999999999999887  7777888887653210              01 


Q ss_pred             -ccccccccccCccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          218 -AKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       218 -~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                       ..+. +||. |+||+||+.+++.|......    .+...-||+.+|.|+..+||+.++.|
T Consensus       141 ~~~yP-~y~~-G~~yvls~~~v~~i~~~~~~----~~~~~~eDv~iGi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  141 DDYYP-PYCS-GGGYVLSSDVVKRIYKASSH----TPFFPLEDVFIGILAEKLGIKPIHDP  195 (195)
T ss_pred             cccCC-CcCC-CCeEEecHHHHHHHHHHhhc----CCCCCchHHHHHHHHHHCCCCccCCC
Confidence             1222 4665 78999999999999975322    22233499999999999999988754

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=99.00  E-value=1.1e-09  Score=100.21  Aligned_cols=115  Identities=22%  Similarity=0.278  Sum_probs=84.2

Q ss_pred             HHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCC-------------ccccc--ccccc
Q 021089          160 RVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGY-------------EQNAK--HSFGM  224 (317)
Q Consensus       160 ~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~-------------~~~~~--~g~~~  224 (317)
                      ..+..+++++    ++++|+++|||+||+++.|...|+++-....+|||-...+-             +....  .-|++
T Consensus        98 ~~f~~A~~~~----daeFyvKvDDDv~v~l~~L~~~la~~r~~pr~YiGcmksg~v~~~~~~kw~EpeWkfg~~g~Yfrh  173 (274)
T KOG2288|consen   98 AFFSAAVAHW----DAEFYVKVDDDVYVRLARLGTLLARERSHPRLYIGCMKSGPVLTQPGGKWYEPEWKFGDNGNYFRH  173 (274)
T ss_pred             HHHHHHHHhc----cceEEEEccccceecHHHHHHHHHhhccCCceEEEEecCCccccCCCCcccChhhhcCcccccchh
Confidence            4555556554    79999999999999999999999999777899999964221             00111  13455


Q ss_pred             cccCccccccHHHHHHHHHhhhhhhhhcccCC-cchHHHHHHHHHhCCcceeCCCCCcCcc
Q 021089          225 AFGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEPGFHQFRC  284 (317)
Q Consensus       225 ~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~-~~D~~lg~Cl~~lGV~lt~~~~f~q~d~  284 (317)
                      |. |+||+||+.++.-|.-+.+--     ..| .|||.+|..+.-+.|.-.+.+.+|....
T Consensus       174 A~-G~~YvlS~dLa~yi~in~~lL-----~~y~nEDVSlGaW~~gldV~h~dd~rlC~~~~  228 (274)
T KOG2288|consen  174 AT-GGGYVLSKDLATYISINRQLL-----HKYANEDVSLGAWMIGLDVEHVDDPRLCCSTP  228 (274)
T ss_pred             cc-CceEEeeHHHHHHHHHhHHHH-----HhhccCCcccceeeeeeeeeEecCCcccccch
Confidence            65 678999999999988764432     223 3999999998777777777788885544

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=98.98  E-value=4.5e-09  Score=101.48  Aligned_cols=105  Identities=17%  Similarity=0.159  Sum_probs=72.5

Q ss_pred             HHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcccccccccccccCccccccHHHH
Q 021089          159 ARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLA  238 (317)
Q Consensus       159 ~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~~~~~~g~~~~~GGaG~vlSr~ll  238 (317)
                      ...+++.++..   |++++++++|||+|++++++++.|.. .|.+.+|+|.............-+|| +|.||+||+.++
T Consensus       187 ~l~~~wA~~~c---P~a~YImKgDDDvFVrVp~lL~~Lr~-~prr~LY~G~v~~~~~p~Rd~~PpY~-~G~gYvLSrDVA  261 (382)
T PTZ00210        187 YLWLRFALHMF---PNVSYIVKGDDDIFIRVPKYLADLRV-MPRHGLYMGRYNYYNRIWRRNQLTYV-NGYCITLSRDTA  261 (382)
T ss_pred             HHHHHHHHHhC---CCCCeEEEcCCCeEeeHHHHHHHHhh-CCCCceEEEeeCCCCccccCCCCCcc-ccceeeccHHHH
Confidence            34556666543   89999999999999999999999954 56778999997643221111112455 578899999999


Q ss_pred             HHHHHhhhhhh-----------hhccc--CCcchHHHHHHHHH
Q 021089          239 RVLAGALDSCL-----------MRYAH--LYGSDARVFSCLVE  268 (317)
Q Consensus       239 ~~L~~~~d~C~-----------~~~~~--~~~~D~~lg~Cl~~  268 (317)
                      +.|.....-..           +.|..  ...||+.+|..|..
T Consensus       262 ~~Lvs~~pl~rL~~~pys~~~~~~y~~~~~~~EDiMvG~vLr~  304 (382)
T PTZ00210        262 QAIISYKPLERLVNMPFSMWDYFDFLDLGMFYEDVMVGMILRE  304 (382)
T ss_pred             HHHHhhChHhHhhcCCCchHHHHHHHHhhcCchHHHHHHHHHH
Confidence            99986521110           11111  22499999999964

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=95.78  E-value=0.045  Score=47.96  Aligned_cols=99  Identities=19%  Similarity=0.223  Sum_probs=67.4

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCC-CCCC----eEEeecCCCCcc--------------cccccccccccCccccc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRW----FYVGSNSEGYEQ--------------NAKHSFGMAFGGGGFAI  233 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d-~~~p----~yiG~~~e~~~~--------------~~~~g~~~~~GGaG~vl  233 (317)
                      .+++++++.|+|+.+..+-|.++++.+. |+-.    +|.|.+.++...              ....+.+++.| +.+++
T Consensus        30 a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~G-~~m~~  108 (175)
T PF13506_consen   30 AKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPARGFWSRLEAAFFNFLPGVLQALGGAPFAWG-GSMAF  108 (175)
T ss_pred             CCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCcCHHHHHHHHHHhHHHHHHHHhcCCCceec-ceeee
Confidence            5799999999999999999999988773 4433    333443332210              00123345654 55999


Q ss_pred             cHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          234 SHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       234 Sr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      .+++++++... +.    .....+||..+|+.+++.|.++...+
T Consensus       109 rr~~L~~~GG~-~~----l~~~ladD~~l~~~~~~~G~~v~~~~  147 (175)
T PF13506_consen  109 RREALEEIGGF-EA----LADYLADDYALGRRLRARGYRVVLSP  147 (175)
T ss_pred             EHHHHHHcccH-HH----HhhhhhHHHHHHHHHHHCCCeEEEcc
Confidence            99999886421 11    12345799999999999998877665

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=95.08  E-value=2.2  Score=41.71  Aligned_cols=96  Identities=15%  Similarity=0.150  Sum_probs=59.2

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCCC-CeEEeecC---CCCcc--------------------c-cccccccccc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDR-WFYVGSNS---EGYEQ--------------------N-AKHSFGMAFG  227 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~-p~yiG~~~---e~~~~--------------------~-~~~g~~~~~G  227 (317)
                      ++.+|+++.|+|+.+..+.|.++++.+.... .+.-|.+.   +....                    . .......+ -
T Consensus       132 ~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  210 (384)
T TIGR03469       132 PPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRCESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAA-A  210 (384)
T ss_pred             CCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccCCCHHHHHHHHHHHHHHHHhcchhhhcCCCccceee-c
Confidence            4489999999999999888888887664322 33222221   11000                    0 00000112 3


Q ss_pred             CccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcce
Q 021089          228 GGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLT  274 (317)
Q Consensus       228 GaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt  274 (317)
                      |+++++++++.+++-...+..     ....||..+++-+++.|.++.
T Consensus       211 G~~~lirr~~~~~vGGf~~~~-----~~~~ED~~L~~r~~~~G~~v~  252 (384)
T TIGR03469       211 GGCILIRREALERIGGIAAIR-----GALIDDCTLAAAVKRSGGRIW  252 (384)
T ss_pred             ceEEEEEHHHHHHcCCHHHHh-----hCcccHHHHHHHHHHcCCcEE
Confidence            678999999999986542211     124599999999998875543

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>PRK11204 N-glycosyltransferase; Provisional

Probab=95.03  E-value=0.93  Score=44.53  Aligned_cols=98  Identities=15%  Similarity=0.049  Sum_probs=62.4

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccC--CCCCCeEEeecCC--CC-----cc--------------cccccccccccCc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSE--GY-----EQ--------------NAKHSFGMAFGGG  229 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~--d~~~p~yiG~~~e--~~-----~~--------------~~~~g~~~~~GGa  229 (317)
                      .+.+|+++.|+|+.+..+.|.++++.+  |++-...-|.+.-  ..     .+              ....+..++.+|+
T Consensus       133 a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  212 (420)
T PRK11204        133 ARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRSTLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGV  212 (420)
T ss_pred             cCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccchhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecce
Confidence            468999999999999999999998887  4432233333210  00     00              0111212344678


Q ss_pred             cccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       230 G~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      +.++.+++++++..- ++      ....||..++.-+.+.|.++.-.|
T Consensus       213 ~~~~rr~~l~~vgg~-~~------~~~~ED~~l~~rl~~~G~~i~~~p  253 (420)
T PRK11204        213 ITAFRKSALHEVGYW-ST------DMITEDIDISWKLQLRGWDIRYEP  253 (420)
T ss_pred             eeeeeHHHHHHhCCC-CC------CcccchHHHHHHHHHcCCeEEecc
Confidence            889999998886431 11      134699999999888887765444

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.74  E-value=0.072  Score=43.94  Aligned_cols=85  Identities=19%  Similarity=0.167  Sum_probs=59.8

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCCCC-eEEeecCCCCcccccccccccccCccccccHHHHHHHHHhhhhhhhh
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRW-FYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMR  251 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p-~yiG~~~e~~~~~~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~  251 (317)
                      -+.+|++++|||.++..+.+.+++..+..... ..+|..               ..|+++++++++++++..-.+.+   
T Consensus        73 ~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~---  134 (166)
T cd04186          73 AKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK---------------VSGAFLLVRREVFEEVGGFDEDF---  134 (166)
T ss_pred             CCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc---------------CceeeEeeeHHHHHHcCCCChhh---
Confidence            36899999999999998888888876543322 233332               35788999999999875322222   


Q ss_pred             cccCCcchHHHHHHHHHhCCcceeCC
Q 021089          252 YAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       252 ~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                        ..+++|..+...+.+.|.++...|
T Consensus       135 --~~~~eD~~~~~~~~~~g~~i~~~~  158 (166)
T cd04186         135 --FLYYEDVDLCLRARLAGYRVLYVP  158 (166)
T ss_pred             --hccccHHHHHHHHHHcCCeEEEcc
Confidence              125689999988888887776544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=94.17  E-value=2.1  Score=41.66  Aligned_cols=99  Identities=18%  Similarity=0.181  Sum_probs=62.8

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCC-CCCCeEEeecC----CCCcc-------c----------cc-ccccccccCc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNS----EGYEQ-------N----------AK-HSFGMAFGGG  229 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d-~~~p~yiG~~~----e~~~~-------~----------~~-~g~~~~~GGa  229 (317)
                      .+.+|+++.|+|+.+..+-|.++++.+. ++....-|...    .+...       +          .. ....++ .|+
T Consensus       125 a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~G~  203 (373)
T TIGR03472       125 ARHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGRPVPGFWSRLGAMGINHNFLPSVMVARALGRARFC-FGA  203 (373)
T ss_pred             ccCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCCCCCCHHHHHHHHHhhhhhhHHHHHHHhccCCccc-cCh
Confidence            5789999999999999999999988874 33333323211    11000       0          00 011123 467


Q ss_pred             cccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       230 G~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      .+++.|++++++... +.    ......||..++.-+.+.|.++...+
T Consensus       204 ~~a~RR~~l~~iGGf-~~----~~~~~~ED~~l~~~i~~~G~~v~~~~  246 (373)
T TIGR03472       204 TMALRRATLEAIGGL-AA----LAHHLADDYWLGELVRALGLRVVLAP  246 (373)
T ss_pred             hhheeHHHHHHcCCh-HH----hcccchHHHHHHHHHHHcCCeEEecc
Confidence            789999999987653 21    11234599999999998887765443

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=93.92  E-value=0.14  Score=44.74  Aligned_cols=86  Identities=17%  Similarity=0.180  Sum_probs=60.8

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccC-CCCCCeEEeecCCCCcccccccccccccCccccccHHHHHHHHHhhhhhhhh
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY-DDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMR  251 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~-d~~~p~yiG~~~e~~~~~~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~  251 (317)
                      ...+|+++.|+|+.+..+-|.++++.+ ++.-....|.               +..|++.++.+++++++..- +.    
T Consensus        85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~---------------~~~g~~~~~r~~~~~~~ggf-~~----  144 (196)
T cd02520          85 ARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL---------------CAFGKSMALRREVLDAIGGF-EA----  144 (196)
T ss_pred             CCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee---------------cccCceeeeEHHHHHhccCh-HH----
Confidence            468999999999999888888888775 3332233332               23478899999999987543 21    


Q ss_pred             cccCCcchHHHHHHHHHhCCcceeCCC
Q 021089          252 YAHLYGSDARVFSCLVELGVGLTPEPG  278 (317)
Q Consensus       252 ~~~~~~~D~~lg~Cl~~lGV~lt~~~~  278 (317)
                      ......+|..++.-+.+.|.++...|.
T Consensus       145 ~~~~~~eD~~l~~rl~~~G~~i~~~~~  171 (196)
T cd02520         145 FADYLAEDYFLGKLIWRLGYRVVLSPY  171 (196)
T ss_pred             HhHHHHHHHHHHHHHHHcCCeEEEcch
Confidence            111235899999999888887765543

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=93.65  E-value=2.3  Score=37.55  Aligned_cols=103  Identities=17%  Similarity=0.084  Sum_probs=60.8

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeec-C--C---CCc----c-------------cccccccccccCc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSN-S--E---GYE----Q-------------NAKHSFGMAFGGG  229 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~-~--e---~~~----~-------------~~~~g~~~~~GGa  229 (317)
                      .+.+|++++|+|+.+..+.|.+++..++..+--.+|.. .  .   ...    .             ....+--++..|+
T Consensus        76 a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  155 (235)
T cd06434          76 VTTDIVVLLDSDTVWPPNALPEMLKPFEDPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGR  155 (235)
T ss_pred             hCCCEEEEECCCceeChhHHHHHHHhccCCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCc
Confidence            46899999999999999999999988852222222221 1  0   000    0             0011111234566


Q ss_pred             cccccHHHHHHHHHhhh---hhhhhcccCCcchHHHHHHHHHhCCccee
Q 021089          230 GFAISHSLARVLAGALD---SCLMRYAHLYGSDARVFSCLVELGVGLTP  275 (317)
Q Consensus       230 G~vlSr~ll~~L~~~~d---~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~  275 (317)
                      ..++.++++++......   ++.-......+||..++.=+.+.|.++.-
T Consensus       156 ~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~  204 (235)
T cd06434         156 TAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVY  204 (235)
T ss_pred             HHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEE
Confidence            67888888887643211   22211223456899998888777776543

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=93.20  E-value=3.6  Score=36.30  Aligned_cols=100  Identities=17%  Similarity=0.070  Sum_probs=57.8

Q ss_pred             CCccEEEEEcCCccccHHHHHHHH---ccCCCCCCe-EEeecCCC-C-------ccccc----------ccc--cccccC
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTL---SKYDDDRWF-YVGSNSEG-Y-------EQNAK----------HSF--GMAFGG  228 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L---~~~d~~~p~-yiG~~~e~-~-------~~~~~----------~g~--~~~~GG  228 (317)
                      .+++|+++.|||+.+..+.|.+++   ..+...... ..|..... .       .....          ...  .....|
T Consensus        74 ~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
T cd02526          74 NGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLIT  153 (237)
T ss_pred             CCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccceeccCccceecccccCCceEeeeeec
Confidence            478999999999999988888885   333222222 22221100 0       00000          000  011236


Q ss_pred             ccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          229 GGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       229 aG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      +|.++++++++++....+..     ...++|..+..-+.+.|..+...|
T Consensus       154 ~~~~~rr~~~~~~ggfd~~~-----~~~~eD~d~~~r~~~~G~~~~~~~  197 (237)
T cd02526         154 SGSLISLEALEKVGGFDEDL-----FIDYVDTEWCLRARSKGYKIYVVP  197 (237)
T ss_pred             cceEEcHHHHHHhCCCCHHH-----cCccchHHHHHHHHHcCCcEEEEc
Confidence            78899999999876432221     123479999888888887765443

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PLN03181 glycosyltransferase; Provisional

Probab=93.07  E-value=0.35  Score=48.03  Aligned_cols=56  Identities=23%  Similarity=0.290  Sum_probs=37.2

Q ss_pred             chhhHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeec
Q 021089          152 LRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSN  210 (317)
Q Consensus       152 ~~~a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~  210 (317)
                      .+..|....+++.+...+   |+++||..+|-|+++-=.++.--|.+|+.-.-+..|.+
T Consensus       179 ~p~~WaKipalRaAM~a~---PeAEWfWWLDsDALIMNp~~sLPl~ry~~~NLvvhg~p  234 (453)
T PLN03181        179 MNSYWAKLPVVRAAMLAH---PEAEWIWWVDSDAVFTDMDFKLPLHRYRDHNLVVHGWP  234 (453)
T ss_pred             CchhhhHHHHHHHHHHHC---CCceEEEEecCCceeecCCCCCCHhhcCCccccccCCc
Confidence            345787778888866654   99999999999999873332223556654333333444

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=92.90  E-value=4.2  Score=40.61  Aligned_cols=98  Identities=12%  Similarity=-0.032  Sum_probs=63.7

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccC--CCCCCeEEeecCC----CC-c--c---c-----------ccccccccccCc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSE----GY-E--Q---N-----------AKHSFGMAFGGG  229 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~--d~~~p~yiG~~~e----~~-~--~---~-----------~~~g~~~~~GGa  229 (317)
                      .+.+++++.|+|+.+..+.|.++++.+  |++-...-|.+..    .. .  +   .           ..+|-.++.+|+
T Consensus       154 a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~  233 (444)
T PRK14583        154 ARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGV  233 (444)
T ss_pred             CCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCc
Confidence            568999999999999999998888776  4433333333210    00 0  0   0           112223455688


Q ss_pred             cccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       230 G~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      +.++.+.+++++....       .....||..++.-+...|.++..+|
T Consensus       234 ~~~~rr~al~~vGg~~-------~~~i~ED~dl~~rl~~~G~~i~~~p  274 (444)
T PRK14583        234 VAAFRRRALADVGYWS-------PDMITEDIDISWKLQLKHWSVFFEP  274 (444)
T ss_pred             eeEEEHHHHHHcCCCC-------CCcccccHHHHHHHHHcCCeEEEee
Confidence            8889999988864321       1234699999999998888766555

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=92.84  E-value=0.38  Score=42.31  Aligned_cols=87  Identities=23%  Similarity=0.292  Sum_probs=51.2

Q ss_pred             hhHHHHHHHHHHHHhccccCCccEEEEEcCCccccHH---HHHHHHccCCCCCCeEEeecCC------------------
Q 021089          154 SAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVD---NLVKTLSKYDDDRWFYVGSNSE------------------  212 (317)
Q Consensus       154 ~a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~---nL~~~L~~~d~~~p~yiG~~~e------------------  212 (317)
                      |+..+..+.+.+.+     .+.++.++.|||.++..+   .|.+.++..+...-+++|....                  
T Consensus        70 C~lSH~~~w~~~v~-----~~~~~~lIlEDDv~~~~~f~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~  144 (200)
T PF01755_consen   70 CALSHIKAWQRIVD-----SGLEYALILEDDVIFDPDFKEFLEEILSHIPDWDFLRLGGWKDNSYSPGDIFLSRLSTFLS  144 (200)
T ss_pred             ehhhHHHHHHHHHH-----cCCCeEEEEeccccccccHHHHHHHHHhhcccccchhhccccccccccccccceeeeehhh
Confidence            56666677777775     578999999999998833   2333333322222333322110                  


Q ss_pred             CCcc--cc----------cccccccccCccccccHHHHHHHHHhh
Q 021089          213 GYEQ--NA----------KHSFGMAFGGGGFAISHSLARVLAGAL  245 (317)
Q Consensus       213 ~~~~--~~----------~~g~~~~~GGaG~vlSr~ll~~L~~~~  245 (317)
                      ....  ..          .....+..|.+||++|+.++++|....
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~aY~Is~~gA~kLL~~~  189 (200)
T PF01755_consen  145 RSKRYKRKPIPPFGSRKLIRPAKYPYGTCAYLISRKGARKLLEAS  189 (200)
T ss_pred             hhhhcccCcccccCCceEEeecCCCCcceeeeeCHHHHHHHHHhC
Confidence            0000  00          001124667889999999999999863

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=92.37  E-value=1.1  Score=41.26  Aligned_cols=97  Identities=13%  Similarity=0.047  Sum_probs=53.4

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCC--CCeEEeecC-C--C---Cc---c----------cccccc--cccccCc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDD--RWFYVGSNS-E--G---YE---Q----------NAKHSF--GMAFGGG  229 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~--~p~yiG~~~-e--~---~~---~----------~~~~g~--~~~~GGa  229 (317)
                      .+.+|++++|||+.+..+.|.++++.++..  .-..+|... .  .   ..   .          ......  .-...++
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  151 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISS  151 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCceeecccceeeecccccCCceeccEEEcC
Confidence            478999999999999987777777655432  223333211 0  0   00   0          000000  0012357


Q ss_pred             cccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcce
Q 021089          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLT  274 (317)
Q Consensus       230 G~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt  274 (317)
                      |.++++++++++.. +++-   +. .+.+|..+..=+.+.|.++.
T Consensus       152 g~li~~~~~~~iG~-fde~---~f-i~~~D~e~~~R~~~~G~~i~  191 (281)
T TIGR01556       152 GCLITREVYQRLGM-MDEE---LF-IDHVDTEWSLRAQNYGIPLY  191 (281)
T ss_pred             cceeeHHHHHHhCC-ccHh---hc-ccchHHHHHHHHHHCCCEEE
Confidence            78999999998754 2221   11 12367766444455676544

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=91.69  E-value=0.19  Score=49.33  Aligned_cols=43  Identities=33%  Similarity=0.409  Sum_probs=31.1

Q ss_pred             CCCCCCcEEEE-EecCCCchHHHHHHHHHHhCCCCCeEEEEecC
Q 021089           78 NPLTRRHLLFS-IASSSSSWPRRRSYVRLWYSPNSTRALTFLDR  120 (317)
Q Consensus        78 ~~~~~~~I~f~-I~Ts~~~~~~R~~~i~~ww~~~~~~~~vfsD~  120 (317)
                      ...+..++++| +.++...+..|-..+.-||.....+....++.
T Consensus        67 ~~~~i~~~~~g~~~~s~~~~l~r~~~v~cwv~t~~~~~~~~~~~  110 (364)
T KOG2246|consen   67 LTTDILHLVFGIIASSIALWLSRSGRVLCWVLTSPMRHVTRADA  110 (364)
T ss_pred             cccchhhhccCCccccchhccCCCceEEEEEEecCcCceeehhh
Confidence            56788899999 77777777667677777777655666666654

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=91.20  E-value=0.39  Score=42.37  Aligned_cols=105  Identities=23%  Similarity=0.284  Sum_probs=57.8

Q ss_pred             HHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccC-CCCCCeEEeecC-CC-----------C---c------ccc
Q 021089          161 VVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY-DDDRWFYVGSNS-EG-----------Y---E------QNA  218 (317)
Q Consensus       161 ~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~-d~~~p~yiG~~~-e~-----------~---~------~~~  218 (317)
                      .+.+..+.    -+.+|++++|||+.+..+-|.++++.+ +++-...-|... ..           .   .      ...
T Consensus        77 a~n~~~~~----~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (228)
T PF13641_consen   77 ALNEALAA----ARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFRSGRR  152 (228)
T ss_dssp             HHHHHHHH-------SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCEEEE-TT--S-EETTTS-TT-B
T ss_pred             HHHHHHHh----cCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhhhhhc
Confidence            44455543    348999999999999988888888877 554333333321 00           0   0      001


Q ss_pred             cccccccccCccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          219 KHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       219 ~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      ..+. .+..|+++++.+++++++.. ++.      ...++|..++.-+...|.++...|
T Consensus       153 ~~~~-~~~~G~~~~~rr~~~~~~g~-fd~------~~~~eD~~l~~r~~~~G~~~~~~~  203 (228)
T PF13641_consen  153 ALGV-AFLSGSGMLFRRSALEEVGG-FDP------FILGEDFDLCLRLRAAGWRIVYAP  203 (228)
T ss_dssp             -----S-B--TEEEEEHHHHHHH-S---S------SSSSHHHHHHHHHHHTT--EEEEE
T ss_pred             ccce-eeccCcEEEEEHHHHHHhCC-CCC------CCcccHHHHHHHHHHCCCcEEEEC
Confidence            1222 22347999999999999864 222      234599999999988888866543

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=90.92  E-value=0.45  Score=39.33  Aligned_cols=51  Identities=22%  Similarity=0.370  Sum_probs=41.8

Q ss_pred             hhHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcccccccccccccCccccc
Q 021089          154 SAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAI  233 (317)
Q Consensus       154 ~a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~~~~~~g~~~~~GGaG~vl  233 (317)
                      |+..+..+.+.+.+     .+.+|.++.|||..+..+                                    |.+||++
T Consensus        67 C~lSH~~~w~~~~~-----~~~~~alIlEDDv~~~~~------------------------------------~~~~Y~v  105 (128)
T cd06532          67 CFLSHYKLWQKIVE-----SNLEYALILEDDAILDPD------------------------------------GTAGYLV  105 (128)
T ss_pred             HHHHHHHHHHHHHH-----cCCCeEEEEccCcEECCC------------------------------------CceEEEe
Confidence            55566667777765     567999999999998877                                    6789999


Q ss_pred             cHHHHHHHHHhh
Q 021089          234 SHSLARVLAGAL  245 (317)
Q Consensus       234 Sr~ll~~L~~~~  245 (317)
                      |+.++++|....
T Consensus       106 s~~~A~~ll~~~  117 (128)
T cd06532         106 SRKGAKKLLAAL  117 (128)
T ss_pred             CHHHHHHHHHhC
Confidence            999999999864

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=90.89  E-value=0.66  Score=40.15  Aligned_cols=85  Identities=24%  Similarity=0.305  Sum_probs=58.1

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCC-CCCCeEEeecCCCCcccccccccccccCccccccHHHHHHHHHhhhhhhhh
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMR  251 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d-~~~p~yiG~~~e~~~~~~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~  251 (317)
                      .+.+|+++.|||+.+..+.|.++++.+. +.-.++.|....      ..+     .++|.++.+.+++++.- .+.   .
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~------~~~-----~~~~~~~~~~~~~~~g~-~~~---~  142 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLD------PDG-----SFVGVLISRRVVEKIGL-PDK---E  142 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEc------CCC-----ceEEEEEeHHHHHHhCC-CCh---h
Confidence            5789999999999999888888887765 333344443321      111     35678999999988742 111   1


Q ss_pred             cccCCcchHHHHHHHHHhCCcc
Q 021089          252 YAHLYGSDARVFSCLVELGVGL  273 (317)
Q Consensus       252 ~~~~~~~D~~lg~Cl~~lGV~l  273 (317)
                      + ..+++|..+..=+.+.|..+
T Consensus       143 ~-~~~~eD~~~~~r~~~~G~~i  163 (202)
T cd04185         143 F-FIWGDDTEYTLRASKAGPGI  163 (202)
T ss_pred             h-hccchHHHHHHHHHHcCCcE
Confidence            1 24568999988888888776

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=90.53  E-value=9  Score=37.33  Aligned_cols=176  Identities=17%  Similarity=0.089  Sum_probs=102.3

Q ss_pred             CCcEEEEEecCCCchHHHHHHHHHHhCCCCC--eEEEEecCCCCC----CCCCCCCC-CceeecCCCCCCccCCCCCchh
Q 021089           82 RRHLLFSIASSSSSWPRRRSYVRLWYSPNST--RALTFLDRAADS----SSAGDPSL-PRIVISADTSKFPFTFPKGLRS  154 (317)
Q Consensus        82 ~~~I~f~I~Ts~~~~~~R~~~i~~ww~~~~~--~~~vfsD~~~~~----~~~~~~~l-p~v~i~~d~~~~~y~~~~g~~~  154 (317)
                      ...+-+.|.+-.+..+.-...++.-.+.+-+  ++.++.|..+++    ..+..... |.+.+....     ....|+..
T Consensus        53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~gK~~  127 (439)
T COG1215          53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPE-----KKNGGKAG  127 (439)
T ss_pred             CCceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEecc-----ccCccchH
Confidence            4677777777766554444455555555444  455555644332    11112222 344443100     01123322


Q ss_pred             hHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCe-EEeecC-------CCC-c----------
Q 021089          155 AVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWF-YVGSNS-------EGY-E----------  215 (317)
Q Consensus       155 a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~-yiG~~~-------e~~-~----------  215 (317)
                      +      +......    ...+++++.|.|+....+.|++++..++..... +.|.+.       +.. .          
T Consensus       128 a------l~~~l~~----~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~  197 (439)
T COG1215         128 A------LNNGLKR----AKGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSA  197 (439)
T ss_pred             H------HHHHHhh----cCCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCChhhhcchhcchhhhhh
Confidence            2      2222221    459999999999999999999999998755443 666551       110 0          


Q ss_pred             ------ccccccccccccCccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCCCC
Q 021089          216 ------QNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGF  279 (317)
Q Consensus       216 ------~~~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~f  279 (317)
                            .....|.....+|++.++-+++++++....       +....||..++.-+...|.+....+.-
T Consensus       198 ~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~-------~~~i~ED~~lt~~l~~~G~~~~~~~~~  260 (439)
T COG1215         198 FYFRLRAASKGGLISFLSGSSSAFRRSALEEVGGWL-------EDTITEDADLTLRLHLRGYRVVYVPEA  260 (439)
T ss_pred             HHHhhhhhhhcCCeEEEcceeeeEEHHHHHHhCCCC-------CCceeccHHHHHHHHHCCCeEEEeecc
Confidence                  011223234567899999999999987322       223469999999999888776654443

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=90.06  E-value=0.82  Score=39.44  Aligned_cols=95  Identities=19%  Similarity=0.167  Sum_probs=59.5

Q ss_pred             EEEEEcCCccccHHHHHHHHccCC-CCCCeEEeecC----CCC---cc--------------cccccccccccCcccccc
Q 021089          177 WFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNS----EGY---EQ--------------NAKHSFGMAFGGGGFAIS  234 (317)
Q Consensus       177 Wf~~~DDDTyv~~~nL~~~L~~~d-~~~p~yiG~~~----e~~---~~--------------~~~~g~~~~~GGaG~vlS  234 (317)
                      |+++.|+||-+..+-|.+++..++ |+-...-|...    .+.   .+              ....+.....-|+|.+++
T Consensus         1 ~v~~~DaDt~~~~d~l~~~~~~~~~~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~r   80 (193)
T PF13632_consen    1 YVLFLDADTRLPPDFLERLVAALEDPKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGMLFR   80 (193)
T ss_pred             CEEEEcCCCCCChHHHHHHHHHHhCCCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCcceeee
Confidence            899999999999998888887776 22222222211    110   00              011222223458999999


Q ss_pred             HHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          235 HSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       235 r~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      +++++++..-.+      ....+||..++.=+.+.|.++...|
T Consensus        81 ~~~l~~vg~~~~------~~~~~ED~~l~~~l~~~G~~~~~~~  117 (193)
T PF13632_consen   81 REALREVGGFDD------PFSIGEDMDLGFRLRRAGYRIVYVP  117 (193)
T ss_pred             HHHHHHhCcccc------cccccchHHHHHHHHHCCCEEEEec
Confidence            999998753210      1245699999988888887765543

>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase

Probab=89.42  E-value=0.37  Score=49.29  Aligned_cols=33  Identities=24%  Similarity=0.291  Sum_probs=25.0

Q ss_pred             hhhhhhhhcccCCcchHHHHHHHHH-hCCcceeCC
Q 021089          244 ALDSCLMRYAHLYGSDARVFSCLVE-LGVGLTPEP  277 (317)
Q Consensus       244 ~~d~C~~~~~~~~~~D~~lg~Cl~~-lGV~lt~~~  277 (317)
                      ++++|.+... ...+|+.||+|+.+ +||+|+.+.
T Consensus         1 hl~~C~~~~~-s~~~Dv~lGRCI~~~~gi~Ct~~~   34 (499)
T PF05679_consen    1 HLDWCLKNIY-SNHEDVELGRCIKKFTGISCTWSY   34 (499)
T ss_pred             ChhHHhhhcC-CCCchhHHHHHHHHhcCCCeeecc
Confidence            4678986432 23489999999986 899998763

Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=89.36  E-value=0.74  Score=40.49  Aligned_cols=95  Identities=17%  Similarity=0.111  Sum_probs=60.4

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCCCC-eEEeec-C----CCC---cc--------------c--cccccccccc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRW-FYVGSN-S----EGY---EQ--------------N--AKHSFGMAFG  227 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p-~yiG~~-~----e~~---~~--------------~--~~~g~~~~~G  227 (317)
                      .+.+|++++|+|+++..+.|.++++.++.+.. -.++.. .    ...   ..              .  ...+..++ .
T Consensus        83 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  161 (234)
T cd06421          83 TTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFC-C  161 (234)
T ss_pred             CCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCcee-c
Confidence            46899999999999999888888887764332 223221 0    000   00              0  00112223 4


Q ss_pred             CccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCccee
Q 021089          228 GGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTP  275 (317)
Q Consensus       228 GaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~  275 (317)
                      |+|.++++.+++++... ++      ..+.+|..++.=+...|..+..
T Consensus       162 g~~~~~r~~~~~~ig~~-~~------~~~~eD~~l~~r~~~~g~~i~~  202 (234)
T cd06421         162 GSGAVVRREALDEIGGF-PT------DSVTEDLATSLRLHAKGWRSVY  202 (234)
T ss_pred             CceeeEeHHHHHHhCCC-Cc------cceeccHHHHHHHHHcCceEEE
Confidence            68899999999987542 21      2346899999888787776554

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=88.30  E-value=3.5  Score=35.96  Aligned_cols=101  Identities=17%  Similarity=0.109  Sum_probs=65.3

Q ss_pred             CccEEEEEcCCccccHHHHHHHHcc-CCCCCCeEEeecCCCCcc-----c---------------ccccccccc-cCccc
Q 021089          174 GVRWFVFGDDDTVFFVDNLVKTLSK-YDDDRWFYVGSNSEGYEQ-----N---------------AKHSFGMAF-GGGGF  231 (317)
Q Consensus       174 ~~kWf~~~DDDTyv~~~nL~~~L~~-~d~~~p~yiG~~~e~~~~-----~---------------~~~g~~~~~-GGaG~  231 (317)
                      ..+|++++|+|....++.|.++++. .+....+.+|........     .               ...+..+.. ..+..
T Consensus        82 ~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~g~~  161 (211)
T cd04188          82 RGDYILFADADLATPFEELEKLEEALKTSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFLVRLLLGLGIKDTQCGFK  161 (211)
T ss_pred             cCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeeccCCcccccccHHHHHHHHHHHHHHHHHcCCCCcccccCce
Confidence            3599999999999999999988887 455667888876422100     0               001111111 23447


Q ss_pred             cccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCCCCC
Q 021089          232 AISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPGFH  280 (317)
Q Consensus       232 vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~f~  280 (317)
                      ++++++++++.....      ...|..|..+..-+.+.|.++...|--+
T Consensus       162 ~~~r~~~~~~~~~~~------~~~~~~d~el~~r~~~~g~~~~~vpi~~  204 (211)
T cd04188         162 LFTRDAARRLFPRLH------LERWAFDVELLVLARRLGYPIEEVPVRW  204 (211)
T ss_pred             eEcHHHHHHHHhhhh------ccceEeeHHHHHHHHHcCCeEEEcCcce
Confidence            899999988764321      1245568888777778888877766433

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

Probab=88.30  E-value=1.5  Score=38.97  Aligned_cols=98  Identities=16%  Similarity=0.030  Sum_probs=58.0

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecC------CCCc---c------------c--ccccccccccCc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS------EGYE---Q------------N--AKHSFGMAFGGG  229 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~------e~~~---~------------~--~~~g~~~~~GGa  229 (317)
                      .+.+|++++|+|+.+..+-|.+++..+...+--.++...      ....   +            .  ...+..+...|+
T Consensus        86 a~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  165 (232)
T cd06437          86 AKGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGT  165 (232)
T ss_pred             CCCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccc
Confidence            578999999999999988888865555332222232211      0000   0            0  001111123466


Q ss_pred             cccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       230 G~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      +.++.+++++++.. ++.      ..+.+|..+...+...|.++...|
T Consensus       166 ~~~~rr~~~~~vgg-~~~------~~~~ED~~l~~rl~~~G~~~~~~~  206 (232)
T cd06437         166 AGVWRKECIEDAGG-WNH------DTLTEDLDLSYRAQLKGWKFVYLD  206 (232)
T ss_pred             hhhhhHHHHHHhCC-CCC------CcchhhHHHHHHHHHCCCeEEEec
Confidence            67788888877643 222      124699999999988887765443

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=88.29  E-value=1.4  Score=38.32  Aligned_cols=94  Identities=16%  Similarity=0.105  Sum_probs=57.5

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCC-CCCeEEeecCCCC-c------c-------------cccccccccccCccc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDD-DRWFYVGSNSEGY-E------Q-------------NAKHSFGMAFGGGGF  231 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~-~~p~yiG~~~e~~-~------~-------------~~~~g~~~~~GGaG~  231 (317)
                      ...+|++++|+|+.+..+-|.+++..+.. ....+.|...... .      .             ....+..+...|+++
T Consensus        81 ~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  160 (229)
T cd04192          81 AKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANM  160 (229)
T ss_pred             hcCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceE
Confidence            46899999999999988888888876543 3445666542110 0      0             011222334457889


Q ss_pred             cccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCC
Q 021089          232 AISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGV  271 (317)
Q Consensus       232 vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV  271 (317)
                      ++++++++++..- +.    ......+|..++.-+...|.
T Consensus       161 ~~rr~~~~~~ggf-~~----~~~~~~eD~~~~~~~~~~g~  195 (229)
T cd04192         161 AYRKEAFFEVGGF-EG----NDHIASGDDELLLAKVASKY  195 (229)
T ss_pred             EEEHHHHHHhcCC-cc----ccccccCCHHHHHHHHHhCC
Confidence            9999999997542 11    01123467777665555555

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=88.14  E-value=1.3  Score=39.90  Aligned_cols=99  Identities=19%  Similarity=0.149  Sum_probs=63.0

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCC-CC-eEEeecCCCCc--c-------------------c--cccccccccc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDD-RW-FYVGSNSEGYE--Q-------------------N--AKHSFGMAFG  227 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~-~p-~yiG~~~e~~~--~-------------------~--~~~g~~~~~G  227 (317)
                      ...+|++++|+|+.+..+.|.++++.+... .. .++|.......  +                   .  ...+...+.+
T Consensus        83 a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (241)
T cd06427          83 ARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLG  162 (241)
T ss_pred             cCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecC
Confidence            356999999999999999998888877532 22 34433210000  0                   0  0112223457


Q ss_pred             CccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCCC
Q 021089          228 GGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPG  278 (317)
Q Consensus       228 GaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~  278 (317)
                      |++.++++++++++... +.      ..+.+|..++.=+...|..+...+.
T Consensus       163 g~~~~~rr~~~~~vgg~-~~------~~~~eD~~l~~rl~~~G~r~~~~~~  206 (241)
T cd06427         163 GTSNHFRTDVLRELGGW-DP------FNVTEDADLGLRLARAGYRTGVLNS  206 (241)
T ss_pred             CchHHhhHHHHHHcCCC-Cc------ccchhhHHHHHHHHHCCceEEEecc
Confidence            88899999999887542 11      1245899988888777877665443

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2

Probab=87.24  E-value=1  Score=34.77  Aligned_cols=85  Identities=19%  Similarity=0.302  Sum_probs=43.3

Q ss_pred             HHHHHHhCC----CCCeEEEEecCCCCCCCCCCCCCCceeecCCCCCCccCCCCCchhhHHHHHHHHHHHHhccccCCcc
Q 021089          101 SYVRLWYSP----NSTRALTFLDRAADSSSAGDPSLPRIVISADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVR  176 (317)
Q Consensus       101 ~~i~~ww~~----~~~~~~vfsD~~~~~~~~~~~~lp~v~i~~d~~~~~y~~~~g~~~a~r~~~~l~~~~~~~~~~~~~k  176 (317)
                      +.+..|+..    ...+++|+.+..++...++-..++.+.+.....  .+      +...+-......+.+..   .+.+
T Consensus         5 ~~L~~wl~~~~~lG~d~i~i~d~~s~D~t~~~l~~~~~v~i~~~~~--~~------~~~~~~~~~~~~~~~~~---~~~d   73 (97)
T PF13704_consen    5 DYLPEWLAHHLALGVDHIYIYDDGSTDGTREILRALPGVGIIRWVD--PY------RDERRQRAWRNALIERA---FDAD   73 (97)
T ss_pred             HHHHHHHHHHHHcCCCEEEEEECCCCccHHHHHHhCCCcEEEEeCC--Cc------cchHHHHHHHHHHHHhC---CCCC
Confidence            345555443    257888887765443222223445555432111  11      00011111222333322   5799


Q ss_pred             EEEEEcCCccccHHH----HHHHH
Q 021089          177 WFVFGDDDTVFFVDN----LVKTL  196 (317)
Q Consensus       177 Wf~~~DDDTyv~~~n----L~~~L  196 (317)
                      |.+++|-|-|+..+.    |.++|
T Consensus        74 Wvl~~D~DEfl~~~~~~~~l~~~L   97 (97)
T PF13704_consen   74 WVLFLDADEFLVPPPGRRSLRDFL   97 (97)
T ss_pred             EEEEEeeeEEEecCCCCCCHHHhC
Confidence            999999999998544    55543

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=86.94  E-value=1.3  Score=38.00  Aligned_cols=95  Identities=16%  Similarity=0.182  Sum_probs=56.8

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCC--CCCCeEEeecCC----CC--c-c-----c------ccccccccccCcccc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD--DDRWFYVGSNSE----GY--E-Q-----N------AKHSFGMAFGGGGFA  232 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d--~~~p~yiG~~~e----~~--~-~-----~------~~~g~~~~~GGaG~v  232 (317)
                      .+.+|++++|+|.++..+.|.+++..+.  ++-.++.|....    +.  . .     .      ....  -...|++++
T Consensus        79 a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  156 (201)
T cd04195          79 CTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRRLPTSHDDILKFARRR--SPFNHPTVM  156 (201)
T ss_pred             cCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeeccccCCCCHHHHHHHhccC--CCCCChHHh
Confidence            4689999999999999888888887663  333344443211    00  0 0     0      0011  122355677


Q ss_pred             ccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeC
Q 021089          233 ISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPE  276 (317)
Q Consensus       233 lSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~  276 (317)
                      +.+++++++... +.      ....+|..+...+...|.++...
T Consensus       157 ~rr~~~~~~g~~-~~------~~~~eD~~~~~r~~~~g~~~~~~  193 (201)
T cd04195         157 FRKSKVLAVGGY-QD------LPLVEDYALWARMLANGARFANL  193 (201)
T ss_pred             hhHHHHHHcCCc-CC------CCCchHHHHHHHHHHcCCceecc
Confidence            777777665321 11      14568999999988777665543

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis

Probab=86.90  E-value=1  Score=38.58  Aligned_cols=68  Identities=12%  Similarity=0.128  Sum_probs=45.7

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecC----CCCc----c--------------cccccccccccCcc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS----EGYE----Q--------------NAKHSFGMAFGGGG  230 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~----e~~~----~--------------~~~~g~~~~~GGaG  230 (317)
                      .+.+|+++.|.|+.+.++.|.+++..+........|...    +...    .              ....+......|+|
T Consensus        80 ~~~d~v~~~DaD~~~~p~~l~~l~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  159 (183)
T cd06438          80 DDPDAVVVFDADNLVDPNALEELNARFAAGARVVQAYYNSKNPDDSWITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTG  159 (183)
T ss_pred             CCCCEEEEEcCCCCCChhHHHHHHHHHhhCCCeeEEEEeeeCCccCHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecCch
Confidence            579999999999999999998888887655556566532    1100    0              00112223456888


Q ss_pred             ccccHHHHHH
Q 021089          231 FAISHSLARV  240 (317)
Q Consensus       231 ~vlSr~ll~~  240 (317)
                      ++++++++++
T Consensus       160 ~~~rr~~l~~  169 (183)
T cd06438         160 MCFPWAVLRQ  169 (183)
T ss_pred             hhhHHHHHHh
Confidence            8888888887

The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional

Probab=84.07  E-value=41  Score=32.31  Aligned_cols=99  Identities=15%  Similarity=0.169  Sum_probs=62.0

Q ss_pred             CccEEEEEcCCccccHHHHHHHHccC----CCCCCeEEeecCCCC-c-----c---------------cccccccccccC
Q 021089          174 GVRWFVFGDDDTVFFVDNLVKTLSKY----DDDRWFYVGSNSEGY-E-----Q---------------NAKHSFGMAFGG  228 (317)
Q Consensus       174 ~~kWf~~~DDDTyv~~~nL~~~L~~~----d~~~p~yiG~~~e~~-~-----~---------------~~~~g~~~~~GG  228 (317)
                      ..+|++++|.|+...++.+.+++..+    ++.-.+.+|...... .     .               ....+..+....
T Consensus       162 ~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~~~~~r~~~~~~~~~l~~~~~~~~i~D~~  241 (333)
T PTZ00260        162 RGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAKRKWYRNILMYGFHFIVNTICGTNLKDTQ  241 (333)
T ss_pred             cCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCcccccCcHHHHHHHHHHHHHHHHHcCCCcccCC
Confidence            46899999999998877766666544    345568899864210 0     0               001122334445


Q ss_pred             ccc-cccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCCC
Q 021089          229 GGF-AISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPG  278 (317)
Q Consensus       229 aG~-vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~  278 (317)
                      .|+ ++++.+++.+.+...      ...|.-|..+-..+...|.++...|-
T Consensus       242 ~Gfk~~~r~~~~~i~~~~~------~~~~~fd~Ell~~a~~~g~~I~EvPv  286 (333)
T PTZ00260        242 CGFKLFTRETARIIFPSLH------LERWAFDIEIVMIAQKLNLPIAEVPV  286 (333)
T ss_pred             CCeEEEeHHHHHHHhhhcc------ccCccchHHHHHHHHHcCCCEEEEce
Confidence            564 889999998865311      12344577777777778887776653

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine

Probab=83.77  E-value=2  Score=37.36  Aligned_cols=67  Identities=15%  Similarity=-0.009  Sum_probs=42.5

Q ss_pred             CccEEEEEcCCccccHHHHHHHHccCC-CCCCeEEeecC---CCC-c----------------cc--ccccccccccCcc
Q 021089          174 GVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNS---EGY-E----------------QN--AKHSFGMAFGGGG  230 (317)
Q Consensus       174 ~~kWf~~~DDDTyv~~~nL~~~L~~~d-~~~p~yiG~~~---e~~-~----------------~~--~~~g~~~~~GGaG  230 (317)
                      +.+|++++|.|+.+.++.|.+++..+. |.-...-|...   ... .                +.  ...+ ..+.||.|
T Consensus        89 ~~d~v~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~G~~  167 (191)
T cd06436          89 ERVIIAVIDADGRLDPNALEAVAPYFSDPRVAGTQSRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTG-TVGLGGNG  167 (191)
T ss_pred             CccEEEEECCCCCcCHhHHHHHHHhhcCCceEEEeeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cEEECCee
Confidence            458999999999999888888666554 32122222210   000 0                00  1123 24569999


Q ss_pred             ccccHHHHHHH
Q 021089          231 FAISHSLARVL  241 (317)
Q Consensus       231 ~vlSr~ll~~L  241 (317)
                      .++++++++++
T Consensus       168 ~~~r~~~l~~v  178 (191)
T cd06436         168 QFMRLSALDGL  178 (191)
T ss_pred             EEEeHHHHHHh
Confidence            99999999998

N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=83.55  E-value=4.1  Score=34.21  Aligned_cols=93  Identities=17%  Similarity=0.229  Sum_probs=58.5

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcccccccccccccCccccccHHHHHHHHHhhhhhhhhc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRY  252 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~~~~~~g~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~  252 (317)
                      ...+|+++.|+|+.+..+.|.++++..++. ....|........ ...   ....|+++++.+..+.++.. ++++.   
T Consensus        78 a~g~~i~~lD~D~~~~~~~l~~~~~~~~~~-~~v~g~~~~~~~~-~~~---~~~~~~~~~~~r~~~~~~gg-f~~~~---  148 (182)
T cd06420          78 AKGDYLIFIDGDCIPHPDFIADHIELAEPG-VFLSGSRVLLNEK-LTE---RGIRGCNMSFWKKDLLAVNG-FDEEF---  148 (182)
T ss_pred             hcCCEEEEEcCCcccCHHHHHHHHHHhCCC-cEEecceeecccc-cce---eEeccceEEEEHHHHHHhCC-CCccc---
Confidence            467999999999999888888888777443 3444554321111 111   23446778888888885443 33321   


Q ss_pred             ccCCcchHHHHHHHHHhCCcce
Q 021089          253 AHLYGSDARVFSCLVELGVGLT  274 (317)
Q Consensus       253 ~~~~~~D~~lg~Cl~~lGV~lt  274 (317)
                      .....+|..++.=+.+.|+...
T Consensus       149 ~~~~~eD~~l~~r~~~~g~~~~  170 (182)
T cd06420         149 TGWGGEDSELVARLLNSGIKFR  170 (182)
T ss_pred             ccCCcchHHHHHHHHHcCCcEE
Confidence            1112489999888888885543

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=83.46  E-value=4.6  Score=35.56  Aligned_cols=99  Identities=13%  Similarity=0.054  Sum_probs=57.7

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCC-CCCCeEEeecCC---CCc------------c-------cccccccccccCc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNSE---GYE------------Q-------NAKHSFGMAFGGG  229 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d-~~~p~yiG~~~e---~~~------------~-------~~~~g~~~~~GGa  229 (317)
                      .+.+|++++|||+.+...-|.++++.+. +......|....   ...            .       .......++..|+
T Consensus        80 a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (249)
T cd02525          80 SRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVH  159 (249)
T ss_pred             hCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccccc
Confidence            3689999999999998888888886553 333334343210   000            0       0000001234567


Q ss_pred             cccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       230 G~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      +.++++.+++++.. +++.   +  ...+|..++.=+.+.|..+...|
T Consensus       160 ~~~~~~~~~~~~g~-~~~~---~--~~~eD~~l~~r~~~~G~~~~~~~  201 (249)
T cd02525         160 HGAYRREVFEKVGG-FDES---L--VRNEDAELNYRLRKAGYKIWLSP  201 (249)
T ss_pred             cceEEHHHHHHhCC-CCcc---c--CccchhHHHHHHHHcCcEEEEcC
Confidence            78889999888643 2222   1  23488888766667777665443

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=82.31  E-value=7.4  Score=33.86  Aligned_cols=97  Identities=14%  Similarity=0.060  Sum_probs=56.3

Q ss_pred             CccEEEEEcCCccccHHHHHHHHcc-CCCCCCeEEeecCCCCc--c------------------c-ccccccccccCccc
Q 021089          174 GVRWFVFGDDDTVFFVDNLVKTLSK-YDDDRWFYVGSNSEGYE--Q------------------N-AKHSFGMAFGGGGF  231 (317)
Q Consensus       174 ~~kWf~~~DDDTyv~~~nL~~~L~~-~d~~~p~yiG~~~e~~~--~------------------~-~~~g~~~~~GGaG~  231 (317)
                      ..+|++++|+|..+..+.|.+++.. .++...+..|.......  .                  . ...+...+ .|+.+
T Consensus        78 ~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  156 (224)
T cd06442          78 RGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANLLARLLLGRKVSDP-TSGFR  156 (224)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEEeeeecCCccCCCcHHHHHHHHHHHHHHHHHcCCCCCCC-CCccc
Confidence            3589999999999998888888887 45555666775421100  0                  0 01121122 24556


Q ss_pred             cccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          232 AISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       232 vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      ++++++++++....+      ...+..|..+..-+.+.|..+...|
T Consensus       157 ~~~r~~~~~ig~~~~------~~~~~~~~~l~~~~~~~g~~i~~~p  196 (224)
T cd06442         157 AYRREVLEKLIDSLV------SKGYKFQLELLVRARRLGYRIVEVP  196 (224)
T ss_pred             hhhHHHHHHHhhhcc------CCCcEEeHHHHHHHHHcCCeEEEeC
Confidence            889999999872111      1233345544444456676655443

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=81.47  E-value=3.9  Score=36.53  Aligned_cols=36  Identities=19%  Similarity=0.192  Sum_probs=27.2

Q ss_pred             CccEEEEEcCCccccHHHHHHHHccCCCCC-CeEEee
Q 021089          174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDDR-WFYVGS  209 (317)
Q Consensus       174 ~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~-p~yiG~  209 (317)
                      ..+|++++|+|+.+..+-|.++++.+...+ .+..|.
T Consensus       109 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~  145 (251)
T cd06439         109 TGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGE  145 (251)
T ss_pred             CCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeE
Confidence            359999999999999888888888875333 344443

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=81.35  E-value=8.1  Score=33.10  Aligned_cols=92  Identities=21%  Similarity=0.218  Sum_probs=55.1

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHcc-CCCCCCeEEeecC----CC-C--c--cccccc-----------ccccccCccc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSK-YDDDRWFYVGSNS----EG-Y--E--QNAKHS-----------FGMAFGGGGF  231 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~-~d~~~p~yiG~~~----e~-~--~--~~~~~g-----------~~~~~GGaG~  231 (317)
                      .+.+|+++.|+|..+.++.|.++++. .......+++...    +. .  .  ......           ......|+++
T Consensus        78 ~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (214)
T cd04196          78 ADGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTSFNNLLFQNVVTGCTM  157 (214)
T ss_pred             CCCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccccccCCccCHHHHHHhCccCCcee
Confidence            57999999999999998888888876 3333333444321    00 0  0  000000           0113357889


Q ss_pred             cccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhC
Q 021089          232 AISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELG  270 (317)
Q Consensus       232 vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lG  270 (317)
                      ++.+++++++....+.      ..+.+|..+...+...|
T Consensus       158 ~~r~~~~~~~~~~~~~------~~~~~D~~~~~~~~~~~  190 (214)
T cd04196         158 AFNRELLELALPFPDA------DVIMHDWWLALLASAFG  190 (214)
T ss_pred             eEEHHHHHhhcccccc------ccccchHHHHHHHHHcC
Confidence            9999999887653111      12457888877776643

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=81.13  E-value=9.1  Score=34.40  Aligned_cols=99  Identities=14%  Similarity=-0.004  Sum_probs=59.2

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCC-CCCCeEEeecCCCCc------c---c------------ccccccccccCcc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD-DDRWFYVGSNSEGYE------Q---N------------AKHSFGMAFGGGG  230 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d-~~~p~yiG~~~e~~~------~---~------------~~~g~~~~~GGaG  230 (317)
                      ...+|+++.|+|..+.++.|.+++..+. ..-.+..|.......      .   .            ...+... ..|+-
T Consensus        92 a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d-~~g~~  170 (243)
T PLN02726         92 ASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSD-LTGSF  170 (243)
T ss_pred             cCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCc-CCCcc
Confidence            3578999999999999888888887663 345677776431110      0   0            0001111 22344


Q ss_pred             ccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCCC
Q 021089          231 FAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEPG  278 (317)
Q Consensus       231 ~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~~  278 (317)
                      .++++.+++.+....+.      ..|..|..+..=+...|.++...|-
T Consensus       171 ~~~rr~~~~~i~~~~~~------~~~~~~~el~~~~~~~g~~i~~vp~  212 (243)
T PLN02726        171 RLYKRSALEDLVSSVVS------KGYVFQMEIIVRASRKGYRIEEVPI  212 (243)
T ss_pred             cceeHHHHHHHHhhccC------CCcEEehHHHHHHHHcCCcEEEeCc
Confidence            57899999998653221      2344565554434457877776653

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=80.52  E-value=10  Score=33.46  Aligned_cols=97  Identities=16%  Similarity=0.061  Sum_probs=60.6

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCc--c----------c-----------ccccccccccCc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYE--Q----------N-----------AKHSFGMAFGGG  229 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~--~----------~-----------~~~g~~~~~GGa  229 (317)
                      .+.+|+++.|+|+.+..+.|.++++.+...+--.++.......  .          .           ......+ ..|+
T Consensus        83 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~  161 (236)
T cd06435          83 PDAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRNERNAII-QHGT  161 (236)
T ss_pred             CCCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHhccccccCceE-Eecc
Confidence            4589999999999999998998887775322223332210000  0          0           0000011 2467


Q ss_pred             cccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          230 GFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       230 G~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      +.++++++++++.. ++++      .+.||..++.=+.+.|.++...|
T Consensus       162 ~~~~rr~~~~~iGg-f~~~------~~~eD~dl~~r~~~~G~~~~~~~  202 (236)
T cd06435         162 MCLIRRSALDDVGG-WDEW------CITEDSELGLRMHEAGYIGVYVA  202 (236)
T ss_pred             eEEEEHHHHHHhCC-CCCc------cccchHHHHHHHHHCCcEEEEcc
Confidence            78999999999753 2332      24689999988888887765543

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=80.31  E-value=3.6  Score=35.19  Aligned_cols=99  Identities=13%  Similarity=0.083  Sum_probs=59.0

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCC--CCCCeEEeecCCC---C------cc---cccccccccccCccccccHHHH
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD--DDRWFYVGSNSEG---Y------EQ---NAKHSFGMAFGGGGFAISHSLA  238 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d--~~~p~yiG~~~e~---~------~~---~~~~g~~~~~GGaG~vlSr~ll  238 (317)
                      ...+|+++.|+|..+..+.|.++++.++  +.-.+..|.....   .      ..   .....+.....|++.++++.++
T Consensus        82 a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  161 (202)
T cd04184          82 ATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPFFKPDWSPDLLLSQNYIGHLLVYRRSLV  161 (202)
T ss_pred             hcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEeccccCCCCCHHHhhhcCCccceEeEEHHHH
Confidence            3579999999999999888888887763  3333443332110   0      00   0000111234566778899998


Q ss_pred             HHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeCC
Q 021089          239 RVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP  277 (317)
Q Consensus       239 ~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~~  277 (317)
                      +++..- ++.   +  ..++|..++.=+.+.|.++...|
T Consensus       162 ~~iggf-~~~---~--~~~eD~~l~~rl~~~g~~~~~~~  194 (202)
T cd04184         162 RQVGGF-REG---F--EGAQDYDLVLRVSEHTDRIAHIP  194 (202)
T ss_pred             HHhCCC-CcC---c--ccchhHHHHHHHHhccceEEEcc
Confidence            887532 221   1  13478887776767777766554

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	317
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	5e-27

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score =  106 bits (265), Expect = 5e-27
 Identities = 43/218 (19%), Positives = 69/218 (31%), Gaps = 27/218 (12%)

Query: 79  PLTRRHLLFSIASSSSSWPRRRSYV-RLWYSPNSTRALTFLDRAADSSSAGDPSLPRIVI 137
            L    +  ++ ++ +    R   +   W S    +   F D   +        L   ++
Sbjct: 9   ELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDERLQ---ERLGPHLV 65

Query: 138 SADTSKFPFTFPKGLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLS 197
               S          + A      +           G+RWF   DDD       L++ L 
Sbjct: 66  VTQCSAEHSHPALSCKMAAEFDAFLVS---------GLRWFCHVDDDNYVNPKALLQLLK 116

Query: 198 KYDDDRWFYVGSNS----------EGYEQNAKHSFGMAFGGGGFAISHSLARVLAGALDS 247
            +  DR  YVG  S          +  ++     F  A GG GF I+  LA  +      
Sbjct: 117 TFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFATGGAGFCINRQLALKMVPWASG 176

Query: 248 C--LMRYAHLYGSDARVFSCLVE--LGVGLTPEPGFHQ 281
              +   A +   D      ++E  LG  L P P FH 
Sbjct: 177 SHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHS 214

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	317
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	100.0
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	89.34
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	83.34

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=100.00  E-value=1e-33  Score=264.51  Aligned_cols=192  Identities=21%  Similarity=0.278  Sum_probs=136.5

Q ss_pred             CCCCCCCcEEEEEecCCCchHHHHHHHHHHhCCCCC-eEEEEecCCCCCCCCCCCCCCce----eecCCCCCCccCCCCC
Q 021089           77 ANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNST-RALTFLDRAADSSSAGDPSLPRI----VISADTSKFPFTFPKG  151 (317)
Q Consensus        77 ~~~~~~~~I~f~I~Ts~~~~~~R~~~i~~ww~~~~~-~~~vfsD~~~~~~~~~~~~lp~v----~i~~d~~~~~y~~~~g  151 (317)
                      +.+++.++|+|+|+|+++++.+|++++++||++.+. .++||+|.+++.       +|.+    .+..+.+. .|.. .+
T Consensus         7 ~~~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~-------l~~~~~~~~~~~~~~~-~~~~-~~   77 (280)
T 2j0a_A            7 PLELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDER-------LQERLGPHLVVTQCSA-EHSH-PA   77 (280)
T ss_dssp             --CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHH-------HHHHHGGGEEECCC---------C
T ss_pred             CCCCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCccc-------ccccccccceeccccc-cccc-cc
Confidence            457889999999999999999999999999997654 466799877432       2221    12222211 1111 11


Q ss_pred             chhhHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcc----------ccccc
Q 021089          152 LRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQ----------NAKHS  221 (317)
Q Consensus       152 ~~~a~r~~~~l~~~~~~~~~~~~~kWf~~~DDDTyv~~~nL~~~L~~~d~~~p~yiG~~~e~~~~----------~~~~g  221 (317)
                      +  .+++...+++..     .+++|||+++||||||+++||+++|++||+++++|+|.+++....          ....+
T Consensus        78 l--~~K~~~~~~~~l-----~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~  150 (280)
T 2j0a_A           78 L--SCKMAAEFDAFL-----VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVR  150 (280)
T ss_dssp             C--CHHHHHHHHHHH-----HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred             h--HHHHHHHHHHHh-----CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCccccccccc
Confidence            1  123333333222     278999999999999999999999999999999999998854311          01224


Q ss_pred             ccccccCccccccHHHHHHHHHhhhhhhhhc----ccCCcchHHHHHHHH-HhCCcceeCCCCCcCccC
Q 021089          222 FGMAFGGGGFAISHSLARVLAGALDSCLMRY----AHLYGSDARVFSCLV-ELGVGLTPEPGFHQFRCM  285 (317)
Q Consensus       222 ~~~~~GGaG~vlSr~ll~~L~~~~d~C~~~~----~~~~~~D~~lg~Cl~-~lGV~lt~~~~f~q~d~~  285 (317)
                      |+||+||||||||++++++|.+..+.|. -+    .....+|+.||+|++ ++||+++++++|||....
T Consensus       151 ~~y~~GGaG~vlSr~~l~~l~~~~~~~~-~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~  218 (280)
T 2j0a_A          151 FWFATGGAGFCINRQLALKMVPWASGSH-FVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLET  218 (280)
T ss_dssp             CCEECGGGCEEEEHHHHHHHHHHHTTCT-TSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSC
T ss_pred             cCcccCCCEEEECHHHHHHHHHhhcccc-cccccccCCCCccHHHHHHHHhcCCCCceecccccCCCch
Confidence            6799999999999999999998766662 11    113458999999998 899999999999998653

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=89.34  E-value=3.7  Score=42.79  Aligned_cols=96  Identities=16%  Similarity=0.032  Sum_probs=62.8

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccC--CCCCCeEEeecCCCC-----------c----c-----------cccccccc
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSEGY-----------E----Q-----------NAKHSFGM  224 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~--d~~~p~yiG~~~e~~-----------~----~-----------~~~~g~~~  224 (317)
                      -+.+|++++|+|+.+..+.|.++++.+  |++-...-|......           .    .           ...++.. 
T Consensus       237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  315 (802)
T 4hg6_A          237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGA-  315 (802)
T ss_dssp             CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCC-
T ss_pred             cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCc-
Confidence            468999999999999998888888877  555444444321000           0    0           0011112 


Q ss_pred             cccCccccccHHHHHHHHHhhhhhhhhcccCCcchHHHHHHHHHhCCcceeC
Q 021089          225 AFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPE  276 (317)
Q Consensus       225 ~~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~  276 (317)
                      ...|++.++.+++++++... +      ....+||..++.-+.+.|.+....
T Consensus       316 ~~~G~~~~~Rr~al~~vGgf-~------~~~~~ED~~l~~rl~~~G~ri~~~  360 (802)
T 4hg6_A          316 FFCGSAAVLRRRALDEAGGF-A------GETITEDAETALEIHSRGWKSLYI  360 (802)
T ss_dssp             CCCSSSEEEEHHHHHHHTTC-C------CSSSSHHHHHHHHHHTTTCCEEEC
T ss_pred             eecccchhhhHHHHHHcCCc-C------CCCcchHHHHHHHHHHcCCeEEEe
Confidence            24578899999999987432 1      123569999999998888775443

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=83.34  E-value=1.9  Score=37.17  Aligned_cols=98  Identities=15%  Similarity=0.165  Sum_probs=57.0

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccCC--CCCCeEEeecC----CCCcc----------cccccccccccCccccccHH
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD--DDRWFYVGSNS----EGYEQ----------NAKHSFGMAFGGGGFAISHS  236 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~d--~~~p~yiG~~~----e~~~~----------~~~~g~~~~~GGaG~vlSr~  236 (317)
                      -+.+|++++|||.++..+.|.++++.+.  ++-.+..|...    .....          ...........|+++++.++
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~  166 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYS  166 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETH
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhhcCCCccceEEEEHH
Confidence            4679999999999999877777776553  34445555431    11000          00001123456788999999


Q ss_pred             HHHHHHHhhhhhhh-hcccCCcchHHHHHHHHHhC
Q 021089          237 LARVLAGALDSCLM-RYAHLYGSDARVFSCLVELG  270 (317)
Q Consensus       237 ll~~L~~~~d~C~~-~~~~~~~~D~~lg~Cl~~lG  270 (317)
                      +++++...+..... ......++|..+...+...|
T Consensus       167 ~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g  201 (255)
T 1qg8_A          167 VLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY  201 (255)
T ss_dssp             HHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC
T ss_pred             HHHhhcccccccccCCcccchHHHHHHHHHHHHhC
Confidence            99998633310000 00113458998887776655

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	317
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	86.04

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=86.04  E-value=0.41  Score=39.49  Aligned_cols=96  Identities=15%  Similarity=0.173  Sum_probs=55.8

Q ss_pred             CCccEEEEEcCCccccHHHHHHHHccC--CCCCCeEEeecC-----CCCc---------ccccccccccccCccccccHH
Q 021089          173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNS-----EGYE---------QNAKHSFGMAFGGGGFAISHS  236 (317)
Q Consensus       173 ~~~kWf~~~DDDTyv~~~nL~~~L~~~--d~~~p~yiG~~~-----e~~~---------~~~~~g~~~~~GGaG~vlSr~  236 (317)
                      -+.+|++++|+|.++.++.|.++++.+  +++..++.|...     +...         ....+......+++++++++.
T Consensus        87 a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (255)
T d1qg8a_          87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYS  166 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETH
T ss_pred             cccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCCcEeeeecccchhhhhhhcccccchhHHHHHH
Confidence            467999999999999876666655543  445555554421     1100         011222234567888999999


Q ss_pred             HHHHHHHhhhhhhhhccc-CCcchHHHHHHHHH
Q 021089          237 LARVLAGALDSCLMRYAH-LYGSDARVFSCLVE  268 (317)
Q Consensus       237 ll~~L~~~~d~C~~~~~~-~~~~D~~lg~Cl~~  268 (317)
                      +++++........+.... ...+|..+...+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~~  199 (255)
T d1qg8a_         167 VLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH  199 (255)
T ss_dssp             HHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT
T ss_pred             HHHHHHHhhCCCccccchhcchhhHHHHHHHHc
Confidence            999987654332211111 22478877665543