Citrus Sinensis ID: 021197

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
Protein Sequence
MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPDPEGAKITKKIESEFHRIGDKNGLINSLNGLKVDG
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHccccccHHHHHHHHccccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHcccccccEEEEEEccccccccccHHHHHHHHHHHHHHccccccccEEEEccccccHHHHHHHcccccHHccccEEEEccccHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccEEcccEEEEcccccEEEcccccccccEEEEEccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHcccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccEEEEEEccccccccccHHHHHHHHHHcccccccccccEEEEEEcccHHHHHHHHHHHHccHHHHHHEEEccccHHHHHHHHccHHHccHHccccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEcccccccccccccccHHHHHHHHHHHHHHHcccccccccccccEEcc
Coil and Loop (DISEMBL)
MAHQEEIKQFQTLMEDLDDSLKETFKnvhqgnptDTLVRFLKARdwnvskahkmkpilpaELYRAVrdsqlvgvsgyskeglpVIAVGVGLSTHDKASVNYYVQSHIQMneyrdrvvlpsaskkhgryigtSLKVLDMTGLKLSALNQIKLMTVITtiddlnypektetyyivnapYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDyaslphfcrkegsgssrhigngttencfslDHAFHQRLYNYIKQQAVLtesvvpirqgsfhvdfpepdpegaKITKKIESEFhrigdknglinslnglkvdg
Flexible Loop (DISEMBL)
MAHQEEIKQFQTLMEDLDDSLKETFknvhqgnptDTLVRFLKARDWnvskahkmkpilpaeLYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLpsaskkhgryigtslkvldMTGLKLSALNQIKLMTVIttiddlnypEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQvlqgngrdeLLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSfhvdfpepdpEGAKITKKIESefhrigdknglinslnglkvdg
Low Complexity Region (SEG)
MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPDPEGAKITKKIESEFHRIGDKNGLINSLNGLKVDG
Disordered region (IsUnstruct)
********************************PTDTLVRFLKARDWNVSKAHKMKPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRK*******HIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDF**************************************
Disordered Region (DISOPRED)
*AHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNY**********************FPEPDPEGAKITKKIESEFHRIGDKNGLINSLN*L****
Disordered Region (DISEMBL)
MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPDPEGAKITKKIESEFHRIGDKNGLINSLNGLKVDG
Disordered Region (DISPRO)
MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPDPEGAKITKKIESEFHRIGDKNGLINSLN***V**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPDPEGAKITKKIESEFHRIGDKNGLINSLNGLKVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	316	2.2.26 [Sep-21-2011]
P46250	301	SEC14 cytosolic factor OS	N/A	no	0.556	0.584	0.286	3e-12
Q8R0F9	403	SEC14-like protein 4 OS=M	yes	no	0.651	0.511	0.268	1e-11
P45816	492	SEC14 cytosolic factor OS	yes	no	0.613	0.394	0.297	3e-11
P33324	310	CRAL-TRIO domain-containi	yes	no	0.632	0.645	0.253	6e-11
P58875	403	SEC14-like protein 2 OS=B	no	no	0.75	0.588	0.266	1e-10
Q75DK1	308	SEC14 cytosolic factor OS	yes	no	0.645	0.662	0.266	1e-10
Q03606	719	CRAL-TRIO domain-containi	yes	no	0.832	0.365	0.262	2e-10
Q92503	715	SEC14-like protein 1 OS=H	yes	no	0.651	0.288	0.266	2e-10
Q9UDX3	406	SEC14-like protein 4 OS=H	no	no	0.544	0.423	0.287	4e-10
P24280	304	SEC14 cytosolic factor OS	no	no	0.617	0.641	0.249	5e-10

>sp|P46250|SEC14_CANAL SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 37/213 (17%)

Query: 36  TLVRFLKARDWNVSKAHKM------------------------KPIL----PAELYRAVR 67
           +L+RFL+AR +++ KA  M                        KPI+    P   ++  +
Sbjct: 57  SLLRFLRARKFDIQKAIDMFVACEKWREDFGVNTILKDFHYEEKPIVAKMYPTYYHKTDK 116

Query: 68  DSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGR 127
           D + V      K  L  +   + ++T ++   N  V  +  M +YR    LP+ S+K G 
Sbjct: 117 DGRPVYFEELGKVDLVKM---LKITTQERMLKNL-VWEYEAMCQYR----LPACSRKAGY 168

Query: 128 YIGTSLKVLDMTGLKL-SALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV 186
            + TS  VLD++G+ + SA N I  +   + I    YPE+   +Y++NAP+ FS  +K+ 
Sbjct: 169 LVETSCTVLDLSGISVTSAYNVIGYVREASKIGQDYYPERMGKFYLINAPFGFSTAFKLF 228

Query: 187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLP 219
           KP L   T  K+ +L  + + ELLK +   +LP
Sbjct: 229 KPFLDPVTVSKIHILGYSYKKELLKQIPPQNLP 261

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.
Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

>sp|Q8R0F9|S14L4_MOUSE SEC14-like protein 4 OS=Mus musculus GN=Sec14l4 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 32/238 (13%)

Query: 3   HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM-------- 54
            QE + +F+  ++DL  +L +             L+R+L+AR++++ K+  M        
Sbjct: 12  QQEALARFRETLQDLLPTLPKADDYF--------LLRWLRARNFDLKKSEDMLRKHVEFR 63

Query: 55  -----KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQM 109
                  IL  +    ++     G+SGY  EG PV    +G  T D   + +   S   M
Sbjct: 64  NQQNLDQILTWQAPEVIQLYDSGGLSGYDYEGCPVWFDIIG--TMDPKGL-FMSASKQDM 120

Query: 110 NEYRDRVV------LPSASKKHGRYIGTSLKVLDMTGLKLSALNQ--IKLMTVITTIDDL 161
              R +V           S+K GR I   + V DM GL L  L +  +++      I + 
Sbjct: 121 IRKRIKVCEMLLHECELQSQKLGRKIERMVMVFDMEGLSLRHLWKPAVEVYQQFFAILEA 180

Query: 162 NYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLP 219
           NYPE  +   I+ AP +F   + +VK  + E T++K+ +L GN + EL+K +    LP
Sbjct: 181 NYPETVKNLIIIRAPKLFPVAFNLVKSFMGEETQKKIVILGGNWKQELVKFVSPDQLP 238

Probable hydrophobic ligand-binding protein; may play a role in the transport of hydrophobic ligands like tocopherol, squalene and phospholipids.

Mus musculus (taxid: 10090)

>sp|P45816|SEC14_YARLI SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2

 Score = 69.3 bits (168), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 28/222 (12%)

Query: 36  TLVRFLKARDWNVSKAHKM-------------KPILPAELYRAVRDSQLVGVSGY---SK 79
           TL+RFL+AR ++V  A +M               IL    Y+  ++   +    Y    K
Sbjct: 56  TLLRFLRARKFDVPLAQEMWENCEKWRKEFGTNTILEDFWYKEKKEVAKLYPQYYHKTDK 115

Query: 80  EGLPVIAVGVG-LSTHDKASVNYYVQSHIQMN---EYRD--RVVLPSASKKHGRYIGTSL 133
           +G PV    VG ++ H+   +    Q  +  N   EY    R  LP+ S+  G  I TS 
Sbjct: 116 DGRPVYVENVGKVNIHEMYKIT--TQERMLRNLVWEYESFVRHRLPACSRVVGHLIETSC 173

Query: 134 KVLDMTGLKLSALNQI-KLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQE 192
            +LD+ G+ LS+ +Q+   +   + I    YPE+   +Y++NAP+ FS  + V+K  L  
Sbjct: 174 TILDLKGVSLSSASQVYGFLKDASNIGQNYYPERMGKFYLINAPFGFSTVFSVIKRFLDP 233

Query: 193 RTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIG 234
            T  K+ V   N +++LL  +   +LP    K G  SS  IG
Sbjct: 234 VTVSKIHVYGSNYKEKLLAQVPAYNLP---IKFGGQSSSKIG 272

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 52/252 (20%)

Query: 3   HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAEL 62
            +E + QF++++  L+ + KE   +        TL+RFL+AR ++++ + +M   +  E 
Sbjct: 29  QEEALLQFRSIL--LEKNYKERLDD-------STLLRFLRARKFDINASVEM--FVETER 77

Query: 63  YRA----------------VRDSQLVGVSGY--------SKEGLPVIAV---GVGLS--- 92
           +R                   D + + ++           K+G P+      G+ L    
Sbjct: 78  WREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFEELGGINLKKMY 137

Query: 93  --THDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIK 150
             T +K  +   V+ +     YR    +P+ S++ G  I TS  VLD+ G+ LS  N   
Sbjct: 138 KITTEKQMLRNLVKEYELFATYR----VPACSRRAGYLIETSCTVLDLKGISLS--NAYH 191

Query: 151 LMTVITTIDDLN---YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRD 207
           +++ I  + D++   YPE+   +YI+++P+ FS  +K+VKP L   T  K+ +L  + + 
Sbjct: 192 VLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKK 251

Query: 208 ELLKIMDYASLP 219
           ELLK +   +LP
Sbjct: 252 ELLKQIPIENLP 263

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P58875|S14L2_BOVIN SEC14-like protein 2 OS=Bos taurus GN=SEC14L2 PE=1 SV=2

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 119/266 (44%), Gaps = 29/266 (10%)

Query: 32  NPTDT-LVRFLKARDWNVSKAHKM-------------KPILPAELYRAVRDSQLVGVSGY 77
           NP D  L+R+L+AR++N+ K+  M               I+  +    V+     G+ GY
Sbjct: 32  NPDDYFLLRWLRARNFNLQKSEAMLRKHVEFRKQKDIDNIMSWQPPEVVQQYLSGGMCGY 91

Query: 78  SKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSA----SKKHGRYIGTSL 133
             EG P+    +G     K  +    +  +   + RD  +L       ++K G+ I  + 
Sbjct: 92  DLEGSPIWYDIIG-PLDAKGLLLSASKQDLFKTKMRDCELLLQECVRQTEKMGKKIEATT 150

Query: 134 KVLDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQ 191
            + D  GL L  L +  ++       + + NYPE  +  +IV AP +F   + +VKP L 
Sbjct: 151 LIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFIVKAPKLFPVAYNLVKPFLS 210

Query: 192 ERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQR 251
           E TR+K+QVL  N ++ LLK +    LP    + G   +   GN   ++  +      ++
Sbjct: 211 EDTRKKIQVLGANWKEVLLKYISPDQLP---VEYGGTMTDPDGNPKCKSKINYGGDIPKK 267

Query: 252 LY--NYIKQQAVLTESVVPIRQGSFH 275
            Y  + +KQQ    E  V I +GS H
Sbjct: 268 YYVRDQVKQQ---YEHSVQISRGSSH 290

Carrier protein. Binds to some hydrophobic molecules and promotes their transfer between the different cellular sites. Binds with high affinity to alpha-tocopherol. Also binds with a weaker affinity to other tocopherols and to tocotrienols. May have a transcriptional activatory activity via its association with alpha-tocopherol. Probably recognizes and binds some squalene structure, suggesting that it may regulate cholesterol biosynthesis by increasing the transfer of squalene to a metabolic active pool in the cell.

Bos taurus (taxid: 9913)

>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 32/236 (13%)

Query: 13  LMEDLDDSLKETFKNVHQGNPT-----DTLVRFLKARDWNVSKAHKMKPILPAELYRAVR 67
           L  + + +L+E  K + Q   T      TL+RFL+AR ++V+ A  M      E +R   
Sbjct: 27  LTSEHEAALEELRKVLKQAGFTKRLDDSTLLRFLRARKFDVAAARAM--FENCEKWRKEN 84

Query: 68  DSQLVGVSGYSKEGLPVIAVGVGLSTH--DKASVNYYVQSHIQMN--------------- 110
               +    +  E  P++A       H  DK     Y++    +N               
Sbjct: 85  GVDTI-FEDFHYEEKPLVAKFYPQYYHKTDKDGRPVYIEELGAVNLTEMYKITTQERMLK 143

Query: 111 ----EYRD--RVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQI-KLMTVITTIDDLNY 163
               EY    R  LP++S++    + TS  +LD+ G+ +SA  Q+   +   + I    Y
Sbjct: 144 NLIWEYESFSRYRLPASSRQADCLVETSCTILDLKGISISAAAQVLSYVREASNIGQNYY 203

Query: 164 PEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLP 219
           PE+   +Y++NAP+ FSA +++ KP L   T  K+ +L  + + ELLK +   +LP
Sbjct: 204 PERMGKFYMINAPFGFSAAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP 259

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q03606|YN02_CAEEL CRAL-TRIO domain-containing protein T23G5.2 OS=Caenorhabditis elegans GN=T23G5.2 PE=4 SV=3

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 42/305 (13%)

Query: 5   EEIKQFQTLMEDLDDS----LKETFKNVHQGN-PTDT-LVRFLKARDWNVSKA------- 51
           E I++F   +  L++S    +K + +  H+G  P D  L+RFL+ARD++V+KA       
Sbjct: 242 EYIRRFLGQLSPLEESRLCEIKYSLQAHHKGKLPNDAHLLRFLRARDFDVAKAKDMVHAS 301

Query: 52  ------HKMKPILPAELYRAVRDSQLVGVSGYS-KEGLPVIAVGVG-LSTHD---KASVN 100
                 H +  IL       V      G    S K G P+  +  G L T        V 
Sbjct: 302 IIWRKQHNVDKILEEWTRPTVIKQYFPGCWHNSDKAGRPMYILRFGQLDTKGMLRSCGVE 361

Query: 101 YYVQSHIQMNEYRDRVVLPS-ASKKHGRYIGTSLKVLDMTGLKLSALNQ--IKLMTVITT 157
             V+  + + E  D +   + A++K G  I +   V+D+ GL +  L +  ++ +  I  
Sbjct: 362 NLVKLTLSICE--DGLQRAAEATRKLGTPISSWSLVVDLDGLSMRHLWRPGVQCLLKIIE 419

Query: 158 IDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRD---ELLKIMD 214
           I + NYPE      +V AP +F   W ++ P + E+TR+K  V  G+G D   EL K ++
Sbjct: 420 IVEANYPETMGQVLVVRAPRVFPVLWTLISPFIDEKTRKKFMVSGGSGGDLKEELRKHIE 479

Query: 215 YASLPHF----CRKEGSGSSRHIGNGT------TENCFSLDHAFHQRLYNYIKQQAVLTE 264
              +P F    C     G   H+           E   S +   H    +    +    E
Sbjct: 480 EKFIPDFLGGSCLTTNCGLGGHVPKSMYLPVEEQEGASSSEDPLHSTYTSTATWRGYPVE 539

Query: 265 SVVPI 269
            V+PI
Sbjct: 540 VVIPI 544

Caenorhabditis elegans (taxid: 6239)

>sp|Q92503|S14L1_HUMAN SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 38/244 (15%)

Query: 13  LMEDLDDSLKETFKNVHQGN-PTDT-LVRFLKARDWNVSKA-------------HKMKPI 57
           L E     L++  +  H+G  P D  ++RFL+ARD+N+ KA             H++  I
Sbjct: 254 LQESCLIRLRQWLQETHKGKIPKDEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYI 313

Query: 58  LPAELY---RAVRDSQLVGVSGYSKEGLPVIAVGVG--------LSTHDKASVNYYVQSH 106
           L  E +   + ++D    G   + K+G P+  + +G         +  ++A + Y     
Sbjct: 314 L--ETWTPPQVLQDYYAGGWHHHDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYV---- 367

Query: 107 IQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQ--IKLMTVITTIDDLNYP 164
           + +NE   R      +K  GR I +   ++D+ GL +  L +  +K +  I  + + NYP
Sbjct: 368 LSINEEGLRRC-EENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYP 426

Query: 165 EKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGN---GRDELLKIMDYASLPHF 221
           E      I+ AP +F   W +V P + + TRRK  +  GN   G   LL  +D   +P F
Sbjct: 427 ETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDF 486

Query: 222 CRKE 225
              E
Sbjct: 487 LSGE 490

Homo sapiens (taxid: 9606)

>sp|Q9UDX3|S14L4_HUMAN SEC14-like protein 4 OS=Homo sapiens GN=SEC14L4 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 40/212 (18%)

Query: 37  LVRFLKARDWNVSKAHKM-------------------KPILPAELYRAVRDSQLVGVSGY 77
           L+R+L+AR++++ K+  M                   +P    +LY    DS   G+ GY
Sbjct: 38  LLRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQPPEVIQLY----DSG--GLCGY 91

Query: 78  SKEGLPVIAVGVGLSTHDK-----ASVNYYVQSHIQMNEYRDRVVLPSA---SKKHGRYI 129
             EG PV    +G S   K     AS    ++  I++ E    ++L      ++K GR I
Sbjct: 92  DYEGCPVYFNIIG-SLDPKGLLLSASKQDMIRKRIKVCE----LLLHECELQTQKLGRKI 146

Query: 130 GTSLKVLDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVK 187
             +L V DM GL L  L +  +++     +I + NYPE  +   ++ AP +F   + +VK
Sbjct: 147 EMALMVFDMEGLSLKHLWKPAVEVYQQFFSILEANYPETLKNLIVIRAPKLFPVAFNLVK 206

Query: 188 PLLQERTRRKMQVLQGNGRDELLKIMDYASLP 219
             + E TRRK+ +L  N + EL K +    LP
Sbjct: 207 SFMSEETRRKIVILGDNWKQELTKFISPDQLP 238

Probable hydrophobic ligand-binding protein; may play a role in the transport of hydrophobic ligands like tocopherol, squalene and phospholipids.

Homo sapiens (taxid: 9606)

>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3

 Score = 65.5 bits (158), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 58/253 (22%)

Query: 2   AHQEEIKQFQTLMED------LDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM- 54
           A ++ + + + L+ED      LDDS               TL+RFL+AR ++V  A +M 
Sbjct: 32  AQEKALAELRKLLEDAGFIERLDDS---------------TLLRFLRARKFDVQLAKEMF 76

Query: 55  -----------------------KPIL----PAELYRAVRDSQLVGVSGYSKEGLPVIAV 87
                                  KP++    P   ++  +D + V    Y +E   V   
Sbjct: 77  ENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPV----YFEELGAVNLH 132

Query: 88  GVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLS-AL 146
            +   T ++  +   V  +  + +YR    LP+ S+  G  + TS  ++D+ G+ +S A 
Sbjct: 133 EMNKVTSEERMLKNLVWEYESVVQYR----LPACSRAAGHLVETSCTIMDLKGISISSAY 188

Query: 147 NQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGR 206
           + +  +   + I    YPE+   +YI+NAP+ FS  +++ KP L   T  K+ +L  + +
Sbjct: 189 SVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQ 248

Query: 207 DELLKIMDYASLP 219
            ELLK +   +LP
Sbjct: 249 KELLKQIPAENLP 261

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro. Essential for viability and secretion.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
449461049	337	PREDICTED: SEC14 cytosolic factor-like [	1.0	0.937	0.721	1e-142
225461961	338	PREDICTED: SEC14-like protein 5 [Vitis v	0.996	0.931	0.739	1e-142
224061236	337	predicted protein [Populus trichocarpa]	0.990	0.928	0.712	1e-140
147822313	338	hypothetical protein VITISV_000011 [Viti	0.996	0.931	0.730	1e-138
356527167	338	PREDICTED: SEC14 cytosolic factor-like [	0.993	0.928	0.689	1e-136
356566393	410	PREDICTED: SEC14 cytosolic factor-like [	0.981	0.756	0.688	1e-134
255579158	336	SEC14 cytosolic factor, putative [Ricinu	0.984	0.925	0.690	1e-134
297847948	325	SEC14 cytosolic factor [Arabidopsis lyra	0.952	0.926	0.699	1e-134
15222786	325	sec.4-like phosphatidylinositol transfer	0.952	0.926	0.699	1e-132
224086324	345	predicted protein [Populus trichocarpa]	0.984	0.901	0.684	1e-131

>gi|449461049|ref|XP_004148256.1| PREDICTED: SEC14 cytosolic factor-like [Cucumis sativus] gi|449523143|ref|XP_004168584.1| PREDICTED: SEC14 cytosolic factor-like [Cucumis sativus]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/334 (72%), Positives = 280/334 (83%), Gaps = 18/334 (5%)

Query: 1   MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM------ 54
           +A++E +KQFQ LME++D SLK TF+ +HQG+P +TL RFLKARDWN++KAHKM      
Sbjct: 3   IANREAMKQFQLLMEEVDGSLKNTFEIMHQGHPAETLERFLKARDWNLAKAHKMLIDCLH 62

Query: 55  ------------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYY 102
                       KPI+P ELYRAVRDSQLVG+SGYSKEGLPVIAVGVG ST DKASV+YY
Sbjct: 63  WRIQNEIDNILAKPIIPTELYRAVRDSQLVGLSGYSKEGLPVIAVGVGQSTFDKASVHYY 122

Query: 103 VQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLN 162
           VQSHIQMNEYRDRVVLP+A+KKHGR+I T LKVLDMTGLKLSALNQIKL+TVI+TIDDLN
Sbjct: 123 VQSHIQMNEYRDRVVLPAATKKHGRHISTCLKVLDMTGLKLSALNQIKLLTVISTIDDLN 182

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
           YPEKT+TYYIVN PY+FSACWKVVKPLLQERTR+K+QVLQ  GRDELLKIMDYASLPHFC
Sbjct: 183 YPEKTDTYYIVNVPYVFSACWKVVKPLLQERTRKKIQVLQNCGRDELLKIMDYASLPHFC 242

Query: 223 RKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPD 282
           RKE SGSSR + NG  ENCFS D AFHQ+LYNY++QQ  + E +VPI+QGSFHVDFPEPD
Sbjct: 243 RKERSGSSRRVENGNAENCFSFDTAFHQQLYNYVQQQGAVREPIVPIKQGSFHVDFPEPD 302

Query: 283 PEGAKITKKIESEFHRIGDKNGLINSLNGLKVDG 316
           P   +I K IE+EFH++ + N L  S+NGL+V+G
Sbjct: 303 PRDVEIAKTIETEFHKLENHNALNYSMNGLQVNG 336

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461961|ref|XP_002270197.1| PREDICTED: SEC14-like protein 5 [Vitis vinifera] gi|296089941|emb|CBI39760.3| unnamed protein product [Vitis vinifera]

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/334 (73%), Positives = 279/334 (83%), Gaps = 19/334 (5%)

Query: 1   MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM------ 54
           + +QE +KQ Q L+++++++LK +F+NVHQG   +TL RFLKARD NV KAHKM      
Sbjct: 3   IVNQEAVKQLQLLLDEVEETLKNSFENVHQGYVRETLARFLKARDGNVPKAHKMLVDCLN 62

Query: 55  ------------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYY 102
                       KPILP  LYRAVRDSQL G+SGY+KEGLPVIAVGVG ST DKASV+YY
Sbjct: 63  WRIQNEIDNILTKPILPPNLYRAVRDSQLTGLSGYTKEGLPVIAVGVGQSTFDKASVHYY 122

Query: 103 VQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLN 162
           VQSHIQMNEYRDRVVLP+A+KKHGRYIGT +KVLDMTGLKLSALNQIKL+TVI+TIDDLN
Sbjct: 123 VQSHIQMNEYRDRVVLPAATKKHGRYIGTCVKVLDMTGLKLSALNQIKLLTVISTIDDLN 182

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
           YPEKT+TYYIVN PYIFSACWKVVKPLLQERTRRK+QVLQG GRDELLKIMDYASLPHFC
Sbjct: 183 YPEKTDTYYIVNVPYIFSACWKVVKPLLQERTRRKVQVLQGCGRDELLKIMDYASLPHFC 242

Query: 223 RKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPD 282
           R+EGSGSS H  NGTT+NCF LDH FHQ +YNY+ QQA L ESV P +QGSFHV FPEPD
Sbjct: 243 RREGSGSSHHSENGTTDNCFCLDHVFHQHVYNYVNQQAALVESVGPWKQGSFHVAFPEPD 302

Query: 283 PEGAKITKKIESEFHRIGD-KNGLINSLNGLKVD 315
           PEG KI K IESEFH+IGD KNGL NS++ LKV+
Sbjct: 303 PEGKKIAKTIESEFHKIGDHKNGLSNSMSNLKVN 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061236|ref|XP_002300384.1| predicted protein [Populus trichocarpa] gi|222847642|gb|EEE85189.1| predicted protein [Populus trichocarpa]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/334 (71%), Positives = 286/334 (85%), Gaps = 21/334 (6%)

Query: 2   AHQEE-IKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM------ 54
           A+Q++ IKQ Q++M+ +D+S+K T++N+HQG PT+TLVRFLKARDWNV+KAHKM      
Sbjct: 5   ANQDQAIKQLQSIMDQIDESMKNTYQNMHQGYPTETLVRFLKARDWNVAKAHKMLVDCLE 64

Query: 55  ------------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYY 102
                       KPI+P+ LYRAVRDSQL+G+SGYSKEGLP+I +G GLST DKASV+YY
Sbjct: 65  WRIQNKIDDMLAKPIIPSNLYRAVRDSQLLGLSGYSKEGLPIITIGAGLSTFDKASVHYY 124

Query: 103 VQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLN 162
           VQSHIQ+NEYRDRV+LP+A+KK+GR+I T LKVLDMTGLKLSALN +KL+T ++TIDDLN
Sbjct: 125 VQSHIQINEYRDRVILPTATKKYGRHISTCLKVLDMTGLKLSALNHLKLLTTMSTIDDLN 184

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
           YPEKTETYYIVNAPYIFSACWKVVKPLLQERTR+K+QVLQG GRDELLKIMDY+SLPHFC
Sbjct: 185 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRKKIQVLQGCGRDELLKIMDYSSLPHFC 244

Query: 223 RKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPD 282
           RKEGSGSS++  +G+  NCFS DHAFHQ+LY+YIKQQA L +S+ PI+QGS HV FP+PD
Sbjct: 245 RKEGSGSSKNTEDGS--NCFSPDHAFHQQLYSYIKQQAELLDSISPIKQGSVHVGFPDPD 302

Query: 283 PEGAKITKKIESEFHRIGDKNGLINSLNGLKVDG 316
           PE AKI + IESEFHR+ + NGL NS+NGLKVDG
Sbjct: 303 PEDAKIARTIESEFHRLRNLNGLSNSVNGLKVDG 336

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147822313|emb|CAN64059.1| hypothetical protein VITISV_000011 [Vitis vinifera]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/334 (73%), Positives = 274/334 (82%), Gaps = 19/334 (5%)

Query: 1   MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM------ 54
           + +QE +KQ Q L++++++ LK +F NVHQG   +TL RFLKARD NV KAHKM      
Sbjct: 3   IVNQEAVKQXQLLLDEVEEPLKNSFXNVHQGYVRETLARFLKARDGNVPKAHKMLVDCLN 62

Query: 55  ------------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYY 102
                       KPILP  LYRAVRDSQL G+SGY+KEGLPVIAVGVG ST DKASV+YY
Sbjct: 63  WRIQNEIDNILVKPILPPNLYRAVRDSQLTGLSGYTKEGLPVIAVGVGQSTFDKASVHYY 122

Query: 103 VQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLN 162
           VQSHIQMNEYRDRVVLP+A+KK GRYIGT +KVLDMTGLKLSALNQIKL+TVI+TIDDLN
Sbjct: 123 VQSHIQMNEYRDRVVLPAATKKXGRYIGTCVKVLDMTGLKLSALNQIKLLTVISTIDDLN 182

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
           YPEKT+TYYIVN PYIFSACWKVVKPLLQERTRRK+QVLQG GRDELLKIMDYASLPHF 
Sbjct: 183 YPEKTDTYYIVNVPYIFSACWKVVKPLLQERTRRKVQVLQGCGRDELLKIMDYASLPHFX 242

Query: 223 RKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPD 282
           R+EGSGSS H  NGTT+NCF LDH FHQ +YNY+ QQA L ES  P +QGSFHV FPEPD
Sbjct: 243 RREGSGSSHHSENGTTDNCFCLDHVFHQHVYNYVNQQAALXESXGPWKQGSFHVAFPEPD 302

Query: 283 PEGAKITKKIESEFHRIGD-KNGLINSLNGLKVD 315
           PEG KI K IESEFH+IGD KNGL NS++ LKV+
Sbjct: 303 PEGKKIAKTIESEFHKIGDHKNGLSNSMSNLKVN 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527167|ref|XP_003532184.1| PREDICTED: SEC14 cytosolic factor-like [Glycine max]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 231/335 (68%), Positives = 279/335 (83%), Gaps = 21/335 (6%)

Query: 2   AHQEEIKQFQTLMEDLDDS-LKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM------ 54
            +QE +KQ QTLME++DD  LK TF+ +HQG  T+TL+RFLKARDWN++KAHKM      
Sbjct: 4   GNQEAVKQLQTLMENVDDEQLKNTFQIMHQGYQTETLIRFLKARDWNIAKAHKMLIDCLN 63

Query: 55  ------------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYY 102
                       KPI P +LYRA+RDSQL+G+SGYSKEGLPVIAVGVGLST+DKAS  YY
Sbjct: 64  WRVENEIDNVLRKPI-PMDLYRAIRDSQLIGMSGYSKEGLPVIAVGVGLSTYDKASDKYY 122

Query: 103 VQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLN 162
           +QSHIQ+NEYRD+V+LP+A++KHGRYIGT +KVLDMTGLK SALNQ++L+T I+TIDDLN
Sbjct: 123 IQSHIQLNEYRDQVILPTATRKHGRYIGTCVKVLDMTGLKFSALNQLRLLTAISTIDDLN 182

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
           YPEKT+TYYIVN PY+FSACWKVVKPLLQERTRRK+QVLQG G++ELLK+MDYASLPHFC
Sbjct: 183 YPEKTDTYYIVNVPYVFSACWKVVKPLLQERTRRKIQVLQGCGKEELLKVMDYASLPHFC 242

Query: 223 RKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPD 282
           RKE S SS+H   G   NCFS +HAFHQ+LYN+IKQQ+++ ES+ PIRQGSF+VD PEPD
Sbjct: 243 RKEDSKSSKHHALGNIGNCFSFNHAFHQQLYNHIKQQSIIVESISPIRQGSFYVDIPEPD 302

Query: 283 PEGAKITKKIESEFHRI-GDKNGLINSLNGLKVDG 316
           P+ AKI K IE+EFH++   KNG  NSLNGL+V+G
Sbjct: 303 PDDAKIAKTIETEFHKLENQKNGFTNSLNGLRVNG 337

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566393|ref|XP_003551416.1| PREDICTED: SEC14 cytosolic factor-like [Glycine max]

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/331 (68%), Positives = 276/331 (83%), Gaps = 21/331 (6%)

Query: 2   AHQEEIKQFQTLMEDLDDS-LKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM------ 54
            +QE +KQ QTLME++DD  LK TF+ +HQG  T+TL+RFLKARDW+V+KAHKM      
Sbjct: 4   GNQEAVKQLQTLMENVDDEQLKNTFQIMHQGYQTETLIRFLKARDWSVAKAHKMLIDCLN 63

Query: 55  ------------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYY 102
                       KPI P +LY+A+RDSQL+G+SGYSKE LPVIAVGVGLST+DKAS  YY
Sbjct: 64  WRVENEIDNVLRKPI-PTDLYKAIRDSQLIGMSGYSKEDLPVIAVGVGLSTYDKASDKYY 122

Query: 103 VQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLN 162
           +QSHIQ+NEYRDRV+LP+A++KHGRYIGT +KVLDM+GLK SALNQ++L+T I+TIDDLN
Sbjct: 123 IQSHIQLNEYRDRVILPTATRKHGRYIGTCVKVLDMSGLKFSALNQLRLLTAISTIDDLN 182

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
           YPEKT+TYYIVNAPY+FSACWKVVKPLLQERTRRK+QVLQG G++ELL++MDYASLPHFC
Sbjct: 183 YPEKTDTYYIVNAPYVFSACWKVVKPLLQERTRRKIQVLQGCGKEELLRVMDYASLPHFC 242

Query: 223 RKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPD 282
           RKE S SS+H  +G +ENCFS +HAFHQ+LYN+IKQQA++ ES+ PIRQGSF VD PEPD
Sbjct: 243 RKEDSKSSKHHASGNSENCFSFNHAFHQQLYNHIKQQAIIMESISPIRQGSFCVDIPEPD 302

Query: 283 PEGAKITKKIESEFHRI-GDKNGLINSLNGL 312
           P+ AKI K IE+EFH++   KNG  NSL GL
Sbjct: 303 PDDAKIAKTIENEFHKLENQKNGFTNSLTGL 333

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579158|ref|XP_002530426.1| SEC14 cytosolic factor, putative [Ricinus communis] gi|223530034|gb|EEF31957.1| SEC14 cytosolic factor, putative [Ricinus communis]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/330 (69%), Positives = 276/330 (83%), Gaps = 19/330 (5%)

Query: 4   QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM--------- 54
           +E + QF+ LM+ +++SL++T++NVHQG  T+TLVRFLKAR+WNV+KAHKM         
Sbjct: 6   EEAVNQFRELMDQVEESLQKTYQNVHQGCQTETLVRFLKAREWNVTKAHKMLVDCLHWRI 65

Query: 55  ---------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQS 105
                    KPI+P +LYRAVRDSQL+G+SGYS+EGLPV A+GVGLST DKASV+YYVQS
Sbjct: 66  QNEIDNILTKPIIPTDLYRAVRDSQLIGMSGYSREGLPVFAIGVGLSTFDKASVHYYVQS 125

Query: 106 HIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPE 165
           HIQ+NEYRDRV+LPSASKKHGR I T +KVLDMTGLKLSAL+QIKL+T+I+TIDDLNYPE
Sbjct: 126 HIQINEYRDRVILPSASKKHGRSITTCVKVLDMTGLKLSALSQIKLLTIISTIDDLNYPE 185

Query: 166 KTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKE 225
           KT+TYYIVNAPYIFSACWKVVKPLLQERTR+K+QVL GNGRDELLKIMD+ASLPHFCR+E
Sbjct: 186 KTKTYYIVNAPYIFSACWKVVKPLLQERTRKKVQVLSGNGRDELLKIMDFASLPHFCRRE 245

Query: 226 GSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPDPEG 285
           GSGSSRH+ +   ENCFSLDH FHQ+LY+YIKQQ+++ E   PI+QGSFHVD PEP  EG
Sbjct: 246 GSGSSRHL-DYAAENCFSLDHPFHQQLYDYIKQQSLVKEPAQPIKQGSFHVDLPEPGAEG 304

Query: 286 AKITKKIESEFHRIGDKNGLINSLNGLKVD 315
            +I K +ESE  +  + NGL  S+N LK++
Sbjct: 305 TEIAKTLESELQKFENGNGLSRSINDLKIN 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847948|ref|XP_002891855.1| SEC14 cytosolic factor [Arabidopsis lyrata subsp. lyrata] gi|297337697|gb|EFH68114.1| SEC14 cytosolic factor [Arabidopsis lyrata subsp. lyrata]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 223/319 (69%), Positives = 266/319 (83%), Gaps = 18/319 (5%)

Query: 1   MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM------ 54
           + ++E +KQ + LMED+DDSL+E+++N+HQG  T+TL RFLKARDWNV KAHKM      
Sbjct: 3   ITNEEAVKQLRALMEDVDDSLRESYRNIHQGYTTETLSRFLKARDWNVQKAHKMLLECLE 62

Query: 55  ------------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYY 102
                       KPI+P +LYRA+RD+QLVGVSGYSKEGLPVIA+GVGLST+DKASV+YY
Sbjct: 63  WRTQNEIDKILAKPIVPVDLYRAIRDTQLVGVSGYSKEGLPVIAIGVGLSTYDKASVHYY 122

Query: 103 VQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLN 162
           +QSHIQMNEYRDRVVLPSA+KK GR I T LK+LDM+GLKLSAL+QIKLMT ITTIDDLN
Sbjct: 123 IQSHIQMNEYRDRVVLPSATKKQGRPICTCLKILDMSGLKLSALSQIKLMTAITTIDDLN 182

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
           YPEKTETYY+VN PYIFSACWK +KPLLQERT++K+QVL+G G+DELLKIMDY SLPHFC
Sbjct: 183 YPEKTETYYVVNVPYIFSACWKTIKPLLQERTKKKIQVLKGCGKDELLKIMDYESLPHFC 242

Query: 223 RKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPD 282
           R+EGSGS RHI NGT +NCFSLDH+FHQ LY+Y+KQQA++  S  PIR GS HV FPEPD
Sbjct: 243 RREGSGSGRHITNGTVDNCFSLDHSFHQDLYDYVKQQALVKGSSAPIRHGSVHVKFPEPD 302

Query: 283 PEGAKITKKIESEFHRIGD 301
            EG KI   +E+EF ++G+
Sbjct: 303 TEGNKIFDTLETEFQKLGN 321

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15222786|ref|NP_175980.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] gi|16930447|gb|AAL31909.1|AF419577_1 At1g55840/F14J16_2 [Arabidopsis thaliana] gi|19310517|gb|AAL84992.1| At1g55840/F14J16_2 [Arabidopsis thaliana] gi|332195185|gb|AEE33306.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana]

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 223/319 (69%), Positives = 265/319 (83%), Gaps = 18/319 (5%)

Query: 1   MAHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM------ 54
           + ++E +KQ + LMED+DDSL+E+++N+HQG PT+ L+RFLKARD NV KAHKM      
Sbjct: 3   ITNEEAVKQLRALMEDVDDSLRESYRNIHQGYPTENLLRFLKARDGNVQKAHKMLLECLE 62

Query: 55  ------------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYY 102
                       KPI+P +LYR +RD+QLVGVSGYSKEGLPVIA+GVGLST+DKASV+YY
Sbjct: 63  WRTQNEIDKILTKPIVPVDLYRGIRDTQLVGVSGYSKEGLPVIAIGVGLSTYDKASVHYY 122

Query: 103 VQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLN 162
           VQSHIQMNEYRDRVVLPSASKK GR I T LK+LDM+GLKLSAL+QIKLMT ITTIDDLN
Sbjct: 123 VQSHIQMNEYRDRVVLPSASKKQGRPICTCLKILDMSGLKLSALSQIKLMTAITTIDDLN 182

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
           YPEKTETYY+VN PYIFSACWK +KPLLQERT++K+QVL+G G+DELLKIMDY SLPHFC
Sbjct: 183 YPEKTETYYVVNVPYIFSACWKTIKPLLQERTKKKIQVLKGCGKDELLKIMDYESLPHFC 242

Query: 223 RKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPD 282
           R+EGSGS RHI NGT +NCFSLDH+FHQ LY+Y+KQQA++  S  PIR GS HV FPEPD
Sbjct: 243 RREGSGSGRHISNGTVDNCFSLDHSFHQDLYDYVKQQALVKGSGAPIRHGSVHVKFPEPD 302

Query: 283 PEGAKITKKIESEFHRIGD 301
            EG KI   +E+EF ++G+
Sbjct: 303 TEGNKIFDTLENEFQKLGN 321

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086324|ref|XP_002307849.1| predicted protein [Populus trichocarpa] gi|222853825|gb|EEE91372.1| predicted protein [Populus trichocarpa]

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/330 (68%), Positives = 268/330 (81%), Gaps = 19/330 (5%)

Query: 4   QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM--------- 54
            + I QF+ LM+ +++ LK  ++NVHQG   +TL RFLKAR+WN+ KAHKM         
Sbjct: 6   HDAINQFKALMDQVEEPLKRAYQNVHQGYHAETLARFLKAREWNLIKAHKMLVDCLHWRV 65

Query: 55  ---------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQS 105
                    KPI+PA+LYRAVRDSQL+G+SGYS+EGLPV A GVGLST DKASV+YYVQS
Sbjct: 66  QNEIDNILTKPIIPADLYRAVRDSQLIGMSGYSREGLPVFAHGVGLSTFDKASVHYYVQS 125

Query: 106 HIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPE 165
           HIQ+NEYRDR+VLP+ASKK+GR I T +KVLDMTGLKLSALNQIKLMT+I+TIDD+NYPE
Sbjct: 126 HIQINEYRDRIVLPTASKKYGRPITTCVKVLDMTGLKLSALNQIKLMTIISTIDDMNYPE 185

Query: 166 KTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKE 225
           KT TYYIVNAPYIFSACWKVVKPLLQERTR+K+QVL GNGRDELLKIMD ASLPHFC++E
Sbjct: 186 KTNTYYIVNAPYIFSACWKVVKPLLQERTRKKVQVLSGNGRDELLKIMDAASLPHFCKRE 245

Query: 226 GSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPDPEG 285
           GSGSSRH      ENCFSLDH FHQ+LYNYIKQQ++++E   PI+QGS HVD PEP  EG
Sbjct: 246 GSGSSRH-SEYANENCFSLDHPFHQQLYNYIKQQSLVSEPTQPIKQGSVHVDLPEPAAEG 304

Query: 286 AKITKKIESEFHRIGDKNGLINSLNGLKVD 315
            +I K IESE H++ + NGL  SL+GLK++
Sbjct: 305 TEIVKTIESEMHKLENGNGLSGSLDGLKIN 334

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
TAIR|locus:2012040	325	AT1G55840 "AT1G55840" [Arabido	0.876	0.852	0.7	1.3e-122
TAIR|locus:2160892	341	AT5G47730 "AT5G47730" [Arabido	0.936	0.868	0.637	1.6e-95
TAIR|locus:2115265	543	SFH12 "AT4G36490" [Arabidopsis	0.683	0.397	0.287	1e-13
TAIR|locus:2139564	554	COW1 "CAN OF WORMS1" [Arabidop	0.518	0.296	0.298	5.1e-13
TAIR|locus:2136303	554	SEC14 "SECRETION 14" [Arabidop	0.471	0.268	0.329	8e-13
TAIR|locus:2053114	558	AT2G18180 "AT2G18180" [Arabido	0.471	0.267	0.316	5.1e-12
TAIR|locus:2042634	547	AT2G16380 [Arabidopsis thalian	0.471	0.272	0.290	7.4e-12
TAIR|locus:2049319	548	SFH3 "SEC14-like 3" [Arabidops	0.471	0.271	0.309	1e-11
CGD|CAL0003685	301	SEC14 [Candida albicans (taxid	0.512	0.538	0.309	1.2e-11
UNIPROTKB|P46250	301	SEC14 "SEC14 cytosolic factor"	0.512	0.538	0.309	1.2e-11

TAIR|locus:2012040 AT1G55840 "AT1G55840" [Arabidopsis thaliana (taxid:3702)]

 Score = 1035 (369.4 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
 Identities = 196/280 (70%), Positives = 230/280 (82%)

Query:    25 FKNVHQGNPTDTLVRFLKARDWNV-SKAHKM--KPILPAELYRAVRDSQLVGVSGYSKEG 81
             F     GN        L+  +W   ++  K+  KPI+P +LYR +RD+QLVGVSGYSKEG
Sbjct:    42 FLKARDGNVQKAHKMLLECLEWRTQNEIDKILTKPIVPVDLYRGIRDTQLVGVSGYSKEG 101

Query:    82 LPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGL 141
             LPVIA+GVGLST+DKASV+YYVQSHIQMNEYRDRVVLPSASKK GR I T LK+LDM+GL
Sbjct:   102 LPVIAIGVGLSTYDKASVHYYVQSHIQMNEYRDRVVLPSASKKQGRPICTCLKILDMSGL 161

Query:   142 KLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVL 201
             KLSAL+QIKLMT ITTIDDLNYPEKTETYY+VN PYIFSACWK +KPLLQERT++K+QVL
Sbjct:   162 KLSALSQIKLMTAITTIDDLNYPEKTETYYVVNVPYIFSACWKTIKPLLQERTKKKIQVL 221

Query:   202 QGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAV 261
             +G G+DELLKIMDY SLPHFCR+EGSGS RHI NGT +NCFSLDH+FHQ LY+Y+KQQA+
Sbjct:   222 KGCGKDELLKIMDYESLPHFCRREGSGSGRHISNGTVDNCFSLDHSFHQDLYDYVKQQAL 281

Query:   262 LTESVVPIRQGSFHVDFPEPDPEGAKITKKIESEFHRIGD 301
             +  S  PIR GS HV FPEPD EG KI   +E+EF ++G+
Sbjct:   282 VKGSGAPIRHGSVHVKFPEPDTEGNKIFDTLENEFQKLGN 321

GO:0005215 "transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006810 "transport" evidence=ISS

TAIR|locus:2160892 AT5G47730 "AT5G47730" [Arabidopsis thaliana (taxid:3702)]

 Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
 Identities = 192/301 (63%), Positives = 227/301 (75%)

Query:    13 LMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAELYRAVRDSQLV 72
             L E+L   LK    NV + +    LV  L+ R  N   +   KPI+P ELYR VRDSQL+
Sbjct:    35 LRENLGRFLKARDWNVCKAHTM--LVECLRWRVDNEIDSILSKPIVPTELYRDVRDSQLI 92

Query:    73 GVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTS 132
             G+SGY+KEGLPV A+GVGLST DKASV+YYVQSHIQ+NEYRDRV+LPS SKK+GR I T 
Sbjct:    93 GMSGYTKEGLPVFAIGVGLSTFDKASVHYYVQSHIQINEYRDRVLLPSISKKNGRPITTC 152

Query:   133 LKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQE 192
             +KVLDMTGLKLSAL+QIKL+T+I+TIDDLNYPEKT TYY+VNAPYIFSACWKVVKPLLQE
Sbjct:   153 VKVLDMTGLKLSALSQIKLVTIISTIDDLNYPEKTNTYYVVNAPYIFSACWKVVKPLLQE 212

Query:   193 RTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRL 252
             RTR+K+ VL G GRDELLKIMD+ SLPHFCR   SGSS H  +    NCFS++H FHQ+L
Sbjct:   213 RTRKKVHVLSGCGRDELLKIMDFTSLPHFCRSGSSGSSHHTQSA---NCFSINHPFHQQL 269

Query:   253 YNYIKQQAVLTESVVPIRQGSFHVDFPEPDPEGAKITKKIESEFHRIGDKNGLINSLNGL 312
             YNY+K          P +QGSFHV FPEP+ E   I K IESE H+  ++NGL  S++  
Sbjct:   270 YNYVKHHYETQGQAEPAKQGSFHVGFPEPEAERCVIAKTIESELHKFENRNGLAVSIDDR 329

Query:   313 K 313
             K
Sbjct:   330 K 330

GO:0005215 "transporter activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006810 "transport" evidence=ISS

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2115265 SFH12 "AT4G36490" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
 Identities = 67/233 (28%), Positives = 100/233 (42%)

Query:    73 GVSGYSKEGLPVIAVGVGLSTHDK----ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
             G  G  KEG PV    +GL    K     +++ YV  H+   E    V  P+ S    ++
Sbjct:   131 GHHGVDKEGRPVYIERLGLVDSTKLMQVTTMDRYVNYHVMEFERTFNVKFPACSIAAKKH 190

Query:   129 IGTSLKVLDMTGLKLSALNQIK--LMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV 186
             I  S  +LD+ G+ L   N+    L+T +  +D  NYPE     +I+NA   F   W  V
Sbjct:   191 IDQSTTILDVQGVGLKNFNKAARDLITRLQKVDGDNYPETLNRMFIINAGSGFRMLWNTV 250

Query:   187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF----CRKEGSGSSRHIGNGTTENCF 242
             K  L  +T  K+ VL    + +LL+I+D + LP F    C    +G       G  +N  
Sbjct:   251 KSFLDPKTTAKIHVLGNKYQSKLLEIIDESELPEFLGGSCTCADNGGCMRSDKGPWKNPE 310

Query:   243 SLDHAFHQRLYNYIK-QQAVLT-ESVVPIRQGSFHVDFPEPDPEGAKITKKIE 293
              +    H   +   K  QA  + E  +P    S      EP  E  K +K++E
Sbjct:   311 IMKRV-HNGDHKCSKGSQAENSGEKTIPEEDDST----TEPASEEEKASKEVE 358

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

GO:0008526 "phosphatidylinositol transporter activity" evidence=IGI

TAIR|locus:2139564 COW1 "CAN OF WORMS1" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
 Identities = 52/174 (29%), Positives = 81/174 (46%)

Query:    73 GVSGYSKEGLPVIAVGVGLSTHDK----ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
             G  G  KEG PV    +G    +K     +++ YV+ H++  E   +V  PS S    ++
Sbjct:   141 GYHGVDKEGRPVYIERLGQIDANKLLQVTTMDRYVKYHVKEFEKTFKVKFPSCSVAANKH 200

Query:   129 IGTSLKVLDMTGLKLSALNQI--KLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV 186
             I  S  +LD+ G+ L   ++   +L+  +  ID+ NYPE     +I+NA   F   W  V
Sbjct:   201 IDQSTTILDVQGVGLKNFSKSARELLQRLCKIDNENYPETLNRMFIINAGSGFRLLWSTV 260

Query:   187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF----CRKEGSGSSRHIGNG 236
             K  L  +T  K+ VL      +LL+++D + LP F    C  E  G       G
Sbjct:   261 KSFLDPKTTAKIHVLGNKYHSKLLEVIDASELPEFFGGACTCEDKGGCMRSDKG 314

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0008526 "phosphatidylinositol transporter activity" evidence=IGI

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0009932 "cell tip growth" evidence=IMP

GO:0010053 "root epidermal cell differentiation" evidence=IMP

TAIR|locus:2136303 SEC14 "SECRETION 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
 Identities = 51/155 (32%), Positives = 75/155 (48%)

Query:    73 GVSGYSKEGLPVIAVGVGLSTHDK----ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
             G  G  KEG P+    +G     K     +++ YV+ H++  E    V  P+ S    R+
Sbjct:   149 GYHGVDKEGRPIYIERLGQVDATKLMKVTTIDRYVKYHVKEFEKTFNVKFPACSIAAKRH 208

Query:   129 IGTSLKVLDMTGLKLSALNQIK--LMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV 186
             I  S  +LD+ G+ LS  N+    L+  I  ID+ NYPE     +I+NA   F   W  V
Sbjct:   209 IDQSTTILDVQGVGLSNFNKAAKDLLQSIQKIDNDNYPETLNRMFIINAGCGFRLLWNTV 268

Query:   187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
             K  L  +T  K+ VL    + +LL+I+D   LP F
Sbjct:   269 KSFLDPKTTAKIHVLGNKYQTKLLEIIDANELPEF 303

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0006656 "phosphatidylcholine biosynthetic process" evidence=TAS

GO:0008526 "phosphatidylinositol transporter activity" evidence=IGI

TAIR|locus:2053114 AT2G18180 "AT2G18180" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
 Identities = 49/155 (31%), Positives = 73/155 (47%)

Query:    73 GVSGYSKEGLPVIAVGVGLSTHDK----ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
             G  G  KEG PV    +G     K     +++ YV  H+   E    V  P+ S    ++
Sbjct:   134 GHHGVDKEGRPVYIERLGQVDSTKLMQVTTMDRYVNYHVMEFERTFNVKFPACSIAAKKH 193

Query:   129 IGTSLKVLDMTGLKLSALNQIK--LMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV 186
             I  S  +LD+ G+ L   N+    L+T +  +D  NYPE     +I+NA   F   W  V
Sbjct:   194 IDQSTTILDVQGVGLKNFNKAARDLITRLQKVDGDNYPETLNRMFIINAGSGFRMLWNTV 253

Query:   187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
             K  L  +T  K+ VL    + +LL+I+D + LP F
Sbjct:   254 KSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEF 288

GO:0005215 "transporter activity" evidence=ISS

GO:0006810 "transport" evidence=ISS

TAIR|locus:2042634 AT2G16380 [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 7.4e-12, Sum P(3) = 7.4e-12
 Identities = 45/155 (29%), Positives = 76/155 (49%)

Query:    73 GVSGYSKEGLPVIAVGVGLSTHDK----ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
             G  G  KEG PV    +G    +K     +++ Y + H++  E   ++  PS S    ++
Sbjct:   141 GYHGVDKEGRPVYIERLGQIDANKLLQATTMDRYEKYHVKEFEKMFKIKFPSCSAAAKKH 200

Query:   129 IGTSLKVLDMTGLKLSALNQI--KLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV 186
             I  S  + D+ G+ L   N+   +L+  +  ID+ NYPE     +I+NA   F   W  +
Sbjct:   201 IDQSTTIFDVQGVGLKNFNKSARELLQRLLKIDNDNYPETLNRMFIINAGPGFRLLWAPI 260

Query:   187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
             K  L  +T  K+ VL    + +LL+ +D + LP+F
Sbjct:   261 KKFLDPKTTSKIHVLGNKYQPKLLEAIDASELPYF 295

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

TAIR|locus:2049319 SFH3 "SEC14-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
 Identities = 48/155 (30%), Positives = 75/155 (48%)

Query:    73 GVSGYSKEGLPVIAVGVGLSTHDK----ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
             G  G  K+G PV    +G     K     +++ YV+ H++  E    + LP+ S    ++
Sbjct:   148 GYHGVDKDGRPVYIERLGQVDATKLMQVTTIDRYVKYHVREFEKTFNIKLPACSIAAKKH 207

Query:   129 IGTSLKVLDMTGLKLSALNQIK--LMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV 186
             I  S  +LD+ G+ L + ++    L+  I  ID  NYPE     +I+NA   F   W  V
Sbjct:   208 IDQSTTILDVQGVGLKSFSKAARDLLQRIQKIDSDNYPETLNRMFIINAGSGFRLLWSTV 267

Query:   187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
             K  L  +T  K+ VL    + +LL+I+D   LP F
Sbjct:   268 KSFLDPKTTAKIHVLGNKYQSKLLEIIDSNELPEF 302

GO:0005215 "transporter activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0008526 "phosphatidylinositol transporter activity" evidence=IGI;ISS

GO:0009908 "flower development" evidence=IDA

CGD|CAL0003685 SEC14 [Candida albicans (taxid:5476)]

 Score = 168 (64.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 53/171 (30%), Positives = 90/171 (52%)

Query:    52 HKMKPILPAELYRAV-RDSQLVGVSGYSKE-GLPVIAVGVGLSTHDKASVNYYVQSHIQM 109
             ++ KPI+ A++Y      +   G   Y +E G   +   + ++T ++   N  V  +  M
Sbjct:    97 YEEKPIV-AKMYPTYYHKTDKDGRPVYFEELGKVDLVKMLKITTQERMLKNL-VWEYEAM 154

Query:   110 NEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKL-SALNQIKLMTVITTIDDLNYPEKTE 168
              +YR    LP+ S+K G  + TS  VLD++G+ + SA N I  +   + I    YPE+  
Sbjct:   155 CQYR----LPACSRKAGYLVETSCTVLDLSGISVTSAYNVIGYVREASKIGQDYYPERMG 210

Query:   169 TYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLP 219
              +Y++NAP+ FS  +K+ KP L   T  K+ +L  + + ELLK +   +LP
Sbjct:   211 KFYLINAPFGFSTAFKLFKPFLDPVTVSKIHILGYSYKKELLKQIPPQNLP 261

GO:0006657 "CDP-choline pathway" evidence=IGI

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=IGI

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0008526 "phosphatidylinositol transporter activity" evidence=ISS

GO:0051286 "cell tip" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0032153 "cell division site" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005628 "prospore membrane" evidence=IEA

GO:0008525 "phosphatidylcholine transporter activity" evidence=IEA

GO:0006896 "Golgi to vacuole transport" evidence=IEA

GO:2001246 "negative regulation of phosphatidylcholine biosynthetic process" evidence=IEA

GO:0048194 "Golgi vesicle budding" evidence=IEA

GO:0046488 "phosphatidylinositol metabolic process" evidence=IEA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=IEA

GO:0031321 "ascospore-type prospore assembly" evidence=IEA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IEA

GO:0015914 "phospholipid transport" evidence=IEA

GO:0033205 "cell cycle cytokinesis" evidence=IEA

GO:0010570 "regulation of filamentous growth" evidence=IEA

UNIPROTKB|P46250 SEC14 "SEC14 cytosolic factor" [Candida albicans SC5314 (taxid:237561)]

 Score = 168 (64.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 53/171 (30%), Positives = 90/171 (52%)

Query:    52 HKMKPILPAELYRAV-RDSQLVGVSGYSKE-GLPVIAVGVGLSTHDKASVNYYVQSHIQM 109
             ++ KPI+ A++Y      +   G   Y +E G   +   + ++T ++   N  V  +  M
Sbjct:    97 YEEKPIV-AKMYPTYYHKTDKDGRPVYFEELGKVDLVKMLKITTQERMLKNL-VWEYEAM 154

Query:   110 NEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKL-SALNQIKLMTVITTIDDLNYPEKTE 168
              +YR    LP+ S+K G  + TS  VLD++G+ + SA N I  +   + I    YPE+  
Sbjct:   155 CQYR----LPACSRKAGYLVETSCTVLDLSGISVTSAYNVIGYVREASKIGQDYYPERMG 210

Query:   169 TYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLP 219
              +Y++NAP+ FS  +K+ KP L   T  K+ +L  + + ELLK +   +LP
Sbjct:   211 KFYLINAPFGFSTAFKLFKPFLDPVTVSKIHILGYSYKKELLKQIPPQNLP 261

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0006657 "CDP-choline pathway" evidence=IGI

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=IGI

GO:0008526 "phosphatidylinositol transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_I2877 hypothetical protein (337 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	316
smart00516	158	smart00516, SEC14, Domain in homologues of a S	1e-23
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	3e-22
pfam00650	152	pfam00650, CRAL_TRIO, CRAL/TRIO domain	1e-13
pfam03765	48	pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma	2e-07
smart01100	48	smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom	2e-07

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 94.3 bits (235), Expect = 1e-23
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 7/152 (4%)

Query: 71  LVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIG 130
           + G  GY K+G PV+    G       ++   ++  + + E   +       +K    I 
Sbjct: 9   IPGGRGYDKDGRPVLIERAGRFDLKSVTLEELLRYLVYVLEKILQ------EEKKTGGIE 62

Query: 131 TSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLL 190
               + D+ GL +S    + ++  I  I   +YPE+    YI+N P+ F   WK++KP L
Sbjct: 63  GFTVIFDLKGLSMSNP-DLSVLRKILKILQDHYPERLGKVYIINPPWFFRVLWKIIKPFL 121

Query: 191 QERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
            E+TR K++ +  + ++ELL+ +D   LP   
Sbjct: 122 DEKTREKIRFVGNDSKEELLEYIDKEQLPEEL 153

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score = 90.9 bits (226), Expect = 3e-22
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 12/162 (7%)

Query: 63  YRAVRDSQLVGVSGY-SKEGLPVIAVGVGLSTHDKA-SVNYYVQSHIQMNEYRDRVVLPS 120
              +++   VG  G   KEG PV+ +  G     K+      ++  +   E   +     
Sbjct: 1   LEELKELGKVGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQ 60

Query: 121 ASKKHGRYIGTSLKVLDMTGLKLS-ALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIF 179
                         ++D+ GL LS  L    L+  I  I   NYPE+ +  YI+N P+ F
Sbjct: 61  VEGFVV--------IIDLKGLSLSHLLPDPSLLKKILKILQDNYPERLKAVYIINPPWFF 112

Query: 180 SACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
              WK+VKP L E+TR+K+  L G+ ++ELLK +D   LP  
Sbjct: 113 KVLWKIVKPFLSEKTRKKIVFL-GSDKEELLKYIDKEQLPEE 153

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain

 Score = 67.3 bits (165), Expect = 1e-13
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 9/155 (5%)

Query: 69  SQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
                + G  KEG PV+ +  G     K+S+   V+  + + E        +        
Sbjct: 1   GGKGYLHGRDKEGRPVLYLRPGRHDPKKSSLEELVRFLVLVLER-------ALLLLPEGQ 53

Query: 129 IGTSLKVLDMTGLKLSALNQIKLMTVITTIDDL--NYPEKTETYYIVNAPYIFSACWKVV 186
           I     ++DM GL LS +++  +  +   +  L  NYPE+     IVNAP+IF+  WK++
Sbjct: 54  IEGITVIIDMKGLSLSNMDKWPISFLKKILKILQDNYPERLGKILIVNAPWIFNVIWKLI 113

Query: 187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
           KP L  +TR K+   + +  +ELLK +    LP  
Sbjct: 114 KPFLDPKTREKIHFHKNSNLEELLKYIPPEQLPKE 148

Length = 152

>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 9/52 (17%)

Query: 4  QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTD-TLVRFLKARDWNVSKAHKM 54
          +E++++ +  +++L D LK+           D  L+RFL+AR ++V KA KM
Sbjct: 1  EEKLEELREKLQELKDLLKD--------KLDDAFLLRFLRARKFDVEKAIKM 44

This all-alpha domain is found to the N-terminus of pfam00650. Length = 48

>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 7/51 (13%)

Query: 4  QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM 54
          +E +++ + L+E   D L               L+RFL+AR ++V KA +M
Sbjct: 1  EEALEELRELLEKHPDLLPPRL-------DDAFLLRFLRARKFDVEKAKEM 44

Length = 48

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	316
KOG1471	317	consensus Phosphatidylinositol transfer protein SE	100.0
KOG1470	324	consensus Phosphatidylinositol transfer protein PD	100.0
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	99.97
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.96
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.93
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	99.54
PF03765	55	CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr	98.89
KOG4406	467	consensus CDC42 Rho GTPase-activating protein [Sig	98.25
PF14555	43	UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A	81.15

>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=1e-37  Score=291.72  Aligned_cols=199  Identities=34%  Similarity=0.487  Sum_probs=173.1

Q ss_pred             CCCCHHHHHHHHhcCCCChHHHccC-------------CCCCCH-HHHHHHHcccceeecCCCCCCCcEEEEeecCCCCC
Q 021197           30 QGNPTDTLVRFLKARDWNVSKAHKM-------------KPILPA-ELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHD   95 (316)
Q Consensus        30 ~~~~D~~LlRFLrar~fdv~kA~~m-------------~~i~~~-~~~~~l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~   95 (316)
                      ...+|.+|+||||||+||+++|.+|             +.+... +....+.++.+.+++|.|++|+|+++.+.|..+..
T Consensus        41 ~~~~d~~LlRfLra~~f~ve~a~~~l~~~l~~r~~~~~d~i~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~g~~~~~  120 (317)
T KOG1471|consen   41 KYDDDFNLLRFLRARKFDVEKAKQMLKRYLNWRKRNKLDEIFEDFEEDDELLKYYPQGLHGVDKEGRPVYIERLGKIDPK  120 (317)
T ss_pred             CCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCCccHhhccccchhhhhhccccccccCCCCCEEEEeccCCCCcc
Confidence            3677899999999999999999999             112211 22234444678999999999999999999999765


Q ss_pred             ----CcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccCCCh--HHHHHHHHHhhhhcCcccccc
Q 021197           96 ----KASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTET  169 (316)
Q Consensus        96 ----~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~~~~--~~~~~~~~~i~q~~YPe~l~~  169 (316)
                          .....+++++++..+|+..+.+++.+....+++++|++.|+||+|+++++++.  +++++.++.++|+||||++++
T Consensus       121 ~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~~I~Dl~G~~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~  200 (317)
T KOG1471|consen  121 GLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIVTIFDLKGVSLSHLLKPAPTLLKKILKILQDNYPERLKR  200 (317)
T ss_pred             cceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEECCCCcchhHHHHHHHHHHHHHHHHHHhCHHhhce
Confidence                35678899999999999888888877777678999999999999999999853  578999999999999999999


Q ss_pred             EEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccccccCCCCcccc
Q 021197          170 YYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRH  232 (316)
Q Consensus       170 i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~yGg~~GG~~~~  232 (316)
                      +||||+|++|+++|++|||||+++|++||+++++++.++|+++|++++||.+|    ||++.+
T Consensus       201 ~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~~~~~~~L~k~i~~~~LP~~y----GG~~~~  259 (317)
T KOG1471|consen  201 IHIINAPTIFSALWKVVKPFLDEKTRKKIHVLHSKDKESLLKYIPPEVLPEEY----GGTCGD  259 (317)
T ss_pred             EEEEcCchhHHHHHHHHhccCCHHHHhhheecCCCchhhhhhhCCHhhCcccc----CCCccc
Confidence            99999999999999999999999999999977888999999999999999999    666655

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=1e-36  Score=277.78  Aligned_cols=186  Identities=27%  Similarity=0.419  Sum_probs=161.4

Q ss_pred             CCCHHHHHHHHhcCCCChHHHccC-------------CC-CCCHHHHHHHHcccceeecCCCCCCCcEEEEeecCCCCCC
Q 021197           31 GNPTDTLVRFLKARDWNVSKAHKM-------------KP-ILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDK   96 (316)
Q Consensus        31 ~~~D~~LlRFLrar~fdv~kA~~m-------------~~-i~~~~~~~~l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~   96 (316)
                      .++|++++||||||+||+++|.+|             .. +...++-.++ +.+.+++.|+|++||||+|+++.......
T Consensus        46 ~~~d~cllRfLrAr~wnv~kA~kml~~tL~WR~~~~~~~~~~~~Ev~~e~-~tGK~yi~G~D~~gRPVl~~~~~~~~qn~  124 (324)
T KOG1470|consen   46 WCSDACLLRFLRARKWNVKKASKMLSNTLKWRRSFGPEEVIEADEVAAEL-ETGKAYILGHDKDGRPVLYLRPRPHRQNT  124 (324)
T ss_pred             cCcHHHHHHHHHHcCCcHHHHHHHHHHHhHHHHhcCCccccCHHHHHHHh-hcCcEEEecccCCCCeEEEEecCCCCCCC
Confidence            568999999999999999999999             12 2223333333 56889999999999999999887766667


Q ss_pred             cCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccCCChHHHHHHHHHhhhhcCccccccEEEEcCC
Q 021197           97 ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVITTIDDLNYPEKTETYYIVNAP  176 (316)
Q Consensus        97 ~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~~~~~~~~~~~~~i~q~~YPe~l~~i~iVNaP  176 (316)
                      .+.+.+.|..++++|..+        ..++++++++++++|++|+|+++++ +++.+.+++++|+||||||+..+++|+|
T Consensus       125 ~t~~~~~r~~Vy~mE~Ai--------~~lp~~qe~~~~L~D~~~fs~sN~d-~~~~k~~~~~lq~hYPErLg~a~l~~~P  195 (324)
T KOG1470|consen  125 KTQKELERLLVYTLENAI--------LFLPPGQEQFVWLFDLTGFSMSNPD-IKFLKELLHILQDHYPERLGKALLVNAP  195 (324)
T ss_pred             CCHHHHHHHHHHHHHHHH--------HhCCCCcceEEEEEecccCcccCCC-cHHHHHHHHHHHHhChHHhhhhhhcCCh
Confidence            788999999999988753        3567888999999999999999988 8999999999999999999999999999


Q ss_pred             hhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccccccCCCCcccc
Q 021197          177 YIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRH  232 (316)
Q Consensus       177 ~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~yGg~~GG~~~~  232 (316)
                      |+|..+|++|||||++.|++||+|..+  ...|.+|||+++||..|    ||+...
T Consensus       196 ~iF~~~wkiikpflDp~t~~Kv~F~~~--~~~l~~~~d~~~l~s~~----GG~~~~  245 (324)
T KOG1470|consen  196 WIFQPFWKIIKPFLDPKTASKVKFVEP--KDDLSEYFDESQLPSLF----GGKLLF  245 (324)
T ss_pred             HHHHHHHHHhhhccChhhhceeEEecC--hhHHHhhCCccccchhh----CCCccc
Confidence            999999999999999999999999874  45699999999999999    675443

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=99.97  E-value=1.8e-31  Score=224.26  Aligned_cols=153  Identities=27%  Similarity=0.462  Sum_probs=125.3

Q ss_pred             HHHcccceeecCCCCCCCcEEEEeecCCCCCCcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCccc
Q 021197           65 AVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLS  144 (316)
Q Consensus        65 ~l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~  144 (316)
                      ++.+.++++++|+|++||||+|+++|++++.+.+.++++++.++++|...+.. +     .+.+++++++|+|++|++++
T Consensus         2 ~~~~~~~~~~~g~D~~gr~v~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~~-~-----~~~~~~~~~~iiD~~g~~~~   75 (159)
T PF00650_consen    2 EILKSGPFYLHGRDKDGRPVIYIRLGRFDPKKFSPEDVIRFFVYLLERMLKRM-P-----EGGQVEGIVVIIDLSGFSLS   75 (159)
T ss_dssp             HHHTTSCEEEEEE-TTS-EEEEEEGTT--HHTS-HHHHHHHHHHHHHHHHHTH-H-----HTSHHH-EEEEEE-TT--HH
T ss_pred             HHHCCeeEEECCCCCCcCEEEEEEcccCCCCcCCHHHHHHHHHHHHHHHHhhh-c-----ccccceeEEEEEeCCCceEe
Confidence            35678899999999999999999999999888888999999999999876421 1     14678999999999999998


Q ss_pred             CCCh--HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCC-CChhHHHhhCCCCCcccc
Q 021197          145 ALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQG-NGRDELLKIMDYASLPHF  221 (316)
Q Consensus       145 ~~~~--~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~-~~~~~L~k~i~~~~LP~~  221 (316)
                      +++.  +++++.+++++|++|||+++++||||+|++|+++|++++|||+++|++||+++++ ++.++|.++|++++||.+
T Consensus        76 ~~~~~~~~~~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~~~l~~~i~~~~lP~~  155 (159)
T PF00650_consen   76 NFDWWPISFLKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVKPFLSPKTREKIVFHSGSDWKAKLKEYIDPEQLPVE  155 (159)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHGGGS-HHHHCTEEEECTTCHCHHHCCCSTGGGSBGG
T ss_pred             ccccchhhhhhhhhhhhcccCCccceeEEEEecChhhhhhHhHHHhhcCHhhheeEEEECCcccHHHHHhhCCHhHCchh
Confidence            8753  6789999999999999999999999999999999999999999999999999965 455799999999999999


Q ss_pred             cc
Q 021197          222 CR  223 (316)
Q Consensus       222 yG  223 (316)
                      ||
T Consensus       156 ~G  157 (159)
T PF00650_consen  156 YG  157 (159)
T ss_dssp             GT
T ss_pred             cC
Confidence            93

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>smart00516 SEC14 Domain in homologues of a S

Probab=99.96  E-value=2.3e-29  Score=211.22  Aligned_cols=152  Identities=26%  Similarity=0.461  Sum_probs=137.1

Q ss_pred             HcccceeecCCCCCCCcEEEEeecCCCCCCcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccCC
Q 021197           67 RDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSAL  146 (316)
Q Consensus        67 ~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~~  146 (316)
                      +.+.+.++ |+|++||||++++++.++.+..+.+++++++++.+|...+.      ...+.+++++++|+|++|++++++
T Consensus         6 ~~~~~~~~-g~D~~GrpV~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~~~i~D~~~~~~~~~   78 (158)
T smart00516        6 KAYIPGGR-GYDKDGRPVLIFRAGRFDLKSVTLEELLRYLVYVLEKILQR------EKKTGGIEGFTVIFDLKGLSMSNP   78 (158)
T ss_pred             HHhcCCCC-CCCCCcCEEEEEeccccccCcCCHHHHHHHHHHHHHHHHHH------HhcCCCeeeEEEEEECCCCCcccc
Confidence            34556666 99999999999999999988899999999999999986432      234678899999999999999996


Q ss_pred             ChHHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccccccCC
Q 021197          147 NQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEG  226 (316)
Q Consensus       147 ~~~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~yGg~~  226 (316)
                      + +++++.++++++++||++++++||||+|++++++|+++++||+++|++||+++++++.+.|.++|++++||.+|    
T Consensus        79 ~-~~~lk~~~~~~~~~yp~~l~~i~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~~~~L~~~i~~~~lP~~~----  153 (158)
T smart00516       79 D-LSVLRKILKILQDHYPERLGKVLIINPPWFFRVLWKIIKPFLDEKTREKIRFVGNDSKEELLEYIDPEQLPEEL----  153 (158)
T ss_pred             c-HHHHHHHHHHHHHHhHHHhCeEEEECCCHHHHHHHHHHHhhcChhhhccEEEeCCCCHHHHHhhCCHhhCcHhh----
Confidence            5 78999999999999999999999999999999999999999999999999999877789999999999999999    


Q ss_pred             CCcc
Q 021197          227 SGSS  230 (316)
Q Consensus       227 GG~~  230 (316)
                      ||++
T Consensus       154 GG~~  157 (158)
T smart00516      154 GGTL  157 (158)
T ss_pred             CCCC
Confidence            6664

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.93  E-value=3.2e-25  Score=184.28  Aligned_cols=143  Identities=33%  Similarity=0.525  Sum_probs=122.6

Q ss_pred             eeecC-CCCCCCcEEEEeecCCCCCC-cCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccCCC-h
Q 021197           72 VGVSG-YSKEGLPVIAVGVGLSTHDK-ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALN-Q  148 (316)
Q Consensus        72 ~~~~G-~Dk~GrPV~~~~~g~~~~~~-~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~~~-~  148 (316)
                      +++.| .|++||||++.+++..++.. ...++++++.++.+|...+.        .....+++++|+|++|++++++. .
T Consensus        10 ~~~~~~~D~~gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--------~~~~~~~~~~i~D~~~~~~~~~~~~   81 (157)
T cd00170          10 VGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQE--------DDEQVEGFVVIIDLKGLSLSHLLPD   81 (157)
T ss_pred             ccccCCCCCCcCEEEEEecCCcchhhcCCHHHHHHHHHHHHHHHHhh--------hhhcccceEEEEECCCCChhccchh
Confidence            34444 59999999999999765543 33488999999988876442        12233799999999999999884 4


Q ss_pred             HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccccc
Q 021197          149 IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCR  223 (316)
Q Consensus       149 ~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~yG  223 (316)
                      ++.++.++.+++++||++++++||||+|++++++|+++++|+++++++||++++++ .++|.++|++++||.+||
T Consensus        82 ~~~~k~~~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~-~~~L~~~i~~~~Lp~~~G  155 (157)
T cd00170          82 PSLLKKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSD-KEELLKYIDKEQLPEEYG  155 (157)
T ss_pred             HHHHHHHHHHHHHhChHhhCeEEEECCCHhHHHHHHHHHHhcCHhhhhhEEEecCC-HHHHHhhCChhhCcHhhC
Confidence            68899999999999999999999999999999999999999999999999998754 799999999999999994

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=99.54  E-value=4.2e-15  Score=123.98  Aligned_cols=141  Identities=16%  Similarity=0.228  Sum_probs=95.3

Q ss_pred             eeecCCCCCCCcEEEEeecCCCCCCcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccCCChHHH
Q 021197           72 VGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKL  151 (316)
Q Consensus        72 ~~~~G~Dk~GrPV~~~~~g~~~~~~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~~~~~~~  151 (316)
                      ++..|+|++||||+++....+ ++....+.++.+.+..++       +      .-...++++|+|+++++..+......
T Consensus         4 ~~~gG~d~~g~pV~~~~~~~~-~~~~~~~~ll~yl~~~l~-------~------~~~~~~f~vVid~~~~~~~~~~~~~~   69 (149)
T PF13716_consen    4 FYPGGRDREGRPVVVFIASRL-PSSDDLERLLLYLLSTLS-------E------EVVDKPFSVVIDHTGFSRSSEPSLSW   69 (149)
T ss_dssp             -EEEEEBTTS-EEEEEEGGG--C-TTHHHHHHHHHHHHH--------T------TTTTS-EEEEEE-TT--GGG---HHH
T ss_pred             EEecccCCCcCEEEEEECCcC-cchhhHHHHHHHHHHhhh-------H------HhcCCCEEEEEEcCCCccccCCchHH
Confidence            456789999999999998887 544555666655443321       1      11224699999999998876655788


Q ss_pred             HHHHHHhhhhcCccccccEEEEcCChhHHHHH-HHhcccCCHhh-hcceEEeCCCChhHHHhhCCCCCcccccccCCCCc
Q 021197          152 MTVITTIDDLNYPEKTETYYIVNAPYIFSACW-KVVKPLLQERT-RRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGS  229 (316)
Q Consensus       152 ~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~-~lvkpfL~~~t-~~Ki~~~~~~~~~~L~k~i~~~~LP~~yGg~~GG~  229 (316)
                      ++++..++...|+..++++||||++++++.+. .+.+++.+.+. ..|++++.  ..++|.++||+++||...    ||+
T Consensus        70 l~~~~~~l~~~~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~~~~~~~kv~~~~--sl~~L~~~i~~~qL~~~l----p~~  143 (149)
T PF13716_consen   70 LKQLYKLLPRKYKKNLKKVYIVHPNWFLKKILATLLRPFVSSKFWKKKVVYVS--SLSELSKHIDPSQLPESL----PGV  143 (149)
T ss_dssp             HHHTTTSS-HHHHHTEEEEEEES--HHHHHHHHHTTTTGGGGTT--TTEEEES--STCGGGGTSGGGG----------HH
T ss_pred             HHHHHHHHHHHHhhceEEEEEECCCHHHHHHHHHHhcccccccccceEEEEEC--CHHHHHhhCCHHHhcccC----CCE
Confidence            99999999999999999999999999999999 56677788888 89999887  489999999999999999    777


Q ss_pred             ccc
Q 021197          230 SRH  232 (316)
Q Consensus       230 ~~~  232 (316)
                      ..+
T Consensus       144 ~~~  146 (149)
T PF13716_consen  144 LQY  146 (149)
T ss_dssp             H--
T ss_pred             Eec
Confidence            765

>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=98.89  E-value=1.7e-09  Score=74.74  Aligned_cols=51  Identities=29%  Similarity=0.585  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHhhCchHHHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC
Q 021197            4 QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM   54 (316)
Q Consensus         4 ~~~i~elr~~l~~~~~~l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m   54 (316)
                      ++++++|++.+..............+...+|.+|+||||||+||+++|.+|
T Consensus         1 k~~l~~l~~~l~~~~~~~~~~~~~~~~~~~d~~llRFLRARkf~v~~A~~m   51 (55)
T PF03765_consen    1 KQKLKQLREHLSELDEKAPGLWDDEKEDHDDNFLLRFLRARKFDVEKAFKM   51 (55)
T ss_dssp             HHHHHHHHHHHHH--GGGTHHHTTHTSS-SHHHHHHHHHHTTT-HHHHHHH
T ss_pred             CHHHHHHHHHHHHhccchhcccccccCCCCHHHHHHHHHHccCCHHHHHHH
Confidence            589999999998864322111123456789999999999999999999987

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1AUA_A 3Q8G_A 3B7Q_B 3B7Z_A 3B7N_A ....

>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton]

Probab=98.25  E-value=6.2e-06  Score=77.74  Aligned_cols=126  Identities=17%  Similarity=0.209  Sum_probs=98.2

Q ss_pred             CCCCCCcEEEEeecCCCCCC-cCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccCCChHHHHHHH
Q 021197           77 YSKEGLPVIAVGVGLSTHDK-ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVI  155 (316)
Q Consensus        77 ~Dk~GrPV~~~~~g~~~~~~-~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~~~~~~~~~~~  155 (316)
                      +|++||+|+++.+.++...+ ..--.++++.++..++.++              +..+.++=-.|+...+...++++.+.
T Consensus        89 ~D~~gr~iivv~a~rlp~~~eld~~~li~~~v~~id~~Ve--------------~DYt~vYfh~gl~s~nkp~l~~l~~a  154 (467)
T KOG4406|consen   89 KDKQGRKIIVVYACRLPSSSELDDIRLISYLVYTIDKYVE--------------NDYTLVYFHHGLPSDNKPYLQLLFDA  154 (467)
T ss_pred             ccccCCeeEEEEEecCCchhhhhhHHHHHHHHHHHHHHHh--------------ccceeeehhcCCcccccchHHHHHHH
Confidence            69999999999999986532 2222377777776665422              11444554567777777667777777


Q ss_pred             HHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCc
Q 021197          156 TTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASL  218 (316)
Q Consensus       156 ~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~L  218 (316)
                      ..-+..+|--.++.+|+|.+-|+..++|+++|||++.+..+||.-+.  ..++|.+++.-++|
T Consensus       155 Yke~Dr~~~KNlKalYvvHptwfikvi~n~~kplIS~KF~rKi~Y~n--~lseL~~~l~l~rL  215 (467)
T KOG4406|consen  155 YKELDRNFKKNLKALYVVHPTWFIKVIWNLFKPLISLKFTRKIIYFN--SLSELFEALKLNRL  215 (467)
T ss_pred             HHHHHHHHhhhhhheEEecHHHHHHHHHHHHhhhcchhhhceeEEee--hHHHHHHhhhhhhh
Confidence            77777899999999999999999999999999999999999999876  58999998875544

>PF14555 UBA_4: UBA-like domain; PDB: 2DAL_A 3BQ3_A 2L4E_A 2L4F_A 2DZL_A 2L2D_A 2DAM_A 1V92_A 3E21_A

Probab=81.15  E-value=2.9  Score=26.87  Aligned_cols=22  Identities=23%  Similarity=0.622  Sum_probs=17.7

Q ss_pred             CHHHHHHHHhcCCCChHHHccC
Q 021197           33 PTDTLVRFLKARDWNVSKAHKM   54 (316)
Q Consensus        33 ~D~~LlRFLrar~fdv~kA~~m   54 (316)
                      ++..-..||.+++||++.|...
T Consensus        14 ~~~~A~~~L~~~~wdle~Av~~   35 (43)
T PF14555_consen   14 DEDVAIQYLEANNWDLEAAVNA   35 (43)
T ss_dssp             SHHHHHHHHHHTTT-HHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHHHHHHH
Confidence            4558899999999999999764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	316
3q8g_A	320	Resurrection Of A Functional Phosphatidylinositol T		2e-12
3b74_A	320	Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co		5e-12
1aua_A	296	Phosphatidylinositol Transfer Protein Sec14p From S		4e-11
1olm_E	403	Supernatant Protein Factor In Complex With Rrr-Alph		3e-09
1olm_A	403	Supernatant Protein Factor In Complex With Rrr-Alph		3e-09
1o6u_A	403	The Crystal Structure Of Human Supernatant Protein		1e-08

>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 52/252 (20%)
Query: 3   HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAEL 62
            +E + QF++++  L+ + KE   +        TL+RFL+AR ++++ + +M   +  E 
Sbjct: 39  QEEALLQFRSIL--LEKNYKERLDD-------STLLRFLRARKFDINASVEM--FVETER 87
Query: 63  YRA----------------VRDSQLVGVSGY--------SKEGLPVIAV---GVGLS--- 92
           +R                   D + + ++           K+G P+      G+ L    
Sbjct: 88  WREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMY 147
Query: 93  --THDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIK 150
             T +K  +   V+ +     YR    +P+ S++ G  I TS  VLD+ G+ LS  N   
Sbjct: 148 KITTEKQMLRNLVKEYELFATYR----VPACSRRAGYLIETSCTVLDLKGISLS--NAYH 201
Query: 151 LMTVITTIDDLN---YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRD 207
           +++ I  + D++   YPE+   +YI+++P+ FS  +K+VKP L   T  K+ +L  + + 
Sbjct: 202 VLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKK 261
Query: 208 ELLKIMDYASLP 219
           ELLK +   +LP
Sbjct: 262 ELLKQIPIENLP 273

>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 52/252 (20%)
Query: 3   HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKPILPAEL 62
            +E + QF++++  L+ + KE   +        TL+RFL+AR ++++ + +M   +  E 
Sbjct: 39  QEEALLQFRSIL--LEKNYKERLDD-------STLLRFLRARKFDINASVEM--FVETER 87
Query: 63  YRA----------------VRDSQLVGVSGY--------SKEGLPVIAV---GVGLS--- 92
           +R                   D + + ++           K+G P+      G+ L    
Sbjct: 88  WREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFEELGGINLKKMY 147
Query: 93  --THDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIK 150
             T +K  +   V+ +     YR    +P+ S++ G  I TS  VLD+ G+ LS  N   
Sbjct: 148 KITTEKQMLRNLVKEYELFATYR----VPACSRRAGYLIETSCTVLDLKGISLS--NAYH 201
Query: 151 LMTVITTIDDLN---YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRD 207
           +++ I  + D++   YPE+   +YI+++P+ FS  +K+VKP L   T  K+ +L  + + 
Sbjct: 202 VLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKK 261
Query: 208 ELLKIMDYASLP 219
           ELLK +   +LP
Sbjct: 262 ELLKQIPIENLP 273

>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 58/253 (22%)
Query: 2   AHQEEIKQFQTLMED------LDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM- 54
           A ++ + + + L+ED      LDDS               TL+RFL+AR ++V  A +M 
Sbjct: 29  AQEKALAELRKLLEDAGFIERLDDS---------------TLLRFLRARKFDVQLAKEMF 73
Query: 55  -----------------------KPIL----PAELYRAVRDSQLVGVSGYSKEGLPVIAV 87
                                  KP++    P   ++  +D + V    Y +E   V   
Sbjct: 74  ENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPV----YFEELGAVNLH 129
Query: 88  GVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLS-AL 146
            +   T ++  +   V  +  + +YR    LP+ S+  G  + TS  ++D+ G+ +S A 
Sbjct: 130 EMNKVTSEERMLKNLVWEYESVVQYR----LPACSRAAGHLVETSCTIMDLKGISISSAY 185
Query: 147 NQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGR 206
           + +  +   + I    YPE+   +YI+NAP+ FS  +++ KP L   T  K+ +L  + +
Sbjct: 186 SVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQ 245
Query: 207 DELLKIMDYASLP 219
            ELLK +   +LP
Sbjct: 246 KELLKQIPAENLP 258

>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 32  NPTDT-LVRFLKARDWNVSKAHKM-------------KPILPAELYRAVRDSQLVGVSGY 77
           NP D  L+R+L+AR +++ K+  M               I+  +    ++     G+ GY
Sbjct: 32  NPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGY 91
Query: 78  SKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSAS---KKHGRYIGTSLK 134
             +G PV    +G         +   Q  ++       ++L   +    K GR + T   
Sbjct: 92  DLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITI 151
Query: 135 VLDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQE 192
           + D  GL L  L +  ++       + + NYPE  +  ++V AP +F   + ++KP L E
Sbjct: 152 IYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSE 211
Query: 193 RTRRKMQVLQGNGRDELLKIMDYASLP 219
            TR+K+ VL  N ++ LLK +    +P
Sbjct: 212 DTRKKIMVLGANWKEVLLKHISPDQVP 238

>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 32  NPTDT-LVRFLKARDWNVSKAHKM-------------KPILPAELYRAVRDSQLVGVSGY 77
           NP D  L+R+L+AR +++ K+  M               I+  +    ++     G+ GY
Sbjct: 32  NPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGY 91
Query: 78  SKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSAS---KKHGRYIGTSLK 134
             +G PV    +G         +   Q  ++       ++L   +    K GR + T   
Sbjct: 92  DLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITI 151
Query: 135 VLDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQE 192
           + D  GL L  L +  ++       + + NYPE  +  ++V AP +F   + ++KP L E
Sbjct: 152 IYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSE 211
Query: 193 RTRRKMQVLQGNGRDELLKIMDYASLP 219
            TR+K+ VL  N ++ LLK +    +P
Sbjct: 212 DTRKKIMVLGANWKEVLLKHISPDQVP 238

>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 32  NPTDT-LVRFLKARDWNVSKAHK-------------MKPILPAELYRAVRDSQLVGVSGY 77
           NP D  L+R+L+AR +++ K+               +  I+  +    ++     G  GY
Sbjct: 32  NPDDYFLLRWLRARSFDLQKSEAXLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGXCGY 91
Query: 78  SKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSAS---KKHGRYIGTSLK 134
             +G PV    +G         +   Q  ++       ++L   +    K GR + T   
Sbjct: 92  DLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKXRECELLLQECAHQTTKLGRKVETITI 151
Query: 135 VLDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQE 192
           + D  GL L  L +  ++         + NYPE  +  ++V AP +F   + ++KP L E
Sbjct: 152 IYDCEGLGLKHLWKPAVEAYGEFLCXFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSE 211
Query: 193 RTRRKMQVLQGNGRDELLKIMDYASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRL 252
            TR+K+ VL  N ++ LLK +    +P    + G   +   GN   ++  +      ++ 
Sbjct: 212 DTRKKIXVLGANWKEVLLKHISPDQVP---VEYGGTXTDPDGNPKCKSKINYGGDIPRKY 268
Query: 253 Y--NYIKQQAVLTESVVPIRQGSFH 275
           Y  + +KQQ    E  V I +GS H
Sbjct: 269 YVRDQVKQQ---YEHSVQISRGSSH 290

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	316
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	1e-53
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	2e-52
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	2e-51
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	5e-28
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	2e-23
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296

 Score =  176 bits (448), Expect = 1e-53
 Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 32/242 (13%)

Query: 2   AHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTD-TLVRFLKARDWNVSKAHKM------ 54
           A ++ + + + L+ED                  D TL+RFL+AR ++V  A +M      
Sbjct: 29  AQEKALAELRKLLEDAG----------FIERLDDSTLLRFLRARKFDVQLAKEMFENCEK 78

Query: 55  -----KP--ILP---AELYRAVRDSQLVGVSGYSKEGLPVIAVGVGL----STHDKASVN 100
                    IL     +    +            K+G PV    +G       +   S  
Sbjct: 79  WRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEE 138

Query: 101 YYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQ-IKLMTVITTID 159
             +++ +   E   +  LP+ S+  G  + TS  ++D+ G+ +S+    +  +   + I 
Sbjct: 139 RMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYIS 198

Query: 160 DLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLP 219
              YPE+   +YI+NAP+ FS  +++ KP L   T  K+ +L  + + ELLK +   +LP
Sbjct: 199 QNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP 258

Query: 220 HF 221
             
Sbjct: 259 VK 260

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403

 Score =  176 bits (447), Expect = 2e-52
 Identities = 65/316 (20%), Positives = 128/316 (40%), Gaps = 32/316 (10%)

Query: 4   QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMKP------- 56
           +E + +F+  ++D+  +L               L+R+L+AR +++ K+  M         
Sbjct: 13  KEALAKFRENVQDVLPALPNP--------DDYFLLRWLRARSFDLQKSEAMLRKHVEFRK 64

Query: 57  ------ILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLST----HDKASVNYYVQSH 106
                 I+  +    ++     G+ GY  +G PV    +G          AS    +++ 
Sbjct: 65  QKDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTK 124

Query: 107 IQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQ--IKLMTVITTIDDLNYP 164
           ++  E   +      + K GR + T   + D  GL L  L +  ++       + + NYP
Sbjct: 125 MRECELLLQECAH-QTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYP 183

Query: 165 EKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRK 224
           E  +  ++V AP +F   + ++KP L E TR+K+ VL  N ++ LLK +    +P     
Sbjct: 184 ETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGG 243

Query: 225 EGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQQAVLTESVVPIRQGSFHVDFPEPDPE 284
             +      GN   ++  +      ++ Y   + +     SV   R  S  V++    P 
Sbjct: 244 TMTDPD---GNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFP- 299

Query: 285 GAKITKKIESEFHRIG 300
           G  +  +  S+   +G
Sbjct: 300 GCVLRWQFMSDGADVG 315

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320

 Score =  171 bits (434), Expect = 2e-51
 Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 36/245 (14%)

Query: 4   QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM--------- 54
           +E + QF++++ +         KN  +     TL+RFL+AR ++++ + +M         
Sbjct: 40  EEALLQFRSILLE---------KNYKERLDDSTLLRFLRARKFDINASVEMFVETERWRE 90

Query: 55  ---------KPILPAELYRAVRDSQL----VGVSGYSKEGLPVIAVGVGLST----HDKA 97
                          E     R               K+G P+    +G       +   
Sbjct: 91  EYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKIT 150

Query: 98  SVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIK-LMTVIT 156
           +    +++ ++  E      +P+ S++ G  I TS  VLD+ G+ LS    +   +  + 
Sbjct: 151 TEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLSYIKDVA 210

Query: 157 TIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYA 216
            I    YPE+   +YI+++P+ FS  +K+VKP L   T  K+ +L  + + ELLK +   
Sbjct: 211 DISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPIE 270

Query: 217 SLPHF 221
           +LP  
Sbjct: 271 NLPVK 275

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316

 Score =  109 bits (274), Expect = 5e-28
 Identities = 35/239 (14%), Positives = 90/239 (37%), Gaps = 29/239 (12%)

Query: 3   HQEEIKQFQTLMEDLDDSLKETFKNVHQGNP-TD--TLVRFLKARDWNVSKAHKM----- 54
            +E +++ Q +++    S +E    V +     D    +RF++AR +NV +A+++     
Sbjct: 58  REEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYV 117

Query: 55  ----------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQ 104
                       + P  +   +       +S   K G  V+   +      + + +  +Q
Sbjct: 118 NFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQ 177

Query: 105 SHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTV--ITTIDDLN 162
           ++  + E           +     I     + +  G  +     ++   +  +  +   +
Sbjct: 178 AYCFILEK--------LLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDS 229

Query: 163 YPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
           +P   +  + ++ P+ F+  + VVKP L+ +   ++ V  G+      + +D   LP  
Sbjct: 230 FPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVH-GDDLSGFYQEIDENILPSD 287

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262

 Score = 96.2 bits (240), Expect = 2e-23
 Identities = 36/238 (15%), Positives = 78/238 (32%), Gaps = 36/238 (15%)

Query: 4   QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTD--TLVRFLKARDWNVSKAHKM------- 54
           Q  +   +    +                P     L+RFL+ARD+++  A ++       
Sbjct: 9   QPGLAALRRRAREA--------GVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKW 60

Query: 55  --------KPILPAELYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSH 106
                     + P  +   ++      +      G  V+   +        +     +  
Sbjct: 61  RAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVS 120

Query: 107 IQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTV--ITTIDDLNYP 164
           +  +E           ++          + D+ G + S   QI       I  +   ++P
Sbjct: 121 LITSEL--------IVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFP 172

Query: 165 EKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFC 222
            K    +++N P IF A + ++KP L E+ + ++ +   N +  LL+      LP   
Sbjct: 173 LKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLEY 229

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 45/351 (12%), Positives = 86/351 (24%), Gaps = 102/351 (29%)

Query: 15  EDLDDSLKETFKNVHQGNPTDTLV-------RFLKA-----------RDWNVSKA----- 51
             +   L+   K   +      LV       +   A           R   V+       
Sbjct: 228 HSIQAELRRLLK--SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAAT 285

Query: 52  -------HKMKPILPAELYRAVRDSQLVGVSGYSKEGLP---------VIAVGVGLSTHD 95
                  H    + P E+      S L+       + LP          +++ +  S  D
Sbjct: 286 TTHISLDHHSMTLTPDEV-----KSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRD 339

Query: 96  KASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALNQIKLMTVI 155
                      +   +    V       K    I +SL VL+    +         ++V 
Sbjct: 340 ----------GLATWDNWKHV----NCDKLTTIIESSLNVLEPAEYR----KMFDRLSVF 381

Query: 156 TTIDDLNYPEKTETYYIVNAPYIFSACWK-----VVKPLLQERTRRKMQVLQGNGRDELL 210
                 + P               S  W       V  ++ +  +  +  ++   ++  +
Sbjct: 382 P--PSAHIPTIL-----------LSLIWFDVIKSDVMVVVNKLHKYSL--VEKQPKESTI 426

Query: 211 KIMD-YASLPHFCRKEGSGSSRHIGNGTTENCFSLDHAFHQRLYNYIKQ-------QAVL 262
            I   Y  L      E +     + +      F  D      L  Y              
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486

Query: 263 TESVVPIRQGSFHVDFPEPDPEGAKITKKIESEFHRIGDKNGLINSLNGLK 313
            E +   R       F         + +KI  +         ++N+L  LK
Sbjct: 487 PERMTLFRMVFLDFRF---------LEQKIRHDSTAWNASGSILNTLQQLK 528

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	316
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	100.0
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	100.0
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	100.0
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	100.0
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	100.0
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	99.34
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	99.17

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=100.00  E-value=7.6e-48  Score=370.00  Aligned_cols=262  Identities=24%  Similarity=0.375  Sum_probs=220.5

Q ss_pred             hHHHHHHHHHHHhhCchHHHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC--------C-----CCCCHHHHHHHHcc
Q 021197            3 HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM--------K-----PILPAELYRAVRDS   69 (316)
Q Consensus         3 ~~~~i~elr~~l~~~~~~l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m--------~-----~i~~~~~~~~l~~~   69 (316)
                      .+++|+|||+++++....+        ...+|.+|+||||||+||+++|.+|        +     .+..+.....+++.
T Consensus        12 q~~~l~~lr~~l~~~~~~l--------~~~dD~~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~~~~   83 (403)
T 1olm_A           12 QKEALAKFRENVQDVLPAL--------PNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQY   83 (403)
T ss_dssp             HHHHHHHHHHHHGGGGGGS--------SCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTGGGGGGSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCC--------CCCChhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCcccccCCHHHHHHh
Confidence            4688999999998874322        3688999999999999999999999        1     12111111235556


Q ss_pred             cceeecCCCCCCCcEEEEeecCCCCC----CcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccC
Q 021197           70 QLVGVSGYSKEGLPVIAVGVGLSTHD----KASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSA  145 (316)
Q Consensus        70 ~~~~~~G~Dk~GrPV~~~~~g~~~~~----~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~  145 (316)
                      .+.+++|+|++||||+++++|.+|++    ..+.+++++++++++|...+. ++.++...|.+++++++|+||+|+++++
T Consensus        84 ~~~~~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~r~~~~~~E~~~~~-~~~~s~~~g~~v~~~~~I~D~~g~sl~~  162 (403)
T 1olm_A           84 LSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQE-CAHQTTKLGRKVETITIIYDCEGLGLKH  162 (403)
T ss_dssp             CCBEEEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHH-HHHHHHHHTSCCCCEEEEEECTTCCGGG
T ss_pred             CCceeeccCCCcCEEEEEecCCCChHHhhccCCHHHHHHHHHHHHHHHHHH-HHhhHHhhCCcccceEEEEECCCCCHHH
Confidence            67889999999999999999999875    468899999999999998764 3445556678899999999999999999


Q ss_pred             CCh--HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccccc
Q 021197          146 LNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCR  223 (316)
Q Consensus       146 ~~~--~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~yG  223 (316)
                      ++.  +++++.++.++|+||||+++++||||+|++|.++|+++||||+++|++||+|+++++.++|.++||+++||++| 
T Consensus       163 ~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~I~~~~LP~~y-  241 (403)
T 1olm_A          163 LWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEY-  241 (403)
T ss_dssp             GCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCGGGSBGGG-
T ss_pred             HhhHHHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEEChhHHHHHHhhcChhhCchhh-
Confidence            864  57889999999999999999999999999999999999999999999999999876788999999999999999 


Q ss_pred             cCCCCcccccCCCCCCCCCC---CCchhhhHHHHHHHHhhhh-c-cccccccCCceEEeccCC
Q 021197          224 KEGSGSSRHIGNGTTENCFS---LDHAFHQRLYNYIKQQAVL-T-ESVVPIRQGSFHVDFPEP  281 (316)
Q Consensus       224 g~~GG~~~~~~~~~~~~c~~---~~~~~~~~~y~~i~~~~~~-~-~~~~~~~~~s~~~~~~~~  281 (316)
                         ||++.+  +++++.|.+   +|+++|+++|  ..++... . ++..+.++++++|.+++.
T Consensus       242 ---GG~~~~--~~~~~~c~~~i~~gg~vp~~~~--~~~~~~~~~~~~~~V~~g~~~~v~~~v~  297 (403)
T 1olm_A          242 ---GGTMTD--PDGNPKCKSKINYGGDIPRKYY--VRDQVKQQYEHSVQISRGSSHQVEYEIL  297 (403)
T ss_dssp             ---TSSBCC--TTCCTTCTTTCBCCCCCCGGGC--SCSSCCCCCSEEEEECTTCEEEEEEEEC
T ss_pred             ---CCCcCC--CCCCcccccccccCCCCCcccc--cCCCcccccceEEEEcCCCEEEEEEEEc
Confidence               899887  899999986   4889999999  5544221 1 247888999999998886

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=100.00  E-value=1.5e-44  Score=336.79  Aligned_cols=225  Identities=25%  Similarity=0.415  Sum_probs=192.2

Q ss_pred             hHHHHHHHHHHHhhCchHHHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC-------------CCCCCH-H-------
Q 021197            3 HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM-------------KPILPA-E-------   61 (316)
Q Consensus         3 ~~~~i~elr~~l~~~~~~l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m-------------~~i~~~-~-------   61 (316)
                      .+++|+|||+++++.+.         ....||.+|+||||||+||+++|.+|             +.+.+. +       
T Consensus        39 q~~~l~~lR~~l~~~~~---------~~~~dD~~LLRFLRArkfdv~kA~~mL~~~l~WRk~~~vd~i~~~~~~~~~~~~  109 (320)
T 3q8g_A           39 QEEALLQFRSILLEKNY---------KERLDDSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAED  109 (320)
T ss_dssp             HHHHHHHHHHHHHHTTC---------CSSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHHhcCC---------CCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCccccccccccccccch
Confidence            46899999999998752         24788999999999999999999999             122211 1       


Q ss_pred             -HHHHHHcccceeecCCCCCCCcEEEEeecCCCCCC----cCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEE
Q 021197           62 -LYRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDK----ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVL  136 (316)
Q Consensus        62 -~~~~l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~----~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~  136 (316)
                       ....+.++++.+++|+|++||||+|+++|.+|+++    .+.++++++.++.+|...+..++.+++..|..++++++|+
T Consensus       110 ~e~~~~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~Ii  189 (320)
T 3q8g_A          110 KERIKLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVL  189 (320)
T ss_dssp             HHHHHHHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEE
T ss_pred             hHHHHHHHhCCceecCCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEE
Confidence             11245677889999999999999999999998754    3678899999999998776556666777788899999999


Q ss_pred             eCCCCcccCCCh-HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCC
Q 021197          137 DMTGLKLSALNQ-IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDY  215 (316)
Q Consensus       137 Dl~g~s~~~~~~-~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~  215 (316)
                      ||+|+++++++. +++++.++.++|++||||++++||||+|++|.++|+++||||+++|++||+|+++++.++|.++||+
T Consensus       190 D~~g~sl~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~i~~  269 (320)
T 3q8g_A          190 DLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPI  269 (320)
T ss_dssp             ECTTCCHHHHHHTHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTTHHHHHHHHSCG
T ss_pred             ECCCCCHHHHHHHHHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCCcHHHHHhhCCh
Confidence            999999999865 5788999999999999999999999999999999999999999999999999987778999999999


Q ss_pred             CCcccccccCCCCcccccCCCCCCCCC
Q 021197          216 ASLPHFCRKEGSGSSRHIGNGTTENCF  242 (316)
Q Consensus       216 ~~LP~~yGg~~GG~~~~~~~~~~~~c~  242 (316)
                      ++||++|    ||++.+  ++.+..|.
T Consensus       270 ~~LP~~y----GG~~~~--~~~~ggc~  290 (320)
T 3q8g_A          270 ENLPVKY----GGTSVL--HNPNDKFY  290 (320)
T ss_dssp             GGSBGGG----TSCBCC--SSTTSCGG
T ss_pred             hhCChhh----CCCCCC--CCCCCCee
Confidence            9999999    888877  34445675

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=100.00  E-value=5.3e-44  Score=329.75  Aligned_cols=225  Identities=24%  Similarity=0.375  Sum_probs=190.1

Q ss_pred             hHHHHHHHHHHHhhCchHHHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC-C-------CCCCHHH--------HHHH
Q 021197            3 HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM-K-------PILPAEL--------YRAV   66 (316)
Q Consensus         3 ~~~~i~elr~~l~~~~~~l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m-~-------~i~~~~~--------~~~l   66 (316)
                      .+++|+|||+++++.+.         +...||.+|+||||||+||+++|.+| +       ..-..++        ...+
T Consensus        30 q~~~l~~lr~~l~~~~~---------~~~~dd~~LlRFLrarkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~~~~  100 (296)
T 1aua_A           30 QEKALAELRKLLEDAGF---------IERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLI  100 (296)
T ss_dssp             HHHHHHHHHHHHHHTTC---------CSSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHCCCTTHHHH
T ss_pred             HHHHHHHHHHHHHhcCC---------CCCCchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCcchhhhccccCcHHHH
Confidence            47899999999987641         35788999999999999999999999 1       1101111        1345


Q ss_pred             HcccceeecCCCCCCCcEEEEeecCCCCCC----cCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCc
Q 021197           67 RDSQLVGVSGYSKEGLPVIAVGVGLSTHDK----ASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLK  142 (316)
Q Consensus        67 ~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~----~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s  142 (316)
                      .+.++.+++|+|++||||+|+++|.+|++.    .+.+++++++++.+|...+..++.++...|.+++++++|+||+|++
T Consensus       101 ~~~~~~~~~g~Dk~GrpV~i~~~g~~d~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g~s  180 (296)
T 1aua_A          101 AKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGIS  180 (296)
T ss_dssp             GGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCC
T ss_pred             HHhCCceecccCCCCCEEEEEeeccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCCCC
Confidence            566778899999999999999999988643    5788999999999998776656666667788899999999999999


Q ss_pred             ccCCCh-HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccc
Q 021197          143 LSALNQ-IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF  221 (316)
Q Consensus       143 ~~~~~~-~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~  221 (316)
                      +++++. +++++.++.++|+|||||++++||||+|++|.++|+++||||+++|++||+|+++++.++|.++||+++||++
T Consensus       181 ~~~~~~~~~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP~~  260 (296)
T 1aua_A          181 ISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVK  260 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSBGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCcccHHHHHhhCCHhhCcHH
Confidence            998865 4788999999999999999999999999999999999999999999999999987788999999999999999


Q ss_pred             cccCCCCcccccCCCCCCCCC
Q 021197          222 CRKEGSGSSRHIGNGTTENCF  242 (316)
Q Consensus       222 yGg~~GG~~~~~~~~~~~~c~  242 (316)
                      |    ||++.+  ++.+..|.
T Consensus       261 y----GG~~~~--~~~~~g~~  275 (296)
T 1aua_A          261 F----GGKSEV--DESKGGLY  275 (296)
T ss_dssp             G----TSCBCC--CGGGCCST
T ss_pred             h----CCCCCC--CCCCCCce
Confidence            9    888876  33233565

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=100.00  E-value=2.4e-42  Score=321.61  Aligned_cols=216  Identities=16%  Similarity=0.245  Sum_probs=180.3

Q ss_pred             HHHHHHHHHHHhhCchH---HHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC---------------CCCCCHHHHHH
Q 021197            4 QEEIKQFQTLMEDLDDS---LKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM---------------KPILPAELYRA   65 (316)
Q Consensus         4 ~~~i~elr~~l~~~~~~---l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m---------------~~i~~~~~~~~   65 (316)
                      +++|++||+||++.++.   |....+......||.+|+||||||+||+++|.+|               +++.++++...
T Consensus        59 ~~~l~~LR~wi~~~p~l~~~l~~~~~~~~~~~dD~~LlRFLRarkfdv~kA~~~L~~~l~wR~~~~~~~~~~~~~~i~~~  138 (316)
T 3hx3_A           59 EEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCT  138 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTTCHHHHHHHHHTTTCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCGGGTTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCccccccccccccCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCchhhcCCCHHHHHHH
Confidence            57888999999887642   2211111125789999999999999999999998               12334444445


Q ss_pred             HHcccceeecCCCCCCCcEEEEeecCCCCCCcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccC
Q 021197           66 VRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSA  145 (316)
Q Consensus        66 l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~  145 (316)
                      ++.+.+.+++|+|++||||+++++|.+++++.+.+++++++++++|....        ..+.+++|+++|+|++|++++|
T Consensus       139 l~~g~~~~l~g~Dk~GrpVii~r~g~~d~~~~~~~~~~r~~~~~lE~~l~--------~~~~~v~g~v~IiD~~g~sl~~  210 (316)
T 3hx3_A          139 IEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLE--------NEETQINGFCIIENFKGFTMQQ  210 (316)
T ss_dssp             HHTTSSEECSSCCTTSCEEEEEECTTCCTTTSCHHHHHHHHHHHHHHHTT--------SHHHHHHCEEEEEECTTCCHHH
T ss_pred             HHcCCccccCCCCCCCCEEEEEecccCCCCCCCHHHHHHHHHHHHHHHHh--------cccCCcceEEEEEECCCCCHHH
Confidence            66667788999999999999999999999988999999999999997632        1234678999999999999998


Q ss_pred             CCh--HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccccc
Q 021197          146 LNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCR  223 (316)
Q Consensus       146 ~~~--~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~yG  223 (316)
                      ++.  ++.++.++.++|++||++++++||||+|++|.++|+++||||+++|++||+|++++ .++|.++||+++||++| 
T Consensus       211 ~~~~~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~~-~~~L~~~I~~~~LP~ey-  288 (316)
T 3hx3_A          211 AASLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDD-LSGFYQEIDENILPSDF-  288 (316)
T ss_dssp             HHHCCHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEETC-CHHHHHHSCGGGSBGGG-
T ss_pred             hccCChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCCC-HHHHHhhCCHhhCcHhh-
Confidence            742  57899999999999999999999999999999999999999999999999998654 47999999999999999 


Q ss_pred             cCCCCcccc
Q 021197          224 KEGSGSSRH  232 (316)
Q Consensus       224 g~~GG~~~~  232 (316)
                         ||++.+
T Consensus       289 ---GG~~~~  294 (316)
T 3hx3_A          289 ---GGTLPK  294 (316)
T ss_dssp             ---TSSBCC
T ss_pred             ---CCCCCC
Confidence               787753

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=100.00  E-value=3.9e-42  Score=311.40  Aligned_cols=209  Identities=17%  Similarity=0.234  Sum_probs=175.5

Q ss_pred             hHHHHHHHHHHHhhCchHHHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC---------------CCCCCHHHHHHHH
Q 021197            3 HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM---------------KPILPAELYRAVR   67 (316)
Q Consensus         3 ~~~~i~elr~~l~~~~~~l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m---------------~~i~~~~~~~~l~   67 (316)
                      .+++|+|||+++++.+..      ..+...+|.+|+||||||+||+++|.+|               .++.+.++...++
T Consensus         8 ~~~~l~~lr~~l~~~~~~------~~~~~~dd~~LlRFLra~k~dv~~A~~~l~~~l~wR~~~~~i~~~~~~~~~~~~~~   81 (262)
T 1r5l_A            8 LQPGLAALRRRAREAGVP------LAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLK   81 (262)
T ss_dssp             -CTTHHHHHHHHHHHTCC------CSSSCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCHHHHSCCCGGGTHHHHH
T ss_pred             HHHHHHHHHHHHHhCCcc------cCCCCCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhChHhhhcCChHHHHHHHH
Confidence            467899999999876431      0135789999999999999999999998               1233334444455


Q ss_pred             cccceeecCCCCCCCcEEEEeecCCCCCCcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcccCCC
Q 021197           68 DSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLSALN  147 (316)
Q Consensus        68 ~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~~~~  147 (316)
                      .+...+++|+|++||||+++++|.++++..+..+++++.++++|.....        ...+++|+++|+|++|+++++++
T Consensus        82 ~g~~~~l~g~D~~GrpV~i~~~~~~d~~~~~~~~~~r~~~~~~E~~~~~--------~~~~~~g~~~I~D~~g~s~~~~~  153 (262)
T 1r5l_A           82 AGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQE--------VETQRNGIKAIFDLEGWQFSHAF  153 (262)
T ss_dssp             TTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTS--------HHHHHHCEEEEEECTTCCHHHHH
T ss_pred             cCCccCCCCcCCCCCEEEEEeccccCcccCCHHHHHHHHHHHHHHHHhC--------hhhcccceEEEEECCCCCHHHHh
Confidence            5556788999999999999999999998888889999999999975321        11245789999999999999875


Q ss_pred             h--HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccccccC
Q 021197          148 Q--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHFCRKE  225 (316)
Q Consensus       148 ~--~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~yGg~  225 (316)
                      .  +++++.++.++|+||||+++++||||+|++|.++|+++||||+++|++||+|+++++.++|.++|| ++||++|   
T Consensus       154 ~~~~~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~~~~~~L~~~i~-~~LP~~y---  229 (262)
T 1r5l_A          154 QITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLEY---  229 (262)
T ss_dssp             HCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSSCHHHHHHHST-TTSCGGG---
T ss_pred             ccCHHHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCCCcHHHHHHHhh-hhCcHhh---
Confidence            3  578999999999999999999999999999999999999999999999999998777899999999 9999999   


Q ss_pred             CCCcc
Q 021197          226 GSGSS  230 (316)
Q Consensus       226 ~GG~~  230 (316)
                       ||++
T Consensus       230 -GG~~  233 (262)
T 1r5l_A          230 -GGEE  233 (262)
T ss_dssp             -TCSS
T ss_pred             -CCCC
Confidence             5654

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=99.34  E-value=9.2e-13  Score=118.36  Aligned_cols=139  Identities=12%  Similarity=0.036  Sum_probs=114.2

Q ss_pred             HHHcccceeecCCCCCCCcEEEEeecCCCCCCcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCccc
Q 021197           65 AVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKLS  144 (316)
Q Consensus        65 ~l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~~  144 (316)
                      ++.....++-.|.|++||||+++.+++++....+.+.++.+.+..++..           .   -..+.+|+|++|++..
T Consensus         6 ~i~~~~ify~~G~d~dGrpViv~~~~~l~~~~~D~e~Ll~~vl~tl~~~-----------~---~~~y~lV~d~T~~~~~   71 (256)
T 3pg7_A            6 ALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPY-----------Y---AKPYEIVVDLTHTGPS   71 (256)
T ss_dssp             THHHHTSEEEEEECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHHHTTT-----------T---TSCEEEEEECTTCCGG
T ss_pred             HHHHcCCEEEcCcCCCCCEEEEEEeecCCCCCCCHHHHHHHHHHHHHHh-----------c---CCCeEEEEECCCCCcc
Confidence            4555567777899999999999999999887777777777666544321           1   1468999999999998


Q ss_pred             CCChHHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHh-cccCCHhhhcceEEeCCCChhHHHhhCCCCCcc
Q 021197          145 ALNQIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV-KPLLQERTRRKMQVLQGNGRDELLKIMDYASLP  219 (316)
Q Consensus       145 ~~~~~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lv-kpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP  219 (316)
                      +.+..++++.+.+++...|...++++||+|+++||...|+.+ ++|.+.+..+|+++++  ..++|.++|+.++|.
T Consensus        72 n~p~~~wl~~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~--sl~eL~~~i~~~~L~  145 (256)
T 3pg7_A           72 NRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFID--CPGKLAEHIEHEQQK  145 (256)
T ss_dssp             GCCCHHHHHHTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEES--STTGGGGTSCGGGCC
T ss_pred             cCCcHHHHHHHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEEC--CHHHHHhhcCHHHcC
Confidence            877788999999999999999999999999999999776654 5667668889999997  478999999877663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	316
d1olma3	199	c.13.1.1 (A:76-274) Supernatant protein factor (SP	3e-25
d1auaa2	203	c.13.1.1 (A:97-299) C-terminal domain of phosphati	6e-23
d1r5la2	185	c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot	2e-13
d1olma1	75	a.5.3.1 (A:1-75) Supernatant protein factor (SPF),	1e-06
d1auaa1	93	a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl	3e-05

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.2 bits (244), Expect = 3e-25
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 7/155 (4%)

Query: 73  GVSGYSKEGLPVIAVGVGLST----HDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
           G+ GY  +G PV    +G          AS    +++ ++  E   +      + K GR 
Sbjct: 12  GMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQE-CAHQTTKLGRK 70

Query: 129 IGTSLKVLDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVV 186
           + T   + D  GL L  L +  ++       + + NYPE  +  ++V AP +F   + ++
Sbjct: 71  VETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLI 130

Query: 187 KPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
           KP L E TR+K+ VL  N ++ LLK +    +P  
Sbjct: 131 KPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVE 165

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 92.1 bits (228), Expect = 6e-23
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 5/154 (3%)

Query: 73  GVSGYSKEGLPVIAVGVGL----STHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRY 128
                 K+G PV    +G       +   S    +++ +   E   +  LP+ S+  G  
Sbjct: 14  YYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHL 73

Query: 129 IGTSLKVLDMTGLKLSALNQ-IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVK 187
           + TS  ++D+ G+ +S+    +  +   + I    YPE+   +YI+NAP+ FS  +++ K
Sbjct: 74  VETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFK 133

Query: 188 PLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF 221
           P L   T  K+ +L  + + ELLK +   +LP  
Sbjct: 134 PFLDPVTVSKIFILGSSYQKELLKQIPAENLPVK 167

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 2e-13
 Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 11/146 (7%)

Query: 76  GYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKV 135
                G  V+   +        +     +  +  +E           ++          +
Sbjct: 16  SRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSEL--------IVQEVETQRNGIKAI 67

Query: 136 LDMTGLKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQER 193
            D+ G + S   Q    +   I  +   ++P K    +++N P IF A + ++KP L E+
Sbjct: 68  FDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEK 127

Query: 194 TRRKMQVLQGNGRDELLKIMDYASLP 219
            + ++ +  GN   + L       LP
Sbjct: 128 IKERIHMH-GNNYKQSLLQHFPDILP 152

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (102), Expect = 1e-06
 Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 8/51 (15%)

Query: 4  QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM 54
          +E + +F+  ++D+  +L               L+R+L+AR +++ K+  M
Sbjct: 13 KEALAKFRENVQDVLPALPNP--------DDYFLLRWLRARSFDLQKSEAM 55

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.8 bits (93), Expect = 3e-05
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 19 DSLKETFKNVHQGNPTD--TLVRFLKARDWNVSKAHKM 54
            L++  ++       D  TL+RFL+AR ++V  A +M
Sbjct: 35 AELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEM 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	316
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	100.0
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	100.0
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	99.97
d1r5la1	66	Alpha-tocopherol transfer protein {Human (Homo sap	98.7
d1olma1	75	Supernatant protein factor (SPF), N-terminal domai	98.66
d1auaa1	93	N-terminal domain of phosphatidylinositol transfer	98.51

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-41  Score=291.47  Aligned_cols=182  Identities=25%  Similarity=0.385  Sum_probs=165.6

Q ss_pred             HHHcccceeecCCCCCCCcEEEEeecCCCCC----CcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCC
Q 021197           65 AVRDSQLVGVSGYSKEGLPVIAVGVGLSTHD----KASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTG  140 (316)
Q Consensus        65 ~l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~----~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g  140 (316)
                      .++++.++++||+||+||||+++++|++|++    ..+.++++++.++.+|...+. +..++.+.+++++++++|+||+|
T Consensus         4 ~i~~~~p~~~~G~Dk~Grpv~~~r~g~~d~~~l~~~~~~~~~~~~~~~~~E~~~~~-~~~~~~~~~~~v~~~~~I~Dl~g   82 (199)
T d1olma3           4 VIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQE-CAHQTTKLGRKVETITIIYDCEG   82 (199)
T ss_dssp             HHHHHCCBEEEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHH-HHHHHHHHTSCCCCEEEEEECTT
T ss_pred             HHHHHCCCccccCCCCCCEEEEEecccCChHHhhccCCHHHHHHHHHHHHHHHHHH-HHHHHHhcCCccceEEEEEECCC
Confidence            4567899999999999999999999999864    467889999999999998875 34556677889999999999999


Q ss_pred             CcccCCCh--HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCc
Q 021197          141 LKLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASL  218 (316)
Q Consensus       141 ~s~~~~~~--~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~L  218 (316)
                      +++++++.  +++++.++.++|++|||+++++||||+|++|+++|+++||||+++|++||+|+++++.++|.++|++++|
T Consensus        83 ~s~~~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~~~~~~L~~~i~~~~l  162 (199)
T d1olma3          83 LGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQV  162 (199)
T ss_dssp             CCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCGGGS
T ss_pred             CchhhhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCCCCHHHHHHhCCHhhC
Confidence            99999975  5789999999999999999999999999999999999999999999999999987778999999999999


Q ss_pred             ccccccCCCCcccccCCCCCCCCCC---CCchhhhHHH
Q 021197          219 PHFCRKEGSGSSRHIGNGTTENCFS---LDHAFHQRLY  253 (316)
Q Consensus       219 P~~yGg~~GG~~~~~~~~~~~~c~~---~~~~~~~~~y  253 (316)
                      |++|    ||++++  ++++++|..   +|+++|+++|
T Consensus       163 P~~y----GGt~~~--~~~~~~~~~~~~~~~~~p~~~~  194 (199)
T d1olma3         163 PVEY----GGTMTD--PDGNPKCKSKINYGGDIPRKYY  194 (199)
T ss_dssp             BGGG----TSSBCC--TTCCTTCTTTCBCCCCCCGGGC
T ss_pred             CHHh----CCCCCC--CCCChhhhccCCCCCcCCHHHh
Confidence            9999    999988  789999874   4889999998

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-36  Score=263.45  Aligned_cols=164  Identities=25%  Similarity=0.370  Sum_probs=150.4

Q ss_pred             HHHcccceeecCCCCCCCcEEEEeecCCCCC----CcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCC
Q 021197           65 AVRDSQLVGVSGYSKEGLPVIAVGVGLSTHD----KASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTG  140 (316)
Q Consensus        65 ~l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~----~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g  140 (316)
                      .+.++.++++||+|++||||+|+++|++++.    ..+.+++++++++.+|+..+..++......+..++++++|+||+|
T Consensus         6 ~~~~~~p~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g   85 (203)
T d1auaa2           6 LIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKG   85 (203)
T ss_dssp             HHGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTT
T ss_pred             HHHHHCCCcCCCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCC
Confidence            4567999999999999999999999999864    457889999999999999887777777777889999999999999


Q ss_pred             CcccCCCh-HHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcc
Q 021197          141 LKLSALNQ-IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLP  219 (316)
Q Consensus       141 ~s~~~~~~-~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP  219 (316)
                      +++++++. +.+++.+++++|++||++++++||||+|++|+++|+++||||+++|++||+|+++++.+.|.++||+++||
T Consensus        86 ~s~~~~~~~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~~~~~L~~~id~~~LP  165 (203)
T d1auaa2          86 ISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP  165 (203)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSB
T ss_pred             CChHHhhhHHHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCCCCHHHHHhhCCHhhCh
Confidence            99998864 47789999999999999999999999999999999999999999999999999888899999999999999


Q ss_pred             cccccCCCCcccc
Q 021197          220 HFCRKEGSGSSRH  232 (316)
Q Consensus       220 ~~yGg~~GG~~~~  232 (316)
                      .+|    ||++++
T Consensus       166 ~~~----GG~~~~  174 (203)
T d1auaa2         166 VKF----GGKSEV  174 (203)
T ss_dssp             GGG----TSCBCC
T ss_pred             HHh----CCCCcC
Confidence            999    888876

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-31  Score=227.86  Aligned_cols=152  Identities=14%  Similarity=0.152  Sum_probs=132.2

Q ss_pred             HHHHcccceeecCCCCCCCcEEEEeecCCCCCCcCHHHHHHHHHHHHHHHHhhcchhhhhhhCCCcccEEEEEeCCCCcc
Q 021197           64 RAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLKL  143 (316)
Q Consensus        64 ~~l~~~~~~~~~G~Dk~GrPV~~~~~g~~~~~~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~v~~~v~I~Dl~g~s~  143 (316)
                      ..++.+.++.++|+|++||||+++++|++|++..+..++++..++++|...+   +     ...+++|+++|+||+|+++
T Consensus         4 ~~l~~g~~~~lp~rD~~Gr~v~~~r~~~~d~~~~~~~~~~r~~~~~~e~~~~---~-----~~~~~~g~~~I~D~~g~s~   75 (185)
T d1r5la2           4 GLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQ---E-----VETQRNGIKAIFDLEGWQF   75 (185)
T ss_dssp             HHHHTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTT---S-----HHHHHHCEEEEEECTTCCH
T ss_pred             HHHHcCCceecCCCCcCcCEEEEEEcccCCCCCCCHHHHHHHHHHHHHHHHh---c-----cccCCceEEEEEECCCCCH
Confidence            4566777888999999999999999999999999999999999988886422   1     1234578999999999999


Q ss_pred             cCCC--hHHHHHHHHHhhhhcCccccccEEEEcCChhHHHHHHHhcccCCHhhhcceEEeCCCChhHHHhhCCCCCcccc
Q 021197          144 SALN--QIKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPHF  221 (316)
Q Consensus       144 ~~~~--~~~~~~~~~~i~q~~YPe~l~~i~iVNaP~~f~~~~~lvkpfL~~~t~~Ki~~~~~~~~~~L~k~i~~~~LP~~  221 (316)
                      ++++  .+++++.+++++|++||+|++++||||+|++|.++|+++||||+++|++||+|++++ .+++..++++++||.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~~~-~~~~~~~~~~~~LP~~  154 (185)
T d1r5la2          76 SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNN-YKQSLLQHFPDILPLE  154 (185)
T ss_dssp             HHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSS-CHHHHHHHSTTTSCGG
T ss_pred             HHhhhccHHHHHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEeccc-hHHHHhhcCHHhCCHh
Confidence            9874  368999999999999999999999999999999999999999999999999998754 4567777889999999


Q ss_pred             ccc
Q 021197          222 CRK  224 (316)
Q Consensus       222 yGg  224 (316)
                      |||
T Consensus       155 ~GG  157 (185)
T d1r5la2         155 YGG  157 (185)
T ss_dssp             GTC
T ss_pred             cCC
Confidence            943

>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.2e-09  Score=74.21  Aligned_cols=45  Identities=20%  Similarity=0.304  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHhhCchHHHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC
Q 021197            4 QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM   54 (316)
Q Consensus         4 ~~~i~elr~~l~~~~~~l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m   54 (316)
                      ++||+|||++|.+....      ..+...+|.+|+||||||+||+++|.+|
T Consensus         1 q~aL~elR~~l~~~~~p------~lp~~~dD~~LlrFLRarkf~~~ka~~~   45 (66)
T d1r5la1           1 QPGLAALRRRAREAGVP------LAPLPLTDSFLLRFLRARDFDLDLAWRL   45 (66)
T ss_dssp             CTTHHHHHHHHHHHTCC------CSSSCCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred             CHHHHHHHHHHHHcCCC------cCCCCCCHHHHHHHHHHccCCHHHHHHH
Confidence            46899999999766321      1245678999999999999999999998

>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: Supernatant protein factor (SPF), N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=7.5e-09  Score=73.46  Aligned_cols=44  Identities=23%  Similarity=0.443  Sum_probs=37.0

Q ss_pred             hHHHHHHHHHHHhhCchHHHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC
Q 021197            3 HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM   54 (316)
Q Consensus         3 ~~~~i~elr~~l~~~~~~l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m   54 (316)
                      .+++|+|||+++......        ....||.+|+||||||+||+++|.+|
T Consensus        12 q~~~l~elr~~l~~~~~~--------~~~~dd~~LlRFLrAr~fdv~kA~~m   55 (75)
T d1olma1          12 QKEALAKFRENVQDVLPA--------LPNPDDYFLLRWLRARSFDLQKSEAM   55 (75)
T ss_dssp             HHHHHHHHHHHHGGGGGG--------SSCCCHHHHHHHHHHTTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccc--------CCCCCHHHHHHHHHHCCCCHHHHHHH
Confidence            367899999999765432        34678999999999999999999999

>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: CRAL/TRIO N-terminal domain
family: CRAL/TRIO N-terminal domain
domain: N-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=3.1e-08  Score=73.03  Aligned_cols=43  Identities=30%  Similarity=0.518  Sum_probs=37.4

Q ss_pred             hHHHHHHHHHHHhhCchHHHHHHhhccCCCCHHHHHHHHhcCCCChHHHccC
Q 021197            3 HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKM   54 (316)
Q Consensus         3 ~~~~i~elr~~l~~~~~~l~~~~~~~~~~~~D~~LlRFLrar~fdv~kA~~m   54 (316)
                      .++++++||+++...+.         ....||.+|+||||||+||+++|.+|
T Consensus        30 q~~~L~elr~~l~~~~~---------~~~~DD~~llRfLrAr~fd~~~a~~m   72 (93)
T d1auaa1          30 QEKALAELRKLLEDAGF---------IERLDDSTLLRFLRARKFDVQLAKEM   72 (93)
T ss_dssp             HHHHHHHHHHHHHHTTC---------CSSCSHHHHHHHHHHTTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCC---------CCCCCHHHHHHHHHHccCCHHHHHHH
Confidence            36789999999987643         35788999999999999999999999