Citrus Sinensis ID: 021149

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
Protein Sequence
MELPIKTFLCQNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQTSH
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEEcccHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEcccHHHHHHHHHccccHHcccEEEEEEccccccccccHHHHHHHHHHHcccccccccccccccccccEEEEcccccccEEEEEccccccccccccccccccEEEEEEccccHHHHHHHHHHHcccccccccccccccccccccccccEEEEEcEEEEEccccccccccccccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHccccEcccccccccccEEEEEEEEccccEEEEEEEcccccccccccccccccHHHHHHHcHHccHHHHHHHHHHHHHHHHccccccccccHcccccccccEEEEEcHEEEEccccccccccccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
melpiktflcqnnqrppmNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFakrflhpdivAEYNYIFlwdedigvenfnprrylsivkdegleisqpaldpvksevhhpitarrrnsKAHRRMYkykgsgrcddystappcigwvemMAPVFSRAAWRCAWYMIQNDLIHAWGLdiqlgycaqgdrtknvgvvdseyivhlglptlgvttepelntvgqasddleqianpvalapsqsrrydnrpevrrQSYIEMQIFRNRWKhaveddkcwvdpygqstnqtsh
Flexible Loop (DISEMBL)
MELPIKTFlcqnnqrpPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEIsqpaldpvksevhhpitarrrnskahrrmykykgsgrcddysTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPvalapsqsrrydnrpevrrqsYIEMQIFRNRWKHAVEDDKCWvdpygqstnqtsh
Low Complexity Region (SEG)
MELPIKTFLCQNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQTSH
Disordered region (IsUnstruct)
******TFLCQNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLE******************************YKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTE***************************************SYIEMQIFRNRWKHAVEDDKCWVDPY*********
Disordered Region (DISOPRED)
***PI**************LLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLP****************************************PEVRRQSYIEMQIFRNRWKHAVEDDKCWV************
Disordered Region (DISEMBL)
MELPIKTFLCQNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS*****************RMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYG********
Disordered Region (DISPRO)
**************RPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTL*************************************RPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYG********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MELPIKTFLCQNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQTSH
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
359486223	413	PREDICTED: uncharacterized protein LOC10	0.930	0.711	0.735	1e-130
240255999	389	uncharacterized protein [Arabidopsis tha	0.892	0.724	0.727	1e-126
255575938	370	conserved hypothetical protein [Ricinus	0.854	0.729	0.688	1e-120
356560121	385	PREDICTED: uncharacterized protein LOC10	0.879	0.722	0.696	1e-120
357445211	406	hypothetical protein MTR_2g005330 [Medic	0.886	0.689	0.669	1e-120
356541848	387	PREDICTED: uncharacterized protein LOC10	0.886	0.723	0.703	1e-120
449462816	414	PREDICTED: uncharacterized protein LOC10	0.933	0.712	0.641	1e-116
449515369	402	PREDICTED: uncharacterized LOC101205845,	0.933	0.733	0.641	1e-116
224120054	314	predicted protein [Populus trichocarpa]	0.927	0.933	0.681	1e-116
359476620	466	PREDICTED: uncharacterized protein LOC10	0.939	0.637	0.659	1e-115

>gi|359486223|ref|XP_002265374.2| PREDICTED: uncharacterized protein LOC100255698 [Vitis vinifera] gi|297739491|emb|CBI29673.3| unnamed protein product [Vitis vinifera]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/295 (73%), Positives = 250/295 (84%), Gaps = 1/295 (0%)

Query: 16  PPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAAN 75
           P  +LLA+A GIKQK+IV+QIV KF   +FVVMLFHYDGVVDEW++  W+D AIHV+  N
Sbjct: 112 PSKSLLAMAVGIKQKEIVNQIVEKFILSNFVVMLFHYDGVVDEWREFAWSDHAIHVTVVN 171

Query: 76  QTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS 135
           QTKWWFAKRFLHPDIVAEYNYIFLWDED+GVENF+P RY+SIV+DEGLEISQPALDP KS
Sbjct: 172 QTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVENFHPGRYVSIVEDEGLEISQPALDPKKS 231

Query: 136 EVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMI 195
            VHH ITAR RNS+ HRR YK++GSGRCDD STAPPC+GWVEMMAPVFS+AAWRC W+MI
Sbjct: 232 RVHHQITARVRNSRVHRRTYKHRGSGRCDDQSTAPPCVGWVEMMAPVFSKAAWRCVWHMI 291

Query: 196 QNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDL 255
           QN+LIHAWG+D+QLGYCAQGDRTKNVGVVDSEY+VHL LPTLGV  E EL   G     L
Sbjct: 292 QNELIHAWGVDMQLGYCAQGDRTKNVGVVDSEYVVHLALPTLGVLDENELRGEGHDHSSL 351

Query: 256 -EQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQ 309
            E++   VALA S+  + DNR  VRRQS+IEMQIFR+RW +AV++DKCW+DPY Q
Sbjct: 352 REKLPKSVALAQSEFHKVDNRSAVRRQSFIEMQIFRSRWANAVKEDKCWIDPYAQ 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240255999|ref|NP_193588.5| uncharacterized protein [Arabidopsis thaliana] gi|332658658|gb|AEE84058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 211/290 (72%), Positives = 240/290 (82%), Gaps = 8/290 (2%)

Query: 18  MNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQT 77
           M+LLA+A GIKQK++V+++++KFP +DF VMLFHYDGVVD+WK   W + AIHVS  NQT
Sbjct: 108 MSLLAMAVGIKQKELVNKVIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQT 167

Query: 78  KWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEV 137
           KWWFAKRFLHPDIVAEY YIFLWDED+GV +FNP+RYLSIVK+EGLEISQPALD  KSEV
Sbjct: 168 KWWFAKRFLHPDIVAEYEYIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEV 227

Query: 138 HHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQN 197
           HHPITARR+ SK HRRMYKYKGSGRCDD+ST PPCIGWVEMMAPVFSRAAWRC+WYMIQN
Sbjct: 228 HHPITARRKKSKVHRRMYKYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQN 287

Query: 198 DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQ 257
           DLIHAWGLD QLGYCAQGDR KNVGVVD+EYI+H GLPTLGV        V  AS  L  
Sbjct: 288 DLIHAWGLDTQLGYCAQGDRKKNVGVVDAEYIIHYGLPTLGV--------VETASSALRN 339

Query: 258 IANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPY 307
             +  +    +SR  DNRPEVR +S++EM+ F+ RWK AV DD CWVDPY
Sbjct: 340 ETDSKSTESLESREVDNRPEVRMKSFVEMKRFKERWKKAVRDDTCWVDPY 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575938|ref|XP_002528866.1| conserved hypothetical protein [Ricinus communis] gi|223531717|gb|EEF33540.1| conserved hypothetical protein [Ricinus communis]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/305 (68%), Positives = 239/305 (78%), Gaps = 35/305 (11%)

Query: 12  NNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHV 71
           N Q+   +LLA+A GI QK +VDQIV+KFP  DFVVMLFHYDGVVD+W+DL W+D AIHV
Sbjct: 101 NKQKLSKSLLALAVGINQKVVVDQIVKKFPLSDFVVMLFHYDGVVDKWRDLPWSDHAIHV 160

Query: 72  SAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD 131
           SA NQTKWWFAKRFLHPDIV+EY+Y+FLWDED+GVENFNP+RYLSI++DEGLEISQPALD
Sbjct: 161 SAVNQTKWWFAKRFLHPDIVSEYDYLFLWDEDLGVENFNPKRYLSIIRDEGLEISQPALD 220

Query: 132 PVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCA 191
           P KS V+HPITAR+  S  HRR+YK+KGSGRC   ST+PPCIGWVEMMAPVFS AAWRCA
Sbjct: 221 PTKSAVYHPITARQPKSTVHRRIYKFKGSGRCYGNSTSPPCIGWVEMMAPVFSTAAWRCA 280

Query: 192 WYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQA 251
           W+MIQNDLIHAWGLD QLGYCAQGDRTKNVGVVDSEYIVHLGL TLGV            
Sbjct: 281 WHMIQNDLIHAWGLDFQLGYCAQGDRTKNVGVVDSEYIVHLGLLTLGVF----------- 329

Query: 252 SDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQST 311
                                 N  EVR+QS +EMQIF +RWK+A ++DKCWVDP+ Q  
Sbjct: 330 ----------------------NGTEVRKQSSVEMQIFLDRWKNAAKEDKCWVDPFQQ-- 365

Query: 312 NQTSH 316
           NQTS+
Sbjct: 366 NQTSN 370

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560121|ref|XP_003548344.1| PREDICTED: uncharacterized protein LOC100797710 [Glycine max]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 209/300 (69%), Positives = 236/300 (78%), Gaps = 22/300 (7%)

Query: 17  PMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQ 76
           P+NLLA+A G++QK+IV++IV KF S DFVVMLFHYDG VD WK L W+ RAIHVSA NQ
Sbjct: 108 PLNLLAMAVGLEQKEIVNKIVEKFLSSDFVVMLFHYDGFVDGWKSLAWSSRAIHVSAINQ 167

Query: 77  TKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSE 136
           TKWWFAKRFLHPDIV EYNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPALDP KSE
Sbjct: 168 TKWWFAKRFLHPDIVVEYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPTKSE 227

Query: 137 VHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQ 196
           VHHP+T  +  SK HRR YK KGSGRCDD STAPPCIGWVEMMAPVFS+ +W+C W++IQ
Sbjct: 228 VHHPLTVHKAGSKVHRRYYKLKGSGRCDDKSTAPPCIGWVEMMAPVFSKKSWQCVWHLIQ 287

Query: 197 NDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLE 256
           NDLIHAWGLD QLGYCAQGDR +NVGVVDSEYIVHLGLPTLG +   E            
Sbjct: 288 NDLIHAWGLDRQLGYCAQGDRMQNVGVVDSEYIVHLGLPTLGGSNGNE------------ 335

Query: 257 QIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQTSH 316
                   APS S   DNR +VR QSYIEMQ+F  RWK A E DKCW+DPY +  N+T H
Sbjct: 336 --------APSGSSG-DNRAKVRMQSYIEMQVFGKRWKDAAEKDKCWIDPY-EKANKTGH 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445211|ref|XP_003592883.1| hypothetical protein MTR_2g005330 [Medicago truncatula] gi|355481931|gb|AES63134.1| hypothetical protein MTR_2g005330 [Medicago truncatula]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/315 (66%), Positives = 243/315 (77%), Gaps = 35/315 (11%)

Query: 17  PMNLLAIAAGIKQKKIVDQIVRKF-------------PSKDFVVMLFHYDGVVDEWKDLV 63
           P+NLLAI+ G+KQK++VD+IV+KF             PS DFVVMLFHYDG VD WK+L 
Sbjct: 112 PLNLLAISVGVKQKEVVDKIVKKFKLISADLYRWWQFPSSDFVVMLFHYDGFVDGWKNLA 171

Query: 64  WADRAIHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGL 123
           W++RAIHVSA NQTKWWFAKRFLHPDIVA+YNYIFLWDED+ V+NF+P+RYLSIVK+EGL
Sbjct: 172 WSNRAIHVSAINQTKWWFAKRFLHPDIVADYNYIFLWDEDLLVDNFDPKRYLSIVKEEGL 231

Query: 124 EISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVF 183
           EISQPALDP KSE+HHP+T  +  SK HRR YK+KGSGRCDD STAPPC+GWVEMMAPVF
Sbjct: 232 EISQPALDPGKSEIHHPLTVHKAGSKVHRRYYKFKGSGRCDDNSTAPPCLGWVEMMAPVF 291

Query: 184 SRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEP 243
           S+ +W+C W+MIQNDLIHAWGLD QLGYCAQGDR KNVGVVDSEYIVHLGLPTLG +   
Sbjct: 292 SKKSWQCVWHMIQNDLIHAWGLDRQLGYCAQGDRMKNVGVVDSEYIVHLGLPTLGGSNGN 351

Query: 244 ELNTVGQASDDLEQIANPVALAPSQSRRYD-NRPEVRRQSYIEMQIFRNRWKHAVEDDKC 302
           E                      S S R D +RP+VR QSYIEMQ+F  RWK A + D+C
Sbjct: 352 E--------------------GSSNSHRDDSDRPKVRMQSYIEMQVFGKRWKDAAKKDQC 391

Query: 303 WVDPY-GQSTNQTSH 316
           W+DPY  Q  NQTSH
Sbjct: 392 WIDPYEQQQANQTSH 406

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541848|ref|XP_003539384.1| PREDICTED: uncharacterized protein LOC100526994 [Glycine max]

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/300 (70%), Positives = 238/300 (79%), Gaps = 20/300 (6%)

Query: 17  PMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQ 76
           P+NLLA+A G+KQK+IV++IV KF S  FVVMLFHYDG VD WK L W+  AIHVSA NQ
Sbjct: 108 PLNLLAMAVGLKQKEIVNKIVEKFLSSGFVVMLFHYDGFVDGWKSLAWSSCAIHVSAINQ 167

Query: 77  TKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSE 136
           TKWWFAKRFLHPDIVAEYNYIFLWDED+ V+NF+P+RYLSIVK+EGLEISQPALDP KSE
Sbjct: 168 TKWWFAKRFLHPDIVAEYNYIFLWDEDLLVDNFDPKRYLSIVKEEGLEISQPALDPTKSE 227

Query: 137 VHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQ 196
           VHHP+T  +  SK HRR YK KGSGRCDD STAPPCIGWVEMMAPVFS+ +W+C W++IQ
Sbjct: 228 VHHPLTVHKAVSKVHRRYYKLKGSGRCDDKSTAPPCIGWVEMMAPVFSKKSWQCVWHLIQ 287

Query: 197 NDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLE 256
           NDLIHAWGLD QLGYCAQGDR +NVGVVDSEYIVHLGLPTLG +   E+           
Sbjct: 288 NDLIHAWGLDRQLGYCAQGDRMRNVGVVDSEYIVHLGLPTLGGSNGNEVQ---------- 337

Query: 257 QIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQTSH 316
                   APS S   DNR +VR QSYIEMQ+F  RWK A E DKCW+DPY Q+ N+TSH
Sbjct: 338 --------APSDSPG-DNRAKVRMQSYIEMQVFGKRWKDAAEKDKCWIDPYEQA-NKTSH 387

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462816|ref|XP_004149136.1| PREDICTED: uncharacterized protein LOC101205845 [Cucumis sativus]

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/312 (64%), Positives = 240/312 (76%), Gaps = 17/312 (5%)

Query: 13  NQRPPM--NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIH 70
           N++P +  NLLAIA GIKQ+ +V +I+ KFP  DF V+LFHYDGVVDEW++  W  RA+H
Sbjct: 34  NKKPKVSKNLLAIAVGIKQRHVVSKIIEKFPQDDFDVILFHYDGVVDEWREFAWYSRALH 93

Query: 71  VSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPAL 130
           VSA NQTKWWFAKRFLHPDIVAEYNYIFLWDED+GV+ F+P+RY+SI+K+EGLEISQPAL
Sbjct: 94  VSALNQTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVDYFDPKRYISILKEEGLEISQPAL 153

Query: 131 DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRC 190
           DPVKS+VH P+TAR+  SK HRR Y +KG+GRC   ST PPC GWVEMMAPVFSRA WRC
Sbjct: 154 DPVKSKVHQPLTARKTGSKVHRRFYNFKGAGRCYANSTGPPCTGWVEMMAPVFSRAGWRC 213

Query: 191 AWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQ 250
            WYMIQNDLIHAWGLD QLGYCAQGDRTK VGVVD+EYIVHLGLPTLG + +  L+   +
Sbjct: 214 TWYMIQNDLIHAWGLDRQLGYCAQGDRTKKVGVVDAEYIVHLGLPTLGASHDNALSFSIK 273

Query: 251 ASD---------DLEQIANPVALAPSQSR------RYDNRPEVRRQSYIEMQIFRNRWKH 295
            S            EQ+ +  AL    S       + +NR +VR QS +EMQIF++RW  
Sbjct: 274 LSSVYYGTKLTFPSEQLNSDAALKKDSSNLDRSEPQVNNRVKVRMQSSLEMQIFKDRWTD 333

Query: 296 AVEDDKCWVDPY 307
           A ++D+CW+DPY
Sbjct: 334 AAKNDRCWIDPY 345

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515369|ref|XP_004164722.1| PREDICTED: uncharacterized LOC101205845, partial [Cucumis sativus]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/312 (64%), Positives = 240/312 (76%), Gaps = 17/312 (5%)

Query: 13  NQRPPM--NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIH 70
           N++P +  NLLAIA GIKQ+ +V +I+ KFP  DF V+LFHYDGVVDEW++  W  RA+H
Sbjct: 90  NKKPKVSKNLLAIAVGIKQRHVVSKIIEKFPQDDFDVILFHYDGVVDEWREFAWYSRALH 149

Query: 71  VSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPAL 130
           VSA NQTKWWFAKRFLHPDIVAEYNYIFLWDED+GV+ F+P+RY+SI+K+EGLEISQPAL
Sbjct: 150 VSALNQTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVDYFDPKRYISILKEEGLEISQPAL 209

Query: 131 DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRC 190
           DPVKS+VH P+TAR+  SK HRR Y +KG+GRC   ST PPC GWVEMMAPVFSRA WRC
Sbjct: 210 DPVKSKVHQPLTARKTGSKVHRRFYNFKGAGRCYANSTGPPCTGWVEMMAPVFSRAGWRC 269

Query: 191 AWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQ 250
            WYMIQNDLIHAWGLD QLGYCAQGDRTK VGVVD+EYIVHLGLPTLG + +  L+   +
Sbjct: 270 TWYMIQNDLIHAWGLDRQLGYCAQGDRTKKVGVVDAEYIVHLGLPTLGASHDNALSFSIK 329

Query: 251 ASDDL---------EQIANPVALAPSQSR------RYDNRPEVRRQSYIEMQIFRNRWKH 295
            S            EQ+ +  AL    S       + +NR +VR QS +EMQIF++RW  
Sbjct: 330 LSSVYYGTKLTFPSEQLNSDAALKKDSSNLDRSEPQVNNRVKVRMQSSLEMQIFKDRWTD 389

Query: 296 AVEDDKCWVDPY 307
           A ++D+CW+DPY
Sbjct: 390 AAKNDRCWIDPY 401

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120054|ref|XP_002331125.1| predicted protein [Populus trichocarpa] gi|222872853|gb|EEF09984.1| predicted protein [Populus trichocarpa]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/298 (68%), Positives = 236/298 (79%), Gaps = 5/298 (1%)

Query: 9   LCQNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRA 68
           L  +N +P  +LLAIA GIKQK+IVD+IV KFP  DFVVMLFHYDGVVD+W+DL W+D A
Sbjct: 22  LNDDNPQPSASLLAIAVGIKQKEIVDRIVTKFPLSDFVVMLFHYDGVVDKWRDLSWSDSA 81

Query: 69  IHVSAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQP 128
           IHVSA NQTKWWFAKRFLHPDIVAEYNYIFLWDED+GVENFNPRRYLSIVK+EGLE+SQP
Sbjct: 82  IHVSAVNQTKWWFAKRFLHPDIVAEYNYIFLWDEDLGVENFNPRRYLSIVKEEGLEVSQP 141

Query: 129 ALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAW 188
           ALDP +S +H+PIT+R RNS+AHR++ K KG+GRC + ST PPC GWVEMMAPVFS+AAW
Sbjct: 142 ALDPARSTIHNPITSRTRNSRAHRKILKLKGNGRCYNNSTLPPCTGWVEMMAPVFSKAAW 201

Query: 189 RCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTV 248
           RC WYMIQNDLIHAWGLD +LG+CAQGD TKNVGVVD+EY+VHLGL TLGV    E +  
Sbjct: 202 RCTWYMIQNDLIHAWGLDRKLGHCAQGDWTKNVGVVDAEYVVHLGLSTLGVFNGSEASIS 261

Query: 249 GQASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDP 306
               D +      V +       +     VR QSY+EM IF  RW+ AV +D+CWVDP
Sbjct: 262 YIPYDSI-----IVGVRCYNCSFFLLVLFVRTQSYVEMNIFHKRWEDAVNEDRCWVDP 314

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476620|ref|XP_002272495.2| PREDICTED: uncharacterized protein LOC100244499 [Vitis vinifera]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/308 (65%), Positives = 236/308 (76%), Gaps = 11/308 (3%)

Query: 19  NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTK 78
           NLLA+A G+KQK +V+++V KF S  FVVMLFHYDGVVDEWKD  W DR +HV+A NQTK
Sbjct: 160 NLLAVAVGVKQKDLVNKMVEKFLSYGFVVMLFHYDGVVDEWKDFKWCDRVLHVAAINQTK 219

Query: 79  WWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVH 138
           WWFAKRFLHP+IVAEYNYIFLWDED+GV +FNPRRY++ V+ EGLEISQPALD  KSEVH
Sbjct: 220 WWFAKRFLHPEIVAEYNYIFLWDEDLGVTDFNPRRYVATVQREGLEISQPALDGSKSEVH 279

Query: 139 HPITARRRNSKAHRRMYKYKGSGR-CDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQN 197
           H IT R R S  HRR++K  GSG+ CD+ STAPPC GW+E+MAPVFSR AWRC WYMIQN
Sbjct: 280 HQITLRGRRSDVHRRIFKSSGSGKICDENSTAPPCTGWIEVMAPVFSREAWRCVWYMIQN 339

Query: 198 DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLE- 256
           DLIHAWGLD+QLGYCAQGDRTKNVGVVDS+YIVH GLPTLG   +P+  T     DD E 
Sbjct: 340 DLIHAWGLDMQLGYCAQGDRTKNVGVVDSDYIVHYGLPTLG-ANDPDKTTPPVQDDDSEP 398

Query: 257 -------QIANPVALAPSQSRRYDN-RPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYG 308
                      P++  P+ S    N R EVRRQSYIE  IF+ RW+ AV++DKCW DPY 
Sbjct: 399 EKITTTTTAETPISKLPASSTSPINFRVEVRRQSYIEYNIFKKRWRQAVKEDKCWKDPYQ 458

Query: 309 QSTNQTSH 316
           Q   + +H
Sbjct: 459 QFGEKNTH 466

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
TAIR|locus:2124608	389	AT4G18530 "AT4G18530" [Arabido	0.905	0.735	0.719	1.3e-118
TAIR|locus:2202124	438	AT1G11170 [Arabidopsis thalian	0.892	0.643	0.569	4.5e-91
TAIR|locus:2008425	425	AT1G61240 [Arabidopsis thalian	0.901	0.670	0.559	4.6e-89
TAIR|locus:2031905	401	AT1G13000 [Arabidopsis thalian	0.718	0.566	0.523	3.7e-64
TAIR|locus:2086721	398	AT3G27470 "AT3G27470" [Arabido	0.693	0.550	0.515	3.3e-63
TAIR|locus:504956279	381	AT1G24570 [Arabidopsis thalian	0.693	0.574	0.497	2.6e-61
TAIR|locus:2205140	382	AT1G08040 [Arabidopsis thalian	0.712	0.589	0.502	7.1e-61
TAIR|locus:2079291	396	AT3G26440 [Arabidopsis thalian	0.683	0.545	0.518	7.1e-61
TAIR|locus:2008640	404	AT1G67850 "AT1G67850" [Arabido	0.683	0.534	0.513	5e-60
TAIR|locus:2057557	374	AT2G28310 "AT2G28310" [Arabido	0.693	0.585	0.497	6.4e-60

TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]

 Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
 Identities = 213/296 (71%), Positives = 243/296 (82%)

Query:    14 QRP--PMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHV 71
             +RP   M+LLA+A GIKQK++V+++++KFP +DF VMLFHYDGVVD+WK   W + AIHV
Sbjct:   102 RRPNHSMSLLAMAVGIKQKELVNKVIQKFPPRDFAVMLFHYDGVVDDWKQYPWNNHAIHV 161

Query:    72 SAANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD 131
             S  NQTKWWFAKRFLHPDIVAEY YIFLWDED+GV +FNP+RYLSIVK+EGLEISQPALD
Sbjct:   162 SVMNQTKWWFAKRFLHPDIVAEYEYIFLWDEDLGVGHFNPQRYLSIVKEEGLEISQPALD 221

Query:   132 PVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCA 191
               KSEVHHPITARR+ SK HRRMYKYKGSGRCDD+ST PPCIGWVEMMAPVFSRAAWRC+
Sbjct:   222 TSKSEVHHPITARRKKSKVHRRMYKYKGSGRCDDHSTNPPCIGWVEMMAPVFSRAAWRCS 281

Query:   192 WYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQA 251
             WYMIQNDLIHAWGLD QLGYCAQGDR KNVGVVD+EYI+H GLPTLGV        V  A
Sbjct:   282 WYMIQNDLIHAWGLDTQLGYCAQGDRKKNVGVVDAEYIIHYGLPTLGV--------VETA 333

Query:   252 SDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPY 307
             S  L    +  +    +SR  DNRPEVR +S++EM+ F+ RWK AV DD CWVDPY
Sbjct:   334 SSALRNETDSKSTESLESREVDNRPEVRMKSFVEMKRFKERWKKAVRDDTCWVDPY 389

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]

 Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
 Identities = 167/293 (56%), Positives = 211/293 (72%)

Query:    19 NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTK 78
             NLLAI  G+KQK  VD +V+KF   +F ++LFHYDG +D+W DL W+ ++IH+ A NQTK
Sbjct:   118 NLLAIPVGLKQKGNVDALVKKFLPANFTIVLFHYDGNMDKWWDLEWSSKSIHIVAQNQTK 177

Query:    79 WWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVH 138
             WWFAKRFLHPD+V+ Y+YIFLWDED+GVENFNP RYL IVK  GLEISQPALD   +E+H
Sbjct:   178 WWFAKRFLHPDVVSIYDYIFLWDEDLGVENFNPERYLKIVKSVGLEISQPALDHNSTEIH 237

Query:   139 HPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQND 198
             H IT R +  K HRR+Y  +G  RC + S+ PPC G+VE MAPVFS+AAW C W +IQND
Sbjct:   238 HKITLRSKTKKFHRRVYINRGHKRCSNTSSDPPCTGFVEGMAPVFSKAAWLCTWNLIQND 297

Query:   199 LIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQI 258
             L+H WG+D++LGYCAQGDRTKNVG+VDSEYI+H G+ TLG +  PE           ++ 
Sbjct:   298 LVHGWGMDMKLGYCAQGDRTKNVGIVDSEYILHQGIQTLGESV-PEK----------KKT 346

Query:   259 ANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQST 311
             A  V         +D+R E+RRQS  E+Q F+ RW  AVE+D  W+DP   S+
Sbjct:   347 ARDVGTRRQGHTTFDSRTEIRRQSTWELQTFKERWSKAVEEDIKWIDPSSSSS 399

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]

 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 165/295 (55%), Positives = 207/295 (70%)

Query:    19 NLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTK 78
             NLLA+  G+KQK  VD +V+KF   +F V+LFHYDG +D+W DL W+ +AIH+ A NQTK
Sbjct:   115 NLLAMPVGLKQKDNVDAVVKKFLPANFTVILFHYDGNMDQWWDLEWSSKAIHIVAHNQTK 174

Query:    79 WWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVH 138
             WWFAKRFLHPDIV+ Y+Y+FLWDED+GVENFNP++YL IVK  GLEISQPAL P  +EVH
Sbjct:   175 WWFAKRFLHPDIVSIYDYVFLWDEDLGVENFNPQKYLRIVKTAGLEISQPALHPNSTEVH 234

Query:   139 HPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQND 198
             H IT R R    HRR+Y  +G+ +C + S  PPC G+VE MAPVFSR+AW C W +IQND
Sbjct:   235 HRITVRSRTKIFHRRVYDSRGNMKCSNASEGPPCTGFVEGMAPVFSRSAWFCTWNLIQND 294

Query:   199 LIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDDLEQI 258
             L+H WG+D++LGYCAQGDR+K VG+VDSEYI H G+ TLG          G    D +  
Sbjct:   295 LVHGWGMDMKLGYCAQGDRSKKVGIVDSEYIFHQGIQTLG----------GSGYPDKKNS 344

Query:   259 ANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDDKCWVDPYGQSTNQ 313
             A         S  +D+R E+RRQS  E+Q F+ RW  AV +DK WV+    S N+
Sbjct:   345 ARSGVNRRRGSATFDSRTEIRRQSTWELQAFKERWNQAVAEDKYWVERSSPSRNR 399

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 122/233 (52%), Positives = 159/233 (68%)

Query:    17 PMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQ 76
             P  L+A   G  QK  VD  V+KF SKDF ++LFHYDG   EW++L W+ RAIHVS   Q
Sbjct:   139 PKYLIAFTVGFGQKVNVDACVKKF-SKDFTIVLFHYDGRTTEWEELEWSKRAIHVSVPKQ 197

Query:    77 TKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSE 136
             TKWW+AKRFLHPDIVA Y+Y+F+WDED+G+ENF+   Y+ ++K  GLEISQPA++  K +
Sbjct:   198 TKWWYAKRFLHPDIVAPYDYVFIWDEDLGLENFDVEEYIRLIKKHGLEISQPAVES-KKK 256

Query:   137 VHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQ 196
             +   IT R+   + H+   K K  GRC+D    PPC  ++E+MAPVFSR AWRC W+MIQ
Sbjct:   257 ITWEITKRKTKGEVHKDA-KEK-PGRCND-PHLPPCAAFIEIMAPVFSRDAWRCVWHMIQ 313

Query:   197 NDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVG 249
             NDL+H WGLD  L  C +    K +GVVDS++I+H  LP+LG   E +    G
Sbjct:   314 NDLVHGWGLDFALRKCVEPAHEK-IGVVDSQWIIHQSLPSLGSQGEAQDGKAG 365

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 116/225 (51%), Positives = 159/225 (70%)

Query:    20 LLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKW 79
             L+    G  Q+K +D +++KF S +F +MLFHYDG   EW++  W+ RAIHVS   QTKW
Sbjct:   134 LVTFTVGYDQRKNIDTVLKKF-SDNFSIMLFHYDGRASEWEEFEWSKRAIHVSIRKQTKW 192

Query:    80 WFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHH 139
             W+AKRFLHPDIVA Y YIF+WDED+GVE+F+  +YL++VK  GLEISQP L+P +  +  
Sbjct:   193 WYAKRFLHPDIVAPYEYIFIWDEDLGVEHFDSEKYLAVVKKHGLEISQPGLEPYEG-LTW 251

Query:   140 PITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDL 199
              +T +R +++ H+  +  + +G C D    PPC  +VE+MAPVFSR AWRC W+MIQNDL
Sbjct:   252 EMTKKRDDTEVHK--HAEERNGWCTD-PNLPPCAAFVEIMAPVFSRKAWRCVWHMIQNDL 308

Query:   200 IHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPE 244
             IH WGLD  +  C Q    K +GVVD+++I+H G+P+LG   +PE
Sbjct:   309 IHGWGLDFAVRKCVQNAHEK-IGVVDAQWIIHQGVPSLGNQGQPE 352

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]

 Score = 605 (218.0 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
 Identities = 112/225 (49%), Positives = 148/225 (65%)

Query:    15 RPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKD-LVWADRAIHVSA 73
             + P  L     G  Q+  +D  V KF S++F ++LFHYDGV   W D   W+  AIH+S 
Sbjct:   109 KQPRYLATFTVGYNQRHNIDACVSKF-SENFTIVLFHYDGVTSAWNDEFEWSRNAIHISV 167

Query:    74 ANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPV 133
               QTKWW+AKRFLHPDIVA Y+YIF+WDED+GV++FN   Y+ IVK   LEISQP LDP 
Sbjct:   168 KKQTKWWYAKRFLHPDIVARYDYIFIWDEDLGVDHFNAEEYIHIVKKHDLEISQPGLDP- 226

Query:   134 KSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWY 193
             ++  +  IT RR +S+ H+   +      C +    PPC  +VE+MAPVFSR AWRC W+
Sbjct:   227 ETGFNWQITKRREHSEVHKETDEKLDW--CSN-PPRPPCAAFVEIMAPVFSRDAWRCVWH 283

Query:   194 MIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             MIQNDL+H WGLD  L  C +    + +G+VDS++IVH  +P+LG
Sbjct:   284 MIQNDLVHGWGLDFALRRCVEEPAFEKIGIVDSQWIVHQFIPSLG 328

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 116/231 (50%), Positives = 154/231 (66%)

Query:    14 QRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSA 73
             ++ P  L+    G +Q+  ++  V+KF S+DF ++LFHYDG   EW    W+  AIH+SA
Sbjct:   119 KKKPKYLVTFTVGFEQRNNINAAVKKF-SEDFQILLFHYDGRTTEWDQFEWSKNAIHISA 177

Query:    74 ANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPV 133
               QTKWW+AKRFLHPD+V+ Y YIF+WDED+GVE+FN  RY+ +VK  GLEISQP L+P 
Sbjct:   178 KKQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADRYVELVKKHGLEISQPGLEP- 236

Query:   134 KSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWY 193
              + +   +T RR +   H+   K K  G C D    PPC  +VE+MAPVFSR AWRC W+
Sbjct:   237 NNGLTWEMTKRRGDRDVHKET-KEK-PGWCSD-PHLPPCAAFVEIMAPVFSREAWRCVWH 293

Query:   194 MIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPE 244
             MIQNDL+H WGLD  L  C +    K +GVVDS++I+H  +P+LG   E E
Sbjct:   294 MIQNDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWIIHQVIPSLGSQGESE 343

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 115/222 (51%), Positives = 152/222 (68%)

Query:    17 PMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQ 76
             P  L+A     +Q+K +D  V+KF S +F ++LFHYDG   E+ +  W+ RAIHVS   Q
Sbjct:   130 PKYLVAFTVSYEQRKNIDACVKKF-SDNFTIVLFHYDGKTSEYDEFEWSKRAIHVSVPKQ 188

Query:    77 TKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSE 136
             TKWW+AKRFLHPDI+A Y YIF+WDED+GVENF+   Y+ IV   GLEISQPA++  KS 
Sbjct:   189 TKWWYAKRFLHPDIIAPYEYIFIWDEDLGVENFDAEEYIKIVNKHGLEISQPAVESRKS- 247

Query:   137 VHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQ 196
             +   IT R    + H+ + +  G  RC+D    PPC G++E+MAPVFSR AWRC W+MIQ
Sbjct:   248 ITWKITKRIPGIEVHKEVEEKPG--RCND-PHLPPCAGFIEIMAPVFSREAWRCVWHMIQ 304

Query:   197 NDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             NDL+H WGLD  L  C +    K +GVVDS++I+H  +P+LG
Sbjct:   305 NDLVHGWGLDFALRKCVEPAHEK-IGVVDSQWIIHQKIPSLG 345

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 114/222 (51%), Positives = 149/222 (67%)

Query:    17 PMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQ 76
             P  L     GI QK  +D  V+KF S++F ++LFHYDG V EW +  W+  AIH+S   Q
Sbjct:   135 PRYLATFTVGINQKANIDACVKKF-SENFTIVLFHYDGRVTEWDEFEWSKTAIHISVRKQ 193

Query:    77 TKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSE 136
             TKWW+AKRFLHPDIVA Y+YIF+WDED+GVE+FN   Y+ +VK  GLEISQP L+P +  
Sbjct:   194 TKWWYAKRFLHPDIVARYDYIFVWDEDLGVEHFNAEEYVKMVKKHGLEISQPGLEPNQG- 252

Query:   137 VHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQ 196
             +   +T RR + + H+     +  G C D    PPC  +VE+MAPVFSR AWRC W++IQ
Sbjct:   253 LTWQMTKRRGDMEVHK--ITEERPGWCSD-PHLPPCAAFVEIMAPVFSRNAWRCVWHVIQ 309

Query:   197 NDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             NDL+H WGLD  L  C +    K +GVVDS+++VH   P+LG
Sbjct:   310 NDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWVVHQSFPSLG 350

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 112/225 (49%), Positives = 153/225 (68%)

Query:    14 QRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSA 73
             ++ P  L+    G +Q+  ++ +V+KF S+DF ++LFHYDG   EW    W+  AIH+S 
Sbjct:   112 KKKPKYLVTFTVGFEQRNHINGVVKKF-SEDFQILLFHYDGRTTEWDQFEWSKSAIHIST 170

Query:    74 ANQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPV 133
               QTKWW+AKRFLHPD+V+ Y YIF+WDED+GVE+FN  +Y+ +VK  GLEISQP L+P 
Sbjct:   171 RKQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADKYIELVKKHGLEISQPGLEP- 229

Query:   134 KSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWY 193
              + +   +T RR + + H+   K K  G C D    PPC  +VE+MAPVFSR AWRC W+
Sbjct:   230 NNGLTWEMTKRRGDREVHKDT-KEK-PGWCKD-PHLPPCAAFVEIMAPVFSREAWRCVWH 286

Query:   194 MIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLG 238
             MIQNDL+H WGLD  L  C +    K +GVVDS++I+H  +P+LG
Sbjct:   287 MIQNDLVHGWGLDFALRRCVEPAHEK-IGVVDSQWIIHKVIPSLG 330


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      316       316   0.00082  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  629 (67 KB)
  Total size of DFA:  268 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.64u 0.13s 23.77t   Elapsed:  00:00:01
  Total cpu time:  23.64u 0.13s 23.77t   Elapsed:  00:00:02
  Start:  Sat May 11 03:35:16 2013   End:  Sat May 11 03:35:18 2013

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: AT4G18530 unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 18 plant structures; EXPRESSED DURING- 10 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF707 (InterPro-IPR007877); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT4G12840.2); Has 173 Blast hits to 173 proteins in 12 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 4 (source- NCBI BLink). (389 aa) (Arabidopsis thaliana)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	316
pfam05212	294	pfam05212, DUF707, Protein of unknown function (DU	1e-127
COG5096	757	COG5096, COG5096, Vesicle coat complex, various su	0.003

>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707)

 Score =  365 bits (938), Expect = e-127
 Identities = 131/286 (45%), Positives = 165/286 (57%), Gaps = 30/286 (10%)

Query: 15  RPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAA 74
             P  LLA   G  QK  VD  V+KF S +F ++LFHYDG   EW +L W+ +AIHVSA 
Sbjct: 39  SKPKYLLAFTVGYSQKANVDACVKKF-SDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAK 97

Query: 75  NQTKWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVK 134
            QTKWWFAKRFLHPDIVA Y YIFLWDED+GV+NF+   Y+ IVK  GLEISQP LDP +
Sbjct: 98  KQTKWWFAKRFLHPDIVAPYEYIFLWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDR 157

Query: 135 SEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYM 194
            ++   IT RR + + H+   +          ST PPC G+VE+MAPVFSR AWRC W+M
Sbjct: 158 GQITWRITKRRGDGEVHKDTREKGRCCD---NSTGPPCTGFVEIMAPVFSRDAWRCVWHM 214

Query: 195 IQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVGQASDD 254
           IQNDL+H WGLD  L  C      + +GVVDS+++VH G+P+LG     E          
Sbjct: 215 IQNDLVHGWGLDFALRRCV-EPAHEKIGVVDSQWVVHQGIPSLGSQGTAE---------- 263

Query: 255 LEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVEDD 300
                                  VR +   E  +F+ RW  A ++ 
Sbjct: 264 ---------------NGKAPWQGVRDRCKAEWTMFQRRWAAAEKEY 294

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

>gnl|CDD|227427 COG5096, COG5096, Vesicle coat complex, various subunits [Intracellular trafficking and secretion]

 Score = 39.3 bits (92), Expect = 0.003
 Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 25/182 (13%)

Query: 113 RYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSK-AHRRMYKYKGSGRCDDYSTAPP 171
           R LS+++ +  E+    +DP+K  +  P    R+ +  A  ++Y+       D Y     
Sbjct: 114 RTLSLLRVK--ELLGNIIDPIKKLLTDPHAYVRKTAALAVAKLYRLDK----DLYHELGL 167

Query: 172 CIGWVEMMA---PVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEY 228
                E++A   P+    A   +   I  +L H + L++ L       R   + ++    
Sbjct: 168 IDILKELVADSDPIVIANALA-SLAEIDPELAHGYSLEVIL-------RIPQLDLLSLSV 219

Query: 229 IVHLGLPT-LGVTTEPELNTVGQASDDLE------QIANPVALAPSQSRRYDNRPEVRRQ 281
                L   L V TE    T   A D  E      Q  N   L  +          +   
Sbjct: 220 STEWLLLIILEVLTERVPTTPDSAEDFEERLSPPLQHNNAEVLLIAVKVILRLLVFLPSN 279

Query: 282 SY 283
           + 
Sbjct: 280 NL 281

Length = 757

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	316
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	100.0
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	94.45
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	93.86
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	93.08
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	90.9
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	88.41
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	88.36
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	88.36
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	86.55
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	86.51
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	82.46

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=100.00  E-value=4.7e-118  Score=839.37  Aligned_cols=260  Identities=65%  Similarity=1.184  Sum_probs=248.6

Q ss_pred             ccCCCCCCCcEEEEEecccchhhHHHHhhcCCCCCcEEEEEEecCccCccccccccCceeEEEeeccchhhhhhhccCcc
Q 021149           10 CQNNQRPPMNLLAIAAGIKQKKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQTKWWFAKRFLHPD   89 (316)
Q Consensus        10 ~~~~~~~~k~Lva~~vG~kqk~~vd~~v~kf~~~nF~v~LfhYDg~v~~w~d~ews~~aiHv~a~kqtKWw~akRfLhPd   89 (316)
                      .++...++|||||||||+|||++||++|+|| ++|||||||||||+||+|++||||++||||++.|||||||||||||||
T Consensus        34 ~~~~~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~vd~w~~~~ws~~aiHv~~~kqtKww~akrfLHPd  112 (294)
T PF05212_consen   34 SEDLPKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGRVDEWDDFEWSDRAIHVSARKQTKWWFAKRFLHPD  112 (294)
T ss_pred             cccccCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCCcCchhhcccccceEEEEeccceEEeehhhhcChh
Confidence            4556677899999999999999999999999 899999999999999999999999999999999999999999999999


Q ss_pred             ccccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccCCCCCceeccccccccCcccceeeeeccCCCCCCCCCCC
Q 021149           90 IVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTA  169 (316)
Q Consensus        90 iv~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~~~~~  169 (316)
                      ||++|||||||||||+||+|+|+|||+||++||||||||||+++|+++||+||+|++.++|||.   .++++.|.+++++
T Consensus       113 iv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~~~~iT~R~~~~~vhr~---~~~~~~~~~~~~~  189 (294)
T PF05212_consen  113 IVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEIHHPITKRRPDSEVHRK---TRGGPRCCDDSTG  189 (294)
T ss_pred             hhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCceeeeeEEeecCCceeEec---cCCCCCcCCCCCC
Confidence            9999999999999999999999999999999999999999999998999999999999999993   5778888899999


Q ss_pred             CCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEEeccCCCCCCCCCccccccc
Q 021149          170 PPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTLGVTTEPELNTVG  249 (316)
Q Consensus       170 ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~ptlg~~~~~~~~~~~  249 (316)
                      ||||||||||||||||+|||||||||||||+|||||||+|+||+ +++++||||||||||+|+++|||||++.++.    
T Consensus       190 ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~~~~~kiGVVDs~~VvH~gvptLG~~~~~~~----  264 (294)
T PF05212_consen  190 PPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-GDRHKKIGVVDSQYVVHTGVPTLGGQGNSEK----  264 (294)
T ss_pred             CCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-ccccccEEEEeeEEEEEcCCCcCCCcccccc----
Confidence            99999999999999999999999999999999999999999999 6899999999999999999999999886632    


Q ss_pred             CCCchhhhhccccccCCCCCCCCCChhHHHhhhHHHHHHHHHHHHHhHhc
Q 021149          250 QASDDLEQIANPVALAPSQSRRYDNRPEVRRQSYIEMQIFRNRWKHAVED  299 (316)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vr~r~~~E~~~f~~Rw~~A~~~  299 (316)
                                           +.++|.+||+||++||++|++||++|++|
T Consensus       265 ---------------------~~~~~~~Vr~r~~~E~~~F~~R~~~a~~~  293 (294)
T PF05212_consen  265 ---------------------GKDPREEVRRRSFAEMRIFQKRWANAVKE  293 (294)
T ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                                 45789999999999999999999999986

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.45  E-value=0.14  Score=43.49  Aligned_cols=101  Identities=17%  Similarity=0.239  Sum_probs=67.5

Q ss_pred             ccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccCCCCCceeccccccccCcccceeeeeccCCCCCCCCCCCCC
Q 021149           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  171 (316)
Q Consensus        92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~~~~~pp  171 (316)
                      +.+|||++.|+|..++..-+.++.+.+++.++.+..|..-...+                                   +
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~  122 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-----------------------------------S  122 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-----------------------------------c
Confidence            57999999999999998888888888775555554443222110                                   1


Q ss_pred             ccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEEeccCCCC
Q 021149          172 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTL  237 (316)
Q Consensus       172 cTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~ptl  237 (316)
                      +.++      +++|++|..+ . .+.+.-..||=|.-+.+-+. ..+.+| .+.+..+.|....+.
T Consensus       123 ~~~~------~~~~~~~~~~-g-~~~~~~~~~~eD~~~~~r~~-~~G~~i-~~~~~~~~h~~~~~~  178 (202)
T cd04185         123 FVGV------LISRRVVEKI-G-LPDKEFFIWGDDTEYTLRAS-KAGPGI-YVPDAVVVHKTAINK  178 (202)
T ss_pred             eEEE------EEeHHHHHHh-C-CCChhhhccchHHHHHHHHH-HcCCcE-EecceEEEEcccccc
Confidence            1121      4889999876 2 23444567887777754443 235688 999999999985443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.86  E-value=0.15  Score=40.81  Aligned_cols=92  Identities=20%  Similarity=0.150  Sum_probs=61.2

Q ss_pred             cccEEEEeccccccCCCChHHHHHHHHHh-CCcccccccCCCCCceeccccccccCcccceeeeeccCCCCCCCCCCCCC
Q 021149           93 EYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  171 (316)
Q Consensus        93 ~YdYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~~~~~pp  171 (316)
                      .+|||++.|+|..++...+.++.+.+.+. +..+..+.                                          
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------------  111 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK------------------------------------------  111 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc------------------------------------------
Confidence            79999999999999888788877754432 22222222                                          


Q ss_pred             ccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEEecc
Q 021149          172 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       172 cTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                          +=.-+.+|++++++.+=  .+++.-..+|-|..+...+. ..+.+|..+....+.|.+
T Consensus       112 ----~~~~~~~~~~~~~~~~~--~~~~~~~~~~eD~~~~~~~~-~~g~~i~~~~~~~~~h~~  166 (166)
T cd04186         112 ----VSGAFLLVRREVFEEVG--GFDEDFFLYYEDVDLCLRAR-LAGYRVLYVPQAVIYHHG  166 (166)
T ss_pred             ----CceeeEeeeHHHHHHcC--CCChhhhccccHHHHHHHHH-HcCCeEEEccceEEEecC
Confidence                00124588999998762  23343334777777765543 235789999999999964

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=93.08  E-value=0.35  Score=44.03  Aligned_cols=128  Identities=15%  Similarity=0.065  Sum_probs=72.2

Q ss_pred             ccccEEEEeccccccCCCChHHHHHHHHHh--CCccccccc-CCCCCceeccccccccCcccceeeeeccCCCCCCCCCC
Q 021149           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE--GLEISQPAL-DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYST  168 (316)
Q Consensus        92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~--gLeISQPAL-d~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~~~~  168 (316)
                      +.+|||++.|+|..++...+.++++.+++.  +.-+..|.. +.+.. ...+...... . .-+..       ... ...
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~-------~~~-~~~  140 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTS-RRLPAIHLDG-L-LLRQI-------SLD-GLT  140 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCc-ccCCceeecc-c-ceeee-------ccc-ccC
Confidence            379999999999999999999999988876  567777764 33221 1112111111 0 00000       000 000


Q ss_pred             CCCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEEecc
Q 021149          169 APPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       169 ~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                      .+.-+.++=.-..+++|++++.+= + +++.--.++.|.-|..-+. ..+.+|.++....+.|..
T Consensus       141 ~~~~~~~~~~sg~li~~~~~~~iG-~-fde~~fi~~~D~e~~~R~~-~~G~~i~~~~~~~~~H~~  202 (281)
T TIGR01556       141 TPQKTSFLISSGCLITREVYQRLG-M-MDEELFIDHVDTEWSLRAQ-NYGIPLYIDPDIVLEHRI  202 (281)
T ss_pred             CceeccEEEcCcceeeHHHHHHhC-C-ccHhhcccchHHHHHHHHH-HCCCEEEEeCCEEEEEec
Confidence            111111110012368999999873 2 3333334567777743332 235689999999999974

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=90.90  E-value=4.1  Score=37.61  Aligned_cols=139  Identities=14%  Similarity=0.087  Sum_probs=75.8

Q ss_pred             ccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccCCCCC-ceecccccc-cc---CcccceeeeeccCCCCCCCC
Q 021149           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS-EVHHPITAR-RR---NSKAHRRMYKYKGSGRCDDY  166 (316)
Q Consensus        92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~-~ish~iT~r-~~---~~~vHr~~~~~~~~~~C~~~  166 (316)
                      +..|||++.|.|..++..-++++++.+.+..-.+.-|.+..-.+ .+.+.-... ..   ...++...........+...
T Consensus        82 A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (299)
T cd02510          82 ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRES  161 (299)
T ss_pred             ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcC
Confidence            67899999999999999999999999998887777787653211 122221111 00   00011000000000000111


Q ss_pred             CCCCCccceEEEeccccchHHHHHHhhhccCCCcccch-hhhhhh-hhhcCCCCCcEEEEeeceEEeccC
Q 021149          167 STAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLG-YCAQGDRTKNVGVVDSEYIVHLGL  234 (316)
Q Consensus       167 ~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWG-LD~~w~-~c~~g~~~~kiGVVDa~~V~H~~~  234 (316)
                      +..+..+..+-..+=+|+|++|..+=.  +......|| =|.-+. ++.+  .+.+|-++-...|.|...
T Consensus       162 ~~~~~~~~~~~g~~~~irr~~~~~vGg--fDe~~~~~~~ED~Dl~~R~~~--~G~~i~~~p~a~v~H~~~  227 (299)
T cd02510         162 PTAPIRSPTMAGGLFAIDREWFLELGG--YDEGMDIWGGENLELSFKVWQ--CGGSIEIVPCSRVGHIFR  227 (299)
T ss_pred             CCCCccCccccceeeEEEHHHHHHhCC--CCCcccccCchhHHHHHHHHH--cCCeEEEeeccEEEEecc
Confidence            112222333333344688999988732  344445565 344442 2221  235799999999999864

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=88.41  E-value=1.3  Score=38.15  Aligned_cols=128  Identities=9%  Similarity=-0.026  Sum_probs=68.0

Q ss_pred             ccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccCCCCCceeccccccccCcccceeeeeccCCCCCCCC-C-CC
Q 021149           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDY-S-TA  169 (316)
Q Consensus        92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~~-~-~~  169 (316)
                      +.+|||.+.|+|..++...++++++..++.+..+.++...............+...+.+.     ......+... . ..
T Consensus        80 a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  154 (249)
T cd02525          80 SRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLG-----SGGSAYRGGAVKIGY  154 (249)
T ss_pred             hCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhc-----cCCcccccccccccc
Confidence            479999999999999999999999888888877766544321110111000000000000     0000000000 0 00


Q ss_pred             CCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhh-hhhcCCCCCcEEEEeeceEEeccC
Q 021149          170 PPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLG-YCAQGDRTKNVGVVDSEYIVHLGL  234 (316)
Q Consensus       170 ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~-~c~~g~~~~kiGVVDa~~V~H~~~  234 (316)
                      ..+.++   |  +|+|++|+.+= . ++. ....|-|+.+. ++.+  .+.++..+....+.|...
T Consensus       155 ~~~~~~---~--~~~~~~~~~~g-~-~~~-~~~~~eD~~l~~r~~~--~G~~~~~~~~~~~~~~~~  210 (249)
T cd02525         155 VDTVHH---G--AYRREVFEKVG-G-FDE-SLVRNEDAELNYRLRK--AGYKIWLSPDIRVYYYPR  210 (249)
T ss_pred             cccccc---c--eEEHHHHHHhC-C-CCc-ccCccchhHHHHHHHH--cCcEEEEcCCeEEEEcCC
Confidence            001111   1  57899998763 2 222 22346677665 4443  356899999888888763

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=88.36  E-value=1.1  Score=38.88  Aligned_cols=127  Identities=14%  Similarity=0.132  Sum_probs=61.8

Q ss_pred             cccEEEEeccccccCCCChHHHH---HHHH-HhCCcccccccCCCCCceeccccccccCcccceeeeeccCCCCCCCCCC
Q 021149           93 EYNYIFLWDEDIGVENFNPRRYL---SIVK-DEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYST  168 (316)
Q Consensus        93 ~YdYIflwDDDL~vd~f~i~ry~---~Ivr-~~gLeISQPALd~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~~~~  168 (316)
                      .||||++.|+|..++...+.+++   .... ...+-+..|.............. +.....+ . .  ..    +..  .
T Consensus        75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~--~~----~~~--~  143 (237)
T cd02526          75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGV-RKSGYKL-R-I--QK----EGE--E  143 (237)
T ss_pred             CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccce-eccCccc-e-e--cc----ccc--C
Confidence            68999999999999988888885   2222 22444555544322211111110 0000000 0 0  00    000  0


Q ss_pred             CCCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEEecc
Q 021149          169 APPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       169 ~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                      ..+-..++=.-+-+|+|++++.+=.+  .+.....|-|+.+...+. ..+.++..+....|.|..
T Consensus       144 ~~~~~~~~~~~~~~~rr~~~~~~ggf--d~~~~~~~eD~d~~~r~~-~~G~~~~~~~~~~v~h~~  205 (237)
T cd02526         144 GLKEVDFLITSGSLISLEALEKVGGF--DEDLFIDYVDTEWCLRAR-SKGYKIYVVPDAVLKHEL  205 (237)
T ss_pred             CceEeeeeeccceEEcHHHHHHhCCC--CHHHcCccchHHHHHHHH-HcCCcEEEEcCeEEEecc
Confidence            00000011011125789999887322  222223355666654442 235689888888888864

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=88.36  E-value=0.62  Score=40.03  Aligned_cols=93  Identities=17%  Similarity=0.144  Sum_probs=54.9

Q ss_pred             ccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccCCCCCceeccccccccCcccceeeeeccCCCCCCCCCCCCC
Q 021149           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYSTAPP  171 (316)
Q Consensus        92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~~~~~pp  171 (316)
                      +.+|||++.|.|..++...+.++++.+.       +|..+--.+.                          |        
T Consensus        85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~-------~~~~~~v~~~--------------------------~--------  123 (196)
T cd02520          85 ARYDILVISDSDISVPPDYLRRMVAPLM-------DPGVGLVTCL--------------------------C--------  123 (196)
T ss_pred             CCCCEEEEECCCceEChhHHHHHHHHhh-------CCCCCeEEee--------------------------c--------
Confidence            5799999999999887777777665542       2322211110                          0        


Q ss_pred             ccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEEecc
Q 021149          172 CIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       172 cTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                      ++    ..+=+|+|++++.+=.+  .....-.+=|+.+...+. ..+.+|.+++.. ++|..
T Consensus       124 ~~----g~~~~~r~~~~~~~ggf--~~~~~~~~eD~~l~~rl~-~~G~~i~~~~~~-~~~~~  177 (196)
T cd02520         124 AF----GKSMALRREVLDAIGGF--EAFADYLAEDYFLGKLIW-RLGYRVVLSPYV-VMQPL  177 (196)
T ss_pred             cc----CceeeeEHHHHHhccCh--HHHhHHHHHHHHHHHHHH-HcCCeEEEcchh-eeccC
Confidence            01    12347889999876322  221223466888876654 246789888775 45543

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=86.55  E-value=0.98  Score=39.01  Aligned_cols=198  Identities=16%  Similarity=0.104  Sum_probs=89.0

Q ss_pred             cEEEEEecccchhhHHHHhhcCCC---CCcEEEEEEecCccCcccc-c-----cccCceeEEEee---cc--chhhhhhh
Q 021149           19 NLLAIAAGIKQKKIVDQIVRKFPS---KDFVVMLFHYDGVVDEWKD-L-----VWADRAIHVSAA---NQ--TKWWFAKR   84 (316)
Q Consensus        19 ~Lva~~vG~kqk~~vd~~v~kf~~---~nF~v~LfhYDg~v~~w~d-~-----ews~~aiHv~a~---kq--tKWw~akR   84 (316)
                      -.|++|+-... ..+...++....   .++.|+++- |+..++=.+ +     ++....+++...   .+  +|-.-++.
T Consensus         3 v~Vvip~~~~~-~~l~~~l~sl~~~~~~~~~v~vvd-~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~   80 (228)
T PF13641_consen    3 VSVVIPAYNED-DVLRRCLESLLAQDYPRLEVVVVD-DGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALNE   80 (228)
T ss_dssp             EEEE--BSS-H-HHHHHHHHHHTTSHHHTEEEEEEE-E-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHH
T ss_pred             EEEEEEecCCH-HHHHHHHHHHHcCCCCCeEEEEEE-CCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHH
Confidence            45566654332 355555554432   468888876 343333211 1     233323444332   22  23332333


Q ss_pred             ccCccccccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccCCCCCceeccccccccCcccceeeeeccCCCCCC
Q 021149           85 FLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCD  164 (316)
Q Consensus        85 fLhPdiv~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~  164 (316)
                      .+.   ...+|||++.|+|..++...+.++++.+...+..+.++........  ..++.-......+...  ....  ..
T Consensus        81 ~~~---~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~--~~  151 (228)
T PF13641_consen   81 ALA---AARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDR--NWLTRLQDLFFARWHL--RFRS--GR  151 (228)
T ss_dssp             HHH---H---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCC--CEEEE-TT--S-EETT--TS-T--T-
T ss_pred             HHH---hcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCC--CHHHHHHHHHHhhhhh--hhhh--hh
Confidence            331   1459999999999999999999999999778888888665332211  1111111000000000  0000  00


Q ss_pred             CCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEEeccCCC
Q 021149          165 DYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT  236 (316)
Q Consensus       165 ~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~pt  236 (316)
                      .....+.++|    -+=+|+|++++.+-.  ++.  ..-|=|+.+...+.. .+.+|.......|.|...++
T Consensus       152 ~~~~~~~~~G----~~~~~rr~~~~~~g~--fd~--~~~~eD~~l~~r~~~-~G~~~~~~~~~~v~~~~~~~  214 (228)
T PF13641_consen  152 RALGVAFLSG----SGMLFRRSALEEVGG--FDP--FILGEDFDLCLRLRA-AGWRIVYAPDALVYHEEPSS  214 (228)
T ss_dssp             B----S-B------TEEEEEHHHHHHH-S----S--SSSSHHHHHHHHHHH-TT--EEEEEEEEEEE--SSS
T ss_pred             cccceeeccC----cEEEEEHHHHHHhCC--CCC--CCcccHHHHHHHHHH-CCCcEEEECCcEEEEeCCCC
Confidence            0000111221    123689999998842  234  444578877644432 45789999888888886444

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=86.51  E-value=0.49  Score=40.69  Aligned_cols=129  Identities=13%  Similarity=0.006  Sum_probs=72.3

Q ss_pred             ccccEEEEeccccccCCCChHHHHHHHHH-hCCcccccccC--CCCCceecccccccc--CcccceeeeeccCCCCCCCC
Q 021149           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKD-EGLEISQPALD--PVKSEVHHPITARRR--NSKAHRRMYKYKGSGRCDDY  166 (316)
Q Consensus        92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~-~gLeISQPALd--~~s~~ish~iT~r~~--~~~vHr~~~~~~~~~~C~~~  166 (316)
                      +.+|||++.|+|..++...+.++++.+.+ .++.+.++...  .... .. .+.....  ...+.+.+.  .+...+   
T Consensus        83 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--~~~~~~---  155 (234)
T cd06421          83 TTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDP-FD-WLADGAPNEQELFYGVIQ--PGRDRW---  155 (234)
T ss_pred             CCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCc-ch-hHHHHHHHHHHHHHHHHH--HHHhhc---
Confidence            48999999999999999999999999987 77777776421  1111 10 0111000  000000000  000000   


Q ss_pred             CCCCCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEEeccCCCC
Q 021149          167 STAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPTL  237 (316)
Q Consensus       167 ~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~ptl  237 (316)
                          ++ .++=.+.=+|+|++++.+-.+  +.  ...+-|+.+..-+. ..+.+|..++...+.|...+++
T Consensus       156 ----~~-~~~~g~~~~~r~~~~~~ig~~--~~--~~~~eD~~l~~r~~-~~g~~i~~~~~~~~~~~~~~~~  216 (234)
T cd06421         156 ----GA-AFCCGSGAVVRREALDEIGGF--PT--DSVTEDLATSLRLH-AKGWRSVYVPEPLAAGLAPETL  216 (234)
T ss_pred             ----CC-ceecCceeeEeHHHHHHhCCC--Cc--cceeccHHHHHHHH-HcCceEEEecCccccccCCccH
Confidence                11 122234557899999987533  22  34577888864332 2356888888777776654433

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=82.46  E-value=0.98  Score=38.12  Aligned_cols=119  Identities=12%  Similarity=0.017  Sum_probs=63.7

Q ss_pred             cccccEEEEeccccccCCCChHHHHHHHHHh-CCcccccccCCC--CCceeccccccccCcccceeeeeccCCCCCCCCC
Q 021149           91 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPALDPV--KSEVHHPITARRRNSKAHRRMYKYKGSGRCDDYS  167 (316)
Q Consensus        91 v~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~--s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~~~  167 (316)
                      .+.+|||++.|+|..++.-.+.+.++.+.++ +..|..+....-  .+.-.+...  .+..  .+..+. -....|    
T Consensus        78 ~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~-~~~~~~----  148 (201)
T cd04195          78 HCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR--LPTS--HDDILK-FARRRS----  148 (201)
T ss_pred             hcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc--CCCC--HHHHHH-HhccCC----
Confidence            3589999999999999988888988887654 566665543211  111111111  0100  000000 000111    


Q ss_pred             CCCCccceEEEeccccchHHHHHHhhhccCCCcccchhhhhhhhhhcCCCCCcEEEEeeceEE
Q 021149          168 TAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIV  230 (316)
Q Consensus       168 ~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~  230 (316)
                             ++..++=+|.|+++..+-.+  ...  -.+-|+.+...+- ..+.++..+....+.
T Consensus       149 -------~~~~~~~~~rr~~~~~~g~~--~~~--~~~eD~~~~~r~~-~~g~~~~~~~~~~~~  199 (201)
T cd04195         149 -------PFNHPTVMFRKSKVLAVGGY--QDL--PLVEDYALWARML-ANGARFANLPEILVK  199 (201)
T ss_pred             -------CCCChHHhhhHHHHHHcCCc--CCC--CCchHHHHHHHHH-HcCCceecccHHHhh
Confidence                   11111236889999887532  232  4677888765542 235678877655443

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	316
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 54/406 (13%), Positives = 99/406 (24%), Gaps = 152/406 (37%)

Query: 28  KQKKIV----DQIVRKFPSK---DFVVMLF---HYDGVVDEWKDLVWADRAIHVSAANQT 77
           + K I+    D  V  F  K   D    +      D ++     +    R      + Q 
Sbjct: 17  QYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76

Query: 78  KWWFAKRFLHPDIVAEYNYIFLWDEDIGVENFNP----RRYLSIVKDEGLEISQPALDPV 133
           +    ++F+  + V   NY FL    I  E   P    R Y+     + L          
Sbjct: 77  E--MVQKFV--EEVLRINYKFLMSP-IKTEQRQPSMMTRMYIEQR--DRLYNDNQVFAKY 129

Query: 134 KSEVHHPITARRRNSKAHRR--------MYKYKGSGR-------CDDYS--TAPPC-IGW 175
                 P    R+     R         +    GSG+       C  Y         I W
Sbjct: 130 NVSRLQPYLKLRQALLELRPAKNVLIDGV---LGSGKTWVALDVCLSYKVQCKMDFKIFW 186

Query: 176 VEM------------------------------MAPVFSRAAW---------------RC 190
           + +                               + +  R                   C
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 191 AWYMIQNDLIHAW---GLDIQLGYCAQGDR----TKNVGVVD---SEYIVHLGL-PTLGV 239
              ++  ++ +A      ++    C    +    T+   V D   +    H+ L      
Sbjct: 247 --LLVLLNVQNAKAWNAFNLS---C----KILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 240 TTEPE-----LNTVGQASDDL-EQIA--NPVALA---------PSQSRRYDN-------- 274
            T  E     L  +     DL  ++   NP  L+          +    + +        
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT 357

Query: 275 ---------RPEVRRQSYIEMQIFRNR-----------WKHAVEDD 300
                     P   R+ +  + +F              W   ++ D
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD 403

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	316
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	88.31
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	82.21
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	81.87

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=88.31  E-value=1  Score=37.99  Aligned_cols=119  Identities=8%  Similarity=-0.073  Sum_probs=67.4

Q ss_pred             ccccEEEEeccccccCCCChHHHHHHHHHh-CCccccccc-----CCCCCceeccccccccCcccceeeeeccCCCCCCC
Q 021149           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPAL-----DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDD  165 (316)
Q Consensus        92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPAL-----d~~s~~ish~iT~r~~~~~vHr~~~~~~~~~~C~~  165 (316)
                      +..|||++.|+|..++...+.++++.+.+. +..+..+..     +.+ +...+.. . .+...+.          .   
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~----------~---  150 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKET-V-RPAAQVT----------W---  150 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-E-ECCCSCB----------S---
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCC-Ccchhhc-c-CchHHHH----------H---
Confidence            578999999999999998999999999876 666666553     221 1111110 0 0000000          0   


Q ss_pred             CCCCCCccceEEEeccccchHHHHHHh-hh--ccC-CCcccchhhhhhhhhhcCCCCCcEEEEeeceEEecc
Q 021149          166 YSTAPPCIGWVEMMAPVFSRAAWRCAW-YM--IQN-DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       166 ~~~~ppcTgFVEiMaPVFSR~Awrcvw-~m--iqn-dlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                           ....++-..+=+|+|++++.+- .+  ..+ +.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus       151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~  215 (255)
T 1qg8_A          151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI  215 (255)
T ss_dssp             -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred             -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence                 0011111234478999998863 22  011 222334567766544432 23 69999998888775

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=82.21  E-value=2.5  Score=39.96  Aligned_cols=137  Identities=15%  Similarity=0.075  Sum_probs=70.6

Q ss_pred             ccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccC---CCCCceecc----ccccccCcccceeeeeccC---CC
Q 021149           92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD---PVKSEVHHP----ITARRRNSKAHRRMYKYKG---SG  161 (316)
Q Consensus        92 ~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd---~~s~~ish~----iT~r~~~~~vHr~~~~~~~---~~  161 (316)
                      +..|||++.|+|..++..-++++++.+++..-.+.-|.++   .+.  +.+.    .+...-...++........   ..
T Consensus       113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (472)
T 1xhb_A          113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDT--FEYMAGSDMTYGGFNWKLNFRWYPVPQREMDR  190 (472)
T ss_dssp             CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSS--CCEECCCTTEEEEECTTCCEEEEECCHHHHHH
T ss_pred             ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCC--ceeccCCCcccceeeccceeecccCCHHHHhc
Confidence            5689999999999999999999999998877656666542   111  1110    0000000000000000000   00


Q ss_pred             CCCCCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccch---hhhhhhhhhcCCCCCcEEEEeeceEEeccCCC
Q 021149          162 RCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG---LDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT  236 (316)
Q Consensus       162 ~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWG---LD~~w~~c~~g~~~~kiGVVDa~~V~H~~~pt  236 (316)
                      +- .....+-.+.++-..+=+|+|++|..+=  -++.....||   +|+.+.-...   +.+|.++....|.|....+
T Consensus       191 ~~-~~~~~~~~~~~~~g~~~~irr~~~~~iG--gfde~~~~~g~ED~dl~~R~~~~---G~~i~~~p~~~v~H~~~~~  262 (472)
T 1xhb_A          191 RK-GDRTLPVRTPTMAGGLFSIDRDYFQEIG--TYDAGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFRKA  262 (472)
T ss_dssp             TT-TCTTSCEECSBCCSSSEEEEHHHHHHTT--SCCTTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC---
T ss_pred             cc-CCCCCcccCccccceeEEEEHHHHHHcC--CCCCcccccCchhHHHHHHHHhc---CCeEEEccCcEEEEEccCc
Confidence            00 0000111111111122357999999873  2345555664   3444443333   4689999999999987543

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=81.87  E-value=4.8  Score=39.33  Aligned_cols=216  Identities=13%  Similarity=0.122  Sum_probs=99.6

Q ss_pred             CCcEEEEEecccchhhHHHHhh----cCCCCCcEEEEEEecCccCccccc-c-ccC-ceeEEEeeccchhhhhhhccCcc
Q 021149           17 PMNLLAIAAGIKQKKIVDQIVR----KFPSKDFVVMLFHYDGVVDEWKDL-V-WAD-RAIHVSAANQTKWWFAKRFLHPD   89 (316)
Q Consensus        17 ~k~Lva~~vG~kqk~~vd~~v~----kf~~~nF~v~LfhYDg~v~~w~d~-e-ws~-~aiHv~a~kqtKWw~akRfLhPd   89 (316)
                      ++.-|++|+=.. ...+...+.    .-...++.|+++. ||+.|+=.++ + +.+ ..+++........-.+...-.-=
T Consensus        93 p~vsviIp~~n~-~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g~  170 (625)
T 2z86_A           93 DGLSIVIPTYNR-AKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGL  170 (625)
T ss_dssp             CCEEEEEEESSC-HHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHHH
T ss_pred             CcEEEEEecCCc-HHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHHH
Confidence            345566776433 344444443    3222478887776 7776653221 1 111 12333333221111111000111


Q ss_pred             ccccccEEEEeccccccCCCChHHHHHHHHHhC-CcccccccCCCCCceecc------ccccc-cC----cccceeeeec
Q 021149           90 IVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEG-LEISQPALDPVKSEVHHP------ITARR-RN----SKAHRRMYKY  157 (316)
Q Consensus        90 iv~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~g-LeISQPALd~~s~~ish~------iT~r~-~~----~~vHr~~~~~  157 (316)
                      -.+..|||++.|+|..++...+.++++.+.+.. .-+.+|..-.........      -..+. +.    ..+.......
T Consensus       171 ~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (625)
T 2z86_A          171 RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQN  250 (625)
T ss_dssp             HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------------
T ss_pred             HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccC
Confidence            135789999999999999999999999998643 444444321111000000      00000 00    0000000000


Q ss_pred             cCCCC------CC-CCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccch-hhhhhhhhhcCCCCCcEEEEeeceE
Q 021149          158 KGSGR------CD-DYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEYI  229 (316)
Q Consensus       158 ~~~~~------C~-~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWG-LD~~w~~c~~g~~~~kiGVVDa~~V  229 (316)
                      .+..+      .. .....+....++=..+=+|+|+++..+= . ++....+|| =|+-+..-+. ..+.++.++....+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iG-g-fde~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v  327 (625)
T 2z86_A          251 KSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAG-W-FDEEFTHWGGEDNEFGYRLY-REGCYFRSVEGAMA  327 (625)
T ss_dssp             -CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHC-C-CCTTCSSCCCHHHHHHHHHH-HTTCEEEECGGGCE
T ss_pred             CccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhC-C-CccccccCCcchhhhhhhHH-hCCceEEEcccchh
Confidence            00000      00 0000001112233345578999999873 2 345455664 5655543332 13469999999999


Q ss_pred             EeccCCCC
Q 021149          230 VHLGLPTL  237 (316)
Q Consensus       230 ~H~~~ptl  237 (316)
                      .|...++.
T Consensus       328 ~H~~~~~~  335 (625)
T 2z86_A          328 YHQEPPGK  335 (625)
T ss_dssp             EEECCC--
T ss_pred             hccCCccc
Confidence            99976543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	316
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	82.77

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.77  E-value=0.62  Score=39.31  Aligned_cols=214  Identities=14%  Similarity=0.101  Sum_probs=103.3

Q ss_pred             CCCcEEEEEecccchh----hHHHHhhcCCCCCcE-EEEEEecCccCccc-c-c-ccc---CceeEEEeeccch-hhhhh
Q 021149           16 PPMNLLAIAAGIKQKK----IVDQIVRKFPSKDFV-VMLFHYDGVVDEWK-D-L-VWA---DRAIHVSAANQTK-WWFAK   83 (316)
Q Consensus        16 ~~k~Lva~~vG~kqk~----~vd~~v~kf~~~nF~-v~LfhYDg~v~~w~-d-~-ews---~~aiHv~a~kqtK-Ww~ak   83 (316)
                      .|..=|++|+=.....    -+++++.+- ..++. =+++.=||+.|+-- . + ++.   ..-|++....+.. .-.+.
T Consensus        21 ~P~vSIIIp~yNe~~~~l~~~l~Si~~qt-~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~n~G~~~a~   99 (328)
T d1xhba2          21 LPTTSVVIVFHNEAWSTLLRTVHSVINRS-PRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRAR   99 (328)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHSS-CGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHH
T ss_pred             CCCEEEEEeccCCcHHHHHHHHHHHHhcC-CCCCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEecccccchHHH
Confidence            3555677777543333    345555542 23432 24555688877521 1 1 111   1124543322222 11111


Q ss_pred             hccCccccccccEEEEeccccccCCCChHHHHHHHHHhCCcccccccCC---CCCcee--ccccccccCccccee--eee
Q 021149           84 RFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDP---VKSEVH--HPITARRRNSKAHRR--MYK  156 (316)
Q Consensus        84 RfLhPdiv~~YdYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~---~s~~is--h~iT~r~~~~~vHr~--~~~  156 (316)
                      .  ..=-.+.-|||++.|+|..++.-.++++++.+.+..-.+..|.++.   +...+.  ...+.-.-...++.+  .+.
T Consensus       100 N--~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (328)
T d1xhba2         100 L--KGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVP  177 (328)
T ss_dssp             H--HHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECC
T ss_pred             H--HHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccc
Confidence            1  1122467899999999999999999999999999888777776532   110000  000000000000000  000


Q ss_pred             ccCCCCCCCCCCCCCccceEEEeccccchHHHHHHhhhccCCCcccch---hhhhhhhhhcCCCCCcEEEEeeceEEecc
Q 021149          157 YKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG---LDIQLGYCAQGDRTKNVGVVDSEYIVHLG  233 (316)
Q Consensus       157 ~~~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqndlvhGWG---LD~~w~~c~~g~~~~kiGVVDa~~V~H~~  233 (316)
                      ...........+.+..+.++..-+=.++|++|..+= . ++.....||   +|+-+.....   +.+|..+-...|.|..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vG-g-fDe~~~~~g~ED~Dl~~R~~~~---G~~i~~~p~~~v~H~~  252 (328)
T d1xhba2         178 QREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIG-T-YDAGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVF  252 (328)
T ss_dssp             HHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTT-S-CCTTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC
T ss_pred             hhhhhccccccccccccceecceeeeeeHHHHHHhC-C-CCCCCcCcCchHHHHHHHHHHh---CCeEEEeCCeEEEEeC
Confidence            000000001111222222332222246899999872 2 455555665   4555544433   4689999999999975


Q ss_pred             CCCC
Q 021149          234 LPTL  237 (316)
Q Consensus       234 ~ptl  237 (316)
                      ..+.
T Consensus       253 ~~~~  256 (328)
T d1xhba2         253 RKAT  256 (328)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            4333