Citrus Sinensis ID: 021113

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
Protein Sequence
MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPNDFI
Secondary Structure (PSIPRED)
cEEEEEEEccccccccHHHHHHccccccccccccccccEEEcccEEEEEEcccccccccccHHHHHHccccccEEEEEEcccccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEEEccccccccccEEEEccccHHHHccHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccccEEEEEccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHHcccEEEcccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEccccccHHHHHHHHHHccccccccccccccccccccEEEEEEccEEEEcccHHHHHHHHccccccEEEEEEcccccccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccEEEEEEcccHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccHHHHHHccccEEEEEccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHcccEEEcccccc
Coil and Loop (DISEMBL)
MVILIVATtidpasinpanallampgwkpgpffqddmKSFVNQEVRVLQHnksiieeddLDKRWQEATGEVVGEVIFLSKhtavsnrpaltvhpigvphlregeplpqggrpgwaappnprigpWLRLLKKIALShnlvpefeitlegthhgpvtskptmfleigsteEYWKRQDAAQVIALLIWDglglgggdavgnwnresdknkvllgiggghyaprhmdivLKDDVWVAHLLsgyslpmedpsqskvdseskeiGGTWKEAIKAAYEATrsafpggeilahldhksfkgWQKNAITGflseqnikvgkpndfi
Flexible Loop (DISEMBL)
MVILIVATtidpasinPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHnksiieeddldKRWQEATGEVVGEVIFLSkhtavsnrpaltVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEItlegthhgpvtsKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGyslpmedpsqskvdsesKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITgflseqnikvgkpndfi
Low Complexity Region (SEG)
MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVialliwdglglgggdavgnwnRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPNDFI
Disordered region (IsUnstruct)
*VILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPH********************PRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS*******************GTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSE************
Disordered Region (DISOPRED)
MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPNDFI
Disordered Region (DISEMBL)
MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPM***************GGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPNDFI
Disordered Region (DISPRO)
MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKP**F*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPNDFI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	317	2.2.26 [Sep-21-2011]
Q9ZPQ3	317	D-aminoacyl-tRNA deacylas	yes	no	0.996	0.996	0.753	1e-142
O29630	278	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.671	0.766	0.305	3e-23
P58852	270	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.731	0.859	0.304	2e-21
O57774	274	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.700	0.810	0.322	4e-21
Q12UQ4	479	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.835	0.553	0.290	8e-21
Q8PS92	297	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.848	0.905	0.292	2e-19
A6VFS5	254	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.460	0.574	0.367	3e-19
Q9V2R8	272	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.687	0.801	0.307	3e-19
Q57630	255	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.586	0.729	0.320	3e-19
Q6LYK1	254	D-tyrosyl-tRNA(Tyr) deacy	yes	no	0.460	0.574	0.355	6e-19

>sp|Q9ZPQ3|GEK1_ARATH D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana GN=GEK1 PE=1 SV=2

 Score =  503 bits (1295), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 238/316 (75%), Positives = 274/316 (86%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV LIVATT DPASINPA ALLAMPGW  GP    D+KSF N++ RV+QH++SI++EDDL
Sbjct: 1   MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D RW+EATGEVV EVIFLS+HTAVSNRPALTVHPIGV HL++GE  PQGG+PGWAA P+ 
Sbjct: 61  DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPST 120

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           RIGPW RLLKK+A +H LVPEFEITLE THHGP+T+KPTMFLEIGSTEEYWKRQDAAQV+
Sbjct: 121 RIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRQDAAQVM 180

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           ALL+W+GLGLGG + VG W  E+ K KVLLGIGGGHYAPRHMDI LKDD+WV HLLSGYS
Sbjct: 181 ALLMWEGLGLGGSEEVGKWKSETGKRKVLLGIGGGHYAPRHMDIALKDDIWVGHLLSGYS 240

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
           LPMEDP+Q+K       IGG W+++IKAA+EAT+++FPGGEILAHLDHKSFKGWQK AIT
Sbjct: 241 LPMEDPTQTKTTPGENYIGGNWRQSIKAAFEATKASFPGGEILAHLDHKSFKGWQKKAIT 300

Query: 301 GFLSEQNIKVGKPNDF 316
            FL+E++I VGKPNDF
Sbjct: 301 EFLAEESINVGKPNDF 316

Hydrolyzes D-aminoacyl-tRNA into D-amino acid and free tRNA. Broad specificity toward the amino acid, but strict specificity toward the D-isomer. Seems to be required for ethanol tolerance.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: -EC: .EC: -

>sp|O29630|DTDA_ARCFU D-tyrosyl-tRNA(Tyr) deacylase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=dtdA PE=1 SV=1

 Score =  109 bits (272), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 115/242 (47%), Gaps = 29/242 (11%)

Query: 4   LIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKR 63
           L+V +  D A  N  + LL    ++       + K +++ E  + +  + +I  D +D++
Sbjct: 3   LVVCSESDTAGQNIKDNLLTFADFEEKDV--GEFKLYLSDEFYIAETKERLIYADHIDEK 60

Query: 64  WQEATGEVVGEVIFLSKHTAVSNRPALTVH---PIGVPHLREGEPLPQGGRPGWAAPPNP 120
             +       E++F S+H++   R   TVH    +G            GG+P   A P+P
Sbjct: 61  LAKYID--FEEILFASRHSSKDGRKIFTVHVSGNVGTADF--------GGKPYSLAKPSP 110

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKPTMFLEIGSTEEYWKRQDAAQV 179
           +      L  +  L     PEFE T+E THHGP   SKP+ F EIGSTEE WK ++AA+V
Sbjct: 111 QTMKNYVLALRERLDRK--PEFEFTMEVTHHGPSEISKPSAFYEIGSTEEEWKDREAAEV 168

Query: 180 IALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGY 239
           +A  + D +     D    WN       V +G+GG HYAPR  +I+L       H  + Y
Sbjct: 169 VAEAMLDAIRAEKMD----WN-------VAVGVGGTHYAPRQTEIMLTTTFTFGHNFAKY 217

Query: 240 SL 241
           + 
Sbjct: 218 TF 219

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr).

Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|P58852|DTDA_PYRFU D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=dtdA PE=3 SV=1

 Score =  103 bits (257), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 24/256 (9%)

Query: 4   LIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKR 63
           +I+ T ID AS+N    L+   G+       D  + +  +++ +L  N+ +I  D LDK 
Sbjct: 3   VIMTTKIDKASMNIREKLIENFGFTESNLTFDGNRVYEKEDILILTTNEEMIYYDYLDKE 62

Query: 64  WQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWA-APPNPRI 122
            ++ T      ++F S+H++    P+LT H  G      G+ +  G    +A A P+   
Sbjct: 63  IEKQTKIKPEVIVFASRHSSAKKLPSLTTHVTG----NWGKAMYGGKDESFAIAFPS--- 115

Query: 123 GPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIA 181
              L LLK   L+      + +  E THHGP   + P++F+EIGS+EE W    A ++IA
Sbjct: 116 AMKLALLKMHELND---LGWTVCYEATHHGPSELEVPSLFIEIGSSEEEWVNDRAGEIIA 172

Query: 182 LLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSL 241
             I   L            ++ +K KV LGIGGGHYAP+   + L+ D+  +H+L  Y+ 
Sbjct: 173 ETIMYVL------------KKREKFKVALGIGGGHYAPKQTKVALESDLAFSHILPKYAQ 220

Query: 242 PMEDPSQSKVDSESKE 257
           P++     +  S S E
Sbjct: 221 PVKKEVILRALSRSTE 236

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr).

Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (taxid: 186497)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|O57774|DTDA_PYRHO D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=dtdA PE=1 SV=1

 Score =  102 bits (253), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 20/242 (8%)

Query: 4   LIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKR 63
           +I+ T +D AS+N  N L+   G+K   +  D    +   +V +L  N  +I  D LD+ 
Sbjct: 3   VIMTTKVDKASMNIMNKLIENFGFKETEYVFDGNPVYKRGDVLILTTNDEMIYYDYLDRE 62

Query: 64  WQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWA-APPNPRI 122
            +   G     + F S+H++    PALT H  G      G+ +  G    +A A P+   
Sbjct: 63  IENQLGFKPEIIAFASRHSSKQKLPALTTHVTG----NWGKAMYGGKDESFAVAIPSAM- 117

Query: 123 GPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIA 181
              L LLK   L+      + +  E THHGP   + P+ F+EIGS+EE W    A ++IA
Sbjct: 118 --KLSLLKMSELND---LGWTVCYEATHHGPTELEVPSFFIEIGSSEEEWINDRAGEIIA 172

Query: 182 LLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSL 241
             I   L         N+ +   K KV LGIGGGHYAP+     L+ D+   H+L  Y+ 
Sbjct: 173 ETIIYVL--------DNYEKGRSKFKVALGIGGGHYAPKQTKRALEGDLAFGHILPKYAQ 224

Query: 242 PM 243
           P+
Sbjct: 225 PV 226

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr).

Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (taxid: 70601)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q12UQ4|DTDA_METBU D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcoides burtonii (strain DSM 6242) GN=dtdA PE=3 SV=1

 Score =  101 bits (251), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 142/324 (43%), Gaps = 59/324 (18%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWK----PGPFFQDDMKSFVNQEVRVLQHNKSIIE 56
           M I+IV + +DPAS N    LL +  W     PG  F D    + +    +++  +  I 
Sbjct: 12  MSIVIVCSVVDPASQNIKEHLLKLRDWVEMSVPGGIFDDLSAVYQSGNFYIIEVTEHHIY 71

Query: 57  EDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPG--- 113
           +D +D++ +EA G     +IF SKH +   R  LT H  G P          GG PG   
Sbjct: 72  QDGIDRKIEEA-GLDCDLLIFASKHKSADGRRLLTAHFTGNPG-----SADFGGYPGELS 125

Query: 114 WAAPPNPRIGPWLRLLKKIA-LSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYW 171
            AAP   R      LL+ +A LS ++   F++++E THHGP     P+++ EIGS+E  W
Sbjct: 126 MAAPFALRC-----LLRNMAELSESI--GFDVSMESTHHGPSDLDVPSVYAEIGSSEVEW 178

Query: 172 KRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVW 231
             QDA  ++A  I               +  S    V +G GGGHYA R  ++VL  D+ 
Sbjct: 179 VDQDAGDIVARSIL--------------SVRSGFCPVGIGFGGGHYAARQSELVLGSDIS 224

Query: 232 VAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSF 291
             H    Y L   D     VD         +++A++ +          G  L + D K+ 
Sbjct: 225 FGHNFPNYQLQFVD-----VD--------MFRKAVERS----------GADLVYCDRKAM 261

Query: 292 KGWQKNAITGFLSEQNIKVGKPND 315
              +K  I     E  + V + +D
Sbjct: 262 SSDEKKRINELADEFGLDVLRESD 285

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr).

Methanococcoides burtonii (strain DSM 6242) (taxid: 259564)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q8PS92|DTDA_METMA D-tyrosyl-tRNA(Tyr) deacylase OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=dtdA PE=3 SV=1

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 145/321 (45%), Gaps = 52/321 (16%)

Query: 3   ILIVATTIDPASINPANALLAMPGWK-----PGPFFQDDMKSFVNQEVRVLQHNKSIIEE 57
           I I+ +  D AS N  N LL +  WK     P   F    +S ++ + R++   +  + +
Sbjct: 14  ITIICSAPDLASQNIKNHLLNLTEWKNLELPPESRFSAARES-IDGKFRLVDIEEIHVFQ 72

Query: 58  DDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAP 117
           D LD++  EA G     +IF SKH +     +LTVH  G P    GE    GG P   A 
Sbjct: 73  DGLDRKL-EAAGLPASLIIFASKHRSKEEINSLTVHCTGNP---SGEA-RLGGHPKELAV 127

Query: 118 PNPR-IGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQD 175
            +P  +   L  +KK+A    L  ++++TLE THHGP   S P+++ EIGSTE+ W+  D
Sbjct: 128 SSPAAMKSILSGMKKLAGEKEL--KYDVTLEVTHHGPTELSVPSIYAEIGSTEKQWEDPD 185

Query: 176 AAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHL 235
           A +V A  I   + L             +K  V +G GGGHYA R   ++L+  +   H 
Sbjct: 186 AGEVAAKSIL-AVSL-------------EKVPVAVGFGGGHYAMRQTGLLLETKISFGHN 231

Query: 236 LSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQ 295
              Y L   D +                  ++ A E + + F      A+ D KS K   
Sbjct: 232 FPKYQLEFVDEA-----------------LVRQAVEKSGAEF------AYFDRKSMKSED 268

Query: 296 KNAITGFLSEQNIKVGKPNDF 316
           +  I+  L +  ++V K ++ 
Sbjct: 269 RKKISEILEKLGLRVLKESEI 289

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr).

Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (taxid: 192952)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|A6VFS5|DTDA_METM7 D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=dtdA PE=3 SV=1

 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 20/166 (12%)

Query: 76  IFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALS 135
           IFLSKH + S +P LTVH  G  +L E      GG P   +P NP     +  L+ I   
Sbjct: 50  IFLSKHASESKKPTLTVHTPG--NLTEDNS--HGGNPEEISPCNPVFNTLM--LQNIN-K 102

Query: 136 HNLVPE-----FEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDGLG 189
           +N + E     FE++ E  HHGP   K P+ F+EIGS+EE W+  DAA++I   + D L 
Sbjct: 103 YNEMEEYKELGFEVSFEVLHHGPTDLKTPSAFVEIGSSEEQWQIDDAAEIITNSLIDTLN 162

Query: 190 LGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHL 235
                     N E ++ + ++GIGGGHY+P+   + L+++ +V +L
Sbjct: 163 -------SIQNSEYEEKEKIIGIGGGHYSPKFTKLALREEYYVGYL 201

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr).

Methanococcus maripaludis (strain C7 / ATCC BAA-1331) (taxid: 426368)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q9V2R8|DTDA_PYRAB D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=dtdA PE=1 SV=1

 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 26/244 (10%)

Query: 4   LIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKR 63
           +I+ T +D AS+N    L+   G+K      D    +   ++ +L  N  +I  D LD+ 
Sbjct: 3   VIMTTKVDKASMNIMQKLIENFGFKETELKFDGNPVYKKDDMVILTTNDEMIYYDYLDRE 62

Query: 64  WQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWA-APPNPRI 122
            ++        + F S+H++    PALT H  G      GE +  G    +A A P+   
Sbjct: 63  IEKQLSFKPEIIAFASRHSSKQKLPALTTHVTG----NWGEAMYGGKDESFAIAIPSA-- 116

Query: 123 GPWLRLLKKIALSHNLVPEF--EITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQV 179
                 +K   L  N + +    +  E THHGP   + P+ F+EIGS+EE W    A ++
Sbjct: 117 ------MKLALLKMNELNDLGWTVCYEATHHGPSELEVPSFFIEIGSSEEEWVNDRAGEI 170

Query: 180 IALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGY 239
           IA  I   L           N E+ K KV LGIGGGHYAP+     L  D+   H+L  Y
Sbjct: 171 IAETIVYVLD----------NYENSKFKVALGIGGGHYAPKQTKRALNSDLAFGHILPKY 220

Query: 240 SLPM 243
           + P+
Sbjct: 221 AQPV 224

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). By recycling D-tyrosyl-tRNA(Tyr) into free tRNA molecules, D-tyrosyl-tRNA(Tyr) deacylase counterreacts against the toxicity associated with the formation of D-tyrosyl-tRNA(Tyr) in vivo.

Pyrococcus abyssi (strain GE5 / Orsay) (taxid: 272844)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q57630|DTDA_METJA D-tyrosyl-tRNA(Tyr) deacylase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=dtdA PE=3 SV=1

 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 23/209 (11%)

Query: 47  VLQHNKSIIEEDDLDKRWQEATGE---VVGEVIFLSKHTAVSNRPALTVHPIGVPHLREG 103
           +  H K   +  + DK     T E        IFLSKH +++N+P+LTVH  G  +L E 
Sbjct: 17  IANHIKEYFDVFETDKELLSLTAEDLEYADYYIFLSKHKSIANKPSLTVHTPG--NLTED 74

Query: 104 EPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNL------VPEFEITLEGTHHGPVTSK 157
                GG P    P +  +   L  LK I  ++        + EF+++ E  HH P   K
Sbjct: 75  NTF--GGNPKEVCPCDAVLNTLL--LKNIYKNYKTYYEDGKIGEFDVSFEVVHHSPTGLK 130

Query: 158 -PTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGH 216
            PT+F+EIGS+E+ W  ++A ++IA  + + +     DA+ + N   DK    +G GGGH
Sbjct: 131 APTVFVEIGSSEKEWILKEAGEIIAKSVLETI-----DAMKSKNY--DKKVRAIGFGGGH 183

Query: 217 YAPRHMDIVLKDDVWVAHLLSGYSLPMED 245
           YAP+   + L+D  +  +L+  Y+   ED
Sbjct: 184 YAPKFTKLALEDKYYFGYLVPKYASVSED 212

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr).

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q6LYK1|DTDA_METMP D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus maripaludis (strain S2 / LL) GN=dtdA PE=3 SV=1

 Score = 95.1 bits (235), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 20/166 (12%)

Query: 76  IFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALS 135
           IFLSKH + S +P LTVH  G  +L +      GG P   +P NP       L+ +    
Sbjct: 50  IFLSKHASESKKPTLTVHTPG--NLTDDNS--HGGNPEEISPCNPVFN---TLMLQNMNK 102

Query: 136 HNLVPE-----FEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDGLG 189
           +N + E     F+++ E  HHGP   K P+ F+EIGS+EE W+  DAA++I   + D L 
Sbjct: 103 YNEMEEYKELGFDVSFEVLHHGPTDLKAPSAFVEIGSSEEQWQIDDAAEIITNSLIDTLN 162

Query: 190 LGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHL 235
                     N E D+ + ++GIGGGHY+P+   + L+++ +V +L
Sbjct: 163 -------SIQNSEYDEKEKIIGIGGGHYSPKFTKLALREEYYVGYL 201

Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr).

Methanococcus maripaludis (strain S2 / LL) (taxid: 267377)

EC: 3

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
388507982	396	unknown [Lotus japonicus]	0.993	0.795	0.810	1e-149
358248376	316	uncharacterized protein LOC100808796 [Gl	0.993	0.996	0.797	1e-148
449452823	321	PREDICTED: D-aminoacyl-tRNA deacylase-li	0.993	0.981	0.794	1e-145
357516879	317	D-aminoacyl-tRNA deacylase [Medicago tru	0.984	0.984	0.781	1e-143
4406770	361	unknown protein [Arabidopsis thaliana]	0.996	0.875	0.753	1e-140
42568915	317	D-aminoacyl-tRNA deacylase [Arabidopsis	0.996	0.996	0.753	1e-140
255541926	292	Ethanol tolerance protein GEKO1, putativ	0.921	1.0	0.819	1e-139
297814690	361	hypothetical protein ARALYDRAFT_322675 [	0.996	0.875	0.772	1e-138
297831572	317	predicted protein [Arabidopsis lyrata su	0.996	0.996	0.772	1e-137
224133036	316	predicted protein [Populus trichocarpa]	0.993	0.996	0.721	1e-133

>gi|388507982|gb|AFK42057.1| unknown [Lotus japonicus]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 256/316 (81%), Positives = 286/316 (90%), Gaps = 1/316 (0%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV L+VAT  D ASINPANALLAMPGW+PGP FQDDMKSFVN+ +RVL H KSI+ EDDL
Sbjct: 81  MVALLVATRSDSASINPANALLAMPGWQPGPDFQDDMKSFVNEGLRVLLHGKSIVVEDDL 140

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           DKRW+E TGEVV EVIF SKHTAVSN+PALTVHPIGVPHLREG+  PQGG+PGWAA PNP
Sbjct: 141 DKRWEEVTGEVVDEVIFFSKHTAVSNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 200

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           R+GPWLRLLKKIA + NLVPEFEITLE THHGPVT+KPTMFLEIGST++YWKR DAA+V+
Sbjct: 201 RMGPWLRLLKKIAEARNLVPEFEITLEATHHGPVTNKPTMFLEIGSTDDYWKRLDAAEVM 260

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           A L+W+GLGLGGG  +GNW RE+DK KVLLGIGGGHYAPRHMD+VLKDDVWV HLLSGYS
Sbjct: 261 AQLVWEGLGLGGGTDIGNWGRENDKKKVLLGIGGGHYAPRHMDVVLKDDVWVGHLLSGYS 320

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
           LPMEDP+ SK +  + EIGGTWKE+IKAAYEA++SAFPGGEILAHLDHKSFKGWQKNAIT
Sbjct: 321 LPMEDPNNSKGERNT-EIGGTWKESIKAAYEASKSAFPGGEILAHLDHKSFKGWQKNAIT 379

Query: 301 GFLSEQNIKVGKPNDF 316
           GFL+EQNIK+GKPN+F
Sbjct: 380 GFLTEQNIKIGKPNNF 395

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248376|ref|NP_001240127.1| uncharacterized protein LOC100808796 [Glycine max] gi|255646410|gb|ACU23684.1| unknown [Glycine max]

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/316 (79%), Positives = 286/316 (90%), Gaps = 1/316 (0%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV L+VATT DPASINPANALL MPGWKPGP FQDDMKS+VN+ VRVL H KSI+ ED+L
Sbjct: 1   MVALLVATTSDPASINPANALLGMPGWKPGPHFQDDMKSYVNEGVRVLVHGKSIVAEDEL 60

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           DKRW+E TGEV+ EVIF SKHTA SN+PALTVHPIGVPHLR+G+  PQGGRPGWAA PNP
Sbjct: 61  DKRWEEVTGEVIDEVIFFSKHTAASNKPALTVHPIGVPHLRQGDVPPQGGRPGWAALPNP 120

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           R+GPWLRLLK +A +HNLVPEFEITLE THHGP+T+KPTMFLEIGSTE+YWKRQDAAQV+
Sbjct: 121 RMGPWLRLLKNLAQAHNLVPEFEITLEATHHGPLTNKPTMFLEIGSTEDYWKRQDAAQVM 180

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           A L+W+GLGLGG   VGNW+RE+D  K+LLGIGGGHYAPRH+D+VLKD+VWV HLLSGYS
Sbjct: 181 AQLVWEGLGLGGVSDVGNWSRENDNKKILLGIGGGHYAPRHVDVVLKDNVWVGHLLSGYS 240

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
           LPMEDP+QSK   ++ EIGGTW+++IKAAYEAT SAFPGGEILAHLDHKSFKGWQKNAIT
Sbjct: 241 LPMEDPNQSK-GEKNVEIGGTWRQSIKAAYEATYSAFPGGEILAHLDHKSFKGWQKNAIT 299

Query: 301 GFLSEQNIKVGKPNDF 316
           GFL+EQNIK+GKPN+F
Sbjct: 300 GFLAEQNIKIGKPNNF 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452823|ref|XP_004144158.1| PREDICTED: D-aminoacyl-tRNA deacylase-like [Cucumis sativus] gi|449523670|ref|XP_004168846.1| PREDICTED: D-aminoacyl-tRNA deacylase-like [Cucumis sativus]

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 255/321 (79%), Positives = 286/321 (89%), Gaps = 6/321 (1%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV L+VATT DPASINPAN LLAMPGW PGP  Q+ MKSF N+ VR+LQH++SI+ EDDL
Sbjct: 1   MVTLVVATTFDPASINPANELLAMPGWSPGPPLQE-MKSFANRNVRLLQHDRSIVVEDDL 59

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D RW+E TGEVV EVIF S+HTAVSNRPALTVHPIGVPHLR+GE  PQGG+PGWAAPP+P
Sbjct: 60  DNRWEELTGEVVDEVIFFSRHTAVSNRPALTVHPIGVPHLRDGEVPPQGGKPGWAAPPSP 119

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           RIGPWLRLLK IA SHNLVPEFEITLEGTHHGPVT+KPT+FLEIGST+EYW+R DAA+VI
Sbjct: 120 RIGPWLRLLKTIAQSHNLVPEFEITLEGTHHGPVTNKPTLFLEIGSTDEYWRRPDAARVI 179

Query: 181 AL----LIWDGLGLGGGDAVGNWNRESDK-NKVLLGIGGGHYAPRHMDIVLKDDVWVAHL 235
           AL    L+W+GL +GGG+ VGNWNRE +K NKVLLGIGGGHYAPRHMDIVLKD VWV+HL
Sbjct: 180 ALVELQLVWEGLAIGGGNDVGNWNREHNKNNKVLLGIGGGHYAPRHMDIVLKDGVWVSHL 239

Query: 236 LSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQ 295
           LSGYSLPMEDP+QS   + +K+IGG+WKEAIKAAYEAT+ AFPGGEI+AHLDHKSFKGWQ
Sbjct: 240 LSGYSLPMEDPNQSNGGTNNKDIGGSWKEAIKAAYEATKLAFPGGEIIAHLDHKSFKGWQ 299

Query: 296 KNAITGFLSEQNIKVGKPNDF 316
           KNAITGFL EQ IK+GKPNDF
Sbjct: 300 KNAITGFLGEQGIKIGKPNDF 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357516879|ref|XP_003628728.1| D-aminoacyl-tRNA deacylase [Medicago truncatula] gi|355522750|gb|AET03204.1| D-aminoacyl-tRNA deacylase [Medicago truncatula]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/320 (78%), Positives = 281/320 (87%), Gaps = 8/320 (2%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV L+VATT DPASINPANALLAMPGW+PGP FQDDMKSFVN+ +RVL H KSI+ ED L
Sbjct: 1   MVSLLVATTSDPASINPANALLAMPGWQPGPHFQDDMKSFVNEGLRVLLHGKSIVVEDYL 60

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D RW+E TGEVV EVIFLSKHTA SN+PALTVHPIGVPHLREG+  PQGG+PGWAA PNP
Sbjct: 61  DTRWEEVTGEVVDEVIFLSKHTAASNKPALTVHPIGVPHLREGDVPPQGGKPGWAALPNP 120

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           RIGPW+RLLK IA +HNLVPEFEITLE THHGP+T+KPTMFLEIGSTE+YWKRQDAAQV+
Sbjct: 121 RIGPWIRLLKNIAQAHNLVPEFEITLEATHHGPMTNKPTMFLEIGSTEDYWKRQDAAQVM 180

Query: 181 A----LLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLL 236
           A     L+W+GLGLGGG  VGNW+RE+DK KVLLGIGGGHY PRHM++VLKD VWV H+L
Sbjct: 181 AQVEWTLVWEGLGLGGGTDVGNWSRENDKKKVLLGIGGGHYVPRHMNVVLKDGVWVGHVL 240

Query: 237 SGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQK 296
           SGYS+PMEDP        + EIGGTWK++IKAAYEAT+SAFPGGEI+AHLD KSFKGWQK
Sbjct: 241 SGYSVPMEDPK----GETNVEIGGTWKQSIKAAYEATKSAFPGGEIIAHLDQKSFKGWQK 296

Query: 297 NAITGFLSEQNIKVGKPNDF 316
           NAITGFL+EQNIK+GKPN+F
Sbjct: 297 NAITGFLTEQNIKIGKPNNF 316

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4406770|gb|AAD20081.1| unknown protein [Arabidopsis thaliana]

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/316 (75%), Positives = 274/316 (86%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV LIVATT DPASINPA ALLAMPGW  GP    D+KSF N++ RV+QH++SI++EDDL
Sbjct: 45  MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 104

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D RW+EATGEVV EVIFLS+HTAVSNRPALTVHPIGV HL++GE  PQGG+PGWAA P+ 
Sbjct: 105 DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPST 164

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           RIGPW RLLKK+A +H LVPEFEITLE THHGP+T+KPTMFLEIGSTEEYWKRQDAAQV+
Sbjct: 165 RIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRQDAAQVM 224

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           ALL+W+GLGLGG + VG W  E+ K KVLLGIGGGHYAPRHMDI LKDD+WV HLLSGYS
Sbjct: 225 ALLMWEGLGLGGSEEVGKWKSETGKRKVLLGIGGGHYAPRHMDIALKDDIWVGHLLSGYS 284

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
           LPMEDP+Q+K       IGG W+++IKAA+EAT+++FPGGEILAHLDHKSFKGWQK AIT
Sbjct: 285 LPMEDPTQTKTTPGENYIGGNWRQSIKAAFEATKASFPGGEILAHLDHKSFKGWQKKAIT 344

Query: 301 GFLSEQNIKVGKPNDF 316
            FL+E++I VGKPNDF
Sbjct: 345 EFLAEESINVGKPNDF 360

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42568915|ref|NP_178474.2| D-aminoacyl-tRNA deacylase [Arabidopsis thaliana] gi|83302950|sp|Q9ZPQ3.2|GEK1_ARATH RecName: Full=D-aminoacyl-tRNA deacylase; AltName: Full=Ethanol tolerance protein GEKO1 gi|28812213|dbj|BAC65101.1| GEKO1 [Arabidopsis thaliana] gi|63025186|gb|AAY27066.1| At2g03800 [Arabidopsis thaliana] gi|110737474|dbj|BAF00680.1| hypothetical protein [Arabidopsis thaliana] gi|330250655|gb|AEC05749.1| D-aminoacyl-tRNA deacylase [Arabidopsis thaliana]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/316 (75%), Positives = 274/316 (86%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV LIVATT DPASINPA ALLAMPGW  GP    D+KSF N++ RV+QH++SI++EDDL
Sbjct: 1   MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D RW+EATGEVV EVIFLS+HTAVSNRPALTVHPIGV HL++GE  PQGG+PGWAA P+ 
Sbjct: 61  DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPST 120

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           RIGPW RLLKK+A +H LVPEFEITLE THHGP+T+KPTMFLEIGSTEEYWKRQDAAQV+
Sbjct: 121 RIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRQDAAQVM 180

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           ALL+W+GLGLGG + VG W  E+ K KVLLGIGGGHYAPRHMDI LKDD+WV HLLSGYS
Sbjct: 181 ALLMWEGLGLGGSEEVGKWKSETGKRKVLLGIGGGHYAPRHMDIALKDDIWVGHLLSGYS 240

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
           LPMEDP+Q+K       IGG W+++IKAA+EAT+++FPGGEILAHLDHKSFKGWQK AIT
Sbjct: 241 LPMEDPTQTKTTPGENYIGGNWRQSIKAAFEATKASFPGGEILAHLDHKSFKGWQKKAIT 300

Query: 301 GFLSEQNIKVGKPNDF 316
            FL+E++I VGKPNDF
Sbjct: 301 EFLAEESINVGKPNDF 316

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541926|ref|XP_002512027.1| Ethanol tolerance protein GEKO1, putative [Ricinus communis] gi|223549207|gb|EEF50696.1| Ethanol tolerance protein GEKO1, putative [Ricinus communis]

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 240/293 (81%), Positives = 270/293 (92%), Gaps = 1/293 (0%)

Query: 24  MPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHTA 83
           MPGW+P P FQ+ MKS+ N+EVR+LQH+KSII+ED+LD+RW+EATGEVV EVIF SKHTA
Sbjct: 1   MPGWQPVPSFQE-MKSYSNKEVRLLQHDKSIIKEDNLDERWEEATGEVVEEVIFFSKHTA 59

Query: 84  VSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIGPWLRLLKKIALSHNLVPEFE 143
           VSNRPALT+HPIGVPHLR+G+  PQGG+PGWAAPP+PR+GPWLRLLKKIA SH+L+PEFE
Sbjct: 60  VSNRPALTIHPIGVPHLRQGDVPPQGGKPGWAAPPDPRMGPWLRLLKKIADSHHLLPEFE 119

Query: 144 ITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRES 203
           ITLE THHGPVT+KPTMF+EIGSTEEYWKRQDAAQVIALL+W+GLGLGGG +VGNW+   
Sbjct: 120 ITLEATHHGPVTNKPTMFIEIGSTEEYWKRQDAAQVIALLVWEGLGLGGGPSVGNWSSAH 179

Query: 204 DKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWK 263
           DK  VLLGIGGGHYAPRHMDIVLKD VWVAHLLSGYSLPMEDPSQ+K DS +K+IGGTW+
Sbjct: 180 DKRTVLLGIGGGHYAPRHMDIVLKDGVWVAHLLSGYSLPMEDPSQTKKDSSTKDIGGTWR 239

Query: 264 EAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPNDF 316
           EAIKA YEAT+SAFPGGEILAHLDHKSFK WQKNAI GFL EQNIK+GKPNDF
Sbjct: 240 EAIKAVYEATQSAFPGGEILAHLDHKSFKNWQKNAIIGFLGEQNIKIGKPNDF 292

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814690|ref|XP_002875228.1| hypothetical protein ARALYDRAFT_322675 [Arabidopsis lyrata subsp. lyrata] gi|297321066|gb|EFH51487.1| hypothetical protein ARALYDRAFT_322675 [Arabidopsis lyrata subsp. lyrata]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/316 (77%), Positives = 278/316 (87%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV LIVATT DPASINPA ALLAMPGW  GP    D+KSF N++ RV+QH++SI++EDDL
Sbjct: 45  MVTLIVATTSDPASINPAAALLAMPGWIAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 104

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D RW+EATGEV+ EVIFLS+HTAVSNRPALTVHPIGV HL++GE  PQGG+PGWAA PNP
Sbjct: 105 DLRWEEATGEVIDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPNP 164

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           RIGPW RLLKK+A +H LVPEFEITLE THHGP+T+KPTMFLEIGSTEEYWKR DAAQV+
Sbjct: 165 RIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRDDAAQVM 224

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           ALL+W+GLGLGGG+AVGNWN E+ K KVLLGIGGGHYAPRHMDIVLKDD+WV HLLSGYS
Sbjct: 225 ALLMWEGLGLGGGEAVGNWNSETGKRKVLLGIGGGHYAPRHMDIVLKDDIWVGHLLSGYS 284

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
           LPMEDP+Q+K       IGG W+++IKAA+EAT++AFPGGEILAHLDHKSFKGWQK AIT
Sbjct: 285 LPMEDPTQTKTTPVENYIGGNWRQSIKAAFEATKAAFPGGEILAHLDHKSFKGWQKKAIT 344

Query: 301 GFLSEQNIKVGKPNDF 316
            FL E++I VGKPNDF
Sbjct: 345 EFLGEESINVGKPNDF 360

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831572|ref|XP_002883668.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297329508|gb|EFH59927.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/316 (77%), Positives = 279/316 (88%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MV LIVATT DPASINPA ALLAMPGW  GP    D+KSF N++ RV+QH++SI++EDDL
Sbjct: 1   MVTLIVATTSDPASINPAAALLAMPGWIAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D RW+EATGEV+ EVIFLS+HTAVSNRPALTVHPIGV HL++GE  PQGG+PGWAA PNP
Sbjct: 61  DLRWEEATGEVIDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPNP 120

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           RIGPW RLLKK+A +H LVPEFEITLE THHGP+T+KPTMFLEIGSTEEYWKR DAAQV+
Sbjct: 121 RIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRDDAAQVM 180

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           ALL+W+GLGLGGG+AVGNWN E+ K KVLLGIGGGHYAPRHMDIVLKDD+WV HLLSGYS
Sbjct: 181 ALLMWEGLGLGGGEAVGNWNSETGKRKVLLGIGGGHYAPRHMDIVLKDDIWVGHLLSGYS 240

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
           LPMEDP+Q+K       IGG W+++IKAA+EAT++AFPGGEILAHLDHKSFKGWQK AIT
Sbjct: 241 LPMEDPTQTKTTPVENYIGGNWRQSIKAAFEATKAAFPGGEILAHLDHKSFKGWQKKAIT 300

Query: 301 GFLSEQNIKVGKPNDF 316
            FL+E++I VGKPNDF
Sbjct: 301 EFLAEESINVGKPNDF 316

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133036|ref|XP_002321466.1| predicted protein [Populus trichocarpa] gi|222868462|gb|EEF05593.1| predicted protein [Populus trichocarpa]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 228/316 (72%), Positives = 266/316 (84%), Gaps = 1/316 (0%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           MVIL+VATT DPASI PA+ALLAMPGW  GP  QD + SFVN+EVR+++ + S+++ED L
Sbjct: 1   MVILLVATTSDPASIGPASALLAMPGWHAGPSLQDAV-SFVNKEVRLIKVDNSLVKEDHL 59

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           DKRW+EATGE+V E+IFLSKH A S+RPALTVHPIG PH+ EGE L  GG+PGWAAPPNP
Sbjct: 60  DKRWEEATGELVDEIIFLSKHAASSSRPALTVHPIGTPHISEGEVLVAGGKPGWAAPPNP 119

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVI 180
           RIGPWLRLL+ IA S  L PEFE+TLE THHGP+T+ PTMF+EIGSTEEYW+RQDAAQ I
Sbjct: 120 RIGPWLRLLRTIAESQKLTPEFEVTLEATHHGPLTNSPTMFVEIGSTEEYWRRQDAAQAI 179

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           ALL+W+GLGLGGG A G+W R    NK+LLGIGGGHY PRHMDIVLKD VWV HLLSGYS
Sbjct: 180 ALLVWEGLGLGGGIAEGDWGRNGGSNKILLGIGGGHYVPRHMDIVLKDGVWVGHLLSGYS 239

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
           LPMEDP QSK    ++ + GTW+E+IK A+EAT+SAFPGGEILAHLDHKSFK WQ+ A+T
Sbjct: 240 LPMEDPGQSKTQLNTEAVHGTWRESIKVAFEATKSAFPGGEILAHLDHKSFKSWQRTAVT 299

Query: 301 GFLSEQNIKVGKPNDF 316
            FL EQNIK+GK +DF
Sbjct: 300 TFLVEQNIKIGKASDF 315

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
TAIR|locus:2044279	317	GEK1 "GEKO1" [Arabidopsis thal	0.996	0.996	0.712	2.1e-123

TAIR|locus:2044279 GEK1 "GEKO1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 225/316 (71%), Positives = 257/316 (81%)

Query:     1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
             MV LIVATT DPASINPA ALLAMPGW  GP    D+KSF N++ RV+QH++SI++EDDL
Sbjct:     1 MVTLIVATTADPASINPAAALLAMPGWTAGPILPPDIKSFSNKQTRVIQHDRSIVKEDDL 60

Query:    61 DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
             D RW+EATGEVV EVIFLS+HTAVSNRPALTVHPIGV HL++GE  PQGG+PGWAA P+ 
Sbjct:    61 DLRWEEATGEVVDEVIFLSRHTAVSNRPALTVHPIGVLHLKDGESPPQGGKPGWAALPST 120

Query:   121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVX 180
             RIGPW RLLKK+A +H LVPEFEITLE THHGP+T+KPTMFLEIGSTEEYWKRQDAAQV 
Sbjct:   121 RIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRQDAAQVM 180

Query:   181 XXXXXXXXXXXXXXXXXXXXRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
                                  E+ K KVLLGIGGGHYAPRHMDI LKDD+WV HLLSGYS
Sbjct:   181 ALLMWEGLGLGGSEEVGKWKSETGKRKVLLGIGGGHYAPRHMDIALKDDIWVGHLLSGYS 240

Query:   241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
             LPMEDP+Q+K       IGG W+++IKAA+EAT+++FPGGEILAHLDHKSFKGWQK AIT
Sbjct:   241 LPMEDPTQTKTTPGENYIGGNWRQSIKAAFEATKASFPGGEILAHLDHKSFKGWQKKAIT 300

Query:   301 GFLSEQNIKVGKPNDF 316
              FL+E++I VGKPNDF
Sbjct:   301 EFLAEESINVGKPNDF 316


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      317       296   0.00093  115 3  11 22  0.43    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  224 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.60u 0.22s 24.82t   Elapsed:  00:00:01
  Total cpu time:  24.60u 0.22s 24.82t   Elapsed:  00:00:01
  Start:  Sat May 11 02:03:24 2013   End:  Sat May 11 02:03:25 2013

GO:0009507 "chloroplast" evidence=ISM

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IGI

GO:0051499 "D-aminoacyl-tRNA deacylase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZPQ3	GEK1_ARATH	3, ., 1, ., -, ., -	0.7531	0.9968	0.9968	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	317
pfam04414	214	pfam04414, tRNA_deacylase, D-aminoacyl-tRNA deacyl	1e-75
PRK03995	267	PRK03995, PRK03995, hypothetical protein; Provisio	8e-52
COG1650	266	COG1650, COG1650, Uncharacterized protein conserve	2e-34
PRK14866	451	PRK14866, PRK14866, hypothetical protein; Provisio	4e-32

>gnl|CDD|218075 pfam04414, tRNA_deacylase, D-aminoacyl-tRNA deacylase

 Score =  230 bits (588), Expect = 1e-75
 Identities = 94/261 (36%), Positives = 126/261 (48%), Gaps = 49/261 (18%)

Query: 55  IEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGW 114
           I ED LD       GE    +IFLS+H++ S RPALTVH  G            GG PG 
Sbjct: 1   IYEDGLDF-----LGEDGDLIIFLSRHSSESGRPALTVHTTGNFG-----EAELGGEPGE 50

Query: 115 AAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWK 172
            A  NPR+    LR L K+A        FE+T E THHGP T   P++F+EIGSTEE W 
Sbjct: 51  LAIANPRLMTALLRALAKLAPELG----FEVTFEATHHGPTTLDVPSVFVEIGSTEEEWN 106

Query: 173 RQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWV 232
             DAA+ +A  + + LG            E ++ +  +GIGGGHYAPR   I L+ ++ V
Sbjct: 107 DPDAAEALAEAVLEALG----------KDEEEECRPAVGIGGGHYAPRFTKIALETEIAV 156

Query: 233 AHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFK 292
            H++  Y+L                      E I+ A E + +        A +D KS K
Sbjct: 157 GHIIPKYALDELSD-----------------EVIRQAIEKSGADA------AIIDRKSLK 193

Query: 293 GWQKNAITGFLSEQNIKVGKP 313
           G  ++ IT FL E  ++V K 
Sbjct: 194 GEDRSRITEFLEELGLEVIKE 214

Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Length = 214

>gnl|CDD|235191 PRK03995, PRK03995, hypothetical protein; Provisional

 Score =  171 bits (435), Expect = 8e-52
 Identities = 98/312 (31%), Positives = 144/312 (46%), Gaps = 50/312 (16%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
           M+ LIV +  DPAS N    L+ + G+K      D    +V     + + ++ +I  D L
Sbjct: 1   MMYLIVYSKKDPASQNIKELLIELFGFKETGK-FDANPVYVKGGYVIEEIDEDVIYFDYL 59

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D    E  GE    +IFLS+H++ + +P+LTVH  G P          GG+P   A  NP
Sbjct: 60  D----EKKGE---YIIFLSRHSSKAKKPSLTVHTPGNP-----GEASYGGKPKELAIANP 107

Query: 121 RI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQ 178
           R+    LR LKK          FE+T E THHGP     P++F+EIGSTEE WK + A +
Sbjct: 108 RLMTSLLRNLKK----LAKELGFEVTFEATHHGPTELKVPSVFVEIGSTEEEWKNERAGE 163

Query: 179 VIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSG 238
           ++A  + + L           + E +K K  +GIGGGHYAP+   + L+ +    H++  
Sbjct: 164 ILAEAVIEVLD----------SIEYEKFKPAIGIGGGHYAPKFTKLALESEYCFGHIIPK 213

Query: 239 YSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNA 298
           Y+L                      E +  A E  +S      I+  +D K  K   +  
Sbjct: 214 YALDHLSE-----------------EVLIQAIE--KSTPEIDRIV--IDWKGVKSEDRER 252

Query: 299 ITGFLSEQNIKV 310
           I  FL E  I+V
Sbjct: 253 IIEFLEELGIEV 264

Length = 267

>gnl|CDD|224564 COG1650, COG1650, Uncharacterized protein conserved in archaea [Function unknown]

 Score =  126 bits (317), Expect = 2e-34
 Identities = 74/241 (30%), Positives = 107/241 (44%), Gaps = 28/241 (11%)

Query: 4   LIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKR 63
           ++V +  DPAS+N A  L     +K           F              I+     K 
Sbjct: 3   VLVLSASDPASMNIAEYLGEDREFKETVVDVLKSGEFYIVATEDTHIYPDYIDAPLSPKG 62

Query: 64  WQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPR-I 122
                      +IF S+H++ + RP+LTVHP G P    G     GG+P   A  NPR +
Sbjct: 63  EY---------IIFASRHSSKAGRPSLTVHPPGNP----GPEADLGGKPKELAVANPRLM 109

Query: 123 GPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIA 181
              LR LK++         FE+T E THHGP     P++F+EIGSTEE W   +A +++A
Sbjct: 110 KAALRELKELYD---EGGLFEVTFEATHHGPTELDVPSLFVEIGSTEEEWTDDEAGEILA 166

Query: 182 LLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSL 241
             + + L     D V     +    K  +G GGGHYAP+   + L+  V   H++  Y  
Sbjct: 167 EALEEAL-----DNV-----DEGDFKAAVGFGGGHYAPKQTKLALESAVDFGHIVPKYDH 216

Query: 242 P 242
            
Sbjct: 217 D 217

Length = 266

>gnl|CDD|237840 PRK14866, PRK14866, hypothetical protein; Provisional

 Score =  123 bits (311), Expect = 4e-32
 Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 57/317 (17%)

Query: 1   MVILIVATTIDPASINPANALLAMPGW---KPGPFFQDDMKSFVNQEVRVLQHNKSIIEE 57
           M+I IV +  DPAS++    LL +  W               + +    + + ++  I  
Sbjct: 1   MMIAIVVSRADPASVHIREHLLELLDWEERSDEGRPDGGGTYYRSDGFELREFDERHIHL 60

Query: 58  DDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAP 117
           D + + + +        +IF S+H++V   P LT H  G        P   GG PG  AP
Sbjct: 61  DGIAEAFFDPD-----LLIFASRHSSVDTGPLLTAHFTGNF-----GPAEYGGEPGSLAP 110

Query: 118 PNPRIGPWLR-LLKKIALSHNLVPE-FEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQ 174
             P     ++ +L+ +A      PE +++++E THHGP     P++F+E+GSTE+ W   
Sbjct: 111 AAPN---AMKAVLEALA---EHAPEGYDVSMECTHHGPTDVGVPSLFVELGSTEKEWDDP 164

Query: 175 DAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAH 234
           DAA+ +A  I   L L G             ++ L+G GGGHYAPR   IVL+ D    H
Sbjct: 165 DAARAVARAI---LDLRGVPP--------HTDRPLVGFGGGHYAPRQTRIVLETDWAFGH 213

Query: 235 LLSGYSLP-MEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKG 293
           + + + L  + DP                   ++AA+EA+ +        A++D K+   
Sbjct: 214 IAADWQLGALGDP-----------------AVLRAAFEASGADA------AYIDRKAMSS 250

Query: 294 WQKNAITGFLSEQNIKV 310
             +  +   L E  ++V
Sbjct: 251 GDRPRLEALLEELGLRV 267

Length = 451

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	317
PRK03995	267	hypothetical protein; Provisional	100.0
PRK14866	451	hypothetical protein; Provisional	100.0
PF04414	213	tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterP	100.0
COG1650	266	Uncharacterized protein conserved in archaea [Func	100.0

>PRK03995 hypothetical protein; Provisional

Probab=100.00  E-value=9.1e-91  Score=652.65  Aligned_cols=264  Identities=36%  Similarity=0.548  Sum_probs=243.1

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEec
Q 021113            1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSK   80 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflSR   80 (317)
                      ||++||+|++||||+||+++|+++++|++.+.. ++.++|+.++|+|+++++++|++|++|++       ++|+|||+||
T Consensus         1 mm~~iv~S~~DpAs~~i~~~L~~~~~~~~~~~~-~~~~~y~~~~~~l~~~~~~~i~~d~~d~~-------~~d~iIflSR   72 (267)
T PRK03995          1 MMYLIVYSKKDPASQNIKELLIELFGFKETGKF-DANPVYVKGGYVIEEIDEDVIYFDYLDEK-------KGEYIIFLSR   72 (267)
T ss_pred             CeEEEEEeCCChhhHHHHHHHHHhcCCcccCcc-CCcceeeeCCEEEEEeccceeeccccccc-------CCCEEEEEec
Confidence            899999999999999999999999999998776 78899999999999999999999999975       7999999999


Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHHHhCCCCCCeeEEEeecccCCC-CCCC
Q 021113           81 HTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKP  158 (317)
Q Consensus        81 H~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~~~P  158 (317)
                      |+|++++|+||||+||||     ++|.|||+|+++|+|+|++ ++||+.|++++    +.++|+||||||||||| +++|
T Consensus        73 H~s~~~~p~LTvH~tGN~-----~~a~~GG~p~~la~a~P~~~~~lL~~l~~~~----~~~~yevt~EaTHHGPt~l~~P  143 (267)
T PRK03995         73 HSSKAKKPSLTVHTPGNP-----GEASYGGKPKELAIANPRLMTSLLRNLKKLA----KELGFEVTFEATHHGPTELKVP  143 (267)
T ss_pred             ccCCCCCceEEEECCCCC-----chhhcCCCCCccccCCHHHHHHHHHHHHHhc----CCCCcEEEEEccccCCCCCCCC
Confidence            999999999999999998     5899999999999999994 68888888876    34589999999999999 8999


Q ss_pred             ceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEeeeCC
Q 021113          159 TMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSG  238 (317)
Q Consensus       159 s~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~~k  238 (317)
                      ++||||||||+||+|++|+++||++|+++|+..          +.++.+++||||||||+||||+++|++++|||||+||
T Consensus       144 s~FvEIGSte~eW~d~~a~~~vA~avl~~l~~~----------~~~~~~~~iGiGGgHYapr~T~~~l~~~~~~GHi~pk  213 (267)
T PRK03995        144 SVFVEIGSTEEEWKNERAGEILAEAVIEVLDSI----------EYEKFKPAIGIGGGHYAPKFTKLALESEYCFGHIIPK  213 (267)
T ss_pred             eEEEEeCCCHHHhCCcHHHHHHHHHHHHHHhcc----------cccCCCEEEEECCCCccHHHHHHHhhCCeeEEeEccc
Confidence            999999999999999999999999999997421          1346789999999999999999999999999999999


Q ss_pred             CccCCCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccC
Q 021113          239 YSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGK  312 (317)
Q Consensus       239 y~l~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k  312 (317)
                      |++++.+                 +++|++|++++...+    ..|+|||||+|+++|++|+++|+++||+|+|
T Consensus       214 y~l~~~~-----------------~~~i~~a~~ks~~~~----~~~~id~K~~k~~~r~~i~~~le~~gi~v~~  266 (267)
T PRK03995        214 YALDHLS-----------------EEVLIQAIEKSTPEI----DRIVIDWKGVKSEDRERIIEFLEELGIEVEK  266 (267)
T ss_pred             cchhcCC-----------------HHHHHHHHHhccCCC----CEEEEecCCCCHHHHHHHHHHHHHCCCeEEe
Confidence            9999642                 468999999986554    3789999999999999999999999999986

>PRK14866 hypothetical protein; Provisional

Probab=100.00  E-value=3.9e-85  Score=649.20  Aligned_cols=266  Identities=30%  Similarity=0.496  Sum_probs=238.6

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCCCCCCCCCc---CCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEE
Q 021113            1 MVILIVATTIDPASINPANALLAMPGWKPGPFF---QDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIF   77 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~---~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIf   77 (317)
                      ||++||+|++||||+||+++|+++++|++.+..   ++++++|++++|+|+++++++||+|+||++|+     ++|+|||
T Consensus         1 m~~~iv~S~~DpAS~ni~~~L~~l~~~~~~~~~~~~~~~~~~y~~~~~~l~~~~~~~i~~D~ld~~~~-----~~d~iIf   75 (451)
T PRK14866          1 MMIAIVVSRADPASVHIREHLLELLDWEERSDEGRPDGGGTYYRSDGFELREFDERHIHLDGIAEAFF-----DPDLLIF   75 (451)
T ss_pred             CeEEEEEeCCCchhhhHHHHHHHhcCCcccCCccccccccceeecCcEEEEEechhheeccchhhccC-----CCCEEEE
Confidence            899999999999999999999999999987531   23469999999999999999999999999984     8999999


Q ss_pred             EecCCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHHHhCCCCCCeeEEEeecccCCC-C
Q 021113           78 LSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-T  155 (317)
Q Consensus        78 lSRH~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~  155 (317)
                      +|||+|++++|+||||+||||     ++|.|||+|+++|+|+|++ +++|+.|++++     .++|+|+||||||||| +
T Consensus        76 ~SRH~s~~~~p~LTvH~tGN~-----~~a~~GG~p~~la~a~P~~~~~lL~~l~~~~-----~~~yevt~EaTHHGPt~l  145 (451)
T PRK14866         76 ASRHSSVDTGPLLTAHFTGNF-----GPAEYGGEPGSLAPAAPNAMKAVLEALAEHA-----PEGYDVSMECTHHGPTDV  145 (451)
T ss_pred             EecccCCCCCceEEEECCCCC-----ChhhcCCCCCccccCCHHHHHHHHHHHHHhC-----cCCcEEEEEccccCCCCC
Confidence            999999999999999999997     5899999999999999996 45556555542     2379999999999999 7


Q ss_pred             CCCceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEee
Q 021113          156 SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHL  235 (317)
Q Consensus       156 ~~Ps~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi  235 (317)
                      ++||+||||||||+||+|++|+++||++|+++++.+           .++.+++||||||||+||||+++|++++|||||
T Consensus       146 ~~Ps~FvEIGSte~eW~d~~a~~~vA~ail~~~~~~-----------~~~~~~~iG~GGgHYapr~t~i~le~~~~~GHi  214 (451)
T PRK14866        146 GVPSLFVELGSTEKEWDDPDAARAVARAILDLRGVP-----------PHTDRPLVGFGGGHYAPRQTRIVLETDWAFGHI  214 (451)
T ss_pred             CCceEEEEeCCCHHHhCCcHHHHHHHHHHHHHhccc-----------ccCCCEEEEeCCCCcchhHHHHhhcCCeeEEee
Confidence            999999999999999999999999999999987532           124689999999999999999999999999999


Q ss_pred             eCCCccCCCCCCCcccccccccccccHHH-HHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCC
Q 021113          236 LSGYSLPMEDPSQSKVDSESKEIGGTWKE-AIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPN  314 (317)
Q Consensus       236 ~~ky~l~~~~~~~~~~~~~~~~~~~~~~~-~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~  314 (317)
                      +|||++++.+                 .+ +|++|+++++      ..+|||||||+|+++|++|+++|+++||+|+|..
T Consensus       215 ~pky~l~~l~-----------------~~~~i~~a~~~~~------~~~a~iD~Ks~k~~~r~~i~~~l~~lgl~vi~e~  271 (451)
T PRK14866        215 AADWQLGALG-----------------DPAVLRAAFEASG------ADAAYIDRKAMSSGDRPRLEALLEELGLRVLSET  271 (451)
T ss_pred             ccccchhccC-----------------cHHHHHHHHHhcC------CCEEEEecCCCCHHHHHHHHHHHHHCCCEEEEee
Confidence            9999999531                 24 8899999874      3579999999999999999999999999999875


Q ss_pred             C
Q 021113          315 D  315 (317)
Q Consensus       315 ~  315 (317)
                      +
T Consensus       272 ~  272 (451)
T PRK14866        272 W  272 (451)
T ss_pred             h
Confidence            3

>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules

Probab=100.00  E-value=6.1e-77  Score=543.17  Aligned_cols=211  Identities=40%  Similarity=0.618  Sum_probs=161.7

Q ss_pred             ccccchhHHHHhhcCCCccEEEEEecCCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHH
Q 021113           55 IEEDDLDKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIA  133 (317)
Q Consensus        55 I~~D~Ld~~~~~~~g~~~d~iIflSRH~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~  133 (317)
                      ||+|+||+.     +.++|+|||+|||+|++|+|+||||+||||     ++|+|||+|+++++|+|++ +++|+.|++++
T Consensus         1 i~~D~~d~~-----~~~~d~iIf~SrH~s~~~~p~LTvH~tGN~-----~~a~~GG~p~~la~a~P~~~~~~l~~l~~~~   70 (213)
T PF04414_consen    1 IYEDNLDEL-----FEDPDLIIFLSRHSSESGRPSLTVHTTGNF-----GEAEYGGKPGELAPANPRLMKALLRALKKHA   70 (213)
T ss_dssp             GG-TTHHHC-----TS--SEEEEEEEEE-TT---EEEEE--EES-----S--TTSS-TTEE-BB-HHHHHHHHHHHHHHG
T ss_pred             Ccccccccc-----cCCCCEEEEEeeccCCCCCceEEEeCCCCC-----CccccCCCCCccccCCHHHHHHHHHHHHHhc
Confidence            789999985     468999999999999999999999999998     4699999999999999996 68888888886


Q ss_pred             HhCCCCCCeeEEEeecccCCC-CCCCceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEe
Q 021113          134 LSHNLVPEFEITLEGTHHGPV-TSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGI  212 (317)
Q Consensus       134 ~~~~~~~~fev~~EATHHGPt-~~~Ps~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~  212 (317)
                      .+     +|+|+||||||||| +++|++||||||||+||+|++|+++||++|+++++.+..         ..+.+++|||
T Consensus        71 ~e-----~y~v~~EaTHHGPt~~~~Ps~FvEIGSte~eW~d~~a~~~vA~avl~~~~~~~~---------~~~~~~~ig~  136 (213)
T PF04414_consen   71 PE-----GYEVSYEATHHGPTDLSVPSVFVEIGSTEEEWNDPDAAEAVARAVLEVLESDEK---------AECCPVAIGF  136 (213)
T ss_dssp             GC-----T-EEEE--S-SS-----SBEEEEEEEESHHHHT-HHHHHHHHHHHHHHHHHTTC---------STT-EEEEEE
T ss_pred             cC-----CCEEEEEeeccCCCCCCCCcEEEEeCCCHHHhCChHHHHHHHHHHHHHhccccc---------ccccceeEEe
Confidence            52     79999999999999 899999999999999999999999999999999865321         1235899999


Q ss_pred             CCCCCccchhhheeecCeeEEeeeCCCccCCCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCc
Q 021113          213 GGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFK  292 (317)
Q Consensus       213 GGgHYapr~t~~~l~~~~~~GHi~~ky~l~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k  292 (317)
                      |||||+||||+++|++++|||||+|||+|+..+                 +++|++|+++++.      ..|||||||+|
T Consensus       137 GG~HYapr~t~~~l~~~~~~GHi~~ky~l~~l~-----------------~~~l~~a~~~s~~------~~a~id~K~l~  193 (213)
T PF04414_consen  137 GGGHYAPRFTKLALETEYAFGHIIPKYALDELD-----------------EDVLRQAIEKSGA------DVAIIDWKSLK  193 (213)
T ss_dssp             -S-TT-HHHHHHHHHCSEEEEEEE-GGGGGG-------------------HHHHHHHHCHCT-------SEEEEETTTS-
T ss_pred             cCcccchhhhhhhhcCCeEEEeeccCcchhhcC-----------------HHHHHHHHHhCCC------cEEEEecCCCC
Confidence            999999999999999999999999999998541                 6899999999943      35999999999


Q ss_pred             hHHHHHHHHHHHhcCCcccC
Q 021113          293 GWQKNAITGFLSEQNIKVGK  312 (317)
Q Consensus       293 ~~~R~~i~~~l~~~gi~v~k  312 (317)
                      +++|++|+++|+++||+|+|
T Consensus       194 ~~~r~~i~~~l~~~gi~v~k  213 (213)
T PF04414_consen  194 SEDRRRIEELLEELGIEVIK  213 (213)
T ss_dssp             HHHHHHHHHHHHHHT-EEEE
T ss_pred             HHHHHHHHHHHHHcCCeeeC
Confidence            99999999999999999986

Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.

>COG1650 Uncharacterized protein conserved in archaea [Function unknown]

Probab=100.00  E-value=1.5e-71  Score=517.41  Aligned_cols=263  Identities=32%  Similarity=0.488  Sum_probs=233.5

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEec
Q 021113            1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSK   80 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflSR   80 (317)
                      |+ +||+|..||||+||+++|.+.++|.++     ...+|+.+++.++.++..++|.|.+|+.    .+..+++|||+||
T Consensus         1 m~-~lv~S~~D~as~ni~~~l~~~~~~~e~-----~~~~~~~~e~~~v~~e~~~~~~d~~~~~----~~~~~e~iif~SR   70 (266)
T COG1650           1 MK-VLVLSASDPASMNIAEYLGEDREFKET-----VVDVLKSGEFYIVATEDTHIYPDYIDAP----LSPKGEYIIFASR   70 (266)
T ss_pred             Cc-eeeecCCChhhHHHHHhcccccccccc-----ccceeeccceeeeecchhhccccccccc----ccCcchhhhhhhh
Confidence            76 899999999999999999999999975     5678999999999999999999999886    3678999999999


Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHHHhCCCCCCeeEEEeecccCCC-CCCC
Q 021113           81 HTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKP  158 (317)
Q Consensus        81 H~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~~~P  158 (317)
                      |+|++++|+||||+||||    +.+|.+||+|++++.++|++ +++++.|++++...++   |+||||||||||| .++|
T Consensus        71 H~S~a~r~slTVH~~GN~----~~~a~~GG~P~~~~va~P~~mka~l~~l~e~~~~~~~---fevt~EaTHHgPt~~~~P  143 (266)
T COG1650          71 HSSKAGRPSLTVHPPGNP----GPEADLGGKPKELAVANPRLMKAALRELKELYDEGGL---FEVTFEATHHGPTELDVP  143 (266)
T ss_pred             hhhccCCCceeecCCCCC----ccccccCCCcchhcccChHHHHHHHHHHHHhccCCcc---EEEEEEeeccCCCCCCCc
Confidence            999999999999999998    47999999999999999995 6888999888765443   9999999999999 8999


Q ss_pred             ceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEeeeCC
Q 021113          159 TMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSG  238 (317)
Q Consensus       159 s~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~~k  238 (317)
                      ++||||||||+||.|+.|++++|++++++|.-  .      .. . .+++++|||||||+|+||+++|++.+||||++||
T Consensus       144 ~~fvEIGStEeeW~d~~age~la~a~~eal~~--~------d~-~-d~~~avg~GGgHYap~~t~~~le~~~~~GH~vpk  213 (266)
T COG1650         144 SLFVEIGSTEEEWTDDEAGEILAEALEEALDN--V------DE-G-DFKAAVGFGGGHYAPKQTKLALESAVDFGHIVPK  213 (266)
T ss_pred             cEEEEecCchHhhcCccchHHHHHHHHHHhcc--c------cc-c-ccceeEeecCcceeehhhhhhhhccccccccccc
Confidence            99999999999999999999999999998631  1      11 1 2358999999999999999999999999999999


Q ss_pred             CccCCCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccC
Q 021113          239 YSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGK  312 (317)
Q Consensus       239 y~l~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k  312 (317)
                      |+.+..+                 ..+|+++++++..     .-.|+|||||+|+.+|+++.++++++||++.+
T Consensus       214 y~~~~l~-----------------~~~i~~~v~~~~~-----a~~~ivD~k~~~~~~r~~v~~~a~~~gle~~~  265 (266)
T COG1650         214 YDHDALT-----------------EVVLKQAVKKSPA-----AEKAIVDRKGSKSNVRRRVKSLAEELGLEVEK  265 (266)
T ss_pred             cchhhcc-----------------HHHHHHHHhcCcc-----ceEEEEeccccccHHHHHHHHHHHhcCccEEe
Confidence            9766431                 2377888877652     34699999999999999999999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	317
1yqe_A	282	Crystal Structure Of Conserved Protein Of Unknown F		2e-20
2gfq_A	298	Structure Of Protein Of Unknown Function Ph0006 Fro		9e-18

>pdb|1YQE|A Chain A, Crystal Structure Of Conserved Protein Of Unknown Function Af0625 Length = 282

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 110/242 (45%), Gaps = 29/242 (11%)
Query: 4   LIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKR 63
           L+V +  D A  N  + LL    ++       + K +++ E  + +  + +I  D +D++
Sbjct: 7   LVVCSESDTAGQNIKDNLLTFADFEEKDV--GEFKLYLSDEFYIAETKERLIYADHIDEK 64
Query: 64  WQEATGEVVGEVIFLSKHTAVSNRPALTVH---PIGVPHLREGEPLPQGGRPGWAAPPNP 120
             +       E++F S+H++   R   TVH    +G            GG+P   A P+P
Sbjct: 65  LAKYID--FEEILFASRHSSKDGRKIFTVHVSGNVGTADF--------GGKPYSLAKPSP 114
Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKPTMFLEIGSTEEYWKRQDAAQV 179
           +      L  +  L     PEFE T+E THHGP   SKP+ F EIGSTEE WK ++AA+V
Sbjct: 115 QTMKNYVLALRERLDRK--PEFEFTMEVTHHGPSEISKPSAFYEIGSTEEEWKDREAAEV 172
Query: 180 XXXXXXXXXXXXXXXXXXXXXRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGY 239
                                 + D N V +G+GG HYAPR  +I+L       H  + Y
Sbjct: 173 ----------VAEAMLDAIRAEKMDWN-VAVGVGGTHYAPRQTEIMLTTTFTFGHNFAKY 221
Query: 240 SL 241
           + 
Sbjct: 222 TF 223

>pdb|2GFQ|A Chain A, Structure Of Protein Of Unknown Function Ph0006 From Pyrococcus Horikoshii Length = 298

Iteration: 1
 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 4   LIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKR 63
           +I  T +D AS N  N L+   G+K   +  +    +   +V +L  N   I  D LD+ 
Sbjct: 25  VIXTTKVDKASXNIXNKLIENFGFKETEYVFEGNPVYKRGDVLILTTNDEXIYYDYLDRE 84
Query: 64  WQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIG 123
            +   G     + F S+H++    PALT H  G            GG+    A   P   
Sbjct: 85  IENQLGFKPEIIAFASRHSSKQKLPALTTHVTG-----NWGKAXYGGKDESFAVAIPSAX 139
Query: 124 PWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVXXX 182
             L LLK   L+      + +  E THHGP   + P+ F+EIGS+EE W    A ++   
Sbjct: 140 K-LSLLKXSELND---LGWTVCYEATHHGPTELEVPSFFIEIGSSEEEWINDRAGEI--- 192
Query: 183 XXXXXXXXXXXXXXXXXXRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLP 242
                             +   K KV LGIGGGHYAP+     L+ D+   H+L  Y+ P
Sbjct: 193 -----IAETIIYVLDNYEKGRSKFKVALGIGGGHYAPKQTKRALEGDLAFGHILPKYAQP 247
Query: 243 M 243
           +
Sbjct: 248 V 248

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	317
2gfq_A	298	UPF0204 protein PH0006; structural genomics, PSI,	5e-93
1yqe_A	282	Hypothetical UPF0204 protein AF0625; AF0625,sulfur	3e-90
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>2gfq_A UPF0204 protein PH0006; structural genomics, PSI, Pro structure initiative, midwest center for structural genomic unknown function; 1.75A {Pyrococcus horikoshii} SCOP: c.56.7.1 Length = 298

 Score =  277 bits (709), Expect = 5e-93
 Identities = 79/316 (25%), Positives = 123/316 (38%), Gaps = 40/316 (12%)

Query: 1   MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDL 60
            + +I+ T +D AS+N  N L+   G+K   +  +    +   +V +L  N  +I  D L
Sbjct: 22  HMKVIMTTKVDKASMNIMNKLIENFGFKETEYVFEGNPVYKRGDVLILTTNDEMIYYDYL 81

Query: 61  DKRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNP 120
           D+  +   G     + F S+H++    PALT H  G            GG+    A   P
Sbjct: 82  DREIENQLGFKPEIIAFASRHSSKQKLPALTTHVTGNWG-----KAMYGGKDESFAVAIP 136

Query: 121 RIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQV 179
                  L     +S      + +  E THHGP     P+ F+EIGS+EE W    A ++
Sbjct: 137 SAMKLSLL----KMSELNDLGWTVCYEATHHGPTELEVPSFFIEIGSSEEEWINDRAGEI 192

Query: 180 IALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGY 239
           IA  I   L         N+ +   K KV LGIGGGHYAP+     L+ D+   H+L  Y
Sbjct: 193 IAETIIYVL--------DNYEKGRSKFKVALGIGGGHYAPKQTKRALEGDLAFGHILPKY 244

Query: 240 SLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAI 299
           + P+                    + +  A               ++D K  +G  +   
Sbjct: 245 AQPVSR------------------DVMIKALNRFGEKVEA----IYVDWKGSRGETRQLA 282

Query: 300 TGFLSEQNIKVGKPND 315
                E  ++  K   
Sbjct: 283 KSLAQELGLEFIKDGS 298

>1yqe_A Hypothetical UPF0204 protein AF0625; AF0625,sulfur SAD, structural genomics, PSI, protein structure initiative; 1.83A {Archaeoglobus fulgidus} SCOP: c.56.7.1 Length = 282

 Score =  269 bits (690), Expect = 3e-90
 Identities = 79/315 (25%), Positives = 130/315 (41%), Gaps = 46/315 (14%)

Query: 2   VILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLD 61
           + L+V +  D A  N  + LL    ++       + K +++ E  + +  + +I  D +D
Sbjct: 5   MKLVVCSESDTAGQNIKDNLLTFADFEEKDV--GEFKLYLSDEFYIAETKERLIYADHID 62

Query: 62  KRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPR 121
           ++  +       E++F S+H++   R   TVH  G            GG+P   A P+P+
Sbjct: 63  EKLAKYID--FEEILFASRHSSKDGRKIFTVHVSGNVG-----TADFGGKPYSLAKPSPQ 115

Query: 122 IGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVI 180
                 L  +     +  PEFE T+E THHGP   SKP+ F EIGSTEE WK ++AA+V+
Sbjct: 116 TMKNYVLALRER--LDRKPEFEFTMEVTHHGPSEISKPSAFYEIGSTEEEWKDREAAEVV 173

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           A  + D +             E     V +G+GG HYAPR  +I+L       H  + Y+
Sbjct: 174 AEAMLDAIR-----------AEKMDWNVAVGVGGTHYAPRQTEIMLTTTFTFGHNFAKYT 222

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
                                  E +  A + + + +        +D KS     K  + 
Sbjct: 223 FEHLTA-----------------EFLVKAVKLSEAEY------IIIDEKSVNSAVKKIVN 259

Query: 301 GFLSEQNIKVGKPND 315
                  ++V K   
Sbjct: 260 EAAEVAGVEVLKSKK 274

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 49/294 (16%), Positives = 92/294 (31%), Gaps = 87/294 (29%)

Query: 34  QDDMKS-FVNQEVRVLQHNKSIIEEDDLDKR-----W------QEATGEVVGEVI----- 76
           QD  KS    +E+        II   D         W      +E   + V EV+     
Sbjct: 39  QDMPKSILSKEEI------DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92

Query: 77  FL-SKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPN-PRIGPWLRLLKKIAL 134
           FL S       +P++    +   ++ + + L    +    A  N  R+ P+L+L  + AL
Sbjct: 93  FLMSPIKTEQRQPSM----MTRMYIEQRDRLYNDNQV--FAKYNVSRLQPYLKL--RQAL 144

Query: 135 SHNLVPEFEITLEGTHHGPVTS-KPTMFLEIGSTEE---------YW----KRQDAAQVI 180
              L P   + +     G + S K  + L++  + +         +W           V+
Sbjct: 145 L-ELRPAKNVLI----DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 181 ALL-----IWDGLGLGGGDAVGN--WNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVW-- 231
            +L       D       D   N      S + ++   +    Y    + +VL  +V   
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY-ENCL-LVL-LNVQNA 256

Query: 232 --------------------VAHLLSGYS---LPMEDPSQSKVDSESKEIGGTW 262
                               V   LS  +   + ++  S +    E K +   +
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	317
2gfq_A	298	UPF0204 protein PH0006; structural genomics, PSI,	100.0
1yqe_A	282	Hypothetical UPF0204 protein AF0625; AF0625,sulfur	100.0

>2gfq_A UPF0204 protein PH0006; structural genomics, PSI, Pro structure initiative, midwest center for structural genomic unknown function; 1.75A {Pyrococcus horikoshii} SCOP: c.56.7.1

Probab=100.00  E-value=1.2e-91  Score=665.69  Aligned_cols=274  Identities=28%  Similarity=0.406  Sum_probs=251.4

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEec
Q 021113            1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSK   80 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflSR   80 (317)
                      ||++||+|++||||+||+++|+++++|++.+..+++.++|+.++|+|+++|+++||+|+||++|++++|+.+|+|||+||
T Consensus        22 mm~~iV~S~~DpAs~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~D~ld~~~~~~~g~~~d~iIflSR  101 (298)
T 2gfq_A           22 HMKVIMTTKVDKASMNIMNKLIENFGFKETEYVFEGNPVYKRGDVLILTTNDEMIYYDYLDREIENQLGFKPEIIAFASR  101 (298)
T ss_dssp             CCEEEEEETTCHHHHHHHHHHHHHSCCEEEEEEETTEEEEEETTEEEEEESSCSTTCTTHHHHHHHHHSCCCSEEEEEEE
T ss_pred             cEEEEEEeCCCchhHHHHHHHHHhcCccccccccCCcceeecCcEEEEEecCceeeccchhhhhhhhccCCCcEEEEEec
Confidence            89999999999999999999999999999877667899999999999999999999999999999989999999999999


Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHHHhCCCCCCeeEEEeecccCCC-CCCC
Q 021113           81 HTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKP  158 (317)
Q Consensus        81 H~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~~~P  158 (317)
                      |+|++++|+||||+||||     ++|.|||+|+++|+|+|++ ++|||.|++++     .++|+|+||||||||| +++|
T Consensus       102 H~s~~~~p~LTvH~tGN~-----g~a~~GG~p~~la~a~P~~~~~lLr~l~~~~-----~~~fevt~EATHHGPt~l~~P  171 (298)
T 2gfq_A          102 HSSKQKLPALTTHVTGNW-----GKAMYGGKDESFAVAIPSAMKLSLLKMSELN-----DLGWTVCYEATHHGPTELEVP  171 (298)
T ss_dssp             EECSSCCCEEEEECCEES-----SCCSSSSCTTEECBBCHHHHHHHHHHHHHHC-----CSCCEEEECCSCSSCCCCCSB
T ss_pred             cccCCCCceEEEeCCCCC-----CccccCCCCCccccCCHHHHHHHHHHHHHhc-----CCCCEEEEeccccCCCCCCCC
Confidence            999999999999999997     5999999999999999996 68888888872     2489999999999999 8999


Q ss_pred             ceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEeeeCC
Q 021113          159 TMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSG  238 (317)
Q Consensus       159 s~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~~k  238 (317)
                      ++||||||||+||+|++|+++||++|+++++        +|.....+++++||||||||+||||+++|++++|||||+||
T Consensus       172 s~FVEIGSte~eW~d~~A~~~vA~av~~~l~--------~~~~~~~~~~~~iG~GGgHYapr~t~~~l~~~~~~GHi~pk  243 (298)
T 2gfq_A          172 SFFIEIGSSEEEWINDRAGEIIAETIIYVLD--------NYEKGRSKFKVALGIGGGHYAPKQTKRALEGDLAFGHILPK  243 (298)
T ss_dssp             EEEEEEEESHHHHTCHHHHHHHHHHHHHHHH--------HHHHHTTTCEEEEEECSCTTCHHHHHHHHHSSEEEEEEECG
T ss_pred             cEEEEeCCCHHHhCChHHHHHHHHHHHHHhc--------cchhcccCCCEEEEeCCCCcChHHHHHHhhCCeeEEeeccc
Confidence            9999999999999999999999999999974        33321124679999999999999999999999999999999


Q ss_pred             CccCCCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCC
Q 021113          239 YSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPN  314 (317)
Q Consensus       239 y~l~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~  314 (317)
                      |+|++.                  ++++++|++++   ++ |...|||||||+|+++|++|+++|+++||+|+|.+
T Consensus       244 y~l~~~------------------~e~l~~ai~~~---~~-~~~~~~iD~K~~k~~~R~~i~~~l~~lgi~v~k~~  297 (298)
T 2gfq_A          244 YAQPVS------------------RDVMIKALNRF---GE-KVEAIYVDWKGSRGETRQLAKSLAQELGLEFIKDG  297 (298)
T ss_dssp             GGCCCC------------------HHHHHHHHTCB---SS-CCCEEEEESTTSCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             cchhcC------------------HHHHHHHHHhh---cC-CCCEEEEecCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence            999963                  47999999986   23 44678999999999999999999999999999875

>1yqe_A Hypothetical UPF0204 protein AF0625; AF0625,sulfur SAD, structural genomics, PSI, protein structure initiative; 1.83A {Archaeoglobus fulgidus} SCOP: c.56.7.1

Probab=100.00  E-value=1.3e-90  Score=654.84  Aligned_cols=268  Identities=29%  Similarity=0.468  Sum_probs=245.0

Q ss_pred             CEEEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEec
Q 021113            1 MVILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSK   80 (317)
Q Consensus         1 M~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflSR   80 (317)
                      ||++||+|++||||+||+++|+++++|++++.  +++++|+.++|+|+++++++||+|++|++|++++|  +|+|||+||
T Consensus         4 mm~~iv~S~~DpAs~~i~~~L~~~~~~~~~~~--~~~~~y~~~~~~l~~~~~~~i~~d~ld~~~~~~~g--~d~iIflSR   79 (282)
T 1yqe_A            4 HMKLVVCSESDTAGQNIKDNLLTFADFEEKDV--GEFKLYLSDEFYIAETKERLIYADHIDEKLAKYID--FEEILFASR   79 (282)
T ss_dssp             SCEEEEEETTCHHHHHHHHHHTTSSCCEEEEE--TTEEEEECSSCEEEEESSCGGGCTTHHHHHTTTCC--CSEEEEEEE
T ss_pred             cEEEEEEeCCCchhHHHHHHHHHhcCcccccC--CCcceeecCcEEEEEecCceeeccchhhhhhhccC--CCEEEEEec
Confidence            89999999999999999999999999998765  58899999999999999999999999999966443  699999999


Q ss_pred             CCCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHHHhCCCCCCeeEEEeecccCCC-CCCC
Q 021113           81 HTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKP  158 (317)
Q Consensus        81 H~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~~~P  158 (317)
                      |+|++++|+||||+||||     ++|.|||+|+++|+|+|++ ++||+.|+++++ +  .++|+|+||||||||| +++|
T Consensus        80 H~s~~~~p~LTvH~tGN~-----~~a~~GG~p~~la~a~P~~~~~~L~~l~~~~~-~--~~~fev~~EATHHGPt~~~~P  151 (282)
T 1yqe_A           80 HSSKDGRKIFTVHVSGNV-----GTADFGGKPYSLAKPSPQTMKNYVLALRERLD-R--KPEFEFTMEVTHHGPSEISKP  151 (282)
T ss_dssp             EECTTCCCEEEEECCBCS-----SCCTTSSCTTCBCCBCHHHHHHHHHHHHTTGG-G--STTCEEEECCSCSSCCCCCSC
T ss_pred             cccCCCCceEEEeCCCCC-----CccccCCCCCccccCCHHHHHHHHHHHHHHhc-c--CCCcEEEEEccccCCCCCCCC
Confidence            999999999999999997     5999999999999999996 688899988764 2  3479999999999999 8999


Q ss_pred             ceEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEeeeCC
Q 021113          159 TMFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSG  238 (317)
Q Consensus       159 s~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~~k  238 (317)
                      ++||||||||+||+|++|+++||++|+++++        +|..   +.+++||||||||+||||+++|++++|||||+||
T Consensus       152 s~FVEIGSte~eW~d~~a~~~vA~av~~~l~--------~~~~---~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~pk  220 (282)
T 1yqe_A          152 SAFYEIGSTEEEWKDREAAEVVAEAMLDAIR--------AEKM---DWNVAVGVGGTHYAPRQTEIMLTTTFTFGHNFAK  220 (282)
T ss_dssp             EEEEEEEESHHHHTCHHHHHHHHHHHHHHHH--------CCCC---CCEEEEEECSCTTCHHHHHHHHHBSEEEEEEECG
T ss_pred             cEEEEeCCCHHHhCChHHHHHHHHHHHHHhc--------cccc---cCCEEEEeCCCCcChHHHHHHhhCCeeEEeeccc
Confidence            9999999999999999999999999999985        2332   4678999999999999999999999999999999


Q ss_pred             CccC-CCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCCC
Q 021113          239 YSLP-MEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPND  315 (317)
Q Consensus       239 y~l~-~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~~  315 (317)
                      |+++ +.                  ++++.+|+++++      ...|||||||+|+++|++|+++|+++||+|+|+++
T Consensus       221 y~l~~~~------------------~e~~~~ai~~~~------~~~~~iD~K~~k~~~r~~i~~~l~~~gi~v~k~~~  274 (282)
T 1yqe_A          221 YTFEHLT------------------AEFLVKAVKLSE------AEYIIIDEKSVNSAVKKIVNEAAEVAGVEVLKSKK  274 (282)
T ss_dssp             GGGGGCC------------------HHHHHHHHHHHT------CSEEEECTTTCCHHHHHHHHHHHHHHTCEEEEHHH
T ss_pred             cchhhcC------------------HHHHHHHHHhcC------CCEEEEecCCCCHHHHHHHHHHHHHCCCEEEehhH
Confidence            9998 53                  578999999974      45699999999999999999999999999999754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	317
d2gfqa1	274	c.56.7.1 (A:1-274) Hypothetical protein PH0006 {Py	9e-92
d1yqea1	278	c.56.7.1 (A:1-278) Hypothetical protein AF0625 {Ar	4e-89

>d2gfqa1 c.56.7.1 (A:1-274) Hypothetical protein PH0006 {Pyrococcus horikoshii [TaxId: 53953]} Length = 274

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: AF0625-like
family: AF0625-like
domain: Hypothetical protein PH0006
species: Pyrococcus horikoshii [TaxId: 53953]

 Score =  272 bits (696), Expect = 9e-92
 Identities = 79/312 (25%), Positives = 123/312 (39%), Gaps = 40/312 (12%)

Query: 2   VILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLD 61
           + +I+ T +D AS+N  N L+   G+K   +  +    +   +V +L  N  +I  D LD
Sbjct: 1   MKVIMTTKVDKASMNIMNKLIENFGFKETEYVFEGNPVYKRGDVLILTTNDEMIYYDYLD 60

Query: 62  KRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPR 121
           +  +   G     + F S+H++    PALT H  G            GG+    A   P 
Sbjct: 61  REIENQLGFKPEIIAFASRHSSKQKLPALTTHVTGNWG-----KAMYGGKDESFAVAIPS 115

Query: 122 IGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVI 180
                 L     +S      + +  E THHGP     P+ F+EIGS+EE W    A ++I
Sbjct: 116 AMKLSLL----KMSELNDLGWTVCYEATHHGPTELEVPSFFIEIGSSEEEWINDRAGEII 171

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           A  I   L         N+ +   K KV LGIGGGHYAP+     L+ D+   H+L  Y+
Sbjct: 172 AETIIYVL--------DNYEKGRSKFKVALGIGGGHYAPKQTKRALEGDLAFGHILPKYA 223

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
            P+                    + +  A               ++D K  +G  +    
Sbjct: 224 QPVSR------------------DVMIKALNRFGEKVEA----IYVDWKGSRGETRQLAK 261

Query: 301 GFLSEQNIKVGK 312
               E  ++  K
Sbjct: 262 SLAQELGLEFIK 273

>d1yqea1 c.56.7.1 (A:1-278) Hypothetical protein AF0625 {Archaeoglobus fulgidus [TaxId: 2234]} Length = 278

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: AF0625-like
family: AF0625-like
domain: Hypothetical protein AF0625
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score =  265 bits (680), Expect = 4e-89
 Identities = 78/315 (24%), Positives = 129/315 (40%), Gaps = 46/315 (14%)

Query: 2   VILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLD 61
           + L+V +  D A  N  + LL    ++       + K +++ E  + +  + +I  D +D
Sbjct: 1   MKLVVCSESDTAGQNIKDNLLTFADFEEKDVG--EFKLYLSDEFYIAETKERLIYADHID 58

Query: 62  KRWQEATGEVVGEVIFLSKHTAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPR 121
           ++  +       E++F S+H++   R   TVH  G            GG+P   A P+P+
Sbjct: 59  EKLAKYID--FEEILFASRHSSKDGRKIFTVHVSGNVG-----TADFGGKPYSLAKPSPQ 111

Query: 122 IGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVI 180
                  +  +    +  PEFE T+E THHGP   SKP+ F EIGSTEE WK ++AA+V+
Sbjct: 112 TMKNY--VLALRERLDRKPEFEFTMEVTHHGPSEISKPSAFYEIGSTEEEWKDREAAEVV 169

Query: 181 ALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 240
           A  + D               E     V +G+GG HYAPR  +I+L       H  + Y+
Sbjct: 170 AEAMLDA-----------IRAEKMDWNVAVGVGGTHYAPRQTEIMLTTTFTFGHNFAKYT 218

Query: 241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIT 300
                                  E +  A + + + +        +D KS     K  + 
Sbjct: 219 FEHLTA-----------------EFLVKAVKLSEAEY------IIIDEKSVNSAVKKIVN 255

Query: 301 GFLSEQNIKVGKPND 315
                  ++V K   
Sbjct: 256 EAAEVAGVEVLKSKK 270

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	317
d2gfqa1	274	Hypothetical protein PH0006 {Pyrococcus horikoshii	100.0
d1yqea1	278	Hypothetical protein AF0625 {Archaeoglobus fulgidu	100.0

>d2gfqa1 c.56.7.1 (A:1-274) Hypothetical protein PH0006 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: AF0625-like
family: AF0625-like
domain: Hypothetical protein PH0006
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=1.3e-87  Score=628.96  Aligned_cols=271  Identities=28%  Similarity=0.416  Sum_probs=244.3

Q ss_pred             EEEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEecC
Q 021113            2 VILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKH   81 (317)
Q Consensus         2 ~~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflSRH   81 (317)
                      |.|||+|++||||+||+++|+++.+|++.+..+++..+|+.++++++.+++.+|++|+||++|++++|+++|+|||+|||
T Consensus         1 M~liv~S~~D~AS~ni~~~Lle~~~w~~~~~~~~~~~~y~~~~~~l~~~~~~~i~~D~ld~~~~~~~~~~~d~iif~SrH   80 (274)
T d2gfqa1           1 MKVIMTTKVDKASMNIMNKLIENFGFKETEYVFEGNPVYKRGDVLILTTNDEMIYYDYLDREIENQLGFKPEIIAFASRH   80 (274)
T ss_dssp             CEEEEEETTCHHHHHHHHHHHHHSCCEEEEEEETTEEEEEETTEEEEEESSCSTTCTTHHHHHHHHHSCCCSEEEEEEEE
T ss_pred             CEEEEEcCCCchhHHHHHHHHHhcCCcccCcccCCCceeecCCEEEEEecCCeEeecccchHHHHHhCCCceEEEEEecc
Confidence            25799999999999999999999999998776678899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCch-HHHHHHHHHHHhCCCCCCeeEEEeecccCCC-CCCCc
Q 021113           82 TAVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRIG-PWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKPT  159 (317)
Q Consensus        82 ~s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l~-~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~~~Ps  159 (317)
                      +|++++|+||||+||||     ++|+|||+|+++++|+|+++ .+++.|+++   +.  ++|+||||||||||| +++|+
T Consensus        81 ~s~s~~p~LTvH~~Gn~-----~~~~~GG~~~~~~~~~P~~~~~~l~~~~~~---~~--~~f~vt~EaTHHGPt~l~~Ps  150 (274)
T d2gfqa1          81 SSKQKLPALTTHVTGNW-----GKAMYGGKDESFAVAIPSAMKLSLLKMSEL---ND--LGWTVCYEATHHGPTELEVPS  150 (274)
T ss_dssp             ECSSCCCEEEEECCEES-----SCCSSSSCTTEECBBCHHHHHHHHHHHHHH---CC--SCCEEEECCSCSSCCCCCSBE
T ss_pred             ccCCCCceEEEeCCCCC-----CCcCCCCCCCccccCCCHHHHHHHHHHHHh---cc--cCceEEEEEeccCCccCCCce
Confidence            99999999999999998     58999999999999999964 444444443   32  479999999999999 89999


Q ss_pred             eEEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEeeeCCC
Q 021113          160 MFLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGY  239 (317)
Q Consensus       160 ~FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~~ky  239 (317)
                      +||||||||+||+|++|++++|++|+++|+.        |.+...+.+++||||||||+||||++++++++|||||+|||
T Consensus       151 ~FiEIGSte~~W~~~~a~~~~A~~i~~~l~~--------~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~iGHil~ky  222 (274)
T d2gfqa1         151 FFIEIGSSEEEWINDRAGEIIAETIIYVLDN--------YEKGRSKFKVALGIGGGHYAPKQTKRALEGDLAFGHILPKY  222 (274)
T ss_dssp             EEEEEEESHHHHTCHHHHHHHHHHHHHHHHH--------HHHHTTTCEEEEEECSCTTCHHHHHHHHHSSEEEEEEECGG
T ss_pred             EEEEecCCHHHhCCcHHHHHHHHHHHHHccC--------ccccCccCCEEEEeCCCccchhHhhhhhcCCeeEEeecccc
Confidence            9999999999999999999999999998752        22222356889999999999999999999999999999999


Q ss_pred             ccCCCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccC
Q 021113          240 SLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGK  312 (317)
Q Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k  312 (317)
                      ++++.                  ++++.+|++++...    ..+|+|||||+|+|+|++|+++|+++||+|+|
T Consensus       223 al~~~------------------~~~l~~~i~~~~~~----~~~a~iD~K~~kg~~r~~i~~~l~~~gl~vik  273 (274)
T d2gfqa1         223 AQPVS------------------RDVMIKALNRFGEK----VEAIYVDWKGSRGETRQLAKSLAQELGLEFIK  273 (274)
T ss_dssp             GCCCC------------------HHHHHHHHTCBSSC----CCEEEEESTTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred             ccccC------------------HHHHHHHHHhcccC----CCEEEEeccCCCHHHHHHHHHHHHHcCCeeec
Confidence            99874                  47899999887543    45899999999999999999999999999987

>d1yqea1 c.56.7.1 (A:1-278) Hypothetical protein AF0625 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: AF0625-like
family: AF0625-like
domain: Hypothetical protein AF0625
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=2.8e-87  Score=628.08  Aligned_cols=267  Identities=29%  Similarity=0.459  Sum_probs=241.1

Q ss_pred             EEEEEeCCCcccccHHHHHHcCCCCCCCCCcCCCcceeeeccEEEEEeccccccccchhHHHHhhcCCCccEEEEEecCC
Q 021113            3 ILIVATTIDPASINPANALLAMPGWKPGPFFQDDMKSFVNQEVRVLQHNKSIIEEDDLDKRWQEATGEVVGEVIFLSKHT   82 (317)
Q Consensus         3 ~~iv~S~~DpAs~ni~~~Ll~~~~w~~~~~~~~~~~~~~~~~~~l~~~d~~~I~~D~Ld~~~~~~~g~~~d~iIflSRH~   82 (317)
                      .+||+|+.||||+||+++|+++.+|++.+.  +++++|+.++|+|+.+++.+|++|+||++|++.  .++|+|||+|||+
T Consensus         2 ~liv~S~~D~AS~ni~~~L~~l~~w~~~~~--~~~~~~~~~~~~l~~~~~~~i~~D~lD~~~~~~--~~~d~iiflSRH~   77 (278)
T d1yqea1           2 KLVVCSESDTAGQNIKDNLLTFADFEEKDV--GEFKLYLSDEFYIAETKERLIYADHIDEKLAKY--IDFEEILFASRHS   77 (278)
T ss_dssp             EEEEEETTCHHHHHHHHHHTTSSCCEEEEE--TTEEEEECSSCEEEEESSCGGGCTTHHHHHTTT--CCCSEEEEEEEEE
T ss_pred             EEEEEcCCChhhHHHHHHHHHhcCCccCCC--CCcceeecCcEEEEEecccceeccchhhhhccc--CCCCEEEEEeccc
Confidence            679999999999999999999999987643  467899999999999999999999999999764  4699999999999


Q ss_pred             CCCCCCceeeecCCCCCCCCCCCCCCCCCCCcccCCCCCc-hHHHHHHHHHHHhCCCCCCeeEEEeecccCCC-CCCCce
Q 021113           83 AVSNRPALTVHPIGVPHLREGEPLPQGGRPGWAAPPNPRI-GPWLRLLKKIALSHNLVPEFEITLEGTHHGPV-TSKPTM  160 (317)
Q Consensus        83 s~~~~p~LTvH~tGN~~~~~~~~a~~GG~p~~la~a~P~l-~~~l~~L~~~~~~~~~~~~fev~~EATHHGPt-~~~Ps~  160 (317)
                      |++|+|+||||+||||     +.++|||+|++++||+|++ +.|++.|++.+   +..++|+||||||||||| +++|++
T Consensus        78 s~sg~p~LTvH~~Gn~-----~~~~~GG~~~~~~~~~P~~~~~~l~~l~~~~---~~~~~f~vt~EaTHHGPt~l~~P~~  149 (278)
T d1yqea1          78 SKDGRKIFTVHVSGNV-----GTADFGGKPYSLAKPSPQTMKNYVLALRERL---DRKPEFEFTMEVTHHGPSEISKPSA  149 (278)
T ss_dssp             CTTCCCEEEEECCBCS-----SCCTTSSCTTCBCCBCHHHHHHHHHHHHTTG---GGSTTCEEEECCSCSSCCCCCSCEE
T ss_pred             cCCCCceEEEeCCCCC-----CCCCCCCCCCcccCCChHHHHHHHHHHHHhc---ccCCCceEEEEEeccCCccCCCceE
Confidence            9999999999999998     5899999999999999996 55566665543   345689999999999999 899999


Q ss_pred             EEEecCChhhhcChhHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCceEEEeCCCCCccchhhheeecCeeEEeeeCCCc
Q 021113          161 FLEIGSTEEYWKRQDAAQVIALLIWDGLGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS  240 (317)
Q Consensus       161 FvEIGSte~eW~d~~a~~~vA~av~~~l~~~~~~~~~~~~~~~~~~~~~ig~GGgHYapr~t~~~l~~~~~~GHi~~ky~  240 (317)
                      ||||||||+||+|++|++++|++|+++++.+.           .+.+++||||||||+||||++++++++|||||+|||+
T Consensus       150 FiEIGSte~~W~d~~a~~~~A~~i~~~~~~~~-----------~~~~~~vg~GGgHYapr~t~i~l~~~~~iGHil~kya  218 (278)
T d1yqea1         150 FYEIGSTEEEWKDREAAEVVAEAMLDAIRAEK-----------MDWNVAVGVGGTHYAPRQTEIMLTTTFTFGHNFAKYT  218 (278)
T ss_dssp             EEEEEESHHHHTCHHHHHHHHHHHHHHHHCCC-----------CCCEEEEEECSCTTCHHHHHHHHHBSEEEEEEECGGG
T ss_pred             EEEecCCHHHhCCcHHHHHHHHHHHhhccccC-----------CCCcEEEEeCCCccchhHhHhhhcCCeEEEeeccccc
Confidence            99999999999999999999999999986421           2468899999999999999999999999999999999


Q ss_pred             cCCCCCCCcccccccccccccHHHHHHHHHHhhhccCCCCceEEEEecCCCchHHHHHHHHHHHhcCCcccCCCC
Q 021113          241 LPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAITGFLSEQNIKVGKPND  315 (317)
Q Consensus       241 l~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~~s~~~~~~g~~~a~id~Ks~k~~~R~~i~~~l~~~gi~v~k~~~  315 (317)
                      |+..                 .+++|++|++++++.      +|+|||||+|+|+|++|+++|+++||+|+|.++
T Consensus       219 l~~l-----------------~~e~i~~ai~~s~~~------~a~vD~K~~k~~~R~~i~~~l~~~gl~v~k~k~  270 (278)
T d1yqea1         219 FEHL-----------------TAEFLVKAVKLSEAE------YIIIDEKSVNSAVKKIVNEAAEVAGVEVLKSKK  270 (278)
T ss_dssp             GGGC-----------------CHHHHHHHHHHHTCS------EEEECTTTCCHHHHHHHHHHHHHHTCEEEEHHH
T ss_pred             cccc-----------------CHHHHHHHHHhCCCc------EEEEEcCCCCHHHHHHHHHHHHHcCCeEEehhh
Confidence            9864                 258999999999654      599999999999999999999999999998754