Citrus Sinensis ID: 021108

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
MECRSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
cccccccccccHHHcHHHHHcccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHcccccccccHHHHccccEEEEEEEEccccccHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEccccEEEcHHHHHHHHHcccccccEEEEEEEcccccccccccEEEccccccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHHcccEEEccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHcccccHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHccccHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEccccccccccccEEEcccEEccccccccccccccccEEEEcHHHHHHHHHccHHHHHHcHccccHHHHHHcccEEEEccccccccccccccEEEcccccEEEEEEEccccccccHHHHHHHHHHHccccccEEEEEc
mecrsqdkrldglKTKITAVraerdsvslshpvkgtsnisgsmlKRKYFMVIGINTafssrkrrdsvratwmpqgekRKMLEEAKGIIIRFVIghsatsggildKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLaahrtkprvyvgcmksgpvlarkgvkyyepeywkfgeignkyfRHATGQLYALSKDLATYISINQHLLHKyanedvslgswfigldvehvddrrlccgtppdcewkaqlgktcvatfdwrcsgickSVERIKEVHELCGEGEDTLWRASF
mecrsqdkrldglktkitavraerdsvslshpvkgtsnisgsmlkrKYFMVIGINtafssrkrrdsvratwmpqgekrkMLEEAKGIIIRFvighsatsGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTlaahrtkprvyvgcmksgpvlarkgvKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGtppdcewkaqlgKTCVATFDWRCSGICKSVERIKEVhelcgegedtlwrasf
MECRSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
******************************************MLKRKYFMVIGINTAFS*********************LEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLW****
*******KRLDGLKTKITAVR***************************FMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
*********LDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFS*********ATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
MECRSQDKRLDGLKTKITAVRAER********************KRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MECRSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query317 2.2.26 [Sep-21-2011]
A8MRC7407 Probable beta-1,3-galacto yes no 0.981 0.764 0.726 1e-142
Q9SAA4384 Probable beta-1,3-galacto no no 0.958 0.791 0.741 1e-138
Q9ZV71409 Probable beta-1,3-galacto no no 0.990 0.767 0.713 1e-133
Q8LEJ9407 Probable beta-1,3-galacto no no 0.987 0.769 0.710 1e-131
Q9MAP8399 Probable beta-1,3-galacto no no 0.990 0.786 0.659 1e-128
Q6NQB7393 Beta-1,3-galactosyltransf no no 0.952 0.768 0.666 1e-126
Q9LM60398 Probable beta-1,3-galacto no no 0.974 0.776 0.629 1e-120
Q9C809395 Probable beta-1,3-galacto no no 0.858 0.688 0.702 1e-117
Q94F27338 Probable beta-1,3-galacto no no 0.810 0.760 0.456 2e-64
Q5XEZ1346 Probable beta-1,3-galacto no no 0.709 0.650 0.495 1e-57
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1 Back     alignment and function desciption
 Score =  503 bits (1296), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 226/311 (72%), Positives = 268/311 (86%)

Query: 7   DKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDS 66
           DK +  L+ ++ A R+ ++S+    P+           +R++ MV+GINTAFSSRKRRDS
Sbjct: 97  DKTISSLEMELAAARSVQESLQNGAPLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDS 156

Query: 67  VRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGY 126
           +RATWMPQGEKRK LEE KGIIIRFVIGHSAT+GGILD+AI+AE++ HGDFLRL+H+EGY
Sbjct: 157 IRATWMPQGEKRKRLEEEKGIIIRFVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGY 216

Query: 127 LELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPV 186
           LELS KTKTYF+TA SMWDA+FY+KVDDDVHVN+ATLG TL  HR KPRVY+GCMKSGPV
Sbjct: 217 LELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPV 276

Query: 187 LARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLG 246
           L++KGV+Y+EPEYWKFGE GNKYFRHATGQLYA+S+DLA+YISINQH+LHKYANEDVSLG
Sbjct: 277 LSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISINQHVLHKYANEDVSLG 336

Query: 247 SWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCG 306
           +WFIG+DV+H+DDRRLCCGTPPDCEWKAQ G  CVA+FDW CSGIC+S +RIKEVH  CG
Sbjct: 337 AWFIGIDVKHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCG 396

Query: 307 EGEDTLWRASF 317
           EGE  LW A+F
Sbjct: 397 EGEKALWSATF 407
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2 Back     alignment and function description
>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1 Back     alignment and function description
>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1 Back     alignment and function description
>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1 Back     alignment and function description
>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1 Back     alignment and function description
>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1 Back     alignment and function description
>sp|Q5XEZ1|B3GT9_ARATH Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query317
147776969373 hypothetical protein VITISV_007689 [Viti 0.990 0.841 0.757 1e-146
359494046411 PREDICTED: probable beta-1,3-galactosylt 0.990 0.763 0.757 1e-145
359494044405 PREDICTED: probable beta-1,3-galactosylt 0.990 0.775 0.757 1e-145
224128958405 predicted protein [Populus trichocarpa] 0.990 0.775 0.751 1e-144
224113649414 predicted protein [Populus trichocarpa] 0.955 0.731 0.758 1e-143
356517642407 PREDICTED: probable beta-1,3-galactosylt 0.977 0.761 0.756 1e-143
356542818406 PREDICTED: probable beta-1,3-galactosylt 0.977 0.763 0.758 1e-143
449463262407 PREDICTED: probable beta-1,3-galactosylt 0.990 0.771 0.745 1e-142
255554873388 Beta-1,3-galactosyltransferase sqv-2, pu 0.968 0.791 0.767 1e-141
224078598380 predicted protein [Populus trichocarpa] 0.958 0.8 0.752 1e-141
>gi|147776969|emb|CAN63417.1| hypothetical protein VITISV_007689 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 238/314 (75%), Positives = 275/314 (87%)

Query: 4   RSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKR 63
           ++ DK +  L+ ++ A RA ++S+    P+     I+ S  +RKY MVIGINTAFSSRKR
Sbjct: 60  QTLDKTISNLEMELAAARAAQESILNGSPITEDLPITKSSGRRKYLMVIGINTAFSSRKR 119

Query: 64  RDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHI 123
           RDSVRATWMPQG+KRK LEE KGII+RFVIGHSATSGGILD+AI+AE++ HGDFLRLEH+
Sbjct: 120 RDSVRATWMPQGDKRKKLEEEKGIIVRFVIGHSATSGGILDRAIEAEDRRHGDFLRLEHV 179

Query: 124 EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKS 183
           EGYLELSAKTK YFATAV+MWDA+FY+KVDDDVHVN+ATLG TLA HR+KPR+Y+GCMKS
Sbjct: 180 EGYLELSAKTKAYFATAVAMWDADFYVKVDDDVHVNIATLGATLARHRSKPRIYIGCMKS 239

Query: 184 GPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDV 243
           GPVLA+KGV+Y+EPEYWKFGE GNKYFRHATGQLYA+SKDLATYISINQH+LHKYANEDV
Sbjct: 240 GPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISKDLATYISINQHVLHKYANEDV 299

Query: 244 SLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHE 303
           SLGSWFIGLD EH+DDRRLCCGTPPDCEWKAQ G  CVA+FDW CSGIC+S ERI+EVH 
Sbjct: 300 SLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSSERIREVHR 359

Query: 304 LCGEGEDTLWRASF 317
            CGEGE+ +W A F
Sbjct: 360 RCGEGENAVWSAVF 373

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359494046|ref|XP_002279828.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494044|ref|XP_002279814.2| PREDICTED: probable beta-1,3-galactosyltransferase 2-like isoform 1 [Vitis vinifera] gi|297737446|emb|CBI26647.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224128958|ref|XP_002320464.1| predicted protein [Populus trichocarpa] gi|222861237|gb|EEE98779.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113649|ref|XP_002316532.1| predicted protein [Populus trichocarpa] gi|222859597|gb|EEE97144.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356517642|ref|XP_003527496.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|356542818|ref|XP_003539862.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449463262|ref|XP_004149353.1| PREDICTED: probable beta-1,3-galactosyltransferase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255554873|ref|XP_002518474.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] gi|223542319|gb|EEF43861.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224078598|ref|XP_002305569.1| predicted protein [Populus trichocarpa] gi|222848533|gb|EEE86080.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query317
TAIR|locus:2207225407 AT1G05170 [Arabidopsis thalian 0.981 0.764 0.726 3.9e-131
TAIR|locus:2062545409 AT2G32430 [Arabidopsis thalian 0.981 0.760 0.720 8.4e-129
TAIR|locus:2116452407 AT4G26940 [Arabidopsis thalian 0.977 0.761 0.717 2.3e-126
TAIR|locus:2027352384 AT1G11730 [Arabidopsis thalian 0.958 0.791 0.741 2.9e-126
TAIR|locus:2038031399 AT1G32930 [Arabidopsis thalian 0.990 0.786 0.659 2e-118
TAIR|locus:2029471393 AT1G77810 [Arabidopsis thalian 0.971 0.783 0.678 1.6e-116
TAIR|locus:505006138398 DD46 [Arabidopsis thaliana (ta 0.971 0.773 0.634 8.4e-113
TAIR|locus:2154247338 AT5G53340 [Arabidopsis thalian 0.804 0.754 0.467 1.3e-61
TAIR|locus:2116627345 AT4G32120 [Arabidopsis thalian 0.798 0.733 0.430 7.8e-55
TAIR|locus:2059531346 AT2G25300 [Arabidopsis thalian 0.709 0.650 0.495 1.3e-54
TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
 Identities = 226/311 (72%), Positives = 268/311 (86%)

Query:     7 DKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDS 66
             DK +  L+ ++ A R+ ++S+    P+           +R++ MV+GINTAFSSRKRRDS
Sbjct:    97 DKTISSLEMELAAARSVQESLQNGAPLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDS 156

Query:    67 VRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGY 126
             +RATWMPQGEKRK LEE KGIIIRFVIGHSAT+GGILD+AI+AE++ HGDFLRL+H+EGY
Sbjct:   157 IRATWMPQGEKRKRLEEEKGIIIRFVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGY 216

Query:   127 LELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPV 186
             LELS KTKTYF+TA SMWDA+FY+KVDDDVHVN+ATLG TL  HR KPRVY+GCMKSGPV
Sbjct:   217 LELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPV 276

Query:   187 LARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLG 246
             L++KGV+Y+EPEYWKFGE GNKYFRHATGQLYA+S+DLA+YISINQH+LHKYANEDVSLG
Sbjct:   277 LSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLASYISINQHVLHKYANEDVSLG 336

Query:   247 SWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCG 306
             +WFIG+DV+H+DDRRLCCGTPPDCEWKAQ G  CVA+FDW CSGIC+S +RIKEVH  CG
Sbjct:   337 AWFIGIDVKHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCG 396

Query:   307 EGEDTLWRASF 317
             EGE  LW A+F
Sbjct:   397 EGEKALWSATF 407
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A8MRC7B3GT2_ARATH2, ., 4, ., 1, ., -0.72660.98100.7641yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.79LOW CONFIDENCE prediction!
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 0.0
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 2e-59
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 5e-05
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  561 bits (1446), Expect = 0.0
 Identities = 238/311 (76%), Positives = 273/311 (87%)

Query: 7   DKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDS 66
           DK +  L+ ++ A RA ++S+    P+      + S  KR+Y MV+GINTAFSSRKRRDS
Sbjct: 98  DKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDS 157

Query: 67  VRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGY 126
           VRATWMPQGEKRK LEE KGIIIRFVIGHSATSGGILD+AI+AE++ HGDFLRL+H+EGY
Sbjct: 158 VRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGY 217

Query: 127 LELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKSGPV 186
           LELSAKTKTYFATAV+MWDA+FY+KVDDDVHVN+ATLG TL  HR KPRVY+GCMKSGPV
Sbjct: 218 LELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPV 277

Query: 187 LARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLG 246
           L++KGV+Y+EPEYWKFGE GNKYFRHATGQLYA+SKDLA+YISINQH+LHKYANEDVSLG
Sbjct: 278 LSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYANEDVSLG 337

Query: 247 SWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCG 306
           SWFIGLDVEH+DDRRLCCGTPPDCEWKAQ G  CVA+FDW CSGIC+S +RIKEVH  CG
Sbjct: 338 SWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCG 397

Query: 307 EGEDTLWRASF 317
           EGE+ LW A+F
Sbjct: 398 EGENALWSATF 408

Length = 408
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 317
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.84
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.76
PLN03153 537 hypothetical protein; Provisional 99.34
KOG3708 681 consensus Uncharacterized conserved protein [Funct 98.22
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 96.51
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 96.36
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 95.81
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 95.5
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 95.33
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 94.45
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 94.23
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 93.17
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 92.91
PF04646 255 DUF604: Protein of unknown function, DUF604; Inter 92.55
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 92.27
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 92.18
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 92.07
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 91.85
PRK11204 420 N-glycosyltransferase; Provisional 91.8
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 91.23
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 91.16
cd06423180 CESA_like CESA_like is the cellulose synthase supe 89.93
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 89.83
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 89.81
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 89.56
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 89.35
PRK14583 444 hmsR N-glycosyltransferase; Provisional 89.25
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 88.13
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 87.53
cd06438183 EpsO_like EpsO protein participates in the methano 86.72
COG1215 439 Glycosyltransferases, probably involved in cell wa 86.51
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 86.26
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 86.09
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 85.38
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 84.98
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 84.69
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 81.45
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 80.55
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.3e-76  Score=563.87  Aligned_cols=314  Identities=76%  Similarity=1.302  Sum_probs=287.3

Q ss_pred             hhhhhhHHHHhhhhhHHHhhcccccCCCCCcCccCCCCCCCCCceeEEEEEECCCCCHHHHHHHHHHhhhcchhhhhhhc
Q 021108            4 RSQDKRLDGLKTKITAVRAERDSVSLSHPVKGTSNISGSMLKRKYFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEE   83 (317)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~V~S~p~~~~rR~aIR~TW~~~~~~~~~l~~   83 (317)
                      ++|+|+|+.|+.+.++++..+...-.+.|+.+++...+...+++++|+|+|+|+|+|++||+|||+|||+......+++.
T Consensus        95 ~~~~~~~~~le~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle~  174 (408)
T PLN03193         95 QTLDKTISNLEMELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEE  174 (408)
T ss_pred             HHHhhhhhHHhHHHHHHHhhhhhhccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHHHHcCCccccccccc
Confidence            68999999999999999998775555667766555557788899999999999999999999999999997654444445


Q ss_pred             cCcEEEEEEeecCCCCCchhHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHHhcCCceEEEEecCceeeeHHHH
Q 021108           84 AKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHIEGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATL  163 (317)
Q Consensus        84 ~~~v~~~FvlG~~~~~~~~~~~~L~~E~~~~~DIi~~df~Dsy~NLt~Ktl~~l~w~~~~~~~~fvlK~DDD~fVn~~~L  163 (317)
                      ..+++++||+|.+.+.++.++.+|++|+++|||||++||.|+|.|||+||+++|+|+.++++++|+||+|||+|||+++|
T Consensus       175 ~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVnv~~L  254 (408)
T PLN03193        175 EKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATL  254 (408)
T ss_pred             CCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEcHHHH
Confidence            67899999999987545688999999999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHhhcCCCCceeEEEeeccceeccCCCcccccccccccCCCCccCcCcCCCeeeecHHHHHHHHHhccccCCCCCChH
Q 021108          164 GMTLAAHRTKPRVYVGCMKSGPVLARKGVKYYEPEYWKFGEIGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDV  243 (317)
Q Consensus       164 ~~~L~~~~~~~~ly~G~~~~~pv~r~~~~K~yvp~~~~~~~~~~~yP~Y~~G~gYvlS~~l~~~l~~~~~~~~~~~~EDv  243 (317)
                      +.+|.....++++|+|++..+|++.+++.|||+|++|.|+++++.|||||+|+|||||+++|+.|+.++..++.|++|||
T Consensus       255 ~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~L~~y~~EDV  334 (408)
T PLN03193        255 GETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYANEDV  334 (408)
T ss_pred             HHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHHhChhhhcccCcchh
Confidence            99998776666899999988888555677888998888888899999999999999999999999999889999999999


Q ss_pred             HHHHHHhhCCCeEecCCCcccCCCCCcccccccCCcccccccccccccchhHHHHHHhhccCccchhhhccccC
Q 021108          244 SLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQLGKTCVATFDWRCSGICKSVERIKEVHELCGEGEDTLWRASF  317 (317)
Q Consensus       244 ~vG~~l~~l~v~~~~~~~F~~~~~~~~~~k~~~~~~C~~~~~~~~~~~~~~~~~l~~~H~~~p~~m~~~W~~~~  317 (317)
                      +||+||.+|+|+++|+++||++.++.|+||+..+++|.++|+|+|+|+|++..+|..+|+.|+++..++|.++|
T Consensus       335 ~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~~~~~~csg~c~~~~~~~~~h~~c~~~~~~~~~~~~  408 (408)
T PLN03193        335 SLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSATF  408 (408)
T ss_pred             hhhhHhccCCceeeecccccCCCCccccccccCCCeeEEEecccCcccCCHHHHHHHHHHhcCCCcccceeecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999886

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.7 bits (102), Expect = 6e-05
 Identities = 41/284 (14%), Positives = 76/284 (26%), Gaps = 87/284 (30%)

Query: 82  EEAKGII--------IRFVIGHSATSG-GILDKAIDAEEKMHGDFLRLEHI-EGYLELSA 131
           EE   II           +     +    ++ K ++   +++  FL +  I     + S 
Sbjct: 49  EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL-MSPIKTEQRQPSM 107

Query: 132 KTKTYFATAVSMW-DAEFYIKVDDDVHVNLATLGMTL--AAHRTKPRVYV------GCMK 182
            T+ Y      ++ D + + K     +V+     + L  A    +P   V      G  K
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKY----NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 183 SGPVLARKGVKYYEPE-------YW-KFG---------EIGNKYFRHATGQLYALSKDLA 225
           +   +A      Y+ +       +W             E+  K          + S   +
Sbjct: 164 T--WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 226 TYI----SINQHL-----LHKYANEDVSLGSWFIGLDVEHVDDRRLCCGTPPDCEWKAQL 276
                  SI   L        Y N    L      L + +V + +          W A  
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYEN---CL------LVLLNVQNAKA---------WNA-- 261

Query: 277 GKTCVATFDWRC--------SGICKSVERIKEVHELCGEGEDTL 312
                  F+  C          +   +      H        TL
Sbjct: 262 -------FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query317
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.95
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 95.33
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 94.29
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 93.99
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 93.17
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 93.09
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 87.12
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 83.23
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 82.18
3bcv_A240 Putative glycosyltransferase protein; protein stru 80.25
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=99.95  E-value=5.5e-28  Score=224.70  Aligned_cols=193  Identities=17%  Similarity=0.182  Sum_probs=132.2

Q ss_pred             ceeEEEEEECCCC-CHHHHHHHHHHhhhcchhhhhhhccCcEEEEEEeecCCCCCchhHHHHHHHHhhcCCEEEEecc--
Q 021108           47 KYFMVIGINTAFS-SRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGDFLRLEHI--  123 (317)
Q Consensus        47 ~~~lli~V~S~p~-~~~rR~aIR~TW~~~~~~~~~l~~~~~v~~~FvlG~~~~~~~~~~~~L~~E~~~~~DIi~~df~--  123 (317)
                      .-.|+|+|+|+++ +.+|+++||+||++....       .    +|+.+...  ++.+    ...  ..+++++.++.  
T Consensus        12 ~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-------~----~fifsd~~--d~~l----~~~--~~~~~~~~~~~~~   72 (280)
T 2j0a_A           12 LGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-------Q----TFIFTDSP--DERL----QER--LGPHLVVTQCSAE   72 (280)
T ss_dssp             GGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-------G----EEEEESSC--CHHH----HHH--HGGGEEECCC---
T ss_pred             cccEEEEEECcHHHHHHHHHHHHHHHhccCCC-------c----eEEEcCCC--cccc----ccc--ccccceecccccc
Confidence            4568889999998 557889999999987631       1    23333322  1222    221  24678887764  


Q ss_pred             ccccchhHHHHHHHHHHHhcCCceEEEEecCceeeeHHHHHHHHhhcCCCCceeEEEeec-cceeccCCCcccccccccc
Q 021108          124 EGYLELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTKPRVYVGCMKS-GPVLARKGVKYYEPEYWKF  202 (317)
Q Consensus       124 Dsy~NLt~Ktl~~l~w~~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~ly~G~~~~-~pv~r~~~~K~yvp~~~~~  202 (317)
                      +++.+++.|+...+++.. +++++|++|+|||+||++++|+++|...++.+++|+|.... .|. |.   ++++|.+.+ 
T Consensus        73 ~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~-~~---~~~~~~~~~-  146 (280)
T 2j0a_A           73 HSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPI-HA---SELQSKQRT-  146 (280)
T ss_dssp             ----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC--------------------
T ss_pred             ccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccc-cc---cccCccccc-
Confidence            477899999999998764 36999999999999999999999999999999999999753 343 31   345554322 


Q ss_pred             cCCCCccCcCcCCCeeeecHHHHHHHHHhcccc-------CCCCCChHHHHHHHh-hCCCeEecCCCcccCC
Q 021108          203 GEIGNKYFRHATGQLYALSKDLATYISINQHLL-------HKYANEDVSLGSWFI-GLDVEHVDDRRLCCGT  266 (317)
Q Consensus       203 ~~~~~~yP~Y~~G~gYvlS~~l~~~l~~~~~~~-------~~~~~EDv~vG~~l~-~l~v~~~~~~~F~~~~  266 (317)
                        +...|+.+.+|+|||||++++++|+......       .....||+++|+||. .+||.+.+.++|+...
T Consensus       147 --~~~~~~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~  216 (280)
T 2j0a_A          147 --KLVRFWFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHL  216 (280)
T ss_dssp             ------CCEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSS
T ss_pred             --cccccCcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCC
Confidence              2234543346789999999999999854332       122368999999998 9999999999998654
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query317
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 93.81
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.81  E-value=1.1  Score=38.25  Aligned_cols=195  Identities=11%  Similarity=0.017  Sum_probs=97.1

Q ss_pred             eeEEEEEECCCCCHHHHHHHHHHhhhcchhhhhhhccCcEEEEEEeecCCCCCchhHHHHHHHHhhcCC-EEEEeccccc
Q 021108           48 YFMVIGINTAFSSRKRRDSVRATWMPQGEKRKMLEEAKGIIIRFVIGHSATSGGILDKAIDAEEKMHGD-FLRLEHIEGY  126 (317)
Q Consensus        48 ~~lli~V~S~p~~~~rR~aIR~TW~~~~~~~~~l~~~~~v~~~FvlG~~~~~~~~~~~~L~~E~~~~~D-Ii~~df~Dsy  126 (317)
                      |.+=|+|++.-..   +..|.+|-.+....   ........++.|-..++  +++....+++-.+.+.+ |..+...   
T Consensus        22 P~vSIIIp~yNe~---~~~l~~~l~Si~~q---t~~~~~~EIIvVDdgS~--d~~~~~~l~~~~~~~~~~i~vi~~~---   90 (328)
T d1xhba2          22 PTTSVVIVFHNEA---WSTLLRTVHSVINR---SPRHMIEEIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRME---   90 (328)
T ss_dssp             CCEEEEEEESSCC---HHHHHHHHHHHHHS---SCGGGEEEEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECS---
T ss_pred             CCEEEEEeccCCc---HHHHHHHHHHHHhc---CCCCCCeEEEEEECCCC--hhhHHHHHHHHHHhcCCCeEEEEec---
Confidence            4456677775322   23444444433210   00012235666654444  34455555555566655 3333222   


Q ss_pred             cchhHHHHHHHHHHHhcCCceEEEEecCceeeeHHHHHHHHhhcCCC-CceeEEEee--c---------cceeccC----
Q 021108          127 LELSAKTKTYFATAVSMWDAEFYIKVDDDVHVNLATLGMTLAAHRTK-PRVYVGCMK--S---------GPVLARK----  190 (317)
Q Consensus       127 ~NLt~Ktl~~l~w~~~~~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~-~~ly~G~~~--~---------~pv~r~~----  190 (317)
                      .|..  .-.+.....+....+|++.+|+|+.+.++.|...+...... ..+..|.+.  .         .+..+..    
T Consensus        91 ~n~G--~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~  168 (328)
T d1xhba2          91 QRSG--LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWK  168 (328)
T ss_dssp             SCCC--HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTT
T ss_pred             cccc--chHHHHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCcccccccccc
Confidence            2221  12244555555678999999999999988777666544222 222323221  0         0100100    


Q ss_pred             -CCccc-ccccc---cccC-CCCccCcCcCCCeeeecHHHHHHHHHhccccCCCCCChHHHHHHHhhCCCe
Q 021108          191 -GVKYY-EPEYW---KFGE-IGNKYFRHATGQLYALSKDLATYISINQHLLHKYANEDVSLGSWFIGLDVE  255 (317)
Q Consensus       191 -~~K~y-vp~~~---~~~~-~~~~yP~Y~~G~gYvlS~~l~~~l~~~~~~~~~~~~EDv~vG~~l~~l~v~  255 (317)
                       ...|. .+...   .... .....-+++.|+++++++++...+----..+..+..||+-+++-+...|-.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~  239 (328)
T d1xhba2         169 LNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGT  239 (328)
T ss_dssp             CCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCE
T ss_pred             ccccccccchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCe
Confidence             00111 11100   0000 111223567899999999999987543334444457999998877766643