Citrus Sinensis ID: 021098

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
Protein Sequence
MLMRGMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMFSAPPPQPKYQLRRTSSSPF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEcccccccccccccccccccccccccEEEEcHHHHHHHHcccccccccccHHHHHHHHccHHHHcccccccccccccccccccccccHcHccHHHHHHHHHHcccccccccccccccccHccHHHHHHHcccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEcccccc
Coil and Loop (DISEMBL)
mlmrgmqmmgsqadgssngkqsqfqplarqnsmYSLTLDEVQNQLgdlgkplssmnlDELLKNVWTAEVEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQskssgekkprdrqatlgemTLEDFLVKAGVVaeassdkkidgpvvgvdqnvvphfpqqgpwmpyphpqyqhsqqsmmgvympgqpipqpmnmvtgavmdvsfpenqvgltspsmgtlsdpqllgrkrgaseDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEkmfsapppqpkyqlrrtssspf
Flexible Loop (DISEMBL)
MLMRGMQMMgsqadgssngkQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTlaeqtslqrqaSLSLTsalskktvdeVWRDiqqskssgekkprdrqATLGEMTLEDFLVKAGVVAEassdkkidgpvVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLtspsmgtlsdpqllgrkrgasedmiEKTVerrqkrmiknresaarsrarkqaytnelenkvsrleeENERLRKQKelekmfsapppqpkyqlrrtssspf
Low Complexity Region (SEG)
MLMRGMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEqtslqrqaslsltsalskktVDEVWRDIQQSKSSGEKKPRDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWmpyphpqyqhsqqsmmGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMFSAPPPQPKYQLRRTSSSPF
Disordered region (IsUnstruct)
********************************************************LDELLKNVWTAEVE*********************************************************TLEDFLVKAGVVAEA*****IDGPVVGVDQNVVPHFP****W****************************************************************************************************************************************************
Disordered Region (DISOPRED)
**********************************SLTLDEVQNQLGDLGKPLSSMNLDELLKNVWT***********************************************************************************************************************************************************************************************************YTNELENKVSRLEEENERLR*********************RTS****
Disordered Region (DISEMBL)
************************QPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDI**************QATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKR***************QAYTNELENKVSRLEEENERLRKQKELEKMFSA*****************
Disordered Region (DISPRO)
*LM*************************RQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVE******************SLTSALSKKTVDEVWRDIQQSK***********ATLGEMTLEDFLVKAGVVAEAS*******PVV*********FPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMV*********************************************************SAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMFSAPPP**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLMRGMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSAPPPQPKYQLRRTSSSPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	317	2.2.26 [Sep-21-2011]
Q9LES3	297	ABSCISIC ACID-INSENSITIVE	yes	no	0.864	0.922	0.559	9e-75
Q9C5Q2	262	ABSCISIC ACID-INSENSITIVE	no	no	0.772	0.935	0.515	3e-60
Q9M7Q5	392	ABSCISIC ACID-INSENSITIVE	no	no	0.968	0.783	0.352	3e-41
Q8RYD6	331	ABSCISIC ACID-INSENSITIVE	no	no	0.776	0.743	0.392	7e-27
Q9SJN0	442	Protein ABSCISIC ACID-INS	no	no	0.687	0.493	0.356	1e-25
Q9M7Q2	431	ABSCISIC ACID-INSENSITIVE	no	no	0.365	0.269	0.460	2e-23
Q9FMM7	370	ABSCISIC ACID-INSENSITIVE	no	no	0.854	0.732	0.312	1e-21
Q9M7Q3	454	ABSCISIC ACID-INSENSITIVE	no	no	0.419	0.292	0.371	8e-21
Q9M7Q4	416	ABSCISIC ACID-INSENSITIVE	no	no	0.343	0.262	0.460	2e-20
Q84JK2	285	Protein FD OS=Arabidopsis	no	no	0.268	0.298	0.563	2e-17

>sp|Q9LES3|AI5L2_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1

 Score =  280 bits (717), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 175/313 (55%), Positives = 202/313 (64%), Gaps = 39/313 (12%)

Query: 20  KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTL--- 76
           +Q++ Q L RQ+S+YSLTLDEVQN LG  GK L SMNLDELLK+V + E     +     
Sbjct: 9   EQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQPSSMAVNG 68

Query: 77  --AEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGE-KKPRDRQATLGEMTLEDFL 133
             A Q  L RQ SL+L   LSKKTVDEVW+DIQQ+K+ G   + RD+Q TLGEMTLED L
Sbjct: 69  GAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSAHERRDKQPTLGEMTLEDLL 128

Query: 134 VKAGVVAEASSDKKIDGPVVGVD--------QNVVPHFPQQGPWMPYPHPQYQHSQQSMM 185
           +KAGVV E       DGPV G          QN+     Q GPW+ Y      H   SM 
Sbjct: 129 LKAGVVTETIPGSNHDGPVGGGSAGSGAGLGQNIT----QVGPWIQY------HQLPSM- 177

Query: 186 GVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKT 245
                    PQP   +   V D+    +Q  L    MG LSD Q  GRKR AS +++EKT
Sbjct: 178 ---------PQPQAFMPYPVSDMQAMVSQSSL----MGGLSDTQTPGRKRVASGEVVEKT 224

Query: 246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMF-SAPPPQ 304
           VERRQKRMIKNRESAARSRARKQAYT+ELE KVSRLEEENERLRKQKE+EK+  S PPP 
Sbjct: 225 VERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSVPPPD 284

Query: 305 PKYQLRRTSSSPF 317
           PK QLRRTSS+PF
Sbjct: 285 PKRQLRRTSSAPF 297

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q2|AI5L3_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1

 Score =  232 bits (592), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 153/297 (51%), Positives = 176/297 (59%), Gaps = 52/297 (17%)

Query: 25  QPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQR 84
           Q L RQNS+YSL L EVQ  LG  GKPL SMNLDELLK V     E           L R
Sbjct: 14  QSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPPAEE----------GLVR 63

Query: 85  QASLSLTSALSKKTVDEVWRDIQQSKSSG--EKKPRDRQATLGEMTLEDFLVKAGVVAEA 142
           Q SL+L   LSKKTVDEVWRDIQQ K+          +Q TLGE+TLED L++AGVV E 
Sbjct: 64  QGSLTLPRDLSKKTVDEVWRDIQQDKNGNGTSTTTTHKQPTLGEITLEDLLLRAGVVTET 123

Query: 143 SSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVT 202
                       V Q  V +    G W+ Y H   Q  QQ     Y    P+ +  +MV 
Sbjct: 124 V-----------VPQENVVNIASNGQWVEYHH---QPQQQQGFMTY----PVCEMQDMVM 165

Query: 203 GAVMDVSFPENQVGLTSPSMGTLSD-PQLLGRKRGASEDMIEKTVERRQKRMIKNRESAA 261
                              MG LSD PQ  GRKR A E ++EKTVERRQKRMIKNRESAA
Sbjct: 166 -------------------MGGLSDTPQAPGRKRVAGE-IVEKTVERRQKRMIKNRESAA 205

Query: 262 RSRARKQAYTNELENKVSRLEEENERLRKQKELEKMF-SAPPPQPKYQLRRTSSSPF 317
           RSRARKQAYT+ELE KVSRLEEENE+LR+ KE+EK+  S PPP PK++LRRT+S+  
Sbjct: 206 RSRARKQAYTHELEIKVSRLEEENEKLRRLKEVEKILPSEPPPDPKWKLRRTNSASL 262

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q5|AI5L4_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1

 Score =  169 bits (427), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/394 (35%), Positives = 188/394 (47%), Gaps = 87/394 (22%)

Query: 9   MGSQAD----GSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           MG+  D    G    + ++ +PLARQ+S+YSLT DE+Q+ LG+ GK   SMN+DELLKN+
Sbjct: 1   MGTHIDINNLGGDTSRGNESKPLARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNI 60

Query: 65  WTAEVEMEGTTLAEQTS-------------LQRQASLSLTSALSKKTVDEVWRDIQQSKS 111
           WTAE      T     +             LQRQ SL+L   LS+KTVDEVW+ +   + 
Sbjct: 61  WTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKTVDEVWKYLNSKEG 120

Query: 112 SGEKKPRD---RQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGP 168
           S      D   RQ TLGEMTLEDFL++AG V +  + ++ +    G   N      + G 
Sbjct: 121 SNGNTGTDALERQQTLGEMTLEDFLLRAG-VVKEDNTQQNENSSSGFYANNGAAGLEFGF 179

Query: 169 WMPYPHP-QYQHSQQSMMGVYMPGQPI--------------------------------- 194
             P  +   +  +  SM+    PG  +                                 
Sbjct: 180 GQPNQNSISFNGNNSSMIMNQAPGLGLKVGGTMQQQQQPHQQQLQQPHQRLPPTIFPKQA 239

Query: 195 ----PQPMNMVTGAVMDVSF--PENQ--------VGLTSPSMGTLSD-------PQLLGR 233
                 P+NMV   + + S   P N         V  TSP   +  +       P + GR
Sbjct: 240 NVTFAAPVNMVNRGLFETSADGPANSNMGGAGGTVTATSPGTSSAENNTWSSPVPYVFGR 299

Query: 234 KRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK- 292
            R  S   +EK VERRQKRMIKNRESAARSRARKQAYT ELE ++  L+  N+ L+K++ 
Sbjct: 300 GR-RSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQA 358

Query: 293 --------ELEKMFSAPPPQPKYQ-LRRTSSSPF 317
                   EL++    PP   K Q LRRT + P+
Sbjct: 359 EIMKTHNSELKEFSKQPPLLAKRQCLRRTLTGPW 392

Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RYD6|AI5L1_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1

 Score =  121 bits (304), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 112/285 (39%), Positives = 152/285 (53%), Gaps = 39/285 (13%)

Query: 22  SQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTA--EVEMEGTTLAEQ 79
           S+ +P+ RQNS+ SLTLDE+Q + G   K   +MN+DE L N+WT   E + EG      
Sbjct: 30  SEEEPVGRQNSILSLTLDEIQMKSG---KSFGAMNMDEFLANLWTTVEENDNEGGGAHND 86

Query: 80  ----TSLQRQASLSLTSALSKKTVDEVWRDIQQ-------SKSSGEKKPRD--RQATLGE 126
                 L RQ SLSL   L KKTVDEVW +IQ        S +SG+    +  RQ TLGE
Sbjct: 87  GEKPAVLPRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGE 146

Query: 127 MTLEDFLVKAGVVAE-ASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMM 185
           +TLEDFLVKAGVV E   +  ++     G +       P+ G  +   H Q Q++     
Sbjct: 147 ITLEDFLVKAGVVQEPLKTTMRMSSSDFGYN-------PEFGVGL---HCQNQNNYGDNR 196

Query: 186 GVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKT 245
            VY   +P    +   + + M  +   NQ          L+       K+   +   E  
Sbjct: 197 SVYSENRPFYSVLGE-SSSCMTGNGRSNQY---------LTGLDAFRIKKRIIDGPPEIL 246

Query: 246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK 290
           +ERRQ+RMIKNRESAARSRAR+QAYT ELE +++ L EEN +L++
Sbjct: 247 MERRQRRMIKNRESAARSRARRQAYTVELELELNNLTEENTKLKE 291

Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 143/306 (46%), Gaps = 88/306 (28%)

Query: 76  LAEQTSLQRQASLSLTSALSKKTVDEVWRDIQ--------------------QSKSSGEK 115
           +A ++SL RQ SL+L + L +KTVDEVW +I                     Q+ +    
Sbjct: 134 IANESSLPRQGSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGG 193

Query: 116 KPRDRQATLGEMTLEDFLVKAGVVAE----------------------ASSDKKIDGPVV 153
           +   RQ T GEMTLEDFLVKAGVV E                      A++ +++ G   
Sbjct: 194 ETAARQPTFGEMTLEDFLVKAGVVREHPTNPKPNPNPNQNQNPSSVIPAAAQQQLYGVFQ 253

Query: 154 GVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPI---------------PQPM 198
           G      P FP Q   +  P     +++++  G Y    P+                Q M
Sbjct: 254 GTGD---PSFPGQAMGVGDPS---GYAKRTGGGGYQQAPPVQAGVCYGGGVGFGAGGQQM 307

Query: 199 NMVTGAVMDVSFP-------ENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQK 251
            MV G +  VS         +N  G     MG L      GRKR   +  +EK VERRQ+
Sbjct: 308 GMV-GPLSPVSSDGLGHGQVDNIGGQYGVDMGGLR-----GRKR-VVDGPVEKVVERRQR 360

Query: 252 RMIKNRESAARSRARKQAYTNELENKVSRLEEEN----------ERLRKQKELEKMFS-A 300
           RMIKNRESAARSRARKQAYT ELE ++++L+EEN          ER RKQ+  E + S A
Sbjct: 361 RMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKHALAELERKRKQQYFESLKSRA 420

Query: 301 PPPQPK 306
            P  PK
Sbjct: 421 QPKLPK 426

Participates in ABA-regulated gene expression during seed development and subsequent vegetative stage by acting as the major mediator of ABA repression of growth. Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 and Em6 genes promoters. Can also trans-activate its own promoter, suggesting that it is autoregulated. Plays a role in sugar-mediated senescence.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q2|AI5L7_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1

 Score =  110 bits (274), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 81/141 (57%), Gaps = 25/141 (17%)

Query: 26  PLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEM--------EGTTLA 77
           PLARQ+S+YSLT DE+QN LG  GK   SMN+DELLK++WTAE             T +A
Sbjct: 33  PLARQSSVYSLTFDELQNTLGGPGKDFGSMNMDELLKSIWTAEEAQAMAMTSAPAATAVA 92

Query: 78  E--------QTSLQRQASLSLTSALSKKTVDEVWRDI---------QQSKSSGEKKPRDR 120
           +          +LQRQ SL+L   +S+KTVDEVW+ +                   P  R
Sbjct: 93  QPGAGIPPPGGNLQRQGSLTLPRTISQKTVDEVWKCLITKDGNMEGSSGGGGESNVPPGR 152

Query: 121 QATLGEMTLEDFLVKAGVVAE 141
           Q TLGEMTLE+FL +AGVV E
Sbjct: 153 QQTLGEMTLEEFLFRAGVVRE 173

Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FMM7|AI5L8_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 8 OS=Arabidopsis thaliana GN=BZIP15 PE=2 SV=1

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 162/365 (44%), Gaps = 94/365 (25%)

Query: 27  LARQNSMYSLTLDEVQNQLG-DLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQRQ 85
           L+RQ S+YS T+D+ Q  LG D G    SMN+DEL+K++ +AE   EG+        QRQ
Sbjct: 20  LSRQGSIYSWTVDQFQTSLGLDCG----SMNMDELVKHISSAEETQEGS--------QRQ 67

Query: 86  ASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDR------QATLGEMTLEDFLVKAGVV 139
            S +L   LSK+ V EVW+ I + K +              Q TLGE+TLE+F ++AG  
Sbjct: 68  GSTTLPPTLSKQNVGEVWKSITEEKHTNNNGGVTNITHLQGQQTLGEITLEEFFIRAGAR 127

Query: 140 AEASSDKKIDGPVVGVDQNVVPHFP---QQGP----------WMPYPHPQYQHSQ-QSMM 185
              ++   I      +  N  PH     Q  P           +P  H  Y H      M
Sbjct: 128 GGNTNGGSIHDSSSSISGN--PHTSLGVQIQPKAMVSDFMNNMVPRSHDSYLHQNVNGSM 185

Query: 186 GVYMPGQPIPQPMNMVTGAVM--DVSFPENQVGLTS-----------PSMGTLSD----- 227
             Y P Q I   M+M  G      + F    +G  +           PS+ T+       
Sbjct: 186 STYQPQQSI---MSMPNGYSYGKQIRFSNGSLGSGNQSLQDTKRSLVPSVATIPSEAITC 242

Query: 228 ------PQLLGRK----------------------RGA---SEDMIEK-TVERRQKRMIK 255
                 P L G++                      RG    SE   EK  V+++ +R IK
Sbjct: 243 SPVTPFPTLNGKQKINGESSLLSPSPYISNGSTSTRGGKINSEITAEKQFVDKKLRRKIK 302

Query: 256 NRESAARSRARKQAYTNELENKVSRLEEENERLRKQ------KELEKMFSAPPPQPKYQL 309
           NRESAARSRARKQA T E+E ++  L+++ E L KQ      +++E    +   +P+ +L
Sbjct: 303 NRESAARSRARKQAQTMEVEVELENLKKDYEELLKQHVELRKRQMEPGMISLHERPERKL 362

Query: 310 RRTSS 314
           RRT S
Sbjct: 363 RRTKS 367

Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q3|AI5L6_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1

 Score =  101 bits (251), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 85/183 (46%), Gaps = 50/183 (27%)

Query: 26  PLARQNSMYSLTLDEVQNQLGD-LGKPLSSMNLDELLKNVWTAE---------------- 68
           PL RQNS++SLT DE QN  G  +GK   SMN+DELLKN+WTAE                
Sbjct: 26  PLTRQNSVFSLTFDEFQNSWGGGIGKDFGSMNMDELLKNIWTAEESHSMMGNNTSYTNIS 85

Query: 69  ----------------------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDI 106
                                 V  E        SLQRQ SL+L   +S+K VD+VW+++
Sbjct: 86  NGNSGNTVINGGGNNIGGLAVGVGGESGGFFTGGSLQRQGSLTLPRTISQKRVDDVWKEL 145

Query: 107 QQSK-------SSGEKKPRDRQATLGEMTLEDFLVKAGVVAE----ASSDKKIDGPVVGV 155
            +         + G      RQ TLGEMTLE+FLV+AGVV E      S    +G   G 
Sbjct: 146 MKEDDIGNGVVNGGTSGIPQRQQTLGEMTLEEFLVRAGVVREEPQPVESVTNFNGGFYGF 205

Query: 156 DQN 158
             N
Sbjct: 206 GSN 208

Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q4|AI5L5_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 81/139 (58%), Gaps = 30/139 (21%)

Query: 27  LARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLA--------- 77
           L RQ S+YSLT DE Q+    +GK   SMN+DELLKN+W+AE   E   +A         
Sbjct: 21  LTRQGSIYSLTFDEFQS---SVGKDFGSMNMDELLKNIWSAE---ETQAMASGVVPVLGG 74

Query: 78  --EQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSG-------------EKKPRDRQA 122
             E   LQRQ SL+L   LS+KTVD+VW+D+ +  SSG              +    RQ 
Sbjct: 75  GQEGLQLQRQGSLTLPRTLSQKTVDQVWKDLSKVGSSGVGGSNLSQVAQAQSQSQSQRQQ 134

Query: 123 TLGEMTLEDFLVKAGVVAE 141
           TLGE+TLE+FLV+AGVV E
Sbjct: 135 TLGEVTLEEFLVRAGVVRE 153

Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84JK2|FD_ARATH Protein FD OS=Arabidopsis thaliana GN=FD PE=1 SV=1

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 2/87 (2%)

Query: 231 LGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK 290
            G+KRG  +D  E +  RR KRMIKNRESAARSRARKQAYTNELE +V+ L+ EN RL++
Sbjct: 201 FGKKRG--QDSNEGSGNRRHKRMIKNRESAARSRARKQAYTNELELEVAHLQAENARLKR 258

Query: 291 QKELEKMFSAPPPQPKYQLRRTSSSPF 317
           Q++  KM +A     K  L+R+S++PF
Sbjct: 259 QQDQLKMAAAIQQPKKNTLQRSSTAPF 285

Transcription factor required for the transition to flowering promoted by FT.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
118483091	322	unknown [Populus trichocarpa]	0.987	0.972	0.757	1e-131
302398623	322	BZIP domain class transcription factor [	0.984	0.968	0.760	1e-131
224100543	317	predicted protein [Populus trichocarpa]	0.974	0.974	0.760	1e-130
255542297	310	DNA binding protein, putative [Ricinus c	0.908	0.929	0.789	1e-127
449446331	321	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.984	0.971	0.763	1e-125
356515347	316	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.971	0.974	0.712	1e-124
356526358	323	PREDICTED: transcription factor bZIP70 [	0.987	0.969	0.717	1e-123
59896064	322	bZIP transcription factor [Malus x domes	0.984	0.968	0.751	1e-122
225463745	325	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.936	0.913	0.774	1e-121
224113323	316	predicted protein [Populus trichocarpa]	0.971	0.974	0.741	1e-117

>gi|118483091|gb|ABK93455.1| unknown [Populus trichocarpa]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/321 (75%), Positives = 264/321 (82%), Gaps = 8/321 (2%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           GMQ MGSQ DGSS+ KQSQFQPL RQNSMYSLTLD+VQNQLGDLGKPLSSMNLDELLKNV
Sbjct: 2   GMQTMGSQGDGSSHHKQSQFQPLVRQNSMYSLTLDKVQNQLGDLGKPLSSMNLDELLKNV 61

Query: 65  WTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPR 118
           WT E      +E+EG   A QT+LQ QAS+SLTSALSKKTVDEVW+DIQQSK  GE K R
Sbjct: 62  WTVEANRTMGLEVEGIPFANQTALQHQASISLTSALSKKTVDEVWKDIQQSKHDGEMKSR 121

Query: 119 DRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYP-HPQY 177
           +RQ TLGEMTLEDFLVKAGVVAEAS DKK  G VV VD +    F QQ  W+ YP HPQY
Sbjct: 122 ERQPTLGEMTLEDFLVKAGVVAEASVDKKDGGSVVTVDTHAAQQFLQQSQWVQYPPHPQY 181

Query: 178 QHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGA 237
            H QQSMMGVYMPGQP+PQP++M  G++MDVS+PENQV L  P MGTLSD Q   RKRG 
Sbjct: 182 HHPQQSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVTLPPPLMGTLSDTQTPARKRGV 241

Query: 238 SEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKM 297
            EDMI KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK++ELE M
Sbjct: 242 PEDMIGKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRRELENM 301

Query: 298 F-SAPPPQPKYQLRRTSSSPF 317
               P P+PKYQLRRT+S+PF
Sbjct: 302 LPCVPLPEPKYQLRRTASAPF 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398623|gb|ADL36606.1| BZIP domain class transcription factor [Malus x domestica]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/322 (76%), Positives = 265/322 (82%), Gaps = 10/322 (3%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           G+Q MGSQ     N KQ QFQPL RQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV
Sbjct: 2   GIQTMGSQGGADGNCKQPQFQPLGRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 61

Query: 65  WTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPR 118
           W+ E      +++EGTTL  Q  LQRQASLSLTSALSKKTVDEVWRDIQQSK   EKK +
Sbjct: 62  WSVEANQTMGIDIEGTTLVNQAQLQRQASLSLTSALSKKTVDEVWRDIQQSKDEEEKKSQ 121

Query: 119 DRQATLGEMTLEDFLVKAGVVAEA--SSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQ 176
           +RQ TLGEMTLEDFLVKAGVVAEA  SSDK+  GP+VGVD NV   FPQ G WM Y  PQ
Sbjct: 122 ERQRTLGEMTLEDFLVKAGVVAEAEASSDKQCAGPLVGVDANVAAQFPQ-GQWMQYSQPQ 180

Query: 177 YQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRG 236
           YQH QQSMMGVYMP QPIP PM++  GA+M+V +P+NQV L SP MG LSD    GRKRG
Sbjct: 181 YQHPQQSMMGVYMPSQPIPPPMHVGAGAMMEVPYPDNQVPLPSPLMGALSDTPTPGRKRG 240

Query: 237 ASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEK 296
             ED++EKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEK
Sbjct: 241 NPEDIVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEK 300

Query: 297 MF-SAPPPQPKYQLRRTSSSPF 317
           +  SAPPP+PKYQLRRTSS+P 
Sbjct: 301 VLPSAPPPEPKYQLRRTSSAPL 322

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100543|ref|XP_002311917.1| predicted protein [Populus trichocarpa] gi|222851737|gb|EEE89284.1| predicted protein [Populus trichocarpa]

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 241/317 (76%), Positives = 261/317 (82%), Gaps = 8/317 (2%)

Query: 9   MGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAE 68
           MGSQ DGSS+ KQSQFQPL RQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWT E
Sbjct: 1   MGSQGDGSSHHKQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVE 60

Query: 69  ------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQA 122
                 +E+EG   A QT+LQ QAS+SLTSALSKKTVDEVW+DIQQSK  GE K R+RQ 
Sbjct: 61  ANRTMGLEVEGIPFANQTALQHQASISLTSALSKKTVDEVWKDIQQSKHDGEMKSRERQP 120

Query: 123 TLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYP-HPQYQHSQ 181
           TLGEMTLEDFLVKAGVVAEAS DKK  G VV VD +    F QQ  W+ YP HPQY H Q
Sbjct: 121 TLGEMTLEDFLVKAGVVAEASVDKKDGGSVVTVDTHAAQQFLQQSQWVQYPPHPQYHHPQ 180

Query: 182 QSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDM 241
           QSMMGVYMPGQP+PQP++M  G++MDVS+PENQV L  P MGTLSD Q   RKRG  EDM
Sbjct: 181 QSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVTLPPPLMGTLSDTQTPARKRGVPEDM 240

Query: 242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMF-SA 300
           I KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK++ELE M    
Sbjct: 241 IGKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRRELENMLPCV 300

Query: 301 PPPQPKYQLRRTSSSPF 317
           P P+PKYQLRRT+S+PF
Sbjct: 301 PLPEPKYQLRRTASAPF 317

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542297|ref|XP_002512212.1| DNA binding protein, putative [Ricinus communis] gi|223548756|gb|EEF50246.1| DNA binding protein, putative [Ricinus communis]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/294 (78%), Positives = 254/294 (86%), Gaps = 6/294 (2%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           G+Q MGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQ+QLGDLGKPLSSMNLDELLKNV
Sbjct: 2   GIQTMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQHQLGDLGKPLSSMNLDELLKNV 61

Query: 65  WTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPR 118
           WTAE      +E+EGT LA QT+LQRQASLSLTSALSKKTVDEVWRDIQ+ K++  KK R
Sbjct: 62  WTAEANHTIGMEVEGTQLANQTALQRQASLSLTSALSKKTVDEVWRDIQEGKNNEGKKSR 121

Query: 119 DRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQ 178
           DRQ TLGEMTLEDFLVKAGVVAEASS+KK D PVV V+ NV   FPQQ  W+ YPHPQYQ
Sbjct: 122 DRQPTLGEMTLEDFLVKAGVVAEASSEKKDDSPVVRVETNVGSQFPQQSQWIQYPHPQYQ 181

Query: 179 HSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGAS 238
           H QQSMMGVY+P Q +PQP++M  GAV+DVS+PENQ+ L +  MGTLSD Q   RKRG  
Sbjct: 182 HPQQSMMGVYLPAQSMPQPLHMGAGAVLDVSYPENQLSLPTSLMGTLSDVQTPARKRGTP 241

Query: 239 EDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
           EDM+EKTVERRQKRMIKNRESAARSRARKQAYTNELE+KVSRLE ENERLRK+K
Sbjct: 242 EDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELEHKVSRLEAENERLRKRK 295

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446331|ref|XP_004140925.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus] gi|449529052|ref|XP_004171515.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/321 (76%), Positives = 263/321 (81%), Gaps = 9/321 (2%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           G+Q MGSQA G  NGKQSQFQPL RQNS+YSLTLDEVQNQLGDLGKPL SMNLDELLKNV
Sbjct: 2   GIQTMGSQAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKNV 61

Query: 65  WTAEVEM-------EGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKP 117
           WTAE          +   LA QTSLQRQASLSL  ALSKKTVDEVWRDIQQSK S EKK 
Sbjct: 62  WTAEANQTVGKDNEDNNILANQTSLQRQASLSLNGALSKKTVDEVWRDIQQSKDSEEKKS 121

Query: 118 RDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQY 177
           R+RQ TLGEMTLEDFLVKAGVVAE SS+KK  GPVV +D N+ P F QQ  WM YP PQY
Sbjct: 122 RERQPTLGEMTLEDFLVKAGVVAETSSNKKGAGPVVEIDANITPQF-QQTQWMQYPQPQY 180

Query: 178 QHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGA 237
           Q  Q +MMGVYM GQPIPQP+++  GAVMDV + +NQ+ L +P MG LSD Q  GRKRGA
Sbjct: 181 QSQQAAMMGVYMSGQPIPQPLHVGGGAVMDVPYVDNQLTLPTPLMGALSDTQASGRKRGA 240

Query: 238 SEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKM 297
            EDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK+KELEKM
Sbjct: 241 PEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKM 300

Query: 298 FS-APPPQPKYQLRRTSSSPF 317
              AP P+PKYQLRRTSS+PF
Sbjct: 301 LPLAPSPEPKYQLRRTSSAPF 321

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515347|ref|XP_003526362.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Glycine max]

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/317 (71%), Positives = 259/317 (81%), Gaps = 9/317 (2%)

Query: 9   MGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAE 68
           MGSQ  G ++GK SQ QPL  QNSMYSLTLDEVQN LGDLGKPLSSMNLDELLKNVWT E
Sbjct: 1   MGSQCGGDNSGKHSQLQPLVPQNSMYSLTLDEVQNHLGDLGKPLSSMNLDELLKNVWTVE 60

Query: 69  ------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQA 122
                 V++EGT L  Q +LQRQASLSLTSALS KTVDEVWRDIQQSK + +KK ++RQ+
Sbjct: 61  ANQSTGVDIEGTALTSQAALQRQASLSLTSALSGKTVDEVWRDIQQSKDNKDKKSQERQS 120

Query: 123 TLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVV-PHFPQQGPWMPYPHPQYQHSQ 181
           TLGEMTLEDFLVKAG+VAEA S++K  G  VGVD NVV P FPQ GPW+ Y  PQYQH Q
Sbjct: 121 TLGEMTLEDFLVKAGIVAEA-SNRKNTGATVGVDSNVVAPQFPQHGPWIQYAQPQYQHPQ 179

Query: 182 QSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDM 241
           Q +MG+Y+PGQ   QP++M  G   DV + + QV L+SP MGTLSD +  GRKRG SEDM
Sbjct: 180 QGLMGIYIPGQNKAQPLHMGAGVATDVLYADGQVALSSPVMGTLSDTRRPGRKRGTSEDM 239

Query: 242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMFSA- 300
           +EKTVERRQKRMIKNRESAARSRARKQAYT ELE+KVSRLEEENE+LR+Q+ELEKM S+ 
Sbjct: 240 VEKTVERRQKRMIKNRESAARSRARKQAYTTELEHKVSRLEEENEKLRRQQELEKMLSSN 299

Query: 301 PPPQPKYQLRRTSSSPF 317
           PPP+P+YQ+RRTSS+ F
Sbjct: 300 PPPEPRYQIRRTSSASF 316

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526358|ref|XP_003531785.1| PREDICTED: transcription factor bZIP70 [Glycine max]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/322 (71%), Positives = 258/322 (80%), Gaps = 9/322 (2%)

Query: 5   GMQMMGSQADGS-SNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKN 63
           G Q MG+   G  SNGKQS  QPL RQNSMYSLTLDEVQNQLGDLGKPL+SMN+DELLKN
Sbjct: 2   GTQTMGTHGGGGDSNGKQSPLQPLVRQNSMYSLTLDEVQNQLGDLGKPLTSMNIDELLKN 61

Query: 64  VWTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKP 117
           VWTAE      ++ EGT  A Q SLQRQASLSLT ALSKKTVDEVWRDIQQ+K  GEKK 
Sbjct: 62  VWTAEASQTIGMDNEGTAQASQASLQRQASLSLTGALSKKTVDEVWRDIQQNKIVGEKKF 121

Query: 118 RDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNV-VPHFPQQGPWMPYPHPQ 176
           +DR  TLGEMTLEDFLVKAGVVA ASS++     + GVD NV VP FP Q  W+ YP  Q
Sbjct: 122 QDRHPTLGEMTLEDFLVKAGVVAGASSNRTNTSTIAGVDSNVAVPQFPSQAQWIQYPQAQ 181

Query: 177 YQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRG 236
           YQH  QS+MG+YMP Q + QP++M  GA +DVSF +NQ+ + S  MGT+SD Q  GRK+ 
Sbjct: 182 YQHPPQSLMGMYMPSQGMVQPLHMGAGASLDVSFADNQMAMPSSLMGTMSDTQTPGRKKS 241

Query: 237 ASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEK 296
            SEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK+KELE+
Sbjct: 242 TSEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEQ 301

Query: 297 MFS-APPPQPKYQLRRTSSSPF 317
           M S APPP+PKYQLRR +S+PF
Sbjct: 302 MLSCAPPPEPKYQLRRIASAPF 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|59896064|gb|AAX11392.1| bZIP transcription factor [Malus x domestica]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/322 (75%), Positives = 266/322 (82%), Gaps = 10/322 (3%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           G+  MGSQ     N KQSQFQPLARQNS+YSLTLDEVQNQLGDLGKPLSSMNLDELLKNV
Sbjct: 2   GIPTMGSQGGADGNCKQSQFQPLARQNSIYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 61

Query: 65  WTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPR 118
           W+AE      +++EG TL  Q  LQRQASLSLTSALSKKTVDEVW+DIQQSK   EKK +
Sbjct: 62  WSAEANQIMGIDIEGNTLVNQAQLQRQASLSLTSALSKKTVDEVWKDIQQSKDEEEKKSQ 121

Query: 119 DRQATLGEMTLEDFLVKAGVVAEA--SSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQ 176
           +RQ TLGEMTLEDFLVKAGVVAEA  SSDKK   P+VGVD NV    PQ G WM YP PQ
Sbjct: 122 ERQRTLGEMTLEDFLVKAGVVAEAEASSDKKYADPLVGVDANVAAQLPQ-GQWMQYPQPQ 180

Query: 177 YQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRG 236
           YQH QQSMMGVYMP QP+  PM++  GA+M+V +P+NQV + SP MGTLSD Q  GRKRG
Sbjct: 181 YQHPQQSMMGVYMPSQPLQPPMHVGAGAMMEVPYPDNQVAVPSPLMGTLSDTQTPGRKRG 240

Query: 237 ASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEK 296
             ED++EKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE EK
Sbjct: 241 NPEDIVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKEQEK 300

Query: 297 MF-SAPPPQPKYQLRRTSSSPF 317
           +  SAPPP+PKYQLRRT+S+PF
Sbjct: 301 VLPSAPPPEPKYQLRRTTSAPF 322

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463745|ref|XP_002265747.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like isoform 1 [Vitis vinifera]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/306 (77%), Positives = 261/306 (85%), Gaps = 9/306 (2%)

Query: 20  KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAE------VEMEG 73
           KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPL+SMNLDELLKNVWT E      ++ EG
Sbjct: 21  KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLTSMNLDELLKNVWTVEANNSVGMDAEG 80

Query: 74  TTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQ-QSKSSGEKKPRDRQATLGEMTLEDF 132
             L+ Q++LQR+ SLSLT ALSKKTVDEVWRDIQ   K+S EKK R+RQ TLGEMTLEDF
Sbjct: 81  AGLSNQSALQREPSLSLTGALSKKTVDEVWRDIQGHGKNSEEKKSRERQPTLGEMTLEDF 140

Query: 133 LVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQ 192
           LVKAGVVAE S DKKI G V+GVD NV P FPQQG WM YP PQ+ H QQ+M+GVYMPGQ
Sbjct: 141 LVKAGVVAEPS-DKKIAGTVIGVDPNVGPQFPQQGQWMQYPQPQFPHPQQNMIGVYMPGQ 199

Query: 193 PIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKR 252
           P+PQP+ M   +VMDV++P+NQV L+SP MG LSD Q  GRKR + EDMIEKTVERRQKR
Sbjct: 200 PMPQPLPMGPSSVMDVTYPDNQVALSSPLMGALSDTQAPGRKRVSQEDMIEKTVERRQKR 259

Query: 253 MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMF-SAPPPQPKYQLRR 311
           MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK+KELEKM  SAPPP+PKYQLRR
Sbjct: 260 MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPSAPPPEPKYQLRR 319

Query: 312 TSSSPF 317
           TSS+PF
Sbjct: 320 TSSAPF 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113323|ref|XP_002316457.1| predicted protein [Populus trichocarpa] gi|222865497|gb|EEF02628.1| predicted protein [Populus trichocarpa]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/317 (74%), Positives = 257/317 (81%), Gaps = 9/317 (2%)

Query: 9   MGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAE 68
           MGSQ DGSS+  QSQFQPL RQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWT E
Sbjct: 1   MGSQGDGSSHHMQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVE 60

Query: 69  ------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQA 122
                 +E+EGT  A QT+LQRQASLSLTSALSKKTVDEVW+DIQQSK   E K ++RQ 
Sbjct: 61  AAQTTALEVEGTPFANQTALQRQASLSLTSALSKKTVDEVWKDIQQSKHDEEMKSKERQP 120

Query: 123 TLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWM-PYPHPQYQHSQ 181
           T GEMTLEDFLVKAGVVAEAS DKK  G VV VD N    F QQ  W+   P PQYQH Q
Sbjct: 121 TFGEMTLEDFLVKAGVVAEASVDKKDGGSVVLVDTNAAQQFLQQSQWVQYPPQPQYQHPQ 180

Query: 182 QSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDM 241
           QSMMGVYMPGQP+PQP++M  G++MDVS+PENQV +  P MGTLSD Q   RKRG   +M
Sbjct: 181 QSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVPVPPPLMGTLSDTQTPARKRGVP-NM 239

Query: 242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMFSAP 301
            EKTVERRQKRMIKNRESAARSRARKQAYT+ELENKVSRLEEEN RLRK++ELE M    
Sbjct: 240 FEKTVERRQKRMIKNRESAARSRARKQAYTSELENKVSRLEEENGRLRKRRELENMLPCI 299

Query: 302 P-PQPKYQLRRTSSSPF 317
           P P+PKYQLRRT+S+PF
Sbjct: 300 PLPEPKYQLRRTTSAPF 316

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
TAIR|locus:2103665	297	AREB3 "ABA-responsive element	0.889	0.949	0.504	1.5e-60
TAIR|locus:2063275	262	EEL "AT2G41070" [Arabidopsis t	0.293	0.354	0.75	2e-51
UNIPROTKB|Q8RZ35	388	P0489B03.11 "Putative ABA resp	0.570	0.466	0.425	1.7e-38
TAIR|locus:2118969	454	ABF3 "AT4G34000" [Arabidopsis	0.381	0.266	0.463	1.9e-38
TAIR|locus:2049425	442	ABI5 "ABA INSENSITIVE 5" [Arab	0.271	0.194	0.53	2.2e-34
UNIPROTKB|Q6ZDF3	318	TRAB1 "bZIP transcription fact	0.362	0.361	0.436	2.2e-28
TAIR|locus:2076018	331	DPBF2 "AT3G44460" [Arabidopsis	0.369	0.353	0.407	1.2e-26
TAIR|locus:2159986	370	AT5G42910 "AT5G42910" [Arabido	0.242	0.208	0.476	9.4e-18
TAIR|locus:2172507	315	AT5G44080 [Arabidopsis thalian	0.195	0.196	0.548	1.5e-16
TAIR|locus:2024224	270	GBF4 "G-box binding factor 4"	0.189	0.222	0.606	2.6e-15

TAIR|locus:2103665 AREB3 "ABA-responsive element binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 154/305 (50%), Positives = 179/305 (58%)

Query:    20 KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEX 79
             +Q++ Q L RQ+S+YSLTLDEVQN LG  GK L SMNLDELLK+V + E     +     
Sbjct:     9 EQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQPSSMAVNG 68

Query:    80 XXXXXXXXXXXXXXX-----XXXXVDEVWRDIQQSKSSGEK-KPRDRQATLGEMTLEDFL 133
                                     VDEVW+DIQQ+K+ G   + RD+Q TLGEMTLED L
Sbjct:    69 GAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSAHERRDKQPTLGEMTLEDLL 128

Query:   134 VKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWXXXXXXXXXXXXXXXXGVYMPGQP 193
             +KAGVV E       DGPV G            G                    Y     
Sbjct:   129 LKAGVVTETIPGSNHDGPVGG------------GSAGSGAGLGQNITQVGPWIQYHQLPS 176

Query:   194 IPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRM 253
             +PQP   +   V D+    +Q  L    MG LSD Q  GRKR AS +++EKTVERRQKRM
Sbjct:   177 MPQPQAFMPYPVSDMQAMVSQSSL----MGGLSDTQTPGRKRVASGEVVEKTVERRQKRM 232

Query:   254 IKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMF-SAPPPQPKYQLRRT 312
             IKNRESAARSRARKQAYT+ELE KVSRLEEENERLRKQKE+EK+  S PPP PK QLRRT
Sbjct:   233 IKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQKEVEKILPSVPPPDPKRQLRRT 292

Query:   313 SSSPF 317
             SS+PF
Sbjct:   293 SSAPF 297

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2063275 EEL "AT2G41070" [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
 Identities = 72/96 (75%), Positives = 83/96 (86%)

Query:   222 MGTLSD-PQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSR 280
             MG LSD PQ  GRKR A E ++EKTVERRQKRMIKNRESAARSRARKQAYT+ELE KVSR
Sbjct:   166 MGGLSDTPQAPGRKRVAGE-IVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSR 224

Query:   281 LEEENERLRKQKELEKMF-SAPPPQPKYQLRRTSSS 315
             LEEENE+LR+ KE+EK+  S PPP PK++LRRT+S+
Sbjct:   225 LEEENEKLRRLKEVEKILPSEPPPDPKWKLRRTNSA 260

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

UNIPROTKB|Q8RZ35 P0489B03.11 "Putative ABA response element binding factor" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 275 (101.9 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
 Identities = 89/209 (42%), Positives = 111/209 (53%)

Query:   106 IQQSKSSGEKKPRDRQATLGEMTLEDFLVKAGVVA------EASSDKKIDGPVVGVDQNV 159
             +Q    SG     DRQ TLGEMTLEDFLVKAGVV        A     ++GPV  + Q  
Sbjct:   151 LQPHAGSGGVAANDRQVTLGEMTLEDFLVKAGVVRGSFTGQAAMGSGMVNGPVNPMQQG- 209

Query:   160 VPHFPQQGPWXXXXXXXXXXXXXXXXGVYMPG----QPIPQPMNMVTGAVMDVSFPENQV 215
                  Q GP                 G+  PG      I  P     GA++ VS P +  
Sbjct:   210 -----QGGPMMFPVGPVNAMYPVMGDGMGYPGGYNGMAIVPPPPPAQGAMVVVS-PGSSD 263

Query:   216 GLTSPS----MGTLSDPQLL--G-RKRGASED-MIEKTVERRQKRMIKNRESAARSRARK 267
             G+++ +    M  + +  ++  G RKR   ED   EKTVERRQ+RMIKNRESAARSRARK
Sbjct:   264 GMSAMTHADMMNCIGNGMMIENGTRKRPHREDGCAEKTVERRQRRMIKNRESAARSRARK 323

Query:   268 QAYTNELENKVSRLEEENERLRKQKELEK 296
             QAYT ELE +++ L++EN RL   KE EK
Sbjct:   324 QAYTVELEAELNYLKQENARL---KEAEK 349

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

TAIR|locus:2118969 ABF3 "AT4G34000" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
 Identities = 64/138 (46%), Positives = 84/138 (60%)

Query:   196 QPMNMVTGAVMDVSFPENQVG--LTSPSM--GTLSD-PQLLGRKRGASEDMIEKTVERRQ 250
             Q ++  TG  +    P +Q+   LT  S    +LS  P + GR R     ++EK +ERRQ
Sbjct:   318 QAVDFKTGVTVAAVSPGSQMSPDLTPKSALDASLSPVPYMFGRVRKTGA-VLEKVIERRQ 376

Query:   251 KRMIKNRESAARSRARKQAYTNELENKVSRLEEENERL-RKQKEL-EKMFSA---PPPQP 305
             KRMIKNRESAARSRARKQAYT ELE ++++L+E NE L +KQ E+ EK  +    P  QP
Sbjct:   377 KRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQVEIMEKQKNQLLEPLRQP 436

Query:   306 -----KYQ-LRRTSSSPF 317
                  K Q LRRT + P+
Sbjct:   437 WGMGCKRQCLRRTLTGPW 454

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

TAIR|locus:2049425 ABI5 "ABA INSENSITIVE 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.2e-34, Sum P(4) = 2.2e-34
 Identities = 53/100 (53%), Positives = 65/100 (65%)

Query:   230 LLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEEN---- 285
             L GRKR   +  +EK VERRQ+RMIKNRESAARSRARKQAYT ELE ++++L+EEN    
Sbjct:   340 LRGRKR-VVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLK 398

Query:   286 ------ERLRKQKELEKMFS-APPPQPKY--QLRRTSSSP 316
                   ER RKQ+  E + S A P  PK   +LR    +P
Sbjct:   399 HALAELERKRKQQYFESLKSRAQPKLPKSNGRLRTLMRNP 438

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048316 "seed development" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010200 "response to chitin" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IEP;RCA

GO:0010187 "negative regulation of seed germination" evidence=IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q6ZDF3 TRAB1 "bZIP transcription factor TRAB1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 201 (75.8 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
 Identities = 55/126 (43%), Positives = 78/126 (61%)

Query:   197 PMNMVTGAVMDVSFPENQVGLTSPSMGTLSDP---QLLGRKRGASEDMIEKTVERRQKRM 253
             P++   G  MD S  +    L+SP M  +  P    + GR+ G +   +EK VERRQ+RM
Sbjct:   184 PVDTSVGQ-MD-SAGKGDGDLSSP-MAPVPYPFEGVIRGRRSGGN---VEKVVERRQRRM 237

Query:   254 IKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE--LEKMFSAPPPQPKYQLRR 311
             IKNRESAARSRARKQAYT ELE +V +L+E+N  L+K++E  +E   +  P   K Q+  
Sbjct:   238 IKNRESAARSRARKQAYTMELEAEVQKLKEQNMELQKKQEEIMEMQKNFFPEMQKNQVLE 297

Query:   312 TSSSPF 317
               ++P+
Sbjct:   298 AVNNPY 303

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2076018 DPBF2 "AT3G44460" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
 Identities = 55/135 (40%), Positives = 70/135 (51%)

Query:    22 SQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTA--EVEMEGTTLAEX 79
             S+ +P+ RQNS+ SLTLDE+Q + G   K   +MN+DE L N+WT   E + EG      
Sbjct:    30 SEEEPVGRQNSILSLTLDEIQMKSG---KSFGAMNMDEFLANLWTTVEENDNEGGGAHND 86

Query:    80 XXXXXXXXXXXXXXXXX----XXVDEVWRDIQQ-------SKSSGEKKPRD--RQATLGE 126
                                    VDEVW +IQ        S +SG+    +  RQ TLGE
Sbjct:    87 GEKPAVLPRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGE 146

Query:   127 MTLEDFLVKAGVVAE 141
             +TLEDFLVKAGVV E
Sbjct:   147 ITLEDFLVKAGVVQE 161

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0033613 "activating transcription factor binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2159986 AT5G42910 "AT5G42910" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
 Identities = 40/84 (47%), Positives = 53/84 (63%)

Query:   238 SEDMIEKT-VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK-ELE 295
             SE   EK  V+++ +R IKNRESAARSRARKQA T E+E ++  L+++ E L KQ  EL 
Sbjct:   284 SEITAEKQFVDKKLRRKIKNRESAARSRARKQAQTMEVEVELENLKKDYEELLKQHVELR 343

Query:   296 KMFSAPP-----PQPKYQLRRTSS 314
             K    P       +P+ +LRRT S
Sbjct:   344 KRQMEPGMISLHERPERKLRRTKS 367

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2172507 AT5G44080 [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
 Identities = 34/62 (54%), Positives = 44/62 (70%)

Query:   232 GRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
             G++     + ++K   +RQ+RMIKNRESAARSR RKQAY  ELE   ++LEEENE L K+
Sbjct:   217 GKRARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELEALAAKLEEENELLSKE 276

Query:   292 KE 293
              E
Sbjct:   277 IE 278

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2024224 GBF4 "G-box binding factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
 Identities = 37/61 (60%), Positives = 45/61 (73%)

Query:   234 KRG-ASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
             KRG    + ++K   +RQKRMIKNRESAARSR RKQAY  ELE   ++LEEENE+L K+ 
Sbjct:   174 KRGRVMMEAMDKAAAQRQKRMIKNRESAARSRERKQAYQVELETLAAKLEEENEQLLKEI 233

Query:   293 E 293
             E
Sbjct:   234 E 234

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LES3	AI5L2_ARATH	No assigned EC number	0.5591	0.8643	0.9225	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	317
smart00338	65	smart00338, BRLZ, basic region leucin zipper	1e-15
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	2e-12
pfam07716	54	pfam07716, bZIP_2, Basic region leucine zipper	2e-10
cd12193	54	cd12193, B_zip1, basic leucine zipper DNA-binding	7e-08

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 69.9 bits (172), Expect = 1e-15
 Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 5/59 (8%)

Query: 244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ-----KELEKM 297
           +  E+R++R  +NRE+A RSR RK+A   ELE KV +LE ENERL+K+     +ELEK+
Sbjct: 1   EEDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIERLRRELEKL 59

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ-KELEKM 297
           +R++R  KNRE+A RSR RK+AY  ELE KV  LE EN+ LR + + L+K 
Sbjct: 5   KRERRRQKNREAARRSRLRKKAYIEELEEKVKELEAENKTLRSELERLKKE 55

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper

 Score = 54.9 bits (133), Expect = 2e-10
 Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 2/54 (3%)

Query: 244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ-KELEK 296
           K  E R +R  +N E+A RSR +K+    ELE +V  LEEEN +LR++ ++LEK
Sbjct: 1   KDDEYRDRRR-RNNEAARRSREKKKQREEELEERVKELEEENAQLRQKVEQLEK 53

Length = 54

>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 7/51 (13%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKV-------SRLEEENERLRKQ 291
            R ++  +NRE+A RSRARK     +LE+KV       S LE+E +RL+K 
Sbjct: 2   PRARKRARNREAARRSRARKMERMKQLEDKVEELTSENSDLEDEVDRLKKA 52

Basic leucine zipper (bZIP) transcription factors act in networks of homo- and hetero-dimers in the regulation in a diverse set of cellular pathways. Classical leucine zippers have alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization creates a pair of basic regions that bind DNA and undergo conformational change. GCN4 was identified in Saccharomyces cerevisiae from mutations in a deficiency in activation with the general amino acid control pathway. GCN4 encodes a trans-activator of amino acid biosynthetic genes containing 2 acidic activation domains and a C-terminal bZIP domain, comprised of a basic alpha-helical DNA-binding region and a coiled-coil dimerization region. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	317
smart00338	65	BRLZ basic region leucin zipper.	99.1
KOG3584	348	consensus cAMP response element binding protein an	99.1
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	99.09
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	98.99
KOG4005	292	consensus Transcription factor XBP-1 [Transcriptio	98.92
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	98.91
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	98.81
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	97.59
KOG0837	279	consensus Transcriptional activator of the JUN fam	96.91
KOG4571	294	consensus Activating transcription factor 4 [Trans	96.39
KOG3119	269	consensus Basic region leucine zipper transcriptio	96.16
KOG4196	135	consensus bZIP transcription factor MafK [Transcri	95.16
KOG3863	604	consensus bZIP transcription factor NRF1 [Transcri	93.72
KOG1414	395	consensus Transcriptional activator FOSB/c-Fos and	86.51
PF01166	59	TSC22: TSC-22/dip/bun family; InterPro: IPR000580	81.44

>smart00338 BRLZ basic region leucin zipper

Probab=99.10  E-value=2.5e-10  Score=86.08  Aligned_cols=48  Identities=56%  Similarity=0.747  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       246 ~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      ++|+.+|+++||+||++||.||++|+.+||.+|..|+.+|..|..+..
T Consensus         3 ~~k~~rR~~rNR~aA~~~R~rKk~~~~~Le~~~~~L~~en~~L~~~~~   50 (65)
T smart00338        3 DEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIE   50 (65)
T ss_pred             cHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999999998863

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=99.10  E-value=1.2e-10  Score=111.20  Aligned_cols=58  Identities=34%  Similarity=0.566  Sum_probs=50.8

Q ss_pred             hhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhH
Q 021098          240 DMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK-ELEKM  297 (317)
Q Consensus       240 ~~~e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~-elE~~  297 (317)
                      ...|+...||+-|++||||+|+.+|+|||+|+++||++|+.||.+|+.|-+|- -|.++
T Consensus       283 ~~aee~trKRevRLmKNREAARECRRKKKEYVKCLENRVAVLENQNKaLIEELKtLKeL  341 (348)
T KOG3584|consen  283 QGAEEATRKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKALIEELKTLKEL  341 (348)
T ss_pred             ccchhhhhHHHHHHHhhHHHHHHHHHhHhHHHHHHHhHHHHHhcccHHHHHHHHHHHHH
Confidence            44677889999999999999999999999999999999999999999997763 34444

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=99.09  E-value=2.4e-10  Score=116.17  Aligned_cols=52  Identities=46%  Similarity=0.625  Sum_probs=49.5

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          241 MIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       241 ~~e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      .+|.++-||+.|||||||||..||+|||+|+..||.++..|.+||+.|++||
T Consensus       274 ~~d~kv~krqQRmIKNResA~~SRkKKKEy~~~Le~rLq~ll~Ene~Lk~EN  325 (655)
T KOG4343|consen  274 GSDIKVLKRQQRMIKNRESACQSRKKKKEYMLGLEARLQALLSENEQLKKEN  325 (655)
T ss_pred             ccCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4677899999999999999999999999999999999999999999999997

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=98.99  E-value=1.3e-09  Score=82.03  Aligned_cols=48  Identities=52%  Similarity=0.770  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       246 ~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      ..++.+|+++||+||++||.||++|+.+||.+|..|+.+|..|+.++.
T Consensus         3 ~~k~~~rr~rNR~AAr~~R~RKk~~~~~Le~~~~~L~~en~~L~~~~~   50 (64)
T PF00170_consen    3 EDKRERRRERNREAARRSRQRKKQYIEELEEKVEELESENEELKKELE   50 (64)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            568899999999999999999999999999999999999999998763

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>KOG4005 consensus Transcription factor XBP-1 [Transcription]

Probab=98.92  E-value=1.6e-09  Score=101.40  Aligned_cols=62  Identities=37%  Similarity=0.483  Sum_probs=57.0

Q ss_pred             cCCCccCCChhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          230 LLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       230 ~~~rkr~~~~~~~e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      .|.|||.+. +|+ ..+||-+||++|||.+|+-+|.|||+.+.++|.++..|++||+.|+.+++
T Consensus        53 ~~~rKr~RL-~HL-S~EEK~~RrKLKNRVAAQtaRDrKKaRm~eme~~i~dL~een~~L~~en~  114 (292)
T KOG4005|consen   53 QPKRKRRRL-DHL-SWEEKVQRRKLKNRVAAQTARDRKKARMEEMEYEIKDLTEENEILQNEND  114 (292)
T ss_pred             chHHHHHhh-ccc-CHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467999988 667 78999999999999999999999999999999999999999999988765

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=98.91  E-value=4.9e-09  Score=76.76  Aligned_cols=47  Identities=51%  Similarity=0.738  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       246 ~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      ++++.+|. +||+||++||.||++|+.+||.+|..|+.+|..|..+++
T Consensus         3 ~~~~~rR~-rNr~AA~r~R~rkk~~~~~le~~~~~L~~en~~L~~~i~   49 (54)
T PF07716_consen    3 EEKRERRE-RNREAARRSRQRKKQREEELEQEVQELEEENEQLRQEIA   49 (54)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56778888 999999999999999999999999999999999988864

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=98.81  E-value=3.8e-09  Score=106.18  Aligned_cols=52  Identities=38%  Similarity=0.618  Sum_probs=49.1

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       242 ~e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      .|+.+.||.||+|||.+||+.||+|||+|++.||.+|....+||++|+++++
T Consensus       245 aEEriLKrvRRKIrNK~SAQESRrkKkeYid~LE~rv~~~taeNqeL~kkV~  296 (472)
T KOG0709|consen  245 AEERILKRVRRKIRNKRSAQESRRKKKEYIDGLESRVSAFTAENQELQKKVE  296 (472)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHhHhhHHHHHhhhhhhcccCcHHHHHHHH
Confidence            5677889999999999999999999999999999999999999999999874

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=97.59  E-value=6.6e-06  Score=66.36  Aligned_cols=49  Identities=31%  Similarity=0.470  Sum_probs=41.7

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          243 EKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ  291 (317)
Q Consensus       243 e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e  291 (317)
                      +....|..||..|||.+|+.||.||..++.+||.++..|..+.+.|.++
T Consensus        25 q~~~lK~~RRr~KNR~~A~~cR~rk~~~~~~Le~e~~~l~~~~~~L~~e   73 (92)
T PF03131_consen   25 QIAELKQRRRRLKNRGYAQNCRKRKLDQIEELEEEIEQLRQEIEQLQQE   73 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456688999999999999999999999999999998877776666554

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

>KOG0837 consensus Transcriptional activator of the JUN family [Transcription]

Probab=96.91  E-value=0.0025  Score=60.87  Aligned_cols=61  Identities=28%  Similarity=0.313  Sum_probs=45.6

Q ss_pred             CCCccCCChhhhhhHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          231 LGRKRGASEDMIEKTVERRQK-RMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ  291 (317)
Q Consensus       231 ~~rkr~~~~~~~e~~~errqr-RmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e  291 (317)
                      |+++-..+.-.+|..+..|.. ...+||++|.+||+||-.+|..||.+|..|+.+|..|-.+
T Consensus       188 ~~~~~pispid~e~qe~~kleRkrlrnreaa~Kcr~rkLdrisrLEdkv~~lk~~n~~L~~~  249 (279)
T KOG0837|consen  188 PELKEPISPIDMEDQEKIKLERKRLRNREAASKCRKRKLDRISRLEDKVKTLKIYNRDLASE  249 (279)
T ss_pred             cccCCCCCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence            455554442234444444444 4689999999999999999999999999999999887544

>KOG4571 consensus Activating transcription factor 4 [Transcription]

Probab=96.39  E-value=0.0099  Score=57.63  Aligned_cols=51  Identities=35%  Similarity=0.531  Sum_probs=41.3

Q ss_pred             HHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhh
Q 021098          246 VERRQKR-MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK-ELEK  296 (317)
Q Consensus       246 ~errqrR-mikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~-elE~  296 (317)
                      .+++.+| .+.|..+|.|=|+||++-.+.|+-++..|+.+|++||.+. ++|+
T Consensus       224 ~~~~~~rkr~qnk~AAtRYRqKkRae~E~l~ge~~~Le~rN~~LK~qa~~ler  276 (294)
T KOG4571|consen  224 PEKKLRRKRQQNKAAATRYRQKKRAEKEALLGELEGLEKRNEELKDQASELER  276 (294)
T ss_pred             chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444444 5566668999999999999999999999999999999986 3443

>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription]

Probab=96.16  E-value=0.021  Score=54.56  Aligned_cols=53  Identities=34%  Similarity=0.510  Sum_probs=44.9

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          241 MIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       241 ~~e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      +.|++..+-..|..||=++|++||.+.|.-..+...+|..|+.||+.|+.+++
T Consensus       187 ~~~~~~~~y~err~rNN~A~~kSR~~~k~~~~e~~~r~~~leken~~lr~~v~  239 (269)
T KOG3119|consen  187 PVEKKDPEYKERRRRNNEAVRKSRDKRKQKEDEMAHRVAELEKENEALRTQVE  239 (269)
T ss_pred             chhcCCHHHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35555555566667899999999999999889999999999999999999874

>KOG4196 consensus bZIP transcription factor MafK [Transcription]

Probab=95.16  E-value=0.1  Score=45.49  Aligned_cols=49  Identities=24%  Similarity=0.441  Sum_probs=40.5

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       244 ~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      ....|..||-+|||==|+-+|.|+-.--.+||++...|..|.++|+.++
T Consensus        49 VvrlKQrRRTLKNRGYA~sCR~KRv~Qk~eLE~~k~~L~qqv~~L~~e~   97 (135)
T KOG4196|consen   49 VVRLKQRRRTLKNRGYAQSCRVKRVQQKHELEKEKAELQQQVEKLKEEN   97 (135)
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456777789999999999999999999999997777777777776665

>KOG3863 consensus bZIP transcription factor NRF1 [Transcription]

Probab=93.72  E-value=0.049  Score=57.47  Aligned_cols=45  Identities=33%  Similarity=0.482  Sum_probs=40.3

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       248 rrqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      |-.||.=|||.+|+++|+||-.-|..||.+|..|..|-++|.++.
T Consensus       490 rDIRRRgKNkvAAQnCRKRKLd~I~nLE~ev~~l~~eKeqLl~Er  534 (604)
T KOG3863|consen  490 RDIRRRGKNKVAAQNCRKRKLDCILNLEDEVEKLQKEKEQLLRER  534 (604)
T ss_pred             hccccccccchhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            335677799999999999999999999999999999999988764

>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription]

Probab=86.51  E-value=0.088  Score=52.81  Aligned_cols=64  Identities=31%  Similarity=0.413  Sum_probs=51.4

Q ss_pred             CccCCChhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 021098          233 RKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKM  297 (317)
Q Consensus       233 rkr~~~~~~~e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~elE~~  297 (317)
                      .+..+.....+..++++.+=+++||.+|-++|.|||-.+..|+.+...+..+|..|. ..++|.+
T Consensus       270 ~~~~~s~~~~~~p~~~~~~~lern~~aas~~r~~~k~~~~~~~~~~~~~~~~n~~l~-~~~~~~l  333 (395)
T KOG1414|consen  270 TGGVRSRTVDEDPDERRRRFLERNRAAASRCRQKKKVWVLSLEKKAEELSSENGQLL-LNEVELL  333 (395)
T ss_pred             cccccccccCCCchhhhhhhhhhhhhhhccccCCcccccccccccccchhhhhcccc-cchhhHH
Confidence            444434344556777886669999999999999999999999999999999999999 5555554

>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation

Probab=81.44  E-value=2.6  Score=32.20  Aligned_cols=23  Identities=43%  Similarity=0.579  Sum_probs=17.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 021098          269 AYTNELENKVSRLEEENERLRKQ  291 (317)
Q Consensus       269 ay~~eLE~kv~~Le~EN~~L~~e  291 (317)
                      ..|.+|+.++..|+.||.-|+..
T Consensus        21 ~~I~eL~~~n~~Le~EN~~Lk~~   43 (59)
T PF01166_consen   21 EQIAELEERNSQLEEENNLLKQN   43 (59)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            45677888888888888777765

These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Proteins containing this signature include: Vertebrate protein TSC-22 [], a transcriptional regulator which seems to act on C-type natriuretic peptide (CNP) promoter. Mammalian protein DIP (DSIP-immunoreactive peptide) [], a protein whose function is not yet known. Drosophila protein bunched [] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis. Caenorhabditis elegans hypothetical protein T18D3.7. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1DIP_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	317
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	1e-16
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	8e-13
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	4e-11
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	7e-11
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	1e-09
2wt7_B	90	Transcription factor MAFB; transcription, transcri	9e-08
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	1e-07
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	2e-07
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	3e-07
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	2e-06
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	9e-05

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 71.7 bits (176), Expect = 1e-16
 Identities = 22/53 (41%), Positives = 38/53 (71%), Gaps = 1/53 (1%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ-KELEKMFS 299
           +R+ R++KNRE+A  SR +K+ Y   LEN+V+ LE +N+ L ++ K L+ ++S
Sbjct: 1   KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLYS 53

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61

 Score = 61.6 bits (150), Expect = 8e-13
 Identities = 14/44 (31%), Positives = 27/44 (61%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           +R+K + +NR +A+RSR +++ +   LE K   L   N +L+ +
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSE 44

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63

 Score = 57.1 bits (138), Expect = 4e-11
 Identities = 14/45 (31%), Positives = 29/45 (64%)

Query: 247 ERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           E+R+ R  +N+ +AA+ R R++  T+ L+ +  +LE+E   L+ +
Sbjct: 1   EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTE 45

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62

 Score = 56.2 bits (136), Expect = 7e-11
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKEL 294
           + +++ ++NR +A++SR RK      LE KV  L+ +N  L     +
Sbjct: 1   KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANM 47

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63

 Score = 52.4 bits (126), Expect = 1e-09
 Identities = 14/44 (31%), Positives = 28/44 (63%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           ++ K+M +N+ +A R R +K+A    L  +   LE++NE L+++
Sbjct: 2   KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKER 45

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90

 Score = 48.1 bits (114), Expect = 9e-08
 Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 224 TLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEE 283
           ++S  +L    RG ++D  E    ++++R +KNR  A   R ++    + LEN+ ++L +
Sbjct: 5   SMSVRELNRHLRGFTKD--EVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQ 62

Query: 284 ENERLRKQKE 293
           + E+L+++  
Sbjct: 63  QVEQLKQEVS 72

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Length = 87

 Score = 48.1 bits (114), Expect = 1e-07
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 235 RGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           +  ++  ++K  +  + R  +N  +  +SR + +    E ++KV  L  ENERL+K+
Sbjct: 2   KSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKK 58

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63

 Score = 46.4 bits (110), Expect = 2e-07
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE 293
           + ++ +    +  +N E+A RSRARK     +LE+KV  L  +N  L  +  
Sbjct: 3   VPESSDPAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVA 54

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107

 Score = 47.4 bits (112), Expect = 3e-07
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 216 GLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELE 275
            LT   + T+S  +L    RG S++  E    ++++R +KNR  AA  R ++     ELE
Sbjct: 7   SLTDEELVTMSVRELNQHLRGLSKE--EIIQLKQRRRTLKNRGYAASCRVKRVTQKEELE 64

Query: 276 NKVSRLEEENERLRKQKE 293
            + + L++E E+L  +  
Sbjct: 65  KQKAELQQEVEKLASENA 82

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Length = 78

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 234 KRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           K  A + + + + E + +R  +N  +  +SR + +    E ++KV  L  ENERL+K+
Sbjct: 2   KSKAKKTVDKHSDEYKIRRE-RNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKK 58

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Length = 70

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKEL 294
              E   KR  +NR +    R RK+ +   LE +V  L+E +     + + 
Sbjct: 4   SDQEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQ 54

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 6e-05
 Identities = 50/335 (14%), Positives = 103/335 (30%), Gaps = 89/335 (26%)

Query: 2   LMRGMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDE-- 59
           ++  +Q +  Q D         +   +  +S   L +  +Q +L  L   L S   +   
Sbjct: 198 VLEMLQKLLYQID-------PNWTSRSDHSSNIKLRIHSIQAELRRL---LKSKPYENCL 247

Query: 60  -LLKNVWTAEV----EMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGE 114
            +L NV  A+      +    L   T+  R     +T  LS  T   +  D         
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILL--TT--RFK--QVTDFLSAATTTHISLD--------- 292

Query: 115 KKPRDRQATLGEMTLEDFLVKAGVVAEASSD-----KKIDGPVVGVDQNVVPHFPQQGP- 168
                   TL    ++  L+K   +     D        + P      +++    + G  
Sbjct: 293 ----HHSMTLTPDEVKSLLLK--YLDCRPQDLPREVLTTN-PRR---LSIIAESIRDGLA 342

Query: 169 -WMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVM-----DVS-FPENQVGLTSPS 221
            W  + H      + + +        I   +N++  A        +S FP +   + +  
Sbjct: 343 TWDNWKH--VNCDKLTTI--------IESSLNVLEPAEYRKMFDRLSVFPPS-AHIPTIL 391

Query: 222 MGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYT-----NELEN 276
           +  +              D+I+  V     ++ K   S    + ++   +      EL+ 
Sbjct: 392 LSLI------------WFDVIKSDVMVVVNKLHK--YSLVEKQPKESTISIPSIYLELKV 437

Query: 277 KVSRLEEENERLRKQKELEKMFS----APPPQPKY 307
           K+      +  +     + K F      PP   +Y
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY 472

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 41.7 bits (97), Expect = 9e-05
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 233 RKRGASEDMIEKTVERRQKRMIKNRESAARSRA--RKQAYTNELENKVSRLEEENERLRK 290
           R     E  I K  E ++KR+ +   ++       R++A   +LE    R  E+ E+ + 
Sbjct: 79  RLTQEPE-SIRKWREEQRKRLQELDAASKVMEQEWREKA-KKDLEEWNQRQSEQVEKNKI 136

Query: 291 Q-KELEKMFSA 300
             +  +K F  
Sbjct: 137 NNRIADKAFYQ 147

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	317
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	99.48
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	99.15
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	99.06
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	99.04
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	98.95
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	98.51
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	98.17
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	98.15
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	98.06
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	98.03
2wt7_B	90	Transcription factor MAFB; transcription, transcri	97.54
1skn_P	92	DNA-binding domain of SKN-1; complex (transcriptio	94.72
2oqq_A	42	Transcription factor HY5; homodimer leucine zipper	94.2
3s9g_A	104	Protein hexim1; cyclin T-binding domain (TBD), cyc	92.61
2c9l_Y	63	EB1, zebra, BZLF1 trans-activator protein; viral p	89.81
3he5_A	49	Synzip1; heterodimeric coiled-coil, de novo protei	83.81
2oxj_A	34	Hybrid alpha/beta peptide based on the GCN4-P1 Se	83.18
1dip_A	78	Delta-sleep-inducing peptide immunoreactive peptid	83.0
3m48_A	33	General control protein GCN4; leucine zipper, synt	81.75

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=99.48  E-value=5.5e-14  Score=103.11  Aligned_cols=46  Identities=41%  Similarity=0.679  Sum_probs=43.9

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       248 rrqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      |+++||++||+||++||.||++|+++||.+|..|+.||..|+.+.+
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~   46 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELK   46 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999864

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=99.15  E-value=8e-11  Score=88.08  Aligned_cols=46  Identities=30%  Similarity=0.527  Sum_probs=44.1

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          247 ERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       247 errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      |||++|+++||+||++||.||++|+.+||.+|..|+.+|..|..+.
T Consensus         1 Ekr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei   46 (63)
T 2wt7_A            1 EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEI   46 (63)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999999875

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=99.06  E-value=3e-10  Score=84.25  Aligned_cols=46  Identities=30%  Similarity=0.518  Sum_probs=43.7

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       248 rrqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      ||++|+++||++|++||.||++|+.+||.+|..|+.+|..|..+.+
T Consensus         1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~   46 (61)
T 1t2k_D            1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVT   46 (61)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999999999863

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=99.04  E-value=3.4e-10  Score=84.99  Aligned_cols=46  Identities=35%  Similarity=0.406  Sum_probs=39.4

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       248 rrqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      +..++..+||+||++||.||++|+.+||.+|..|+.+|..|..+.+
T Consensus         9 ~~~~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~   54 (63)
T 2dgc_A            9 PAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVA   54 (63)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334445699999999999999999999999999999999998864

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=98.95  E-value=1.6e-09  Score=80.53  Aligned_cols=46  Identities=30%  Similarity=0.484  Sum_probs=42.5

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       248 rrqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      |+.+|..+||+||++||.||++|+.+||.+|..|+.+|..|..+..
T Consensus         1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~   46 (62)
T 1jnm_A            1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTAN   46 (62)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3567888999999999999999999999999999999999999863

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=98.51  E-value=1.2e-07  Score=70.91  Aligned_cols=45  Identities=31%  Similarity=0.522  Sum_probs=37.9

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       248 rrqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      |+++++.+||.+|+|+|.||++++.+||.++..|+.+|..|+.+.
T Consensus         2 k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i   46 (63)
T 1ci6_A            2 KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERA   46 (63)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            577888999999999999999999999999999999999999875

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=98.17  E-value=4.8e-06  Score=63.76  Aligned_cols=44  Identities=27%  Similarity=0.337  Sum_probs=39.7

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          250 QKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       250 qrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      .+|...||.|++..|.||++|+.+||.+|..|+.+|..|..+++
T Consensus        10 ~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~   53 (70)
T 1gd2_E           10 SKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLEND   53 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46778999999999999999999999999999988888877764

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=98.15  E-value=4.8e-06  Score=64.99  Aligned_cols=51  Identities=31%  Similarity=0.395  Sum_probs=43.7

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          243 EKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       243 e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      |+..+.-..|..||.++|++||.++++...+++.++..|+.||..|+.+.+
T Consensus        10 dk~d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~   60 (78)
T 1gu4_A           10 DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVE   60 (78)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444445567999999999999999999999999999999999999864

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=98.06  E-value=8.8e-06  Score=64.71  Aligned_cols=51  Identities=31%  Similarity=0.395  Sum_probs=44.3

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          243 EKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       243 e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      |+..++-..|..||.++|++||.++++...+++.++..|+.||..|+.+.+
T Consensus        10 dk~d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~   60 (87)
T 1hjb_A           10 DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVE   60 (87)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444455555677999999999999999999999999999999999999863

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=98.03  E-value=7.8e-07  Score=73.28  Aligned_cols=51  Identities=29%  Similarity=0.432  Sum_probs=43.6

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       242 ~e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      .|....|.+||..|||.+|+.||.||.+.+.+||.++..|..+.+.|..++
T Consensus        31 ~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En   81 (107)
T 3a5t_A           31 EEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASEN   81 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTT
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999988877777777776654

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A

Probab=97.54  E-value=0.00034  Score=55.95  Aligned_cols=50  Identities=26%  Similarity=0.393  Sum_probs=45.0

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          243 EKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       243 e~~~errqrRmikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      +....|..||-.|||..|+.||.||..-..+||.++..|..+.+.|++++
T Consensus        22 ev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~   71 (90)
T 2wt7_B           22 EVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEV   71 (90)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34567888899999999999999999999999999999998888888875

>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1

Probab=94.72  E-value=0.017  Score=46.17  Aligned_cols=34  Identities=21%  Similarity=0.373  Sum_probs=28.3

Q ss_pred             hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 021098          243 EKTVERRQKRMIKNRESAARSRARKQAYTNELEN  276 (317)
Q Consensus       243 e~~~errqrRmikNReSA~rSR~RKkay~~eLE~  276 (317)
                      +....|..||..|||.+|+++|+||.+-+.+|+.
T Consensus        57 Ql~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~   90 (92)
T 1skn_P           57 QRQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH   90 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence            3467888999999999999999999998887763

>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}

Probab=94.20  E-value=0.042  Score=38.06  Aligned_cols=25  Identities=44%  Similarity=0.667  Sum_probs=20.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          268 QAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       268 kay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      |||+.+||.+++.|+..|.+|..+.
T Consensus         2 KaYl~eLE~r~k~le~~naeLEerv   26 (42)
T 2oqq_A            2 SAYLSELENRVKDLENKNSELEERL   26 (42)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHH
Confidence            5889999988888888888887664

>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A

Probab=92.61  E-value=0.54  Score=38.15  Aligned_cols=27  Identities=41%  Similarity=0.503  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          268 QAYTNELENKVSRLEEENERLRKQKEL  294 (317)
Q Consensus       268 kay~~eLE~kv~~Le~EN~~L~~e~el  294 (317)
                      -+.+.+||.+|..|..||+.|++++++
T Consensus        64 ~~~v~eLe~everL~~ENq~L~~e~~~   90 (104)
T 3s9g_A           64 DARVRELELELDRLRAENLQLLTENEL   90 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            366899999999999999999999885

>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y

Probab=89.81  E-value=1.2  Score=32.72  Aligned_cols=39  Identities=31%  Similarity=0.353  Sum_probs=30.0

Q ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          253 MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ  291 (317)
Q Consensus       253 mikNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~e  291 (317)
                      .-|||.+++++|+|=+..++-...-.+.-.+||++|+--
T Consensus         6 ryknr~asrk~rakfkn~lqh~r~vaaaks~en~rlr~l   44 (63)
T 2c9l_Y            6 RYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRLRLL   44 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence            358999999999998776666655555667889988753

>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}

Probab=83.81  E-value=1.2  Score=30.93  Aligned_cols=23  Identities=48%  Similarity=0.722  Sum_probs=20.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 021098          270 YTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      .+..||.+|..|+.||+.|++++
T Consensus         4 lvaqlenevaslenenetlkkkn   26 (49)
T 3he5_A            4 LVAQLENEVASLENENETLKKKN   26 (49)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcccHHHHHhc
Confidence            46789999999999999999875

>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*

Probab=83.18  E-value=1.2  Score=29.51  Aligned_cols=24  Identities=29%  Similarity=0.361  Sum_probs=21.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          270 YTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      .+..||.+|..|-.+|..|..+++
T Consensus         2 RMnQLE~kVEeLl~~n~~Le~eV~   25 (34)
T 2oxj_A            2 RMXQLEXKVXELLXKNXHLEXEVX   25 (34)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhhhhHHHHHH
Confidence            468899999999999999998864

>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1

Probab=83.00  E-value=1.2  Score=34.35  Aligned_cols=25  Identities=36%  Similarity=0.384  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          268 QAYTNELENKVSRLEEENERLRKQK  292 (317)
Q Consensus       268 kay~~eLE~kv~~Le~EN~~L~~e~  292 (317)
                      |+.|.+|+.++++||.||.-|+.-.
T Consensus        21 Ke~I~EL~e~~~qLE~EN~~Lk~~a   45 (78)
T 1dip_A           21 KEQIRELVEKNSQLERENTLLKTLA   45 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3668899999999999999988764

>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A

Probab=81.75  E-value=1.2  Score=29.30  Aligned_cols=23  Identities=30%  Similarity=0.334  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 021098          271 TNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       271 ~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      +..||.||..|-.+|..|..+++
T Consensus         2 M~QLE~kVEeLl~~n~~Le~EV~   24 (33)
T 3m48_A            2 MAQLEAKVEELLSKNWNLENEVA   24 (33)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhHHHHHHHH
Confidence            56899999999999999988863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	317
d1uklc_	61	SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}	85.86
d1sknp_	74	Skn-1 {Caenorhabditis elegans [TaxId: 6239]}	85.09

>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.86  E-value=0.44  Score=32.89  Aligned_cols=25  Identities=24%  Similarity=0.353  Sum_probs=23.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021098          269 AYTNELENKVSRLEEENERLRKQKE  293 (317)
Q Consensus       269 ay~~eLE~kv~~Le~EN~~L~~e~e  293 (317)
                      .|+..|+.++..|++|+..|+.+.+
T Consensus        33 ~YI~~Lq~~~~~L~~e~~~L~~~~~   57 (61)
T d1uklc_          33 DYIKYLQQVNHKLRQENMVLKLANQ   57 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999998764

>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: A DNA-binding domain in eukaryotic transcription factors
superfamily: A DNA-binding domain in eukaryotic transcription factors
family: A DNA-binding domain in eukaryotic transcription factors
domain: Skn-1
species: Caenorhabditis elegans [TaxId: 6239]

Probab=85.09  E-value=0.2  Score=36.74  Aligned_cols=29  Identities=24%  Similarity=0.355  Sum_probs=24.2

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 021098          244 KTVERRQKRMIKNRESAARSRARKQAYTN  272 (317)
Q Consensus       244 ~~~errqrRmikNReSA~rSR~RKkay~~  272 (317)
                      ....+-.||.=||+.+|+.+|+||-....
T Consensus        44 l~lirDIRRRGKNKvAAqnCRKRKld~~d   72 (74)
T d1sknp_          44 RQLIRKIRRRGKNKVAARTCRQRRTDRHD   72 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcccHHHHHHHHHhhhhhhc
Confidence            45678889999999999999999976543