Citrus Sinensis ID: 021207

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHDKS
ccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccHHHHHHHHHHccccccccEEcccccccccHHHHHHHHHccccccccccccccccccccccHHccHHHHHHHHcccccccccHHHccccccHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHccccccccccccccHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEccccccccccccccc
MGTKAVFLLLALLSFSAVSLRSALaeneedpglvmnfykdtcpqAEDIIREQVKLLYKRHKNTAFSWLRNIFhdcavqscdaslLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVerecpgvvscaDILVLSGRDgvvalggpyiplktgrrdgrKSRAEILEQylpdhndsMSVVLERFAAIGIDAPGLVALlevdpalnpdhvphmlhkcpdaipdpkavqyvrndrgtpmvldnnyyrnildnkglmmvdhqlatdkrtrpyvKKMAKSQDYFFKEFSRAITLLsennpltgtkgEIRKVCNLANKLHDKS
MGTKAVFLLLALLSFSAVSLRSALAeneedpglVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDStrktlsekemdrsfgmRNFRYIENIKEAVERECPGVVSCADILVLSGRdgvvalggpyiplktgrrdgrkSRAEILEqylpdhndSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNdrgtpmvldnNYYRNILDNKGLMMVDHQLatdkrtrpyvKKMAKSQDYFFKEFSRAITLLsennpltgtkgeiRKVCNLANKLHDKS
MGTKavflllallsfsavslrsalaENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHDKS
****AVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDS************SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT***********ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNL********
*****VFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR*****KEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHVPHMLHKCP******KAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN**NK*****
MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHDKS
***KAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHVPHMLHKCPDAI****AVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN*********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHDKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query316 2.2.26 [Sep-21-2011]
Q9SB81330 Peroxidase 42 OS=Arabidop yes no 0.984 0.942 0.762 1e-148
Q42580327 Peroxidase 21 OS=Arabidop no no 0.879 0.850 0.536 3e-91
Q9SK52329 Peroxidase 18 OS=Arabidop no no 0.863 0.829 0.351 3e-43
Q9SI17337 Peroxidase 14 OS=Arabidop no no 0.962 0.902 0.319 4e-43
Q43387328 Peroxidase 71 OS=Arabidop no no 0.949 0.914 0.323 4e-43
Q9FJZ9336 Peroxidase 72 OS=Arabidop no no 0.971 0.913 0.332 5e-43
O81755404 Putative Peroxidase 48 OS no no 0.908 0.710 0.303 7e-43
Q9FLC0324 Peroxidase 52 OS=Arabidop no no 0.873 0.851 0.340 7e-43
Q9SI16338 Peroxidase 15 OS=Arabidop no no 0.857 0.801 0.333 8e-43
O23237331 Peroxidase 49 OS=Arabidop no no 0.870 0.830 0.335 1e-42
>sp|Q9SB81|PER42_ARATH Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2 Back     alignment and function desciption
 Score =  523 bits (1347), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 253/332 (76%), Positives = 282/332 (84%), Gaps = 21/332 (6%)

Query: 1   MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRH 60
           MG K V +++A+L   A+S  S  A  E +PGL+MNFYKDTCPQAEDI+REQVKLLYKRH
Sbjct: 1   MGGKGV-MMVAILCLWALSATSE-AVTEAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRH 58

Query: 61  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERE 120
           KNTAFSWLRNIFHDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNFRYIE IKEA+ERE
Sbjct: 59  KNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERE 118

Query: 121 CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLE 180
           CPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE
Sbjct: 119 CPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLE 178

Query: 181 RFAAIGIDAPGLVALL-------------------EVDPALNPDHVPHMLHKCPDAIPDP 221
           +F +IGID PGLVALL                   EVDP+LNPDHVPHMLHKCPD+IPDP
Sbjct: 179 KFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDP 238

Query: 222 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKE 281
           KAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKE
Sbjct: 239 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKE 298

Query: 282 FSRAITLLSENNPLTGTKGEIRKVCNLANKLH 313
           F+RAI +LSENNPLTG+KGEIRK CNLANK H
Sbjct: 299 FTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330
Might function as heat shock-like defense protein.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q42580|PER21_ARATH Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1 Back     alignment and function description
>sp|Q9SK52|PER18_ARATH Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1 Back     alignment and function description
>sp|Q9SI17|PER14_ARATH Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=3 SV=1 Back     alignment and function description
>sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1 Back     alignment and function description
>sp|Q9FJZ9|PER72_ARATH Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1 Back     alignment and function description
>sp|O81755|PER48_ARATH Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3 Back     alignment and function description
>sp|Q9FLC0|PER52_ARATH Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1 Back     alignment and function description
>sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
224076226331 predicted protein [Populus trichocarpa] 0.987 0.942 0.816 1e-159
290760238332 peroxidase [Bruguiera gymnorhiza] 0.987 0.939 0.804 1e-157
167367332 peroxidase [Gossypium hirsutum] 0.977 0.930 0.810 1e-157
251826416337 peroxidase [Camellia oleifera] 0.987 0.925 0.789 1e-154
125620184331 cationic peroxidase [Nelumbo nucifera] 0.987 0.942 0.786 1e-153
341819281338 class III peroxidase [Hevea brasiliensis 0.917 0.857 0.834 1e-153
307136213331 peroxidase [Cucumis melo subsp. melo] 0.939 0.897 0.822 1e-153
225444515334 PREDICTED: peroxidase 42 isoform 1 [Viti 0.939 0.889 0.823 1e-152
427199292333 basic peroxidase swpb6 [Ipomoea batatas] 0.974 0.924 0.801 1e-152
402228004330 peroxidase [Fragaria x ananassa] 0.908 0.869 0.830 1e-151
>gi|224076226|ref|XP_002304909.1| predicted protein [Populus trichocarpa] gi|118487860|gb|ABK95753.1| unknown [Populus trichocarpa] gi|222847873|gb|EEE85420.1| predicted protein [Populus trichocarpa] gi|225626261|gb|ACN97180.1| peroxidase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  567 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 271/332 (81%), Positives = 298/332 (89%), Gaps = 20/332 (6%)

Query: 1   MGTKAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRH 60
           M  KA+F   ALLSFSAVS+R ALAENEEDPGLVMNFYKDTCPQAEDI++EQV+LLYKRH
Sbjct: 1   MDAKALFFF-ALLSFSAVSVRPALAENEEDPGLVMNFYKDTCPQAEDIVKEQVRLLYKRH 59

Query: 61  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERE 120
           KNTAFSWLRNIFHDCAVQSCDASLLLDSTR+TLSEKE DRSFG+RNFRY ++IKEAVERE
Sbjct: 60  KNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYFDDIKEAVERE 119

Query: 121 CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLE 180
           CPGVVSCADILVLS RDG+V+LGGP+IPLKTGRRDGRKSRA+++E YLPDHN+S+SVVL+
Sbjct: 120 CPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRKSRADVIEDYLPDHNESISVVLD 179

Query: 181 RFAAIGIDAPGLVALL-------------------EVDPALNPDHVPHMLHKCPDAIPDP 221
           RFA++GID PGLVALL                   EVDPALNPDHV HML+KCPD+IPDP
Sbjct: 180 RFASMGIDTPGLVALLGAHSVGRTHCVKLVHRLYPEVDPALNPDHVEHMLYKCPDSIPDP 239

Query: 222 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKE 281
           KAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLATDKRT+PYVKKMAKSQDYFFKE
Sbjct: 240 KAVQYVRNDRGTPMVLDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKSQDYFFKE 299

Query: 282 FSRAITLLSENNPLTGTKGEIRKVCNLANKLH 313
           FSRAIT+LSENNPLTGTKGEIRK C +ANK H
Sbjct: 300 FSRAITILSENNPLTGTKGEIRKQCTVANKHH 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|290760238|gb|ADD54644.1| peroxidase [Bruguiera gymnorhiza] Back     alignment and taxonomy information
>gi|167367|gb|AAA99868.1| peroxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|251826416|gb|ACT21094.1| peroxidase [Camellia oleifera] Back     alignment and taxonomy information
>gi|125620184|gb|ABN46984.1| cationic peroxidase [Nelumbo nucifera] Back     alignment and taxonomy information
>gi|341819281|gb|AEK87128.1| class III peroxidase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|307136213|gb|ADN34050.1| peroxidase [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|225444515|ref|XP_002274769.1| PREDICTED: peroxidase 42 isoform 1 [Vitis vinifera] gi|147768417|emb|CAN60224.1| hypothetical protein VITISV_039918 [Vitis vinifera] Back     alignment and taxonomy information
>gi|427199292|gb|AFY26877.1| basic peroxidase swpb6 [Ipomoea batatas] Back     alignment and taxonomy information
>gi|402228004|gb|AFQ36035.1| peroxidase [Fragaria x ananassa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
TAIR|locus:2141637330 PRXR1 [Arabidopsis thaliana (t 0.712 0.681 0.652 2.4e-76
TAIR|locus:2061794327 AT2G37130 [Arabidopsis thalian 0.699 0.675 0.495 7.2e-52
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.525 0.491 0.398 7.6e-44
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.512 0.480 0.412 9.6e-44
TAIR|locus:2047380329 AT2G24800 [Arabidopsis thalian 0.506 0.486 0.411 9.6e-44
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.515 0.492 0.402 2e-43
TAIR|locus:2154925336 AT5G66390 [Arabidopsis thalian 0.515 0.485 0.402 2e-43
TAIR|locus:2080928344 AT3G50990 [Arabidopsis thalian 0.506 0.465 0.409 1.4e-42
TAIR|locus:2086047339 AT3G17070 [Arabidopsis thalian 0.585 0.545 0.319 1.8e-42
TAIR|locus:2174693330 AT5G14130 [Arabidopsis thalian 0.528 0.506 0.394 9.5e-42
TAIR|locus:2141637 PRXR1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
 Identities = 150/230 (65%), Positives = 184/230 (80%)

Query:    28 EEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLD 87
             E +PGL+MNFYKDTCPQAEDI+REQVKLLYKRHKNTAFSWLRNIFHDCAV+SCDASLLLD
Sbjct:    26 EAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLD 85

Query:    88 STRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYI 147
             STR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYI
Sbjct:    86 STRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYI 145

Query:   148 PLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEVDPALNPDHV 207
             PLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALL    ++   H 
Sbjct:   146 PLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLG-SHSVGRTHC 204

Query:   208 PHMLHKC-PDAIP--DPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMV 254
               ++H+  P+  P  +P  V ++ + +    + D    + + +++G  MV
Sbjct:   205 VKLVHRLYPEVDPSLNPDHVPHMLH-KCPDSIPDPKAVQYVRNDRGTPMV 253
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006833 "water transport" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0030003 "cellular cation homeostasis" evidence=RCA
GO:0070838 "divalent metal ion transport" evidence=RCA
TAIR|locus:2061794 AT2G37130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2047380 AT2G24800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154925 AT5G66390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080928 AT3G50990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086047 AT3G17070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174693 AT5G14130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SB81PER42_ARATH1, ., 1, 1, ., 1, ., 70.76200.98410.9424yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PO1
SubName- Full=Putative uncharacterized protein; (331 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XIV.3012.1
aspartate transaminase (EC-2.6.1.1) (403 aa)
     •  0.899
gw1.VI.2755.1
aspartate transaminase (EC-2.6.1.1) (397 aa)
     •  0.899
gw1.41.216.1
histidinol-phosphate aminotransferase (366 aa)
     •  0.899
gw1.28.655.1
annotation not avaliable (78 aa)
     •  0.899
f5h
SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)
     •  0.899
grail3.0013044701
aspartate transaminase (EC-2.6.1.1) (466 aa)
     •  0.899
PAL
RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)
     •  0.899
SAD
SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa)
     •  0.899
fgenesh4_pg.C_scaffold_803000002
hypothetical protein (316 aa)
     •  0.899
AMT7
aminotransferase family protein (EC-2.6.1.5) (407 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-126
pfam00141180 pfam00141, peroxidase, Peroxidase 9e-57
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 3e-56
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 4e-21
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 2e-15
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 1e-09
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 4e-08
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 3e-06
cd00692328 cd00692, ligninase, Ligninase and other manganese- 6e-06
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 6e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  361 bits (929), Expect = e-126
 Identities = 120/300 (40%), Positives = 159/300 (53%), Gaps = 28/300 (9%)

Query: 32  GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK 91
            L + FY  +CP AE I+R  V+   K     A + LR  FHDC V+ CDAS+LLDST  
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 92  TLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT 151
             SEK+   +  +R F  I++IK A+E  CPGVVSCADIL L+ RD VV  GGP   +  
Sbjct: 61  NTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 152 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL--------------- 196
           GRRDGR S A      LP    S+S ++  FA+ G+    LVAL                
Sbjct: 121 GRRDGRVSSAN-DVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSD 179

Query: 197 ---------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 247
                    + DP L+P +   +  KCP    D      V  D GTP   DN+YY+N+L 
Sbjct: 180 RLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDD---TLVPLDPGTPNTFDNSYYKNLLA 236

Query: 248 NKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 307
            +GL+  D  L +D RTR  V + A +QD FF++F+ A+  +     LTG++GEIRK C 
Sbjct: 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCR 296

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 316
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.95
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.61
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.1e-96  Score=697.25  Aligned_cols=274  Identities=39%  Similarity=0.653  Sum_probs=258.5

Q ss_pred             CCCCCCCccccCCccHHHHHHHHHHHHHHhCcCchhhHHHHHhccccccCCCCccccccccCCcccccccCCCCcchHHH
Q 021207           30 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRY  109 (316)
Q Consensus        30 ~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~t~~~~~E~~~~~N~gL~g~~~  109 (316)
                      .++|+++||++|||++|+||+++|++.+.++|+++|++|||+||||||+||||||||+++   ..||++++|.+|+||++
T Consensus        22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~~   98 (324)
T PLN03030         22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYDV   98 (324)
T ss_pred             hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHHH
Confidence            467999999999999999999999999999999999999999999999999999999865   36999999999999999


Q ss_pred             HHHHHHHHHhhCCCCccHHHHHHHhhhHHHHhhCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCc
Q 021207          110 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDA  189 (316)
Q Consensus       110 Id~iK~~le~~cp~~VScADiialAardav~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~  189 (316)
                      ||.||+++|+.||++|||||||||||||||+++|||.|+|++||||+++|.+.++. +||.|+.++++|++.|+++||+.
T Consensus        99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~  177 (324)
T PLN03030         99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLNT  177 (324)
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999877664 89999999999999999999999


Q ss_pred             ccceeeecc-------------------------CCCCCcchhhhhhccCCCCCCCCCCCccccCCCCCCCccChHHHHH
Q 021207          190 PGLVALLEV-------------------------DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRN  244 (316)
Q Consensus       190 ~dlVaLsg~-------------------------~pti~~~~~~~l~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~  244 (316)
                      +|||+|||+                         ||+||+.|+..|++.||. .++..+  .+++|+.||.+|||+||++
T Consensus       178 ~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~-~~~~~~--~~~lD~~Tp~~FDn~Yy~n  254 (324)
T PLN03030        178 QDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQ-NGDGSR--RIALDTGSSNRFDASFFSN  254 (324)
T ss_pred             HHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCC-CCCCCc--cccCCCCCCcccccHHHHH
Confidence            999999943                         678999999999999996 222233  5789999999999999999


Q ss_pred             HhhcCCCcccccccccCcCcHHHHHHHhhcH----HHHHHHHHHHHHHhhhCCCCCCCCCcccccccccc
Q 021207          245 ILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ----DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN  310 (316)
Q Consensus       245 l~~~~gll~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~F~~Am~Km~~l~v~tg~~GeiR~~C~~~n  310 (316)
                      |+.++|+|+|||.|++|++|+++|++||.|+    +.|+++|++||+|||+|+|+||.+||||++|+++|
T Consensus       255 ll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        255 LKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            9999999999999999999999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 4e-42
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 7e-42
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 2e-39
1sch_A294 Peanut Peroxidase Length = 294 7e-38
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 7e-36
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 1e-35
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 2e-35
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-35
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-35
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 2e-35
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 2e-35
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 2e-35
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 2e-35
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 2e-35
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-35
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-34
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 7e-34
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 3e-33
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 2e-28
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 1e-09
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 2e-09
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 7e-09
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 8e-09
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 1e-08
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-08
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 1e-08
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 1e-08
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 1e-08
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 1e-08
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-08
3ccx_A294 Altering Substrate Specificity At The Heme Edge Of 2e-08
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 2e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 2e-08
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 2e-08
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-08
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 2e-08
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 2e-08
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 3e-08
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 3e-08
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 3e-08
1cyf_A296 Identifying The Physiological Electron Transfer Sit 4e-08
1cce_A291 Construction Of A Bis-Aquo Heme Enzyme And Replacem 4e-08
1ds4_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 4e-08
1dse_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 4e-08
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 4e-08
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 4e-08
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 5e-08
4ccx_A294 Altering Substrate Specificity At The Heme Edge Of 5e-08
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 5e-08
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 5e-08
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 5e-08
7ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 5e-08
5ccp_A296 Histidine 52 Is A Critical Residue For Rapid Format 5e-08
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 5e-08
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 5e-08
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 5e-08
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 5e-08
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 5e-08
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 6e-08
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 6e-08
1dcc_A296 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo 6e-08
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 6e-08
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 7e-08
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 7e-08
3m23_A291 Crystallographic And Single Crystal Spectral Analys 8e-08
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 8e-08
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 8e-08
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 8e-08
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 8e-08
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 9e-08
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 1e-07
1cmu_A294 The Role Of Aspartate-235 In The Binding Of Cations 1e-07
1bem_A291 Interaction Between Proximal And Distals Regions Of 1e-07
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 1e-07
1bej_A291 Interaction Between Proximal And Distals Regions Of 1e-07
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 1e-07
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 1e-07
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 1e-07
1ccb_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 1e-07
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 1e-07
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 1e-07
2ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 2e-07
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 2e-07
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 2e-07
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 2e-07
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 2e-07
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 2e-07
1beq_A291 Interaction Between Proximal And Distals Regions Of 2e-07
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 3e-07
1ccc_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 3e-07
2ia8_A291 Kinetic And Crystallographic Studies Of A Redesigne 4e-07
3e2o_A294 Crystal Structure Of Cytochrome C Peroxidase, N184r 5e-07
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 1e-06
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 2e-06
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 2e-06
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 8e-05
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  168 bits (425), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 30/297 (10%)
Query: 37  FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 96
           FY  TCP A  I+R  ++   +       S +R  FHDC V  CDAS+LLD T    SEK
Sbjct: 7   FYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEK 66
Query: 97  EMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 155
               +    R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  GRRD
Sbjct: 67  NAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRD 126
Query: 156 GRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLEV----------------- 198
              +        +P   +S+S +  +F+A+G++   LVAL                    
Sbjct: 127 SLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFN 186
Query: 199 -------DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL 251
                  DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL
Sbjct: 187 FSGTGNPDPTLNSTLLSTLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNDGL 243
Query: 252 MMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 306
           +  D +L   T   T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  C
Sbjct: 244 LQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 300
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 Back     alignment and structure
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 Back     alignment and structure
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 5e-94
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 7e-94
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 2e-93
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 2e-92
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 2e-91
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 4e-90
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 2e-86
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 6e-52
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 7e-51
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 4e-50
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 9e-46
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-43
2e39_A344 Peroxidase; heme protein, coordination geometry of 3e-43
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 2e-40
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 7e-18
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 5e-15
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
 Score =  279 bits (717), Expect = 5e-94
 Identities = 99/296 (33%), Positives = 130/296 (43%), Gaps = 21/296 (7%)

Query: 33  LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKT 92
           L  NFY   CP A   I+  V     +      S LR  FHDC VQ CDAS+LLD T   
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61

Query: 93  LSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT 151
             EK    +   +R F  I+ IK  VE  CPGVVSCADIL ++ RD VVALGG    +  
Sbjct: 62  TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121

Query: 152 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL---------------- 195
           GRRD   +        LP    ++S ++  F+  G     LV L                
Sbjct: 122 GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRT 181

Query: 196 -LEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMV 254
            +  +  ++P +   +   CP    D         D  TP   DN YY N+ + KGL+  
Sbjct: 182 RIYNESNIDPTYAKSLQANCPSVGGDTNLSP---FDVTTPNKFDNAYYINLRNKKGLLHS 238

Query: 255 DHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 310
           D QL     T   V   + +   F  +F  A+  +   +PLTGT G+IR  C   N
Sbjct: 239 DQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1e-98  Score=711.96  Aligned_cols=275  Identities=34%  Similarity=0.539  Sum_probs=265.1

Q ss_pred             CCCCccccCCccHHHHHHHHHHHHHHhCcCchhhHHHHHhccccccCCCCccccccccCCcccccccCCC-CcchHHHHH
Q 021207           33 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIE  111 (316)
Q Consensus        33 L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~t~~~~~E~~~~~N~-gL~g~~~Id  111 (316)
                      |+++||++|||++|+|||++|++++.++|+++|++||||||||||+||||||||++++++.+|+++++|. ||+||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999999888999999999 899999999


Q ss_pred             HHHHHHHhhCCCCccHHHHHHHhhhHHHHhhCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCccc
Q 021207          112 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG  191 (316)
Q Consensus       112 ~iK~~le~~cp~~VScADiialAardav~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~d  191 (316)
                      +||++||+.||++||||||||||||+||+++|||.|+|++||+|++++...+++++||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             ceeeecc------------------------CCCCCcchhhhhhccCCCCCCC--CCCCccccCCCCCCCccChHHHHHH
Q 021207          192 LVALLEV------------------------DPALNPDHVPHMLHKCPDAIPD--PKAVQYVRNDRGTPMVLDNNYYRNI  245 (316)
Q Consensus       192 lVaLsg~------------------------~pti~~~~~~~l~~~Cp~~~~~--~~~~~~~~~D~~tp~~FDN~Yy~~l  245 (316)
                      ||||||+                        ||+|++.|++.|+..||. +++  +.+  .+++|+.||.+|||+||++|
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~-~~~~~~~~--~~~lD~~TP~~FDN~Yy~nL  238 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPA-NSTRFTPI--TVSLDIITPSVLDNMYYTGV  238 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCT-TCCTTSCC--EEESCSSSTTSCSTHHHHHH
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCC-CCCCCCcc--ccCCCCCCcccccHHHHHHH
Confidence            9999943                        688999999999999997 443  344  68999999999999999999


Q ss_pred             hhcCCCcccccccccCcCcHHHHHHHhhcHHHHHHHHHHHHHHhhhCCCCCCCCCcccccccccc
Q 021207          246 LDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN  310 (316)
Q Consensus       246 ~~~~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~l~v~tg~~GeiR~~C~~~n  310 (316)
                      +.++|+|+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|+++|
T Consensus       239 ~~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          239 QLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             HTTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             HhCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 316
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 9e-92
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 2e-90
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 6e-89
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 5e-88
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 9e-88
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 3e-84
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 3e-47
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 2e-46
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 4e-42
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 3e-34
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-30
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 2e-30
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 0.001
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 0.002
d1ub2a1406 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Syne 0.004
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 0.004
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]

 Score =  273 bits (699), Expect = 9e-92
 Identities = 100/305 (32%), Positives = 140/305 (45%), Gaps = 30/305 (9%)

Query: 33  LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKT 92
           L   FY  TCP A  I+R  ++   +       S +R  FHDC V  CDAS+LLD T   
Sbjct: 3   LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62

Query: 93  LSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKT 151
            SEK    +    R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  
Sbjct: 63  QSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLL 122

Query: 152 GRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL--------------- 196
           GRRD   +        +P   +S+S +  +F+A+G++   LVAL                
Sbjct: 123 GRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNN 182

Query: 197 ---------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 247
                      DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  
Sbjct: 183 RLFNFSGTGNPDPTLNSTLLSTLQQLCP---QNGSASTITNLDLSTPDAFDNNYFANLQS 239

Query: 248 NKGLMMVDHQLA--TDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKV 305
           N GL+  D +L   T   T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  
Sbjct: 240 NDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLD 299

Query: 306 CNLAN 310
           C   N
Sbjct: 300 CKKVN 304
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 406 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.97
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2.4e-94  Score=681.83  Aligned_cols=277  Identities=33%  Similarity=0.531  Sum_probs=264.5

Q ss_pred             CCCCCccccCCccHHHHHHHHHHHHHHhCcCchhhHHHHHhccccccCCCCccccccccCCcccccccCCCCc-chHHHH
Q 021207           32 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYI  110 (316)
Q Consensus        32 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDcfv~GcDgSill~~t~~~~~E~~~~~N~gL-~g~~~I  110 (316)
                      ||+.+||++|||++|+||+++|++.+.+||+++|++|||+||||||+||||||||++++++.+|+++++|.++ +||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            7999999999999999999999999999999999999999999999999999999999888899999999965 999999


Q ss_pred             HHHHHHHHhhCCCCccHHHHHHHhhhHHHHhhCCCCccccCCCCCCCCCchhhhhccCCCCCCCHHHHHHHHHHcCCCcc
Q 021207          111 ENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP  190 (316)
Q Consensus       111 d~iK~~le~~cp~~VScADiialAardav~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~  190 (316)
                      |.||++||+.||++||||||||||||+||+++|||.|+|++||+|+++|+..++..+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             cceeeecc------------------------CCCCCcchhhhhhccCCCCCCCCCCCccccCCCCCCCccChHHHHHHh
Q 021207          191 GLVALLEV------------------------DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL  246 (316)
Q Consensus       191 dlVaLsg~------------------------~pti~~~~~~~l~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~  246 (316)
                      |||||||+                        +|++++.|+..|+..||. .+...+  .+++|+.||.+|||+||++++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~-~~~~~~--~~~~d~~tp~~fDn~Yy~~l~  237 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQ-NATGDN--LTNLDLSTPDQFDNRYYSNLL  237 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCS-SCSSCC--EEESCSSSTTSCSTHHHHHHH
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCC-CCCCCc--ccccCCCCCCccccHHHHHHh
Confidence            99999954                        467889999999999997 443444  678999999999999999999


Q ss_pred             hcCCCcccccccccCc--CcHHHHHHHhhcHHHHHHHHHHHHHHhhhCCCCCCCCCccccccccccC
Q 021207          247 DNKGLMMVDHQLATDK--RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK  311 (316)
Q Consensus       247 ~~~gll~SD~~L~~d~--~t~~~V~~yA~d~~~F~~~F~~Am~Km~~l~v~tg~~GeiR~~C~~~n~  311 (316)
                      .++|+|+||++|+.||  +|+++|++||.||++|+++|++||+||++|+|+||.+||||++|+++|.
T Consensus       238 ~~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N~  304 (304)
T d1fhfa_         238 QLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             TTCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCCC
T ss_pred             hcCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcCC
Confidence            9999999999999996  7999999999999999999999999999999999999999999999994
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure