Citrus Sinensis ID: 021244

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-----
Protein Sequence
MLMRGMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLILFMLFCIAVADLVVLLFK
Secondary Structure (PSIPRED)
cHHHHHHHccccccccccccccccccccccccccHHcHHHHHHHHcccccccccccHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEHHccc
Secondary Structure Prediction (SSPRO)
cccccEEEccccccccccccccccccccccccEEEEcHHHHHHHHcccccccccccHHHHHHHcccHHHHHccccccccccHcccccccccccHcHHcHHHHHHHHHHcccccccccccccccccHccHHHHHHHcccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mlmrgmqmmgsqadgssngkqsqfqplarqnsmYSLTLDEVQNQLgdlgkplssmnlDELLKNVWTAEVEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQskssgekkprdrqatlgemTLEDFLVKAGVVaeassdkkidgpvvgvdqnvvphfpqqgpwmpyphpqyqhsqqsmmgvympgqpipqpmnmvtgavmdvsfpenqvgltspsmgtlsdpqllgrkrgaseDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLILFMLFCIAVADLVVLLFK
Flexible Loop (DISEMBL)
MLMRGMQMMgsqadgssngkQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTlaeqtslqrqaSLSLTsalskktvdeVWRDiqqskssgekkprdrqATLGEMTLEDFLVKAGVVAEassdkkidgpvVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLtspsmgtlsdpqllgrkrgasedmiEKTVerrqkrmiknresaarsrarkqaytnelenkvsrleeENERLRKQKVGFLILFMLFCIAVADLVVLLFK
Low Complexity Region (SEG)
MLMRGMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEqtslqrqaslsltsalskktVDEVWRDIQQSKSSGEKKPRDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWmpyphpqyqhsqqsmmGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLILFMLFCIAVADLVVLLFK
Disordered region (IsUnstruct)
********************************************************LDELLKNVWTAEVE*********************************************************TLEDFLVKAGVVAEA*****IDGPVVGVDQNVVPHFP****W*************************************************************************************************************************QKVGFLILFMLFCIAVADLVVLLF*
Disordered Region (DISOPRED)
**********************************SLTLDEVQNQLGDLGKPLSSMNLDELLKNVW**********************************DEV**********************************************************************************************************************************************************************AYTNELENKVSRLEEENERLRKQKVGFLILFMLFCIAVADLVVLLFK
Disordered Region (DISEMBL)
************************QPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDI**************QATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKR***************QAYTNELENKVSRLEEENERLRKQKVGFLILFMLFCIAVADLVVLLFK
Disordered Region (DISPRO)
****************************RQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVE******************SLTSALSKKTVDEVWRDIQQSK***********ATLGEMTLEDFLVKAGVVAEASS******PVVG*DQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVT*******************************************************ESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLILFMLFCIAVADLVVLLFK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLMRGMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSxxxxxxxxxxxxxxxxxxxxxxxxxxxxKVGFLILFMLFCIAVADLVVLLFK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	315	2.2.26 [Sep-21-2011]
Q9LES3	297	ABSCISIC ACID-INSENSITIVE	yes	no	0.790	0.838	0.547	1e-64
Q9C5Q2	262	ABSCISIC ACID-INSENSITIVE	no	no	0.698	0.839	0.512	5e-52
Q9M7Q5	392	ABSCISIC ACID-INSENSITIVE	no	no	0.422	0.339	0.464	4e-27
Q8RYD6	331	ABSCISIC ACID-INSENSITIVE	no	no	0.780	0.743	0.392	2e-26
Q9SJN0	442	Protein ABSCISIC ACID-INS	no	no	0.638	0.454	0.356	2e-24
Q9M7Q2	431	ABSCISIC ACID-INSENSITIVE	no	no	0.368	0.269	0.460	3e-23
Q9FMM7	370	ABSCISIC ACID-INSENSITIVE	no	no	0.793	0.675	0.319	3e-21
Q9M7Q3	454	ABSCISIC ACID-INSENSITIVE	no	no	0.422	0.292	0.371	2e-20
Q9M7Q4	416	ABSCISIC ACID-INSENSITIVE	no	no	0.346	0.262	0.460	3e-20
Q6ZDF3	318	bZIP transcription factor	no	no	0.279	0.276	0.481	2e-15

>sp|Q9LES3|AI5L2_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1

 Score =  246 bits (628), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/287 (54%), Positives = 181/287 (63%), Gaps = 38/287 (13%)

Query: 20  KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTL--- 76
           +Q++ Q L RQ+S+YSLTLDEVQN LG  GK L SMNLDELLK+V + E     +     
Sbjct: 9   EQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQPSSMAVNG 68

Query: 77  --AEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGE-KKPRDRQATLGEMTLEDFL 133
             A Q  L RQ SL+L   LSKKTVDEVW+DIQQ+K+ G   + RD+Q TLGEMTLED L
Sbjct: 69  GAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSAHERRDKQPTLGEMTLEDLL 128

Query: 134 VKAGVVAEASSDKKIDGPVVGVD--------QNVVPHFPQQGPWMPYPHPQYQHSQQSMM 185
           +KAGVV E       DGPV G          QN+     Q GPW+ Y      H   SM 
Sbjct: 129 LKAGVVTETIPGSNHDGPVGGGSAGSGAGLGQNIT----QVGPWIQY------HQLPSM- 177

Query: 186 GVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKT 245
                    PQP   +   V D+    +Q  L    MG LSD Q  GRKR AS +++EKT
Sbjct: 178 ---------PQPQAFMPYPVSDMQAMVSQSSL----MGGLSDTQTPGRKRVASGEVVEKT 224

Query: 246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
           VERRQKRMIKNRESAARSRARKQAYT+ELE KVSRLEEENERLRKQK
Sbjct: 225 VERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQK 271

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5Q2|AI5L3_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1

 Score =  204 bits (520), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 139/271 (51%), Positives = 156/271 (57%), Gaps = 51/271 (18%)

Query: 25  QPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQR 84
           Q L RQNS+YSL L EVQ  LG  GKPL SMNLDELLK V     E           L R
Sbjct: 14  QSLTRQNSLYSLKLHEVQTHLGSSGKPLGSMNLDELLKTVLPPAEE----------GLVR 63

Query: 85  QASLSLTSALSKKTVDEVWRDIQQSKSSG--EKKPRDRQATLGEMTLEDFLVKAGVVAEA 142
           Q SL+L   LSKKTVDEVWRDIQQ K+          +Q TLGE+TLED L++AGVV E 
Sbjct: 64  QGSLTLPRDLSKKTVDEVWRDIQQDKNGNGTSTTTTHKQPTLGEITLEDLLLRAGVVTET 123

Query: 143 SSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPIPQPMNMVT 202
                       V Q  V +    G W+ Y H   Q  QQ     Y    P+ +  +MV 
Sbjct: 124 V-----------VPQENVVNIASNGQWVEYHH---QPQQQQGFMTY----PVCEMQDMVM 165

Query: 203 GAVMDVSFPENQVGLTSPSMGTLSD-PQLLGRKRGASEDMIEKTVERRQKRMIKNRESAA 261
                              MG LSD PQ  GRKR A E ++EKTVERRQKRMIKNRESAA
Sbjct: 166 -------------------MGGLSDTPQAPGRKRVAGE-IVEKTVERRQKRMIKNRESAA 205

Query: 262 RSRARKQAYTNELENKVSRLEEENERLRKQK 292
           RSRARKQAYT+ELE KVSRLEEENE+LR+ K
Sbjct: 206 RSRARKQAYTHELEIKVSRLEEENEKLRRLK 236

Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q5|AI5L4_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1

 Score =  122 bits (305), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 91/153 (59%), Gaps = 20/153 (13%)

Query: 9   MGSQAD----GSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           MG+  D    G    + ++ +PLARQ+S+YSLT DE+Q+ LG+ GK   SMN+DELLKN+
Sbjct: 1   MGTHIDINNLGGDTSRGNESKPLARQSSLYSLTFDELQSTLGEPGKDFGSMNMDELLKNI 60

Query: 65  WTAEVEMEGTTLAEQTS-------------LQRQASLSLTSALSKKTVDEVWRDIQQSKS 111
           WTAE      T     +             LQRQ SL+L   LS+KTVDEVW+ +   + 
Sbjct: 61  WTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKTVDEVWKYLNSKEG 120

Query: 112 SGEKKPRD---RQATLGEMTLEDFLVKAGVVAE 141
           S      D   RQ TLGEMTLEDFL++AGVV E
Sbjct: 121 SNGNTGTDALERQQTLGEMTLEDFLLRAGVVKE 153

Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RYD6|AI5L1_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1

 Score =  120 bits (300), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/285 (39%), Positives = 152/285 (53%), Gaps = 39/285 (13%)

Query: 22  SQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTA--EVEMEGTTLAEQ 79
           S+ +P+ RQNS+ SLTLDE+Q + G   K   +MN+DE L N+WT   E + EG      
Sbjct: 30  SEEEPVGRQNSILSLTLDEIQMKSG---KSFGAMNMDEFLANLWTTVEENDNEGGGAHND 86

Query: 80  ----TSLQRQASLSLTSALSKKTVDEVWRDIQQ-------SKSSGEKKPRD--RQATLGE 126
                 L RQ SLSL   L KKTVDEVW +IQ        S +SG+    +  RQ TLGE
Sbjct: 87  GEKPAVLPRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGE 146

Query: 127 MTLEDFLVKAGVVAEA-SSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMM 185
           +TLEDFLVKAGVV E   +  ++     G +       P+ G  +   H Q Q++     
Sbjct: 147 ITLEDFLVKAGVVQEPLKTTMRMSSSDFGYN-------PEFGVGL---HCQNQNNYGDNR 196

Query: 186 GVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKT 245
            VY   +P    +   + + M  +   NQ          L+       K+   +   E  
Sbjct: 197 SVYSENRPFYSVLGE-SSSCMTGNGRSNQY---------LTGLDAFRIKKRIIDGPPEIL 246

Query: 246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK 290
           +ERRQ+RMIKNRESAARSRAR+QAYT ELE +++ L EEN +L++
Sbjct: 247 MERRQRRMIKNRESAARSRARRQAYTVELELELNNLTEENTKLKE 291

Could participate in abscisic acid-regulated gene expression during seed development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJN0|ABI5_ARATH Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana GN=ABI5 PE=1 SV=1

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 133/278 (47%), Gaps = 77/278 (27%)

Query: 76  LAEQTSLQRQASLSLTSALSKKTVDEVWRDIQ--------------------QSKSSGEK 115
           +A ++SL RQ SL+L + L +KTVDEVW +I                     Q+ +    
Sbjct: 134 IANESSLPRQGSLTLPAPLCRKTVDEVWSEIHRGGGSGNGGDSNGRSSSSNGQNNAQNGG 193

Query: 116 KPRDRQATLGEMTLEDFLVKAGVVAE----------------------ASSDKKIDGPVV 153
           +   RQ T GEMTLEDFLVKAGVV E                      A++ +++ G   
Sbjct: 194 ETAARQPTFGEMTLEDFLVKAGVVREHPTNPKPNPNPNQNQNPSSVIPAAAQQQLYGVFQ 253

Query: 154 GVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQPI---------------PQPM 198
           G      P FP Q   +  P     +++++  G Y    P+                Q M
Sbjct: 254 GTGD---PSFPGQAMGVGDPS---GYAKRTGGGGYQQAPPVQAGVCYGGGVGFGAGGQQM 307

Query: 199 NMVTGAVMDVSFP-------ENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQK 251
            MV G +  VS         +N  G     MG L      GRKR   +  +EK VERRQ+
Sbjct: 308 GMV-GPLSPVSSDGLGHGQVDNIGGQYGVDMGGLR-----GRKR-VVDGPVEKVVERRQR 360

Query: 252 RMIKNRESAARSRARKQAYTNELENKVSRLEEENERLR 289
           RMIKNRESAARSRARKQAYT ELE ++++L+EEN +L+
Sbjct: 361 RMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLK 398

Participates in ABA-regulated gene expression during seed development and subsequent vegetative stage by acting as the major mediator of ABA repression of growth. Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 and Em6 genes promoters. Can also trans-activate its own promoter, suggesting that it is autoregulated. Plays a role in sugar-mediated senescence.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q2|AI5L7_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1

 Score =  109 bits (272), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 81/141 (57%), Gaps = 25/141 (17%)

Query: 26  PLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEM--------EGTTLA 77
           PLARQ+S+YSLT DE+QN LG  GK   SMN+DELLK++WTAE             T +A
Sbjct: 33  PLARQSSVYSLTFDELQNTLGGPGKDFGSMNMDELLKSIWTAEEAQAMAMTSAPAATAVA 92

Query: 78  E--------QTSLQRQASLSLTSALSKKTVDEVWRDI---------QQSKSSGEKKPRDR 120
           +          +LQRQ SL+L   +S+KTVDEVW+ +                   P  R
Sbjct: 93  QPGAGIPPPGGNLQRQGSLTLPRTISQKTVDEVWKCLITKDGNMEGSSGGGGESNVPPGR 152

Query: 121 QATLGEMTLEDFLVKAGVVAE 141
           Q TLGEMTLE+FL +AGVV E
Sbjct: 153 QQTLGEMTLEEFLFRAGVVRE 173

Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FMM7|AI5L8_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 8 OS=Arabidopsis thaliana GN=BZIP15 PE=2 SV=1

 Score =  102 bits (254), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 149/338 (44%), Gaps = 88/338 (26%)

Query: 27  LARQNSMYSLTLDEVQNQLG-DLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEQTSLQRQ 85
           L+RQ S+YS T+D+ Q  LG D G    SMN+DEL+K++ +AE   EG+        QRQ
Sbjct: 20  LSRQGSIYSWTVDQFQTSLGLDCG----SMNMDELVKHISSAEETQEGS--------QRQ 67

Query: 86  ASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDR------QATLGEMTLEDFLVKAGVV 139
            S +L   LSK+ V EVW+ I + K +              Q TLGE+TLE+F ++AG  
Sbjct: 68  GSTTLPPTLSKQNVGEVWKSITEEKHTNNNGGVTNITHLQGQQTLGEITLEEFFIRAGAR 127

Query: 140 AEASSDKKIDGPVVGVDQNVVPHFP---QQGP----------WMPYPHPQYQHSQ-QSMM 185
              ++   I      +  N  PH     Q  P           +P  H  Y H      M
Sbjct: 128 GGNTNGGSIHDSSSSISGN--PHTSLGVQIQPKAMVSDFMNNMVPRSHDSYLHQNVNGSM 185

Query: 186 GVYMPGQPIPQPMNMVTGAVM--DVSFPENQVGLTS-----------PSMGTLSD----- 227
             Y P Q I   M+M  G      + F    +G  +           PS+ T+       
Sbjct: 186 STYQPQQSI---MSMPNGYSYGKQIRFSNGSLGSGNQSLQDTKRSLVPSVATIPSEAITC 242

Query: 228 ------PQLLGRK----------------------RGA---SEDMIEKT-VERRQKRMIK 255
                 P L G++                      RG    SE   EK  V+++ +R IK
Sbjct: 243 SPVTPFPTLNGKQKINGESSLLSPSPYISNGSTSTRGGKINSEITAEKQFVDKKLRRKIK 302

Query: 256 NRESAARSRARKQAYTNELENKVSRLEEENERLRKQKV 293
           NRESAARSRARKQA T E+E ++  L+++ E L KQ V
Sbjct: 303 NRESAARSRARKQAQTMEVEVELENLKKDYEELLKQHV 340

Could participate in abscisic acid-regulated gene expression.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q3|AI5L6_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 6 OS=Arabidopsis thaliana GN=ABF3 PE=1 SV=1

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 85/183 (46%), Gaps = 50/183 (27%)

Query: 26  PLARQNSMYSLTLDEVQNQLGD-LGKPLSSMNLDELLKNVWTAE---------------- 68
           PL RQNS++SLT DE QN  G  +GK   SMN+DELLKN+WTAE                
Sbjct: 26  PLTRQNSVFSLTFDEFQNSWGGGIGKDFGSMNMDELLKNIWTAEESHSMMGNNTSYTNIS 85

Query: 69  ----------------------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDI 106
                                 V  E        SLQRQ SL+L   +S+K VD+VW+++
Sbjct: 86  NGNSGNTVINGGGNNIGGLAVGVGGESGGFFTGGSLQRQGSLTLPRTISQKRVDDVWKEL 145

Query: 107 QQSK-------SSGEKKPRDRQATLGEMTLEDFLVKAGVVAE----ASSDKKIDGPVVGV 155
            +         + G      RQ TLGEMTLE+FLV+AGVV E      S    +G   G 
Sbjct: 146 MKEDDIGNGVVNGGTSGIPQRQQTLGEMTLEEFLVRAGVVREEPQPVESVTNFNGGFYGF 205

Query: 156 DQN 158
             N
Sbjct: 206 GSN 208

Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M7Q4|AI5L5_ARATH ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana GN=ABF2 PE=1 SV=1

 Score = 99.4 bits (246), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 81/139 (58%), Gaps = 30/139 (21%)

Query: 27  LARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLA--------- 77
           L RQ S+YSLT DE Q+    +GK   SMN+DELLKN+W+AE   E   +A         
Sbjct: 21  LTRQGSIYSLTFDEFQS---SVGKDFGSMNMDELLKNIWSAE---ETQAMASGVVPVLGG 74

Query: 78  --EQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSG-------------EKKPRDRQA 122
             E   LQRQ SL+L   LS+KTVD+VW+D+ +  SSG              +    RQ 
Sbjct: 75  GQEGLQLQRQGSLTLPRTLSQKTVDQVWKDLSKVGSSGVGGSNLSQVAQAQSQSQSQRQQ 134

Query: 123 TLGEMTLEDFLVKAGVVAE 141
           TLGE+TLE+FLV+AGVV E
Sbjct: 135 TLGEVTLEEFLVRAGVVRE 153

Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZDF3|TRAB1_ORYSJ bZIP transcription factor TRAB1 OS=Oryza sativa subsp. japonica GN=TRAB1 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 18/106 (16%)

Query: 55  MNLDELLKNVWTAE-----VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQS 109
           MN+DELL+++WTAE             A +  LQRQ SL+L   LS KTVDEVWRD+++ 
Sbjct: 1   MNMDELLRSIWTAEESQAMASASAAAAAAEGGLQRQGSLTLPRTLSVKTVDEVWRDLERE 60

Query: 110 KSSG------------EKKPRDRQATLGEMTLEDFLVKAGVVAEAS 143
            S G            +++PR RQ TLGEMTLE+FLV+AGVV E +
Sbjct: 61  ASPGAAAADGGGGGGEQQQPR-RQPTLGEMTLEEFLVRAGVVRENT 105

Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	315
255542297	310	DNA binding protein, putative [Ricinus c	0.917	0.932	0.789	1e-128
118483091	322	unknown [Populus trichocarpa]	0.955	0.934	0.736	1e-122
224100543	317	predicted protein [Populus trichocarpa]	0.942	0.936	0.739	1e-121
302398623	322	BZIP domain class transcription factor [	0.911	0.891	0.760	1e-120
449446331	321	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.911	0.894	0.762	1e-114
356515347	316	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.898	0.895	0.714	1e-113
356526358	323	PREDICTED: transcription factor bZIP70 [	0.939	0.916	0.700	1e-111
59896064	322	bZIP transcription factor [Malus x domes	0.911	0.891	0.753	1e-111
359487036	305	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.866	0.895	0.765	1e-109
225463745	325	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-l	0.863	0.836	0.767	1e-108

>gi|255542297|ref|XP_002512212.1| DNA binding protein, putative [Ricinus communis] gi|223548756|gb|EEF50246.1| DNA binding protein, putative [Ricinus communis]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/295 (78%), Positives = 255/295 (86%), Gaps = 6/295 (2%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           G+Q MGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQ+QLGDLGKPLSSMNLDELLKNV
Sbjct: 2   GIQTMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQHQLGDLGKPLSSMNLDELLKNV 61

Query: 65  WTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPR 118
           WTAE      +E+EGT LA QT+LQRQASLSLTSALSKKTVDEVWRDIQ+ K++  KK R
Sbjct: 62  WTAEANHTIGMEVEGTQLANQTALQRQASLSLTSALSKKTVDEVWRDIQEGKNNEGKKSR 121

Query: 119 DRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQ 178
           DRQ TLGEMTLEDFLVKAGVVAEASS+KK D PVV V+ NV   FPQQ  W+ YPHPQYQ
Sbjct: 122 DRQPTLGEMTLEDFLVKAGVVAEASSEKKDDSPVVRVETNVGSQFPQQSQWIQYPHPQYQ 181

Query: 179 HSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGAS 238
           H QQSMMGVY+P Q +PQP++M  GAV+DVS+PENQ+ L +  MGTLSD Q   RKRG  
Sbjct: 182 HPQQSMMGVYLPAQSMPQPLHMGAGAVLDVSYPENQLSLPTSLMGTLSDVQTPARKRGTP 241

Query: 239 EDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKV 293
           EDM+EKTVERRQKRMIKNRESAARSRARKQAYTNELE+KVSRLE ENERLRK+KV
Sbjct: 242 EDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELEHKVSRLEAENERLRKRKV 296

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483091|gb|ABK93455.1| unknown [Populus trichocarpa]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/311 (73%), Positives = 251/311 (80%), Gaps = 10/311 (3%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           GMQ MGSQ DGSS+ KQSQFQPL RQNSMYSLTLD+VQNQLGDLGKPLSSMNLDELLKNV
Sbjct: 2   GMQTMGSQGDGSSHHKQSQFQPLVRQNSMYSLTLDKVQNQLGDLGKPLSSMNLDELLKNV 61

Query: 65  WTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPR 118
           WT E      +E+EG   A QT+LQ QAS+SLTSALSKKTVDEVW+DIQQSK  GE K R
Sbjct: 62  WTVEANRTMGLEVEGIPFANQTALQHQASISLTSALSKKTVDEVWKDIQQSKHDGEMKSR 121

Query: 119 DRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYP-HPQY 177
           +RQ TLGEMTLEDFLVKAGVVAEAS DKK  G VV VD +    F QQ  W+ YP HPQY
Sbjct: 122 ERQPTLGEMTLEDFLVKAGVVAEASVDKKDGGSVVTVDTHAAQQFLQQSQWVQYPPHPQY 181

Query: 178 QHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGA 237
            H QQSMMGVYMPGQP+PQP++M  G++MDVS+PENQV L  P MGTLSD Q   RKRG 
Sbjct: 182 HHPQQSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVTLPPPLMGTLSDTQTPARKRGV 241

Query: 238 SEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI 297
            EDMI KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK++    +
Sbjct: 242 PEDMIGKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRRE---L 298

Query: 298 LFMLFCIAVAD 308
             ML C+ + +
Sbjct: 299 ENMLPCVPLPE 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100543|ref|XP_002311917.1| predicted protein [Populus trichocarpa] gi|222851737|gb|EEE89284.1| predicted protein [Populus trichocarpa]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/307 (73%), Positives = 248/307 (80%), Gaps = 10/307 (3%)

Query: 9   MGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAE 68
           MGSQ DGSS+ KQSQFQPL RQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWT E
Sbjct: 1   MGSQGDGSSHHKQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVE 60

Query: 69  ------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQA 122
                 +E+EG   A QT+LQ QAS+SLTSALSKKTVDEVW+DIQQSK  GE K R+RQ 
Sbjct: 61  ANRTMGLEVEGIPFANQTALQHQASISLTSALSKKTVDEVWKDIQQSKHDGEMKSRERQP 120

Query: 123 TLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYP-HPQYQHSQ 181
           TLGEMTLEDFLVKAGVVAEAS DKK  G VV VD +    F QQ  W+ YP HPQY H Q
Sbjct: 121 TLGEMTLEDFLVKAGVVAEASVDKKDGGSVVTVDTHAAQQFLQQSQWVQYPPHPQYHHPQ 180

Query: 182 QSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDM 241
           QSMMGVYMPGQP+PQP++M  G++MDVS+PENQV L  P MGTLSD Q   RKRG  EDM
Sbjct: 181 QSMMGVYMPGQPMPQPLHMGAGSMMDVSYPENQVTLPPPLMGTLSDTQTPARKRGVPEDM 240

Query: 242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLILFML 301
           I KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK++    +  ML
Sbjct: 241 IGKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRRE---LENML 297

Query: 302 FCIAVAD 308
            C+ + +
Sbjct: 298 PCVPLPE 304

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398623|gb|ADL36606.1| BZIP domain class transcription factor [Malus x domestica]

 Score =  436 bits (1121), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/296 (76%), Positives = 242/296 (81%), Gaps = 9/296 (3%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           G+Q MGSQ     N KQ QFQPL RQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV
Sbjct: 2   GIQTMGSQGGADGNCKQPQFQPLGRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 61

Query: 65  WTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPR 118
           W+ E      +++EGTTL  Q  LQRQASLSLTSALSKKTVDEVWRDIQQSK   EKK +
Sbjct: 62  WSVEANQTMGIDIEGTTLVNQAQLQRQASLSLTSALSKKTVDEVWRDIQQSKDEEEKKSQ 121

Query: 119 DRQATLGEMTLEDFLVKAGVVAEA--SSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQ 176
           +RQ TLGEMTLEDFLVKAGVVAEA  SSDK+  GP+VGVD NV   FPQ G WM Y  PQ
Sbjct: 122 ERQRTLGEMTLEDFLVKAGVVAEAEASSDKQCAGPLVGVDANVAAQFPQ-GQWMQYSQPQ 180

Query: 177 YQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRG 236
           YQH QQSMMGVYMP QPIP PM++  GA+M+V +P+NQV L SP MG LSD    GRKRG
Sbjct: 181 YQHPQQSMMGVYMPSQPIPPPMHVGAGAMMEVPYPDNQVPLPSPLMGALSDTPTPGRKRG 240

Query: 237 ASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
             ED++EKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK
Sbjct: 241 NPEDIVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 296

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446331|ref|XP_004140925.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus] gi|449529052|ref|XP_004171515.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Cucumis sativus]

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/295 (76%), Positives = 241/295 (81%), Gaps = 8/295 (2%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           G+Q MGSQA G  NGKQSQFQPL RQNS+YSLTLDEVQNQLGDLGKPL SMNLDELLKNV
Sbjct: 2   GIQTMGSQAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKNV 61

Query: 65  WTAEVEM-------EGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKP 117
           WTAE          +   LA QTSLQRQASLSL  ALSKKTVDEVWRDIQQSK S EKK 
Sbjct: 62  WTAEANQTVGKDNEDNNILANQTSLQRQASLSLNGALSKKTVDEVWRDIQQSKDSEEKKS 121

Query: 118 RDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQY 177
           R+RQ TLGEMTLEDFLVKAGVVAE SS+KK  GPVV +D N+ P F QQ  WM YP PQY
Sbjct: 122 RERQPTLGEMTLEDFLVKAGVVAETSSNKKGAGPVVEIDANITPQF-QQTQWMQYPQPQY 180

Query: 178 QHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGA 237
           Q  Q +MMGVYM GQPIPQP+++  GAVMDV + +NQ+ L +P MG LSD Q  GRKRGA
Sbjct: 181 QSQQAAMMGVYMSGQPIPQPLHVGGGAVMDVPYVDNQLTLPTPLMGALSDTQASGRKRGA 240

Query: 238 SEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
            EDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK+K
Sbjct: 241 PEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRK 295

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515347|ref|XP_003526362.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like [Glycine max]

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/291 (71%), Positives = 236/291 (81%), Gaps = 8/291 (2%)

Query: 9   MGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAE 68
           MGSQ  G ++GK SQ QPL  QNSMYSLTLDEVQN LGDLGKPLSSMNLDELLKNVWT E
Sbjct: 1   MGSQCGGDNSGKHSQLQPLVPQNSMYSLTLDEVQNHLGDLGKPLSSMNLDELLKNVWTVE 60

Query: 69  ------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPRDRQA 122
                 V++EGT L  Q +LQRQASLSLTSALS KTVDEVWRDIQQSK + +KK ++RQ+
Sbjct: 61  ANQSTGVDIEGTALTSQAALQRQASLSLTSALSGKTVDEVWRDIQQSKDNKDKKSQERQS 120

Query: 123 TLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNVV-PHFPQQGPWMPYPHPQYQHSQ 181
           TLGEMTLEDFLVKAG+VAEA S++K  G  VGVD NVV P FPQ GPW+ Y  PQYQH Q
Sbjct: 121 TLGEMTLEDFLVKAGIVAEA-SNRKNTGATVGVDSNVVAPQFPQHGPWIQYAQPQYQHPQ 179

Query: 182 QSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDM 241
           Q +MG+Y+PGQ   QP++M  G   DV + + QV L+SP MGTLSD +  GRKRG SEDM
Sbjct: 180 QGLMGIYIPGQNKAQPLHMGAGVATDVLYADGQVALSSPVMGTLSDTRRPGRKRGTSEDM 239

Query: 242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
           +EKTVERRQKRMIKNRESAARSRARKQAYT ELE+KVSRLEEENE+LR+Q+
Sbjct: 240 VEKTVERRQKRMIKNRESAARSRARKQAYTTELEHKVSRLEEENEKLRRQQ 290

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526358|ref|XP_003531785.1| PREDICTED: transcription factor bZIP70 [Glycine max]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/307 (70%), Positives = 239/307 (77%), Gaps = 11/307 (3%)

Query: 5   GMQMMGSQADGS-SNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKN 63
           G Q MG+   G  SNGKQS  QPL RQNSMYSLTLDEVQNQLGDLGKPL+SMN+DELLKN
Sbjct: 2   GTQTMGTHGGGGDSNGKQSPLQPLVRQNSMYSLTLDEVQNQLGDLGKPLTSMNIDELLKN 61

Query: 64  VWTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKP 117
           VWTAE      ++ EGT  A Q SLQRQASLSLT ALSKKTVDEVWRDIQQ+K  GEKK 
Sbjct: 62  VWTAEASQTIGMDNEGTAQASQASLQRQASLSLTGALSKKTVDEVWRDIQQNKIVGEKKF 121

Query: 118 RDRQATLGEMTLEDFLVKAGVVAEASSDKKIDGPVVGVDQNV-VPHFPQQGPWMPYPHPQ 176
           +DR  TLGEMTLEDFLVKAGVVA ASS++     + GVD NV VP FP Q  W+ YP  Q
Sbjct: 122 QDRHPTLGEMTLEDFLVKAGVVAGASSNRTNTSTIAGVDSNVAVPQFPSQAQWIQYPQAQ 181

Query: 177 YQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRG 236
           YQH  QS+MG+YMP Q + QP++M  GA +DVSF +NQ+ + S  MGT+SD Q  GRK+ 
Sbjct: 182 YQHPPQSLMGMYMPSQGMVQPLHMGAGASLDVSFADNQMAMPSSLMGTMSDTQTPGRKKS 241

Query: 237 ASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFL 296
            SEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK+K    
Sbjct: 242 TSEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKE--- 298

Query: 297 ILFMLFC 303
           +  ML C
Sbjct: 299 LEQMLSC 305

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|59896064|gb|AAX11392.1| bZIP transcription factor [Malus x domestica]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/296 (75%), Positives = 243/296 (82%), Gaps = 9/296 (3%)

Query: 5   GMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 64
           G+  MGSQ     N KQSQFQPLARQNS+YSLTLDEVQNQLGDLGKPLSSMNLDELLKNV
Sbjct: 2   GIPTMGSQGGADGNCKQSQFQPLARQNSIYSLTLDEVQNQLGDLGKPLSSMNLDELLKNV 61

Query: 65  WTAE------VEMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGEKKPR 118
           W+AE      +++EG TL  Q  LQRQASLSLTSALSKKTVDEVW+DIQQSK   EKK +
Sbjct: 62  WSAEANQIMGIDIEGNTLVNQAQLQRQASLSLTSALSKKTVDEVWKDIQQSKDEEEKKSQ 121

Query: 119 DRQATLGEMTLEDFLVKAGVVAEA--SSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQ 176
           +RQ TLGEMTLEDFLVKAGVVAEA  SSDKK   P+VGVD NV    PQ G WM YP PQ
Sbjct: 122 ERQRTLGEMTLEDFLVKAGVVAEAEASSDKKYADPLVGVDANVAAQLPQ-GQWMQYPQPQ 180

Query: 177 YQHSQQSMMGVYMPGQPIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRG 236
           YQH QQSMMGVYMP QP+  PM++  GA+M+V +P+NQV + SP MGTLSD Q  GRKRG
Sbjct: 181 YQHPQQSMMGVYMPSQPLQPPMHVGAGAMMEVPYPDNQVAVPSPLMGTLSDTQTPGRKRG 240

Query: 237 ASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
             ED++EKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK
Sbjct: 241 NPEDIVEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 296

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487036|ref|XP_003633507.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like isoform 2 [Vitis vinifera]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/281 (76%), Positives = 238/281 (84%), Gaps = 8/281 (2%)

Query: 20  KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAE------VEMEG 73
           KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPL+SMNLDELLKNVWT E      ++ EG
Sbjct: 21  KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLTSMNLDELLKNVWTVEANNSVGMDAEG 80

Query: 74  TTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQ-QSKSSGEKKPRDRQATLGEMTLEDF 132
             L+ Q++LQR+ SLSLT ALSKKTVDEVWRDIQ   K+S EKK R+RQ TLGEMTLEDF
Sbjct: 81  AGLSNQSALQREPSLSLTGALSKKTVDEVWRDIQGHGKNSEEKKSRERQPTLGEMTLEDF 140

Query: 133 LVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQ 192
           LVKAGVVAE S DKKI G V+GVD NV P FPQQG WM YP PQ+ H QQ+M+GVYMPGQ
Sbjct: 141 LVKAGVVAEPS-DKKIAGTVIGVDPNVGPQFPQQGQWMQYPQPQFPHPQQNMIGVYMPGQ 199

Query: 193 PIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKR 252
           P+PQP+ M   +VMDV++P+NQV L+SP MG LSD Q  GRKR + EDMIEKTVERRQKR
Sbjct: 200 PMPQPLPMGPSSVMDVTYPDNQVALSSPLMGALSDTQAPGRKRVSQEDMIEKTVERRQKR 259

Query: 253 MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKV 293
           MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK+K+
Sbjct: 260 MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKI 300

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463745|ref|XP_002265747.1| PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2-like isoform 1 [Vitis vinifera]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/280 (76%), Positives = 237/280 (84%), Gaps = 8/280 (2%)

Query: 20  KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAE------VEMEG 73
           KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPL+SMNLDELLKNVWT E      ++ EG
Sbjct: 21  KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLTSMNLDELLKNVWTVEANNSVGMDAEG 80

Query: 74  TTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQ-QSKSSGEKKPRDRQATLGEMTLEDF 132
             L+ Q++LQR+ SLSLT ALSKKTVDEVWRDIQ   K+S EKK R+RQ TLGEMTLEDF
Sbjct: 81  AGLSNQSALQREPSLSLTGALSKKTVDEVWRDIQGHGKNSEEKKSRERQPTLGEMTLEDF 140

Query: 133 LVKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQQSMMGVYMPGQ 192
           LVKAGVVAE S DKKI G V+GVD NV P FPQQG WM YP PQ+ H QQ+M+GVYMPGQ
Sbjct: 141 LVKAGVVAEPS-DKKIAGTVIGVDPNVGPQFPQQGQWMQYPQPQFPHPQQNMIGVYMPGQ 199

Query: 193 PIPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKR 252
           P+PQP+ M   +VMDV++P+NQV L+SP MG LSD Q  GRKR + EDMIEKTVERRQKR
Sbjct: 200 PMPQPLPMGPSSVMDVTYPDNQVALSSPLMGALSDTQAPGRKRVSQEDMIEKTVERRQKR 259

Query: 253 MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
           MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK+K
Sbjct: 260 MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRK 299

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	315
TAIR|locus:2103665	297	AREB3 "ABA-responsive element	0.815	0.865	0.487	4e-51
TAIR|locus:2063275	262	EEL "AT2G41070" [Arabidopsis t	0.222	0.267	0.805	7.6e-44
UNIPROTKB|Q8RZ35	388	P0489B03.11 "Putative ABA resp	0.587	0.476	0.409	2.8e-38
TAIR|locus:2118969	454	ABF3 "AT4G34000" [Arabidopsis	0.307	0.213	0.495	4.1e-38
TAIR|locus:2049425	442	ABI5 "ABA INSENSITIVE 5" [Arab	0.187	0.133	0.666	7.4e-33
TAIR|locus:2076018	331	DPBF2 "AT3G44460" [Arabidopsis	0.371	0.353	0.407	1.7e-26
UNIPROTKB|Q6ZDF3	318	TRAB1 "bZIP transcription fact	0.285	0.283	0.494	1.2e-25
TAIR|locus:2172507	315	AT5G44080 [Arabidopsis thalian	0.190	0.190	0.55	2.6e-16
TAIR|locus:2159986	370	AT5G42910 "AT5G42910" [Arabido	0.314	0.267	0.347	2.6e-16
TAIR|locus:2024224	270	GBF4 "G-box binding factor 4"	0.184	0.214	0.610	5e-15

TAIR|locus:2103665 AREB3 "ABA-responsive element binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 136/279 (48%), Positives = 158/279 (56%)

Query:    20 KQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEX 79
             +Q++ Q L RQ+S+YSLTLDEVQN LG  GK L SMNLDELLK+V + E     +     
Sbjct:     9 EQAKSQSLNRQSSLYSLTLDEVQNHLGSSGKALGSMNLDELLKSVCSVEANQPSSMAVNG 68

Query:    80 XXXXXXXXXXXXXXX-----XXXXVDEVWRDIQQSKSSGEK-KPRDRQATLGEMTLEDFL 133
                                     VDEVW+DIQQ+K+ G   + RD+Q TLGEMTLED L
Sbjct:    69 GAAAQEGLSRQGSLTLPRDLSKKTVDEVWKDIQQNKNGGSAHERRDKQPTLGEMTLEDLL 128

Query:   134 VKAGVVAEASSDKKIDGPVVGVDQNVVPHFPQQGPWXXXXXXXXXXXXXXXXGVYMPGQP 193
             +KAGVV E       DGPV G            G                    Y     
Sbjct:   129 LKAGVVTETIPGSNHDGPVGG------------GSAGSGAGLGQNITQVGPWIQYHQLPS 176

Query:   194 IPQPMNMVTGAVMDVSFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRM 253
             +PQP   +   V D+    +Q  L    MG LSD Q  GRKR AS +++EKTVERRQKRM
Sbjct:   177 MPQPQAFMPYPVSDMQAMVSQSSL----MGGLSDTQTPGRKRVASGEVVEKTVERRQKRM 232

Query:   254 IKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
             IKNRESAARSRARKQAYT+ELE KVSRLEEENERLRKQK
Sbjct:   233 IKNRESAARSRARKQAYTHELEIKVSRLEEENERLRKQK 271

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2063275 EEL "AT2G41070" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
 Identities = 58/72 (80%), Positives = 63/72 (87%)

Query:   222 MGTLSD-PQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSR 280
             MG LSD PQ  GRKR A E ++EKTVERRQKRMIKNRESAARSRARKQAYT+ELE KVSR
Sbjct:   166 MGGLSDTPQAPGRKRVAGE-IVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSR 224

Query:   281 LEEENERLRKQK 292
             LEEENE+LR+ K
Sbjct:   225 LEEENEKLRRLK 236

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

UNIPROTKB|Q8RZ35 P0489B03.11 "Putative ABA response element binding factor" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 273 (101.2 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
 Identities = 86/210 (40%), Positives = 112/210 (53%)

Query:   106 IQQSKSSGEKKPRDRQATLGEMTLEDFLVKAGVVA------EASSDKKIDGPVVGVDQNV 159
             +Q    SG     DRQ TLGEMTLEDFLVKAGVV        A     ++GPV  + Q  
Sbjct:   151 LQPHAGSGGVAANDRQVTLGEMTLEDFLVKAGVVRGSFTGQAAMGSGMVNGPVNPMQQG- 209

Query:   160 VPHFPQQGPWXXXXXXXXXXXXXXXXGVYMPG----QPIPQPMNMVTGAVMDVSFPENQV 215
                  Q GP                 G+  PG      I  P     GA++ VS P +  
Sbjct:   210 -----QGGPMMFPVGPVNAMYPVMGDGMGYPGGYNGMAIVPPPPPAQGAMVVVS-PGSSD 263

Query:   216 GLTSPS----MGTLSDPQLL--G-RKRGASED-MIEKTVERRQKRMIKNRESAARSRARK 267
             G+++ +    M  + +  ++  G RKR   ED   EKTVERRQ+RMIKNRESAARSRARK
Sbjct:   264 GMSAMTHADMMNCIGNGMMIENGTRKRPHREDGCAEKTVERRQRRMIKNRESAARSRARK 323

Query:   268 QAYTNELENKVSRLEEENERLRKQKVGFLI 297
             QAYT ELE +++ L++EN RL++ +   L+
Sbjct:   324 QAYTVELEAELNYLKQENARLKEAEKTVLL 353

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009409 "response to cold" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

TAIR|locus:2118969 ABF3 "AT4G34000" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 4.1e-38, Sum P(3) = 4.1e-38
 Identities = 51/103 (49%), Positives = 69/103 (66%)

Query:   196 QPMNMVTGAVMDVSFPENQVG--LTSPSM--GTLSD-PQLLGRKRGASEDMIEKTVERRQ 250
             Q ++  TG  +    P +Q+   LT  S    +LS  P + GR R     ++EK +ERRQ
Sbjct:   318 QAVDFKTGVTVAAVSPGSQMSPDLTPKSALDASLSPVPYMFGRVRKTGA-VLEKVIERRQ 376

Query:   251 KRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKV 293
             KRMIKNRESAARSRARKQAYT ELE ++++L+E NE L+K++V
Sbjct:   377 KRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQV 419

GO:0003677 "DNA binding" evidence=ISS;IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0008219 "cell death" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

TAIR|locus:2049425 ABI5 "ABA INSENSITIVE 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 7.4e-33, Sum P(4) = 7.4e-33
 Identities = 40/60 (66%), Positives = 50/60 (83%)

Query:   230 LLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLR 289
             L GRKR   +  +EK VERRQ+RMIKNRESAARSRARKQAYT ELE ++++L+EEN +L+
Sbjct:   340 LRGRKR-VVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLK 398

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048316 "seed development" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA;IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0010200 "response to chitin" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IEP;RCA

GO:0010187 "negative regulation of seed germination" evidence=IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2076018 DPBF2 "AT3G44460" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
 Identities = 55/135 (40%), Positives = 70/135 (51%)

Query:    22 SQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTA--EVEMEGTTLAEX 79
             S+ +P+ RQNS+ SLTLDE+Q + G   K   +MN+DE L N+WT   E + EG      
Sbjct:    30 SEEEPVGRQNSILSLTLDEIQMKSG---KSFGAMNMDEFLANLWTTVEENDNEGGGAHND 86

Query:    80 XXXXXXXXXXXXXXXXX----XXVDEVWRDIQQ-------SKSSGEKKPRD--RQATLGE 126
                                    VDEVW +IQ        S +SG+    +  RQ TLGE
Sbjct:    87 GEKPAVLPRQGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGE 146

Query:   127 MTLEDFLVKAGVVAE 141
             +TLEDFLVKAGVV E
Sbjct:   147 ITLEDFLVKAGVVQE 161

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0033613 "activating transcription factor binding" evidence=IPI

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IDA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

UNIPROTKB|Q6ZDF3 TRAB1 "bZIP transcription factor TRAB1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 187 (70.9 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
 Identities = 49/99 (49%), Positives = 66/99 (66%)

Query:   197 PMNMVTGAVMDVSFPENQVGLTSPSMGTLSDP---QLLGRKRGASEDMIEKTVERRQKRM 253
             P++   G  MD S  +    L+SP M  +  P    + GR+ G +   +EK VERRQ+RM
Sbjct:   184 PVDTSVGQ-MD-SAGKGDGDLSSP-MAPVPYPFEGVIRGRRSGGN---VEKVVERRQRRM 237

Query:   254 IKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQK 292
             IKNRESAARSRARKQAYT ELE +V +L+E+N  L+K++
Sbjct:   238 IKNRESAARSRARKQAYTMELEAEVQKLKEQNMELQKKQ 276

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2172507 AT5G44080 [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
 Identities = 33/60 (55%), Positives = 43/60 (71%)

Query:   232 GRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
             G++     + ++K   +RQ+RMIKNRESAARSR RKQAY  ELE   ++LEEENE L K+
Sbjct:   217 GKRARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELEALAAKLEEENELLSKE 276

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2159986 AT5G42910 "AT5G42910" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
 Identities = 41/118 (34%), Positives = 58/118 (49%)

Query:    27 LARQNSMYSLTLDEVQNQLG-DLGKPLSSMNLDELLKNVWTAEVEMEGTTLAEXXXXXXX 85
             L+RQ S+YS T+D+ Q  LG D G    SMN+DEL+K++ +AE   EG+           
Sbjct:    20 LSRQGSIYSWTVDQFQTSLGLDCG----SMNMDELVKHISSAEETQEGSQ--------RQ 67

Query:    86 XXXXXXXXXXXXXVDEVWRDIQQSKSSGEK------KPRDRQATLGEMTLEDFLVKAG 137
                          V EVW+ I + K +              Q TLGE+TLE+F ++AG
Sbjct:    68 GSTTLPPTLSKQNVGEVWKSITEEKHTNNNGGVTNITHLQGQQTLGEITLEEFFIRAG 125

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2024224 GBF4 "G-box binding factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
 Identities = 36/59 (61%), Positives = 44/59 (74%)

Query:   234 KRG-ASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
             KRG    + ++K   +RQKRMIKNRESAARSR RKQAY  ELE   ++LEEENE+L K+
Sbjct:   174 KRGRVMMEAMDKAAAQRQKRMIKNRESAARSRERKQAYQVELETLAAKLEEENEQLLKE 232

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LES3	AI5L2_ARATH	No assigned EC number	0.5470	0.7904	0.8383	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	315
smart00338	65	smart00338, BRLZ, basic region leucin zipper	3e-16
pfam00170	64	pfam00170, bZIP_1, bZIP transcription factor	2e-12
pfam07716	54	pfam07716, bZIP_2, Basic region leucine zipper	5e-11
cd12193	54	cd12193, B_zip1, basic leucine zipper DNA-binding	2e-08

>gnl|CDD|197664 smart00338, BRLZ, basic region leucin zipper

 Score = 71.4 bits (176), Expect = 3e-16
 Identities = 26/48 (54%), Positives = 36/48 (75%)

Query: 244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           +  E+R++R  +NRE+A RSR RK+A   ELE KV +LE ENERL+K+
Sbjct: 1   EEDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKE 48

Length = 65

>gnl|CDD|201054 pfam00170, bZIP_1, bZIP transcription factor

 Score = 61.2 bits (149), Expect = 2e-12
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK 290
           +R++R  KNRE+A RSR RK+AY  ELE KV  LE EN+ LR 
Sbjct: 5   KRERRRQKNREAARRSRLRKKAYIEELEEKVKELEAENKTLRS 47

The Pfam entry includes the basic region and the leucine zipper region. Length = 64

>gnl|CDD|203738 pfam07716, bZIP_2, Basic region leucine zipper

 Score = 56.9 bits (138), Expect = 5e-11
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           K  E R +R  +N E+A RSR +K+    ELE +V  LEEEN +LR++
Sbjct: 1   KDDEYRDRRR-RNNEAARRSREKKKQREEELEERVKELEEENAQLRQK 47

Length = 54

>gnl|CDD|213400 cd12193, B_zip1, basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins

 Score = 49.2 bits (118), Expect = 2e-08
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 7/51 (13%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKV-------SRLEEENERLRKQ 291
            R ++  +NRE+A RSRARK     +LE+KV       S LE+E +RL+K 
Sbjct: 2   PRARKRARNREAARRSRARKMERMKQLEDKVEELTSENSDLEDEVDRLKKA 52

Basic leucine zipper (bZIP) transcription factors act in networks of homo- and hetero-dimers in the regulation in a diverse set of cellular pathways. Classical leucine zippers have alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization creates a pair of basic regions that bind DNA and undergo conformational change. GCN4 was identified in Saccharomyces cerevisiae from mutations in a deficiency in activation with the general amino acid control pathway. GCN4 encodes a trans-activator of amino acid biosynthetic genes containing 2 acidic activation domains and a C-terminal bZIP domain, comprised of a basic alpha-helical DNA-binding region and a coiled-coil dimerization region. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	315
KOG3584	348	consensus cAMP response element binding protein an	99.44
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	99.22
smart00338	65	BRLZ basic region leucin zipper.	99.19
PF00170	64	bZIP_1: bZIP transcription factor cAMP response el	99.11
KOG4005	292	consensus Transcription factor XBP-1 [Transcriptio	99.1
PF07716	54	bZIP_2: Basic region leucine zipper; InterPro: IPR	99.02
KOG0709	472	consensus CREB/ATF family transcription factor [Tr	98.86
PF03131	92	bZIP_Maf: bZIP Maf transcription factor; InterPro:	97.9
KOG0837	279	consensus Transcriptional activator of the JUN fam	97.64
KOG3119	269	consensus Basic region leucine zipper transcriptio	96.99
KOG4571	294	consensus Activating transcription factor 4 [Trans	96.75
KOG3863	604	consensus bZIP transcription factor NRF1 [Transcri	95.89
KOG4196	135	consensus bZIP transcription factor MafK [Transcri	95.78
KOG1414	395	consensus Transcriptional activator FOSB/c-Fos and	93.98
KOG1414	395	consensus Transcriptional activator FOSB/c-Fos and	91.04
KOG3119	269	consensus Basic region leucine zipper transcriptio	87.31
KOG4343	655	consensus bZIP transcription factor ATF6 [Transcri	81.03
PF01166	59	TSC22: TSC-22/dip/bun family; InterPro: IPR000580	80.3

>KOG3584 consensus cAMP response element binding protein and related transcription factors [Transcription]

Probab=99.44  E-value=1.3e-13  Score=131.22  Aligned_cols=64  Identities=34%  Similarity=0.526  Sum_probs=58.0

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 021244          241 MIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLILFMLFCIAVA  307 (315)
Q Consensus       241 ~~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~l~~~~~~~~~  307 (315)
                      ..|+...||+-|++||||+|++||+|||+|+++||++|+.||.+|+.|.+|+   +.|+..||++.-
T Consensus       284 ~aee~trKRevRLmKNREAARECRRKKKEYVKCLENRVAVLENQNKaLIEEL---KtLKeLYc~k~~  347 (348)
T KOG3584|consen  284 GAEEATRKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKALIEEL---KTLKELYCHKSK  347 (348)
T ss_pred             cchhhhhHHHHHHHhhHHHHHHHHHhHhHHHHHHHhHHHHHhcccHHHHHHH---HHHHHHhhcccC
Confidence            3567889999999999999999999999999999999999999999999888   477788998753

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=99.22  E-value=2.1e-11  Score=123.67  Aligned_cols=55  Identities=44%  Similarity=0.597  Sum_probs=50.2

Q ss_pred             hhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021244          241 MIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGF  295 (315)
Q Consensus       241 ~~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~  295 (315)
                      .+|.++.||+.|||||||||+.||+|||+|+..||.++..|..||+.|++|+.-|
T Consensus       274 ~~d~kv~krqQRmIKNResA~~SRkKKKEy~~~Le~rLq~ll~Ene~Lk~ENatL  328 (655)
T KOG4343|consen  274 GSDIKVLKRQQRMIKNRESACQSRKKKKEYMLGLEARLQALLSENEQLKKENATL  328 (655)
T ss_pred             ccCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence            4678899999999999999999999999999999999999999999988887644

>smart00338 BRLZ basic region leucin zipper

Probab=99.19  E-value=6.5e-11  Score=89.17  Aligned_cols=52  Identities=50%  Similarity=0.646  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021244          245 TVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFL  296 (315)
Q Consensus       245 ~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~  296 (315)
                      .++|+.+|+++||+||++||.||++|+.+||.+|..|+.+|..|..+++.+.
T Consensus         2 ~~~k~~rR~~rNR~aA~~~R~rKk~~~~~Le~~~~~L~~en~~L~~~~~~l~   53 (65)
T smart00338        2 EDEKRRRRRERNREAARRSRERKKAEIEELERKVEQLEAENERLKKEIERLR   53 (65)
T ss_pred             ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999999988664

>PF00170 bZIP_1: bZIP transcription factor cAMP response element binding (CREB) protein signature fos transforming protein signature jun transcription factor signature; InterPro: IPR011616 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotic are proteins that contain a basic region mediating sequence-specific DNA-binding followed by a leucine zipper region (see IPR002158 from INTERPRO) required for dimerization

Probab=99.11  E-value=3.5e-10  Score=85.08  Aligned_cols=53  Identities=45%  Similarity=0.644  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          245 TVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       245 ~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      +..++.+|+++||+||++||.||++|+.+||.+|..|+.+|..|+.++..+..
T Consensus         2 ~~~k~~~rr~rNR~AAr~~R~RKk~~~~~Le~~~~~L~~en~~L~~~~~~L~~   54 (64)
T PF00170_consen    2 KEDKRERRRERNREAARRSRQRKKQYIEELEEKVEELESENEELKKELEQLKK   54 (64)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999999999986643

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2H7H_B 2OQQ_B 1S9K_E 1JNM_A 1JUN_A 1FOS_H 1A02_J 1T2K_C 1CI6_A 1DH3_C ....

>KOG4005 consensus Transcription factor XBP-1 [Transcription]

Probab=99.10  E-value=1.3e-10  Score=108.34  Aligned_cols=69  Identities=33%  Similarity=0.393  Sum_probs=63.0

Q ss_pred             ccCCccCCChhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 021244          230 LLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLILFM  300 (315)
Q Consensus       230 ~~~rkr~~~~~~~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~l~~  300 (315)
                      -+.|||.+. +|+ ..+||-+||++|||.+|+-+|.|||+++.++|.++..|++||+.|+.+++.|+..+.
T Consensus        53 ~~~rKr~RL-~HL-S~EEK~~RrKLKNRVAAQtaRDrKKaRm~eme~~i~dL~een~~L~~en~~Lr~~n~  121 (292)
T KOG4005|consen   53 QPKRKRRRL-DHL-SWEEKVQRRKLKNRVAAQTARDRKKARMEEMEYEIKDLTEENEILQNENDSLRAINE  121 (292)
T ss_pred             chHHHHHhh-ccc-CHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            357999988 888 689999999999999999999999999999999999999999999999998875443

>PF07716 bZIP_2: Basic region leucine zipper; InterPro: IPR011700 The basic-leucine zipper (bZIP) transcription factors [, ] of eukaryotes are proteins that contain a basic region mediating sequence-specific DNA-binding, followed by a leucine zipper region (see IPR002158 from INTERPRO), which is required for dimerization

Probab=99.02  E-value=1.3e-09  Score=79.72  Aligned_cols=50  Identities=48%  Similarity=0.683  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021244          246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFL  296 (315)
Q Consensus       246 ~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~  296 (315)
                      ++++.+|. +||+||++||.|||+|+.+||.+|..|+.+|..|..+++.|.
T Consensus         3 ~~~~~rR~-rNr~AA~r~R~rkk~~~~~le~~~~~L~~en~~L~~~i~~L~   52 (54)
T PF07716_consen    3 EEKRERRE-RNREAARRSRQRKKQREEELEQEVQELEEENEQLRQEIAQLE   52 (54)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            56777787 999999999999999999999999999999999999987654

; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0046983 protein dimerization activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1NWQ_A 1H89_B 1H88_A 1GTW_B 2E43_A 1IO4_A 1GU4_B 2E42_A 1H8A_B 1GU5_B ....

>KOG0709 consensus CREB/ATF family transcription factor [Transcription]

Probab=98.86  E-value=2.3e-09  Score=107.70  Aligned_cols=54  Identities=35%  Similarity=0.569  Sum_probs=50.2

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021244          242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGF  295 (315)
Q Consensus       242 ~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~  295 (315)
                      .|+...||.||+|||.+||+.||+|||+|++.||.+|....+||++|+++++.+
T Consensus       245 aEEriLKrvRRKIrNK~SAQESRrkKkeYid~LE~rv~~~taeNqeL~kkV~~L  298 (472)
T KOG0709|consen  245 AEERILKRVRRKIRNKRSAQESRRKKKEYIDGLESRVSAFTAENQELQKKVEEL  298 (472)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHhHhhHHHHHhhhhhhcccCcHHHHHHHHHH
Confidence            577889999999999999999999999999999999999999999999988755

>PF03131 bZIP_Maf: bZIP Maf transcription factor; InterPro: IPR004826 There are several different types of Maf transcription factors with different roles in the cell

Probab=97.90  E-value=9.4e-07  Score=71.21  Aligned_cols=52  Identities=29%  Similarity=0.420  Sum_probs=44.0

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021244          244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGF  295 (315)
Q Consensus       244 ~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~  295 (315)
                      ....|..||.+|||.+|++||.||..++.+||.++..|+.+...|.+++..+
T Consensus        26 ~~~lK~~RRr~KNR~~A~~cR~rk~~~~~~Le~e~~~l~~~~~~L~~e~~~l   77 (92)
T PF03131_consen   26 IAELKQRRRRLKNRGYAQNCRKRKLDQIEELEEEIEQLRQEIEQLQQELSEL   77 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999988877777776665443

MafG and MafH are small Mafs which lack a putative transactivation domain. They behave as transcriptional repressors when they dimerize among themselves. However they also serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Maf transcription factors contain a conserved basic region leucine zipper (bZIP) domain, which mediates their dimerization and DNA binding property. Neural retina-specific leucine zipper proteins also belong to this family. Together with the basic region, the Maf extended homology region (EHR), conserved only within the Maf family, defines the DNA binding specific to Mafs. This structure enables Mafs to make a broader area of contact with DNA and to recognise longer DNA sequences. In particular, the two residues at the beginning of helix H2 are positioned to recognise the flanking region []. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF2-E2 transcription factor. In mouse, Maf1 may play an early role in axial patterning. Defects in these proteins are a cause of autosomal dominant retinitis pigmentosa. ; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 2KZ5_A 3A5T_A 1K1V_A 1SKN_P 2WT7_B 2WTY_B.

>KOG0837 consensus Transcriptional activator of the JUN family [Transcription]

Probab=97.64  E-value=0.00017  Score=68.64  Aligned_cols=66  Identities=26%  Similarity=0.292  Sum_probs=49.3

Q ss_pred             cCCccCCChhhhhhHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021244          231 LGRKRGASEDMIEKTVERR-QKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFL  296 (315)
Q Consensus       231 ~~rkr~~~~~~~e~~~eKr-~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~  296 (315)
                      ++++-..+.-.+|..+..| .|..++||++|.+||+||-+++..||.+|..|+.+|..|-.++..++
T Consensus       188 ~~~~~pispid~e~qe~~kleRkrlrnreaa~Kcr~rkLdrisrLEdkv~~lk~~n~~L~~~l~~l~  254 (279)
T KOG0837|consen  188 PELKEPISPIDMEDQEKIKLERKRLRNREAASKCRKRKLDRISRLEDKVKTLKIYNRDLASELSKLK  254 (279)
T ss_pred             cccCCCCCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHH
Confidence            3455444422344444434 34478999999999999999999999999999999999877766553

>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription]

Probab=96.99  E-value=0.0034  Score=59.87  Aligned_cols=58  Identities=29%  Similarity=0.419  Sum_probs=48.0

Q ss_pred             hhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          240 DMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       240 ~~~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      .+.|++..+-..|..||=++|++||.+.|.-..+...+|..|+.||+.|+.+++-++.
T Consensus       186 ~~~~~~~~~y~err~rNN~A~~kSR~~~k~~~~e~~~r~~~leken~~lr~~v~~l~~  243 (269)
T KOG3119|consen  186 SPVEKKDPEYKERRRRNNEAVRKSRDKRKQKEDEMAHRVAELEKENEALRTQVEQLKK  243 (269)
T ss_pred             CchhcCCHHHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455555555556668999999999999999999999999999999999999887754

>KOG4571 consensus Activating transcription factor 4 [Transcription]

Probab=96.75  E-value=0.004  Score=60.26  Aligned_cols=50  Identities=28%  Similarity=0.437  Sum_probs=40.9

Q ss_pred             HHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021244          246 VERRQK-RMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGF  295 (315)
Q Consensus       246 ~eKr~r-R~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~  295 (315)
                      .+|+.+ ..+.|..+|.|-|+||++-.+.|+.+...|+.+|++|+.+.+-+
T Consensus       224 ~~~~~~rkr~qnk~AAtRYRqKkRae~E~l~ge~~~Le~rN~~LK~qa~~l  274 (294)
T KOG4571|consen  224 PEKKLRRKRQQNKAAATRYRQKKRAEKEALLGELEGLEKRNEELKDQASEL  274 (294)
T ss_pred             chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444 45667778999999999999999999999999999999876544

>KOG3863 consensus bZIP transcription factor NRF1 [Transcription]

Probab=95.89  E-value=0.0077  Score=63.26  Aligned_cols=51  Identities=31%  Similarity=0.348  Sum_probs=42.7

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhh
Q 021244          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRK-QKVGFLIL  298 (315)
Q Consensus       248 Kr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~-~~el~~~l  298 (315)
                      |-.||.=|||.||++||+||-.-|..||.+|..|..|-++|.+ +.++++.|
T Consensus       490 rDIRRRgKNkvAAQnCRKRKLd~I~nLE~ev~~l~~eKeqLl~Er~~~d~~L  541 (604)
T KOG3863|consen  490 RDIRRRGKNKVAAQNCRKRKLDCILNLEDEVEKLQKEKEQLLRERDELDSTL  541 (604)
T ss_pred             hccccccccchhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3345667999999999999999999999999999999999866 46666443

>KOG4196 consensus bZIP transcription factor MafK [Transcription]

Probab=95.78  E-value=0.053  Score=47.17  Aligned_cols=50  Identities=24%  Similarity=0.425  Sum_probs=38.7

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021244          244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKV  293 (315)
Q Consensus       244 ~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~e  293 (315)
                      ....|..||-+|||==|+-||-|+-.--.+||.+-..|..+.+.|+.+++
T Consensus        49 VvrlKQrRRTLKNRGYA~sCR~KRv~Qk~eLE~~k~~L~qqv~~L~~e~s   98 (135)
T KOG4196|consen   49 VVRLKQRRRTLKNRGYAQSCRVKRVQQKHELEKEKAELQQQVEKLKEENS   98 (135)
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34678888899999999999999999999999765555555555555443

>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription]

Probab=93.98  E-value=0.0072  Score=60.42  Aligned_cols=64  Identities=28%  Similarity=0.337  Sum_probs=51.5

Q ss_pred             CccCCChhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhh
Q 021244          233 RKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLR-KQKVGFL  296 (315)
Q Consensus       233 rkr~~~~~~~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~-~~~el~~  296 (315)
                      .+........++.++++++-+++||.+|-+||.|||.++..|+.+...+..+|..|. .++++|.
T Consensus       270 ~~~~~s~~~~~~p~~~~~~~lern~~aas~~r~~~k~~~~~~~~~~~~~~~~n~~l~~~~~~~l~  334 (395)
T KOG1414|consen  270 TGGVRSRTVDEDPDERRRRFLERNRAAASRCRQKKKVWVLSLEKKAEELSSENGQLLLNEVELLR  334 (395)
T ss_pred             cccccccccCCCchhhhhhhhhhhhhhhccccCCcccccccccccccchhhhhcccccchhhHHH
Confidence            343434344556778887779999999999999999999999999999999999998 5555553

>KOG1414 consensus Transcriptional activator FOSB/c-Fos and related bZIP transcription factors [Transcription]

Probab=91.04  E-value=0.014  Score=58.31  Aligned_cols=53  Identities=30%  Similarity=0.311  Sum_probs=45.6

Q ss_pred             hhHHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh
Q 021244          243 EKTVERRQKRMIKNRESAAR---SRARKQAYTNELENKVSRLE-EENERLRKQKVGF  295 (315)
Q Consensus       243 e~~~eKr~rR~iKNReSA~r---SR~RKkay~~eLE~kv~~Le-~EN~~L~~~~el~  295 (315)
                      .+.+.|+..|+.+|+.+|.+   ||.||+.|+.+|+.+|+.|+ .+|..|..+++.+
T Consensus       149 ~~~~~~~~~rr~rn~~aA~~~~~~r~~~~~~t~~l~~qv~~l~~~~~~~l~~~is~L  205 (395)
T KOG1414|consen  149 PEPEEKRLLRRERNPVAAAKPIPCRNRKKPSTSPLQRQVELLPPGINSPLSPQISPL  205 (395)
T ss_pred             CcchHHHHhhccccccccCCCCCCccccccccccccchHhhcCCCCCcccCcccccc
Confidence            35789999999999999999   99999999999999999999 7776666555444

>KOG3119 consensus Basic region leucine zipper transcription factor [Transcription]

Probab=87.31  E-value=3.8  Score=39.23  Aligned_cols=72  Identities=18%  Similarity=0.254  Sum_probs=49.0

Q ss_pred             CCChhhhhhHHHHHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 021244          236 GASEDMIEKTVERRQKR----MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLILFMLFCIAVA  307 (315)
Q Consensus       236 ~~~~~~~e~~~eKr~rR----~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~l~~~~~~~~~  307 (315)
                      ..+.+.-++....|++|    +.|-|.+++.--..-+..+.+||.+...|+.++.+|++++..++.+...+-....
T Consensus       185 ~~~~~~~~~~y~err~rNN~A~~kSR~~~k~~~~e~~~r~~~leken~~lr~~v~~l~~el~~~~~~~~~~~~~~~  260 (269)
T KOG3119|consen  185 SSPVEKKDPEYKERRRRNNEAVRKSRDKRKQKEDEMAHRVAELEKENEALRTQVEQLKKELATLRRLFLQLPKPGG  260 (269)
T ss_pred             CCchhcCCHHHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence            33445444444333333    4466666666556667788999999999999999999999988877655544433

>KOG4343 consensus bZIP transcription factor ATF6 [Transcription]

Probab=81.03  E-value=2.2  Score=44.96  Aligned_cols=75  Identities=21%  Similarity=0.113  Sum_probs=50.0

Q ss_pred             hhhhhHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------hhhhh-------h
Q 021244          240 DMIEKTVERRQKRMIKNRESAA---RSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI------LFMLF-------C  303 (315)
Q Consensus       240 ~~~e~~~eKr~rR~iKNReSA~---rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~------l~~~~-------~  303 (315)
                      ..+-++..|..|-.+.-..|-+   +.-.-=++.++.|+.+-+.|+.||..|+++++++..      +++.+       +
T Consensus       277 ~kv~krqQRmIKNResA~~SRkKKKEy~~~Le~rLq~ll~Ene~Lk~ENatLk~qL~~l~~En~~~kvpsp~~~~qKk~R  356 (655)
T KOG4343|consen  277 IKVLKRQQRMIKNRESACQSRKKKKEYMLGLEARLQALLSENEQLKKENATLKRQLDELVSENQRLKVPSPKGRNQKKKR  356 (655)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcCcccccCCCcccccccch
Confidence            3343555555553443333322   223445688999999999999999999999998832      33444       6


Q ss_pred             hhhhccccccc
Q 021244          304 IAVADLVVLLF  314 (315)
Q Consensus       304 ~~~~~~~vl~~  314 (315)
                      .-+|-+++++|
T Consensus       357 kvvaimv~maF  367 (655)
T KOG4343|consen  357 KVVAIMVVMAF  367 (655)
T ss_pred             hhhhHHHHHHH
Confidence            66788888887

>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation

Probab=80.30  E-value=3  Score=31.83  Aligned_cols=21  Identities=48%  Similarity=0.623  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 021244          270 YTNELENKVSRLEEENERLRK  290 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~  290 (315)
                      .|.+|+.++..|+.||.-|+.
T Consensus        22 ~I~eL~~~n~~Le~EN~~Lk~   42 (59)
T PF01166_consen   22 QIAELEERNSQLEEENNLLKQ   42 (59)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            344555555555555554443

These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Proteins containing this signature include: Vertebrate protein TSC-22 [], a transcriptional regulator which seems to act on C-type natriuretic peptide (CNP) promoter. Mammalian protein DIP (DSIP-immunoreactive peptide) [], a protein whose function is not yet known. Drosophila protein bunched [] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis. Caenorhabditis elegans hypothetical protein T18D3.7. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1DIP_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	315
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	9e-17
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	3e-13
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	1e-11
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	4e-11
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	5e-10
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	2e-08
2wt7_B	90	Transcription factor MAFB; transcription, transcri	3e-08
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	7e-08
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	1e-07
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	4e-07
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1 Length = 55

 Score = 72.1 bits (177), Expect = 9e-17
 Identities = 19/44 (43%), Positives = 32/44 (72%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           +R+ R++KNRE+A  SR +K+ Y   LEN+V+ LE +N+ L ++
Sbjct: 1   KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEE 44

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Length = 61

 Score = 62.7 bits (153), Expect = 3e-13
 Identities = 14/44 (31%), Positives = 27/44 (61%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           +R+K + +NR +A+RSR +++ +   LE K   L   N +L+ +
Sbjct: 1   KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSE 44

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D Length = 63

 Score = 58.3 bits (141), Expect = 1e-11
 Identities = 14/45 (31%), Positives = 29/45 (64%)

Query: 247 ERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           E+R+ R  +N+ +AA+ R R++  T+ L+ +  +LE+E   L+ +
Sbjct: 1   EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTE 45

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A Length = 62

 Score = 56.6 bits (137), Expect = 4e-11
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           + +++ ++NR +A++SR RK      LE KV  L+ +N  L   
Sbjct: 1   KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELAST 44

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1 Length = 63

 Score = 53.5 bits (129), Expect = 5e-10
 Identities = 14/44 (31%), Positives = 28/44 (63%)

Query: 248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           ++ K+M +N+ +A R R +K+A    L  +   LE++NE L+++
Sbjct: 2   KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKER 45

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1 Length = 87

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 235 RGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           +  ++  ++K  +  + R  +N  +  +SR + +    E ++KV  L  ENERL+K+
Sbjct: 2   KSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKK 58

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A Length = 90

 Score = 49.6 bits (118), Expect = 3e-08
 Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 224 TLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEE 283
           ++S  +L    RG ++D  E    ++++R +KNR  A   R ++    + LEN+ ++L +
Sbjct: 5   SMSVRELNRHLRGFTKD--EVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQ 62

Query: 284 ENERLRKQK 292
           + E+L+++ 
Sbjct: 63  QVEQLKQEV 71

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus} Length = 107

 Score = 48.9 bits (116), Expect = 7e-08
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 216 GLTSPSMGTLSDPQLLGRKRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELE 275
            LT   + T+S  +L    RG S++  E    ++++R +KNR  AA  R ++     ELE
Sbjct: 7   SLTDEELVTMSVRELNQHLRGLSKE--EIIQLKQRRRTLKNRGYAASCRVKRVTQKEELE 64

Query: 276 NKVSRLEEENERLRKQK 292
            + + L++E E+L  + 
Sbjct: 65  KQKAELQQEVEKLASEN 81

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D Length = 63

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           + ++ +    +  +N E+A RSRARK     +LE+KV  L  +N  L  +
Sbjct: 3   VPESSDPAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENE 52

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A Length = 78

 Score = 46.0 bits (109), Expect = 4e-07
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 234 KRGASEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
           K  A + + + + E + +R  +N  +  +SR + +    E ++KV  L  ENERL+K+
Sbjct: 2   KSKAKKTVDKHSDEYKIRRE-RNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKK 58

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1 Length = 70

 Score = 42.3 bits (99), Expect = 6e-06
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ 291
              E   KR  +NR +    R RK+ +   LE +V  L+E +     +
Sbjct: 4   SDQEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLE 51

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 1e-04
 Identities = 48/299 (16%), Positives = 87/299 (29%), Gaps = 88/299 (29%)

Query: 2   LMRGMQMMGSQADGSSNGKQSQFQPLARQNSMYSLTLDEVQNQLGDLGKPLSSMNLDE-- 59
           ++  +Q +  Q D         +   +  +S   L +  +Q +L  L   L S   +   
Sbjct: 198 VLEMLQKLLYQID-------PNWTSRSDHSSNIKLRIHSIQAELRRL---LKSKPYENCL 247

Query: 60  -LLKNVWTAEV----EMEGTTLAEQTSLQRQASLSLTSALSKKTVDEVWRDIQQSKSSGE 114
            +L NV  A+      +    L   T+  R     +T  LS  T   +  D         
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILL--TT--RFK--QVTDFLSAATTTHISLD--------- 292

Query: 115 KKPRDRQATLGEMTLEDFLVKAGVVAEASSD-----KKIDGPVVGVDQNVVPHFPQQGP- 168
                   TL    ++  L+K   +     D        + P      +++    + G  
Sbjct: 293 ----HHSMTLTPDEVKSLLLK--YLDCRPQDLPREVLTTN-PRR---LSIIAESIRDGLA 342

Query: 169 -WMPYPHPQY---QHSQQS---------------MMGVYMPGQPIPQPM------NMVTG 203
            W  + H          +S                + V+ P   IP  +      +++  
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS 402

Query: 204 AVMDV-------SFPENQVGLTSPSMGTLSDPQLLGRKRGASEDMIE---KTVERRQKR 252
            VM V       S  E Q     P   T+S P +    +   E+        V+     
Sbjct: 403 DVMVVVNKLHKYSLVEKQ-----PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIP 456

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 8e-04
 Identities = 34/273 (12%), Positives = 78/273 (28%), Gaps = 81/273 (29%)

Query: 89  SLTSALSKKTVDEVWRDIQQSKSSGEKKPR------DRQATLGEMTLEDFLVKA-GVVAE 141
              S LSK+ +D     I  SK +     R       +Q  + +  +E+ L      +  
Sbjct: 41  MPKSILSKEEID----HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS 96

Query: 142 ASSDKKIDGPVVGVDQNVVPHFPQQGPWMPYPHPQYQHSQ-QSMMGVYMPGQ-PIPQPMN 199
               ++                    P M       Q  +  +   V+        QP  
Sbjct: 97  PIKTEQRQ------------------PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL 138

Query: 200 MVTGAVMDVSFPENQVGLTSPSMG----------TLSDPQL------------LGRKRGA 237
            +  A++++  P   V +    +                ++            L      
Sbjct: 139 KLRQALLELR-PAKNVLIDG--VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN-- 193

Query: 238 SEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI 297
           S + + + +++   ++  N  S +   +  +   + ++ ++ RL +     +  +   L+
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS----KPYENCLLV 249

Query: 298 L-----------FMLFC--------IAVADLVV 311
           L           F L C          V D + 
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS 282

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	315
1dh3_A	55	Transcription factor CREB; protein-DNA complex, tr	99.52
2wt7_A	63	Proto-oncogene protein C-FOS; transcription, trans	99.27
1t2k_D	61	Cyclic-AMP-dependent transcription factor ATF-2; p	99.21
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	99.16
1jnm_A	62	Proto-oncogene C-JUN; BZIP, protein-DNA complex, t	99.11
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	98.75
1gu4_A	78	CAAT/enhancer binding protein beta; transcription/	98.45
1hjb_A	87	Ccaat/enhancer binding protein beta; transcription	98.37
1gd2_E	70	Transcription factor PAP1; basic leucine zipper, p	98.33
3a5t_A	107	Transcription factor MAFG; protein-DNA complex, BZ	98.19
2wt7_B	90	Transcription factor MAFB; transcription, transcri	97.75
1skn_P	92	DNA-binding domain of SKN-1; complex (transcriptio	95.95
2oqq_A	42	Transcription factor HY5; homodimer leucine zipper	95.54
2c9l_Y	63	EB1, zebra, BZLF1 trans-activator protein; viral p	91.74
2oxj_A	34	Hybrid alpha/beta peptide based on the GCN4-P1 Se	90.49
3m48_A	33	General control protein GCN4; leucine zipper, synt	90.22
3s9g_A	104	Protein hexim1; cyclin T-binding domain (TBD), cyc	89.66
2kz5_A	91	Transcription factor NF-E2 45 kDa subunit; structu	87.77
1kd8_B	36	GABH BLL, GCN4 acid base heterodimer base-D12LA16L	87.58
3c3f_A	34	Alpha/beta peptide with the GCN4-PLI SIDE chain S	86.73
3he5_A	49	Synzip1; heterodimeric coiled-coil, de novo protei	86.47
3c3g_A	33	Alpha/beta peptide with the GCN4-PLI SIDE chain S	85.23
1kd8_A	36	GABH AIV, GCN4 acid base heterodimer acid-D12IA16V	84.99
2bni_A	34	General control protein GCN4; four helix bundle, a	83.34
1uo4_A	34	General control protein GCN4; four helix bundle, c	82.72
1dip_A	78	Delta-sleep-inducing peptide immunoreactive peptid	82.16
2hy6_A	34	General control protein GCN4; protein design, para	81.47
2wq1_A	33	General control protein GCN4; TAA, nucleus, coiled	81.22

>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1

Probab=99.52  E-value=2e-14  Score=105.39  Aligned_cols=50  Identities=38%  Similarity=0.583  Sum_probs=47.0

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       248 Kr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      |+++||++||+||++||.|||+|+++||.+|..|+.||..|..+++.+..
T Consensus         1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~   50 (55)
T 1dh3_A            1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKD   50 (55)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999986653

>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D

Probab=99.27  E-value=1e-11  Score=92.86  Aligned_cols=51  Identities=29%  Similarity=0.504  Sum_probs=47.7

Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          247 ERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       247 eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      |||++|+++||+||++||.||++|+.+||.+|..|+.+|..|..+++.+..
T Consensus         1 Ekr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~   51 (63)
T 2wt7_A            1 EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLK   51 (63)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999886643

>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1

Probab=99.21  E-value=3e-11  Score=89.55  Aligned_cols=50  Identities=28%  Similarity=0.428  Sum_probs=47.0

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       248 Kr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      ||++|+++||+||++||.|||+|+.+||.+|..|+.+|..|..+++.++.
T Consensus         1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~   50 (61)
T 1t2k_D            1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRN   50 (61)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999999999999987753

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=99.16  E-value=5.9e-11  Score=89.10  Aligned_cols=52  Identities=31%  Similarity=0.351  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          246 VERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       246 ~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      .++..++..+||+||++||.||++|+.+||.+|..|+.+|..|..+++.|+.
T Consensus         7 ~d~~~~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~   58 (63)
T 2dgc_A            7 SDPAALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKK   58 (63)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344444456999999999999999999999999999999999999986653

>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A

Probab=99.11  E-value=1.8e-10  Score=85.70  Aligned_cols=50  Identities=28%  Similarity=0.382  Sum_probs=45.7

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       248 Kr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      |+++|..+||+||++||.||++|+.+||.+|..|+.+|..|..++..|..
T Consensus         1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~   50 (62)
T 1jnm_A            1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLRE   50 (62)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35678889999999999999999999999999999999999999987653

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=98.75  E-value=1.4e-08  Score=75.98  Aligned_cols=50  Identities=28%  Similarity=0.445  Sum_probs=41.3

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          248 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       248 Kr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      |+.+++.+||.||+|||.||++++.+||.++..|+.+|..|+.+++-+..
T Consensus         2 k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~   51 (63)
T 1ci6_A            2 KKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAK   51 (63)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67788889999999999999999999999999999999999999876643

>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A

Probab=98.45  E-value=4.3e-07  Score=70.87  Aligned_cols=56  Identities=27%  Similarity=0.325  Sum_probs=47.0

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       242 ~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      +|+..++-..|..||.+||++||.++++...+++.++..|+.||..|+.+++.|..
T Consensus         9 ~dk~d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~   64 (78)
T 1gu4_A            9 VDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSR   64 (78)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCcHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444444555678999999999999999999999999999999999999987753

>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1

Probab=98.37  E-value=1.2e-06  Score=69.72  Aligned_cols=55  Identities=27%  Similarity=0.345  Sum_probs=47.0

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021244          242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFL  296 (315)
Q Consensus       242 ~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~  296 (315)
                      +|+..++-..|..||.++|++||.++++...+++.++..|+.||..|+.+++.|.
T Consensus         9 ~dk~d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~   63 (87)
T 1hjb_A            9 VDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLS   63 (87)
T ss_dssp             -CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444555556677999999999999999999999999999999999999988764

>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1

Probab=98.33  E-value=1.8e-06  Score=66.08  Aligned_cols=47  Identities=26%  Similarity=0.268  Sum_probs=42.6

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021244          250 QKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGFL  296 (315)
Q Consensus       250 ~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~~  296 (315)
                      .+|...||.|++..|.||++|+.+||.+|..|+.+|..|..+++.|+
T Consensus        10 ~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr   56 (70)
T 1gd2_E           10 SKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLR   56 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46778899999999999999999999999999999999888887665

>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}

Probab=98.19  E-value=2.6e-07  Score=76.08  Aligned_cols=52  Identities=29%  Similarity=0.424  Sum_probs=40.8

Q ss_pred             hhhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021244          242 IEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKV  293 (315)
Q Consensus       242 ~e~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~e  293 (315)
                      .+....|.+||..|||.+|+.||.||.+.+++||.++..|..+.+.|..+++
T Consensus        31 ~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En~   82 (107)
T 3a5t_A           31 EEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENA   82 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTTS
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999766655555555444433

>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A

Probab=97.75  E-value=0.00019  Score=57.38  Aligned_cols=52  Identities=23%  Similarity=0.355  Sum_probs=45.4

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021244          244 KTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKVGF  295 (315)
Q Consensus       244 ~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~~el~  295 (315)
                      ....|..||-.|||..|+.||.||..-..+||.++..|..+.+.|+++++-+
T Consensus        23 v~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~   74 (90)
T 2wt7_B           23 VIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRL   74 (90)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567888999999999999999999999999998888888888888776644

>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1

Probab=95.95  E-value=0.0038  Score=49.83  Aligned_cols=33  Identities=21%  Similarity=0.367  Sum_probs=28.0

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 021244          244 KTVERRQKRMIKNRESAARSRARKQAYTNELEN  276 (315)
Q Consensus       244 ~~~eKr~rR~iKNReSA~rSR~RKkay~~eLE~  276 (315)
                      ....|..||..|||.+|++||+||.+.+++|+.
T Consensus        58 l~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~   90 (92)
T 1skn_P           58 RQLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH   90 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence            457888999999999999999999998888764

>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}

Probab=95.54  E-value=0.019  Score=39.75  Aligned_cols=30  Identities=37%  Similarity=0.506  Sum_probs=25.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021244          268 QAYTNELENKVSRLEEENERLRKQKVGFLI  297 (315)
Q Consensus       268 kay~~eLE~kv~~Le~EN~~L~~~~el~~~  297 (315)
                      |+|+.+||.+++.|+..|.+|..++..+..
T Consensus         2 KaYl~eLE~r~k~le~~naeLEervstLq~   31 (42)
T 2oqq_A            2 SAYLSELENRVKDLENKNSELEERLSTLQN   31 (42)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            689999999999999999999888876643

>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y

Probab=91.74  E-value=0.61  Score=34.17  Aligned_cols=39  Identities=31%  Similarity=0.353  Sum_probs=29.9

Q ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021244          253 MIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ  291 (315)
Q Consensus       253 ~iKNReSA~rSR~RKkay~~eLE~kv~~Le~EN~~L~~~  291 (315)
                      .-|||.++++||+|=|..++-...-.+.-.+||++|+--
T Consensus         6 ryknr~asrk~rakfkn~lqh~r~vaaaks~en~rlr~l   44 (63)
T 2c9l_Y            6 RYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRLRLL   44 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHH
Confidence            357999999999998877776666555666788887643

>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*

Probab=90.49  E-value=0.33  Score=32.11  Aligned_cols=29  Identities=28%  Similarity=0.316  Sum_probs=25.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          270 YTNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      .+..||.+|..|-.+|..|..+++-++.+
T Consensus         2 RMnQLE~kVEeLl~~n~~Le~eV~rLk~l   30 (34)
T 2oxj_A            2 RMXQLEXKVXELLXKNXHLEXEVXRLKXL   30 (34)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            47899999999999999999999866644

>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A

Probab=90.22  E-value=0.31  Score=32.12  Aligned_cols=28  Identities=29%  Similarity=0.285  Sum_probs=23.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          271 TNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       271 ~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      +..||.||+.|-.+|..|..+++-++.+
T Consensus         2 M~QLE~kVEeLl~~n~~Le~EV~RLk~L   29 (33)
T 3m48_A            2 MAQLEAKVEELLSKNWNLENEVARLKKL   29 (33)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            5689999999999999999999866654

>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A

Probab=89.66  E-value=1.6  Score=35.45  Aligned_cols=29  Identities=31%  Similarity=0.283  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 021244          268 QAYTNELENKVSRLEEENERLRKQKVGFL  296 (315)
Q Consensus       268 kay~~eLE~kv~~Le~EN~~L~~~~el~~  296 (315)
                      -+.+.+||.+|..|..||+.|+++.+.-+
T Consensus        64 ~~~v~eLe~everL~~ENq~L~~e~~~~~   92 (104)
T 3s9g_A           64 DARVRELELELDRLRAENLQLLTENELHR   92 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            46789999999999999999999998554

>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=87.77  E-value=0.059  Score=42.96  Aligned_cols=26  Identities=31%  Similarity=0.286  Sum_probs=22.7

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHH
Q 021244          244 KTVERRQKRMIKNRESAARSRARKQA  269 (315)
Q Consensus       244 ~~~eKr~rR~iKNReSA~rSR~RKka  269 (315)
                      ....|..||.-|||.+|++||+||..
T Consensus        62 l~lIrdiRRRgKNKvAAqnCRKRKld   87 (91)
T 2kz5_A           62 LALVRDIRRRGKNKVAAQNYRKRKLE   87 (91)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCCCCCC
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            45678899999999999999999854

>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B

Probab=87.58  E-value=0.8  Score=30.64  Aligned_cols=29  Identities=17%  Similarity=0.169  Sum_probs=25.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          270 YTNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      .+..||.+|+.|-.+|..|..+++-|+.+
T Consensus         2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~l   30 (36)
T 1kd8_B            2 KVKQLKAKVEELKSKLWHLKNKVARLKKK   30 (36)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            47899999999999999999999877654

>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1

Probab=86.73  E-value=0.85  Score=30.14  Aligned_cols=29  Identities=10%  Similarity=0.106  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          270 YTNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      .+..||.||+.|-.+|..|..+++-++.+
T Consensus         2 RMnQLEdKVEeLl~~~~~Le~EV~RLk~l   30 (34)
T 3c3f_A            2 RMXQIEXKLEXILSXLYHXENEXARIXKL   30 (34)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            47899999999999999999999866543

>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}

Probab=86.47  E-value=1.1  Score=31.09  Aligned_cols=29  Identities=41%  Similarity=0.518  Sum_probs=22.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          270 YTNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      .+..||.+|..|+.||+.|++++---+++
T Consensus         4 lvaqlenevaslenenetlkkknlhkkdl   32 (49)
T 3he5_A            4 LVAQLENEVASLENENETLKKKNLHKKDL   32 (49)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcccHHHHHhcccHHHH
Confidence            46789999999999999998876433333

>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*

Probab=85.23  E-value=1.5  Score=28.79  Aligned_cols=28  Identities=11%  Similarity=0.176  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          271 TNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       271 ~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      +..||.||+.|-.+|..|..+++-++.+
T Consensus         2 MnQLEdKvEeLl~~~~~Le~EV~RLk~l   29 (33)
T 3c3g_A            2 MKXIEXKLXEIXSKXYHXENXLARIKXL   29 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            5789999999999999999999866543

>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A

Probab=84.99  E-value=0.79  Score=30.67  Aligned_cols=29  Identities=21%  Similarity=0.177  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          270 YTNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      .+..||.||+.|..+|..|..+++-|+.+
T Consensus         2 RMnQLE~kVEeLl~~~~~Le~EV~RL~~l   30 (36)
T 1kd8_A            2 EVKQLEAEVEEIESEVWHLENEVARLEKE   30 (36)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            35789999999999999999998866654

>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...

Probab=83.34  E-value=1.4  Score=29.17  Aligned_cols=29  Identities=10%  Similarity=0.209  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          270 YTNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      .+..||.||+.|-.+|..|..+++-++.+
T Consensus         2 RMnQLEdKvEeLl~~~~~L~~EV~RLk~l   30 (34)
T 2bni_A            2 RMKQIEDKLEEILSKGHHICNELARIKKL   30 (34)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence            46789999999999999999998866543

>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*

Probab=82.72  E-value=1.5  Score=28.98  Aligned_cols=29  Identities=10%  Similarity=0.106  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          270 YTNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      .+..||.||+.|-.+|..|..++.-++.+
T Consensus         2 RM~QLEdKVEeLl~~n~~Le~EV~RLk~L   30 (34)
T 1uo4_A            2 RMKQIEDKGEEILSKLYHIENELARIKKL   30 (34)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            46789999999999999999998766544

>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1

Probab=82.16  E-value=1.4  Score=34.02  Aligned_cols=22  Identities=41%  Similarity=0.443  Sum_probs=14.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 021244          269 AYTNELENKVSRLEEENERLRK  290 (315)
Q Consensus       269 ay~~eLE~kv~~Le~EN~~L~~  290 (315)
                      +.|.+|+.++.+||.||.-|+.
T Consensus        22 e~I~EL~e~~~qLE~EN~~Lk~   43 (78)
T 1dip_A           22 EQIRELVEKNSQLERENTLLKT   43 (78)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4556677777777777666654

>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A

Probab=81.47  E-value=1.8  Score=28.60  Aligned_cols=29  Identities=17%  Similarity=0.174  Sum_probs=24.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          270 YTNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       270 y~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      .+..||.+|+.|-.+|..|..+++-++.+
T Consensus         2 RMnQLEdkVEeLl~~~~~Le~eV~RL~~l   30 (34)
T 2hy6_A            2 KVKQLADAVEELASANYHLANAVARLAKA   30 (34)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            46789999999999999999998766543

>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...

Probab=81.22  E-value=2.7  Score=27.57  Aligned_cols=28  Identities=14%  Similarity=0.071  Sum_probs=23.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 021244          271 TNELENKVSRLEEENERLRKQKVGFLIL  298 (315)
Q Consensus       271 ~~eLE~kv~~Le~EN~~L~~~~el~~~l  298 (315)
                      +..||.||+.|-.+|..|..+++-++.+
T Consensus         2 MnQLEdKVEell~~~~~le~EV~Rl~~l   29 (33)
T 2wq1_A            2 MKQLEDKIEENTSKIYHNTNEIARNTKL   29 (33)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            5789999999999999999998766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	315
d1sknp_	74	Skn-1 {Caenorhabditis elegans [TaxId: 6239]}	91.5
d1uklc_	61	SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}	84.28

>d1sknp_ a.37.1.1 (P:) Skn-1 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: A DNA-binding domain in eukaryotic transcription factors
superfamily: A DNA-binding domain in eukaryotic transcription factors
family: A DNA-binding domain in eukaryotic transcription factors
domain: Skn-1
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.50  E-value=0.041  Score=40.52  Aligned_cols=30  Identities=23%  Similarity=0.357  Sum_probs=24.7

Q ss_pred             hHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 021244          244 KTVERRQKRMIKNRESAARSRARKQAYTNE  273 (315)
Q Consensus       244 ~~~eKr~rR~iKNReSA~rSR~RKkay~~e  273 (315)
                      ....+-.||.=||+.+|++||+||-...++
T Consensus        44 l~lirDIRRRGKNKvAAqnCRKRKld~~d~   73 (74)
T d1sknp_          44 RQLIRKIRRRGKNKVAARTCRQRRTDRHDK   73 (74)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhcccHHHHHHHHHhhhhhhcc
Confidence            346788889999999999999999876543

>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.28  E-value=0.57  Score=32.25  Aligned_cols=25  Identities=24%  Similarity=0.311  Sum_probs=23.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Q 021244          269 AYTNELENKVSRLEEENERLRKQKV  293 (315)
Q Consensus       269 ay~~eLE~kv~~Le~EN~~L~~~~e  293 (315)
                      .|+..|+.++..|++|+..|+.+.+
T Consensus        33 ~YI~~Lq~~~~~L~~e~~~L~~~~~   57 (61)
T d1uklc_          33 DYIKYLQQVNHKLRQENMVLKLANQ   57 (61)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999998774