Citrus Sinensis ID: 021118

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
MAAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATLDSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSITGGGQEIRLDCRRVN
cHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHccccccccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHcccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccccccccHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccccccc
cHHHHHHHHHHHHHHHcccccccEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHccccccccccccccHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHcccccccccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccccccEcccccEcc
MAAVVALIFALAmfpvsspvsalssnyysktcpklETAVTNAVKKAMKNDKTVPAALLRMHfhdcfirgcdasvlleskgkntaekdgppnislhAFYVIDNAKKAVEAMCPGVVSCADILALSARDAValsggptwdvpkgrkdgriskatdtrqlpaptfnisQLQQSFSQRGLSMADLVALsgghslgfshcsSFQNRIHnfnatldidpsispsfatslrhvcpahnkvknagatldssttvfDNAYYKLLLQGkslfssdqsllttpkTKALVSKFARSKSAFENAFVQSMIRMSsitgggqeirldcrrvn
MAAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKntaekdgppniSLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVAlsggptwdvpkgrkdgRISKAtdtrqlpaptfNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVknagatldsstTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRmssitgggqeirldcrrvn
MAAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATLDSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSITGGGQEIRLDCRRVN
**AVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLE*************NISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWD***************************************MADLVALSGGHSLGFSHCSSFQNRIHNFNA****************************AGATLDSSTTVFDNAYYKLLLQGKSLFS****LL******ALVSKF******FENAFVQSMIR*******************
*AAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCP***K**NAGATLDSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSITGGGQEIRLDCRRVN
MAAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATLDSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSITGGGQEIRLDCRRVN
MAAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATLDSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSITGGGQEIRLDCRRVN
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iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATLDSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSITGGGQEIRLDCRRVN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query317 2.2.26 [Sep-21-2011]
Q43872317 Peroxidase 64 OS=Arabidop yes no 0.996 0.996 0.718 1e-138
Q9LT91322 Peroxidase 66 OS=Arabidop no no 0.996 0.981 0.532 3e-96
Q9SZB9325 Peroxidase 47 OS=Arabidop no no 0.965 0.941 0.456 6e-76
Q43387328 Peroxidase 71 OS=Arabidop no no 0.927 0.896 0.455 2e-70
O23044326 Peroxidase 3 OS=Arabidops no no 0.996 0.969 0.423 3e-70
Q96522325 Peroxidase 45 OS=Arabidop no no 0.917 0.895 0.448 4e-70
P22196330 Cationic peroxidase 2 OS= N/A no 0.908 0.872 0.436 7e-70
O80822328 Peroxidase 25 OS=Arabidop no no 0.921 0.890 0.445 3e-69
P37834326 Peroxidase 1 OS=Oryza sat no no 0.930 0.904 0.445 2e-68
Q96518323 Peroxidase 16 OS=Arabidop no no 0.971 0.953 0.421 3e-68
>sp|Q43872|PER64_ARATH Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1 Back     alignment and function desciption
 Score =  491 bits (1265), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 227/316 (71%), Positives = 265/316 (83%)

Query: 1   MAAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRM 60
           M A +  +  + +F VS  V ALS +YY  TCP+ +  VTNAVKKAM ND+TVPAALLRM
Sbjct: 1   MNAHMLNLLVIVIFVVSFDVQALSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRM 60

Query: 61  HFHDCFIRGCDASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADI 120
           HFHDCF+RGCD SVLL+SKGKN AEKDGPPNISLHAFYVIDNAKKA+E  CPG+VSCADI
Sbjct: 61  HFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKALEEQCPGIVSCADI 120

Query: 121 LALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMAD 180
           L+L+ARDAVALSGGPTW VPKGRKDGRISKA +TRQLPAPTFNISQL+Q+F QRGLSM D
Sbjct: 121 LSLAARDAVALSGGPTWAVPKGRKDGRISKAIETRQLPAPTFNISQLRQNFGQRGLSMHD 180

Query: 181 LVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATL 240
           LVALSGGH+LGF+HCSSFQNR+H FN   ++DP+++PSFA  L  VCPAHN VKNAG+ +
Sbjct: 181 LVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAGSNM 240

Query: 241 DSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMS 300
           D + T FDN YYK+L+QGKSLFSSD+SLL  P TK LV+K+A S   FE AFV+SMI+MS
Sbjct: 241 DGTVTSFDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEFERAFVKSMIKMS 300

Query: 301 SITGGGQEIRLDCRRV 316
           SI+G G E+RL+CRRV
Sbjct: 301 SISGNGNEVRLNCRRV 316
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9LT91|PER66_ARATH Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1 Back     alignment and function description
>sp|Q9SZB9|PER47_ARATH Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2 Back     alignment and function description
>sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1 Back     alignment and function description
>sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1 Back     alignment and function description
>sp|Q96522|PER45_ARATH Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1 Back     alignment and function description
>sp|P22196|PER2_ARAHY Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1 Back     alignment and function description
>sp|O80822|PER25_ARATH Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2 Back     alignment and function description
>sp|P37834|PER1_ORYSJ Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2 Back     alignment and function description
>sp|Q96518|PER16_ARATH Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query317
225459726316 PREDICTED: peroxidase 64-like isoform 1 0.962 0.965 0.846 1e-153
255539044318 Peroxidase 64 precursor, putative [Ricin 0.955 0.952 0.842 1e-152
359492099320 PREDICTED: peroxidase 64-like isoform 2 0.955 0.946 0.848 1e-152
224061969317 predicted protein [Populus trichocarpa] 0.993 0.993 0.842 1e-151
356553351316 PREDICTED: peroxidase 64-like [Glycine m 0.987 0.990 0.784 1e-143
449450658317 PREDICTED: peroxidase 64-like [Cucumis s 0.933 0.933 0.787 1e-140
297795355317 peroxidase 64 [Arabidopsis lyrata subsp. 0.996 0.996 0.727 1e-138
255580625317 Peroxidase 64 precursor, putative [Ricin 0.943 0.943 0.79 1e-138
15238309317 peroxidase 64 [Arabidopsis thaliana] gi| 0.996 0.996 0.718 1e-136
91940084319 peroxidase [Striga asiatica] 0.993 0.987 0.741 1e-136
>gi|225459726|ref|XP_002285892.1| PREDICTED: peroxidase 64-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 259/306 (84%), Positives = 281/306 (91%), Gaps = 1/306 (0%)

Query: 11  LAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGC 70
           L MFPVSSPV ALS NYY +TCPK E+ +++AVKKAM NDKTVPAALLRMHFHDCFIRGC
Sbjct: 11  LVMFPVSSPVYALSLNYYDQTCPKAESTISDAVKKAMTNDKTVPAALLRMHFHDCFIRGC 70

Query: 71  DASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVA 130
           DASVLL+S GKNTAEKDGPPNISLHAFYVIDNAKKAVEA+CPGVVSCADILAL+ RDAVA
Sbjct: 71  DASVLLKSVGKNTAEKDGPPNISLHAFYVIDNAKKAVEALCPGVVSCADILALAVRDAVA 130

Query: 131 LSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSL 190
           LSGGPTW+V KGRKDGRISKAT+TRQLPAPTFNISQLQQSFSQRGLSM DLVALSGGH+L
Sbjct: 131 LSGGPTWNVSKGRKDGRISKATETRQLPAPTFNISQLQQSFSQRGLSMEDLVALSGGHTL 190

Query: 191 GFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATLDSSTTVFDNA 250
           GFSHCSSFQNRIHNFN+T D+DPS+ PSFA SLR VCP HNKVKNAGAT+DSS+T FDN 
Sbjct: 191 GFSHCSSFQNRIHNFNSTHDVDPSVHPSFAASLRSVCPLHNKVKNAGATMDSSSTTFDNT 250

Query: 251 YYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSITGGGQEIR 310
           YYKLLLQG+SLFSSDQ+LLTT KTKALVS+FA SK  FE AFV+SMI+MSSIT GGQE+R
Sbjct: 251 YYKLLLQGRSLFSSDQALLTTTKTKALVSQFASSKDEFEKAFVKSMIKMSSIT-GGQEVR 309

Query: 311 LDCRRV 316
           LDCR V
Sbjct: 310 LDCRVV 315

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255539044|ref|XP_002510587.1| Peroxidase 64 precursor, putative [Ricinus communis] gi|223551288|gb|EEF52774.1| Peroxidase 64 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359492099|ref|XP_003634364.1| PREDICTED: peroxidase 64-like isoform 2 [Vitis vinifera] gi|302141732|emb|CBI18935.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224061969|ref|XP_002300689.1| predicted protein [Populus trichocarpa] gi|222842415|gb|EEE79962.1| predicted protein [Populus trichocarpa] gi|225626267|gb|ACN97183.1| peroxidase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356553351|ref|XP_003545020.1| PREDICTED: peroxidase 64-like [Glycine max] Back     alignment and taxonomy information
>gi|449450658|ref|XP_004143079.1| PREDICTED: peroxidase 64-like [Cucumis sativus] gi|449500437|ref|XP_004161097.1| PREDICTED: peroxidase 64-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297795355|ref|XP_002865562.1| peroxidase 64 [Arabidopsis lyrata subsp. lyrata] gi|297311397|gb|EFH41821.1| peroxidase 64 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255580625|ref|XP_002531135.1| Peroxidase 64 precursor, putative [Ricinus communis] gi|223529248|gb|EEF31220.1| Peroxidase 64 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15238309|ref|NP_199033.1| peroxidase 64 [Arabidopsis thaliana] gi|26397658|sp|Q43872.1|PER64_ARATH RecName: Full=Peroxidase 64; Short=Atperox P64; AltName: Full=ATP17a; AltName: Full=PRXR4; Flags: Precursor gi|1402910|emb|CAA66960.1| peroxidase [Arabidopsis thaliana] gi|1429223|emb|CAA67550.1| peroxidase [Arabidopsis thaliana] gi|9757963|dbj|BAB08451.1| peroxidase [Arabidopsis thaliana] gi|17381012|gb|AAL36318.1| putative peroxidase [Arabidopsis thaliana] gi|20465877|gb|AAM20043.1| putative peroxidase [Arabidopsis thaliana] gi|332007393|gb|AED94776.1| peroxidase 64 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|91940084|gb|ABE66389.1| peroxidase [Striga asiatica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query317
TAIR|locus:2165820317 PER64 "peroxidase 64" [Arabido 0.996 0.996 0.718 8e-124
TAIR|locus:2166508322 AT5G51890 [Arabidopsis thalian 0.996 0.981 0.532 1.1e-87
TAIR|locus:2119251325 AT4G33420 [Arabidopsis thalian 0.965 0.941 0.459 6.3e-69
TAIR|locus:2207210326 RCI3 "RARE COLD INDUCIBLE GENE 0.996 0.969 0.423 1.7e-66
TAIR|locus:2128921325 AT4G30170 [Arabidopsis thalian 0.936 0.913 0.451 9.4e-66
TAIR|locus:2164366328 AT5G64120 [Arabidopsis thalian 0.924 0.893 0.457 5.2e-65
TAIR|locus:2120061329 AT4G37530 [Arabidopsis thalian 0.977 0.942 0.436 2.3e-64
TAIR|locus:2817952325 AT1G05240 [Arabidopsis thalian 0.971 0.947 0.437 4.7e-64
TAIR|locus:2207215325 AT1G05250 [Arabidopsis thalian 0.971 0.947 0.437 4.7e-64
TAIR|locus:2093099329 AT3G21770 [Arabidopsis thalian 0.977 0.942 0.410 4.7e-64
TAIR|locus:2165820 PER64 "peroxidase 64" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1217 (433.5 bits), Expect = 8.0e-124, P = 8.0e-124
 Identities = 227/316 (71%), Positives = 265/316 (83%)

Query:     1 MAAVVALIFALAMFPVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRM 60
             M A +  +  + +F VS  V ALS +YY  TCP+ +  VTNAVKKAM ND+TVPAALLRM
Sbjct:     1 MNAHMLNLLVIVIFVVSFDVQALSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRM 60

Query:    61 HFHDCFIRGCDASVLLESKGKNTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADI 120
             HFHDCF+RGCD SVLL+SKGKN AEKDGPPNISLHAFYVIDNAKKA+E  CPG+VSCADI
Sbjct:    61 HFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKALEEQCPGIVSCADI 120

Query:   121 LALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMAD 180
             L+L+ARDAVALSGGPTW VPKGRKDGRISKA +TRQLPAPTFNISQL+Q+F QRGLSM D
Sbjct:   121 LSLAARDAVALSGGPTWAVPKGRKDGRISKAIETRQLPAPTFNISQLRQNFGQRGLSMHD 180

Query:   181 LVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATL 240
             LVALSGGH+LGF+HCSSFQNR+H FN   ++DP+++PSFA  L  VCPAHN VKNAG+ +
Sbjct:   181 LVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAGSNM 240

Query:   241 DSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMS 300
             D + T FDN YYK+L+QGKSLFSSD+SLL  P TK LV+K+A S   FE AFV+SMI+MS
Sbjct:   241 DGTVTSFDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEFERAFVKSMIKMS 300

Query:   301 SITGGGQEIRLDCRRV 316
             SI+G G E+RL+CRRV
Sbjct:   301 SISGNGNEVRLNCRRV 316
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2166508 AT5G51890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119251 AT4G33420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128921 AT4G30170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164366 AT5G64120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120061 AT4G37530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2817952 AT1G05240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207215 AT1G05250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093099 AT3G21770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q43872PER64_ARATH1, ., 1, 1, ., 1, ., 70.71830.99680.9968yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-166
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 9e-88
pfam00141180 pfam00141, peroxidase, Peroxidase 2e-67
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 4e-22
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-14
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 4e-13
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 7e-13
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 2e-10
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 4e-09
cd00692328 cd00692, ligninase, Ligninase and other manganese- 1e-04
pfam00141180 pfam00141, peroxidase, Peroxidase 0.002
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  464 bits (1196), Expect = e-166
 Identities = 159/298 (53%), Positives = 216/298 (72%), Gaps = 5/298 (1%)

Query: 23  LSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKN 82
           LS  +YSK+CP  E+ V + V+ A+K D  + AALLR+HFHDCF+RGCDASVLL+S   N
Sbjct: 2   LSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANN 61

Query: 83  TAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKG 142
           T+EKD PPN+SL  F VID+ K A+EA CPGVVSCADILAL+ARDAV L+GGP+++VP G
Sbjct: 62  TSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLG 121

Query: 143 RKDGRISKATDTRQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRI 202
           R+DGR+S A D   LP+P F++SQL   F+ +GL++ DLVALSG H++G +HCSSF +R+
Sbjct: 122 RRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSDRL 181

Query: 203 HNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATLDSST-TVFDNAYYKLLLQGKSL 261
           +NF+ T D DP++ P++A  LR  CPA          LD  T   FDN+YYK LL G+ L
Sbjct: 182 YNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTL-VPLDPGTPNTFDNSYYKNLLAGRGL 240

Query: 262 FSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSI---TGGGQEIRLDCRRV 316
            +SDQ+LL+ P+T+A+V+++A ++ AF   F  +M++M +I   TG   EIR +CR V
Sbjct: 241 LTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 317
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.96
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.53
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-108  Score=781.37  Aligned_cols=311  Identities=43%  Similarity=0.750  Sum_probs=289.0

Q ss_pred             hHHHHHHHHHhc-cCCCCccCCCccccccCCccHHHHHHHHHHHHHHcCCCcchhhHHhhhccccccCCCceEeecCCCC
Q 021118            3 AVVALIFALAMF-PVSSPVSALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGK   81 (317)
Q Consensus         3 ~~~~~~~~~~~~-~~~~~~~~l~~~fY~~sCp~~e~iVr~~v~~~~~~~~~~a~~lLRL~FHDcfv~GcDaSill~~~~~   81 (317)
                      +|+.++|+|++. ....+.++|+++||++|||++|+||++.|++++.+||+++|++|||+||||||+||||||||+++  
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~--   81 (324)
T PLN03030          4 FIVILFFLLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS--   81 (324)
T ss_pred             ehhHHHHHHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC--
Confidence            455566665553 33444577999999999999999999999999999999999999999999999999999999864  


Q ss_pred             CCCCCCCCCCCCcchhhhHHHHHHHHHhhCCCCccHHHHHHHhhhhHhhhcCCCCcccCCCCCCCCCCCcccCCCCCCCC
Q 021118           82 NTAEKDGPPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDTRQLPAPT  161 (317)
Q Consensus        82 ~~~E~~~~~N~~L~g~~~I~~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~  161 (317)
                       .+||++++|.+|+||++|+.||++||++||++|||||||||||||||+++|||.|+|++||||+++|.+.++.+||+|+
T Consensus        82 -~~Ek~a~~N~~l~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~  160 (324)
T PLN03030         82 -NTEKTALPNLLLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFT  160 (324)
T ss_pred             -cccccCCCCcCcchHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCC
Confidence             3699999999999999999999999999999999999999999999999999999999999999998776667899999


Q ss_pred             CCHHHHHHHHHHcCCChhhhhhhhcCccccccccCCcccccccCCCCC-CCCCCCCHHHHHHHhhhCCC-CCCCCCCCcc
Q 021118          162 FNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQNRIHNFNATL-DIDPSISPSFATSLRHVCPA-HNKVKNAGAT  239 (317)
Q Consensus       162 ~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~hc~~f~~Rl~nf~g~~-~~dp~~d~~~~~~L~~~Cp~-~~~~~~~~~~  239 (317)
                      .++++|++.|+++||+.+|||+||||||||++||.+|.+|||||++++ .+||+||+.|++.||+.||. ++.. ..+++
T Consensus       161 ~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~-~~~~l  239 (324)
T PLN03030        161 DSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGS-RRIAL  239 (324)
T ss_pred             CCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCC-ccccC
Confidence            999999999999999999999999999999999999999999999875 58999999999999999995 3323 46889


Q ss_pred             CCCCccccChHHHHHhhcCccccccccccccChhHHHHHHHHhhCh----HHHHHHHHHHHHHhHcc---CCCCCccccC
Q 021118          240 LDSSTTVFDNAYYKLLLQGKSLFSSDQSLLTTPKTKALVSKFARSK----SAFENAFVQSMIRMSSI---TGGGQEIRLD  312 (317)
Q Consensus       240 D~~tp~~FDN~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~yA~~~----~~F~~~Fa~Am~Km~~l---tg~~GeiR~~  312 (317)
                      |+.||.+|||+||+||+.++|+|+|||+|+.|++|+++|++||.|+    +.|+++|++||+|||+|   ||.+||||++
T Consensus       240 D~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~  319 (324)
T PLN03030        240 DTGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKV  319 (324)
T ss_pred             CCCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceecc
Confidence            9999999999999999999999999999999999999999999875    59999999999999999   9999999999


Q ss_pred             CccCC
Q 021118          313 CRRVN  317 (317)
Q Consensus       313 C~~~n  317 (317)
                      |+.+|
T Consensus       320 C~~vN  324 (324)
T PLN03030        320 CSAIN  324 (324)
T ss_pred             ccccC
Confidence            99998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 4e-70
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 9e-67
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 8e-66
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 6e-64
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 6e-63
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 2e-62
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-62
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 3e-62
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 3e-62
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 3e-62
1sch_A294 Peanut Peroxidase Length = 294 3e-62
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 3e-62
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 8e-62
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 9e-62
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 1e-61
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 1e-61
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-61
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 2e-60
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 4e-59
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 9e-10
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 1e-09
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 2e-09
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 2e-09
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 2e-09
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-09
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 2e-09
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-09
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 2e-09
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 2e-09
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 2e-09
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-09
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 5e-06
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 8e-06
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 8e-06
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 9e-06
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 3e-04
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  261 bits (666), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 142/302 (47%), Positives = 193/302 (63%), Gaps = 7/302 (2%)
Query: 23  LSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKN 82
           L   +Y+ +CP  E+ V  AV  A  N+  +   L+RMHFHDCF+RGCDASVLL+S   N
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 83  TAEKDG-PPNISLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPK 141
           TAEKD  P N SL  F VI  AK AVEA CP  VSCADILA +ARD+  L+G  T+ VP 
Sbjct: 62  TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121
Query: 142 GRKDGRISKATDTR-QLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQN 200
           GR+DG +S A++   Q+P+P FN +QL  SF+ + L+  ++V LSG HS+G +HCSSF N
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTN 181
Query: 201 RIHNFNATLDIDPSISPSFATSLRHVCPAHN-KVKNAGATLDSST-TVFDNAYYKLLLQG 258
           R++NFN+   IDP++SPS+A  LR+ CPA++ +      +LD  T +V DN YY  +   
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241
Query: 259 KSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSI---TGGGQEIRLDCRR 315
             L +SDQ+L+T     A V   A + +A+ + F Q+M++M  I   TG   EIR +C  
Sbjct: 242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSV 301
Query: 316 VN 317
           VN
Sbjct: 302 VN 303
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-166
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-163
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-162
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-162
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-161
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-161
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-157
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 3e-77
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-67
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 3e-65
2e39_A344 Peroxidase; heme protein, coordination geometry of 2e-62
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 3e-62
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 5e-60
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 8e-59
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 9e-19
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  463 bits (1193), Expect = e-166
 Identities = 142/302 (47%), Positives = 192/302 (63%), Gaps = 7/302 (2%)

Query: 23  LSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKN 82
           L   +Y+ +CP  E+ V  AV  A  N+  +   L+RMHFHDCF+RGCDASVLL+S   N
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61

Query: 83  TAEKDGPPNI-SLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPK 141
           TAEKD  PN  SL  F VI  AK AVEA CP  VSCADILA +ARD+  L+G  T+ VP 
Sbjct: 62  TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121

Query: 142 GRKDGRISKATDT-RQLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQN 200
           GR+DG +S A++   Q+P+P FN +QL  SF+ + L+  ++V LSG HS+G +HCSSF N
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTN 181

Query: 201 RIHNFNATLDIDPSISPSFATSLRHVCPAH-NKVKNAGATLDSST-TVFDNAYYKLLLQG 258
           R++NFN+   IDP++SPS+A  LR+ CPA+  +      +LD  T +V DN YY  +   
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241

Query: 259 KSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSI---TGGGQEIRLDCRR 315
             L +SDQ+L+T     A V   A + +A+ + F Q+M++M  I   TG   EIR +C  
Sbjct: 242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSV 301

Query: 316 VN 317
           VN
Sbjct: 302 VN 303
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query317
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=3.2e-110  Score=790.13  Aligned_cols=295  Identities=47%  Similarity=0.784  Sum_probs=285.9

Q ss_pred             CCccccccCCccHHHHHHHHHHHHHHcCCCcchhhHHhhhccccccCCCceEeecCCCCCCCCCCCCCCC-CcchhhhHH
Q 021118           23 LSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNTAEKDGPPNI-SLHAFYVID  101 (317)
Q Consensus        23 l~~~fY~~sCp~~e~iVr~~v~~~~~~~~~~a~~lLRL~FHDcfv~GcDaSill~~~~~~~~E~~~~~N~-~L~g~~~I~  101 (317)
                      |+++||++|||++|+|||+.|++++.+||+++|+|||||||||||+||||||||++++++.+||++++|. +||||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999988888999999999 899999999


Q ss_pred             HHHHHHHhhCCCCccHHHHHHHhhhhHhhhcCCCCcccCCCCCCCCCCCcccC-CCCCCCCCCHHHHHHHHHHcCCChhh
Q 021118          102 NAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDT-RQLPAPTFNISQLQQSFSQRGLSMAD  180 (317)
Q Consensus       102 ~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gl~~~d  180 (317)
                      +||++||+.||++||||||||||||+||+++|||.|+|++||||++++.+.++ .+||+|+.++++|++.|++|||+.+|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999998877 78999999999999999999999999


Q ss_pred             hhhhhcCccccccccCCcccccccCCCCCCCCCCCCHHHHHHHhhhCCCCCC--CCCCCccCCCCccccChHHHHHhhcC
Q 021118          181 LVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAHNK--VKNAGATLDSSTTVFDNAYYKLLLQG  258 (317)
Q Consensus       181 lVaLsGaHTiG~~hc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~D~~tp~~FDN~Yy~~l~~~  258 (317)
                      |||||||||||++||.+|.+|||||+|++.+||+||+.|++.||..||.+..  .++.++||+.||.+|||+||+||+.+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~  241 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT  241 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHhC
Confidence            9999999999999999999999999999889999999999999999996332  33688999999999999999999999


Q ss_pred             ccccccccccccChhHHHHHHHHhhChHHHHHHHHHHHHHhHcc---CCCCCccccCCccCC
Q 021118          259 KSLFSSDQSLLTTPKTKALVSKFARSKSAFENAFVQSMIRMSSI---TGGGQEIRLDCRRVN  317 (317)
Q Consensus       259 ~gll~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~l---tg~~GeiR~~C~~~n  317 (317)
                      +|||+|||+|+.|++|+++|++||.|++.|+++|++||+||++|   ||.+||||++|+++|
T Consensus       242 ~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             CCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            99999999999999999999999999999999999999999999   999999999999998
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 317
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-112
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-111
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-108
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-105
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-102
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-100
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 8e-62
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 9e-58
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 1e-55
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 2e-42
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 7e-40
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 3e-39
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  324 bits (831), Expect = e-112
 Identities = 130/302 (43%), Positives = 181/302 (59%), Gaps = 7/302 (2%)

Query: 23  LSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKN 82
           L+  +Y +TCP L   V   +  A   D  + A+L+R+HFHDCF++GCD SVLL +    
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 83  TAEKDGPPNI-SLHAFYVIDNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPK 141
            +E+D  PNI S+    V+++ K AVE  CP  VSCADILA++A  A  L GGP W VP 
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 142 GRKDGRISKATDTR-QLPAPTFNISQLQQSFSQRGLSMADLVALSGGHSLGFSHCSSFQN 200
           GR+D   +  T     LPAP FN++QL+ SF+ +GL+  DLV LSGGH+ G + CS+F N
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN 181

Query: 201 RIHNFNATLDIDPSISPSFATSLRHVCPAHNKVKNAGATLDSSTTVFDNAYYKLLLQGKS 260
           R++NF+ T + DP+++ ++   LR  CP +    N      S+   FDN YY  LLQ   
Sbjct: 182 RLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNG 241

Query: 261 LFSSDQSLLTTP--KTKALVSKFARSKSAFENAFVQSMIRMSSI---TGGGQEIRLDCRR 315
           L  SDQ L +TP   T  +V+ F+ +++ F + F  SMI+M +I   TG   EIRL C  
Sbjct: 242 LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNF 301

Query: 316 VN 317
           VN
Sbjct: 302 VN 303
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query317
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.97
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=3.1e-104  Score=749.32  Aligned_cols=295  Identities=44%  Similarity=0.754  Sum_probs=284.7

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHHcCCCcchhhHHhhhccccccCCCceEeecCCCCCCCCCCCCCCCC-cchhhhH
Q 021118           22 ALSSNYYSKTCPKLETAVTNAVKKAMKNDKTVPAALLRMHFHDCFIRGCDASVLLESKGKNTAEKDGPPNIS-LHAFYVI  100 (317)
Q Consensus        22 ~l~~~fY~~sCp~~e~iVr~~v~~~~~~~~~~a~~lLRL~FHDcfv~GcDaSill~~~~~~~~E~~~~~N~~-L~g~~~I  100 (317)
                      ||+.+||++|||++|+|||++|++.+.+||+++|+||||+||||||+||||||||++++++.+|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999999888889999999986 5999999


Q ss_pred             HHHHHHHHhhCCCCccHHHHHHHhhhhHhhhcCCCCcccCCCCCCCCCCCcccC-CCCCCCCCCHHHHHHHHHHcCCChh
Q 021118          101 DNAKKAVEAMCPGVVSCADILALSARDAVALSGGPTWDVPKGRKDGRISKATDT-RQLPAPTFNISQLQQSFSQRGLSMA  179 (317)
Q Consensus       101 ~~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gl~~~  179 (317)
                      |.||++||+.||++||||||||||||+||+++|||.|+|++||+|+++|+..++ .+||.|+.++++|+..|++|||+.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999999999999999999999999999999988777 7899999999999999999999999


Q ss_pred             hhhhhhcCccccccccCCcccccccCCCCCCCCCCCCHHHHHHHhhhCCCC-CCCCCCCccCCCCccccChHHHHHhhcC
Q 021118          180 DLVALSGGHSLGFSHCSSFQNRIHNFNATLDIDPSISPSFATSLRHVCPAH-NKVKNAGATLDSSTTVFDNAYYKLLLQG  258 (317)
Q Consensus       180 dlVaLsGaHTiG~~hc~~f~~Rl~nf~g~~~~dp~~d~~~~~~L~~~Cp~~-~~~~~~~~~D~~tp~~FDN~Yy~~l~~~  258 (317)
                      ||||||||||||++||.+|.+|+|+|.+++.+||++++.|+..|+..||.+ ... +.+.+|..||.+|||+||++++.+
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~-~~~~~d~~tp~~fDn~Yy~~l~~~  239 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGD-NLTNLDLSTPDQFDNRYYSNLLQL  239 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSC-CEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCC-cccccCCCCCCccccHHHHHHhhc
Confidence            999999999999999999999999999998999999999999999999953 333 577899999999999999999999


Q ss_pred             ccccccccccccCh--hHHHHHHHHhhChHHHHHHHHHHHHHhHcc---CCCCCccccCCccCC
Q 021118          259 KSLFSSDQSLLTTP--KTKALVSKFARSKSAFENAFVQSMIRMSSI---TGGGQEIRLDCRRVN  317 (317)
Q Consensus       259 ~gll~SD~~L~~d~--~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~l---tg~~GeiR~~C~~~n  317 (317)
                      +|+|+|||+|+.|+  +|+++|++||.|+++|+++|++||+||++|   ||.+||||++|+++|
T Consensus       240 ~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         240 NGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             CCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             CcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            99999999999997  699999999999999999999999999999   999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure