Citrus Sinensis ID: 021254

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-----
Protein Sequence
MNSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccEEEEEccccEEccccccccccccEEEEEEccEEEEEEEEEcccHHHHHHHHHHcccEEEEccccHHHHHHHHHHHcccccEEEEEccccccccccccEEEcccccccccccEEEEEccHHHHcccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccccccHccHHHccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccHHccccHHHHHccccccccccccccccccccccccccEEEEEEccccEEEccccccccccEEEEEEEccEEEEEEEEccccHHHHHHHHHHHHHHEHHHHHHHHHHHHHHHHccccccEEEEEEEEccEEEccccHHHHHHHHcHcHccEEEEEccccEEEEccccccEEEcccccccHHHHHHHHHHHHHHcccHcHHHHHHHHccccc
Coil and Loop (DISEMBL)
mnslneifgtnesdhfsSLSAELfgksaedpvcsheeinfgtifdldlrrpchegknvgqgtcedilpidktlcnphhelfsysiqqtslldqgsnmqsclgiadeeyynpylyfmgwqnlpqiapsywprtplrepiaglpitlvldldetlvhssfdnckdadfsfpihskmevqtvfvrqrpyLHMFLEAVASMFDVVIFTAGqsiyagqlldildpnqtligqrvyrdscvfadgeylkdLTILGRDLariaivdntpqVFQLQvdngipieswfgdpsdSALLSLLMFLETLvgaddvrpiikqkygsqe
Flexible Loop (DISEMBL)
mnslneifgtnesdhFSSLSAELFGKSAEDPVCSHEEINFgtifdldlrrpCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETlvgaddvrpiikqkygsqe
Low Complexity Region (SEG)
MNSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE
Disordered region (IsUnstruct)
******************************PVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPII********
Disordered Region (DISOPRED)
******************************************************************************************************IADEEYYNPYLYFMGW*********************GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPII*QK*****
Disordered Region (DISEMBL)
MNSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE
Disordered Region (DISPRO)
*NSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKN*GQGTCEDILPIDKTLCNPHHELFSYSIQQT************LGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKY****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSLNEIFGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	315	2.2.26 [Sep-21-2011]
Q54GB2	567	CTD small phosphatase-lik	yes	no	0.631	0.350	0.472	3e-49
Q8BG15	465	CTD small phosphatase-lik	yes	no	0.650	0.440	0.440	1e-45
Q5XIK8	465	CTD small phosphatase-lik	yes	no	0.650	0.440	0.440	1e-45
Q08BB5	469	CTD small phosphatase-lik	yes	no	0.650	0.437	0.435	1e-45
Q05D32	466	CTD small phosphatase-lik	yes	no	0.650	0.439	0.440	1e-45
A4QNX6	460	CTD small phosphatase-lik	no	no	0.644	0.441	0.434	3e-45
Q5F3Z7	466	CTD small phosphatase-lik	yes	no	0.650	0.439	0.435	4e-45
Q801R4	466	CTD small phosphatase-lik	N/A	no	0.650	0.439	0.430	6e-45
Q66KM5	466	CTD small phosphatase-lik	yes	no	0.650	0.439	0.435	7e-45
Q3KQB6	466	CTD small phosphatase-lik	N/A	no	0.650	0.439	0.430	1e-44

>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2 PE=3 SV=1

 Score =  195 bits (496), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 96/203 (47%), Positives = 133/203 (65%), Gaps = 4/203 (1%)

Query: 109 YNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSF 168
           +NP+L+     N   + P      P +E  +   I+LVLDLDETLVH S +  +    +F
Sbjct: 360 FNPFLFIKQLANATTMPPPVA--LPPKEH-SSPKISLVLDLDETLVHCSTEPLEQPHLTF 416

Query: 169 PIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQR 228
           P+        VF ++RP+   FL  V+ +F+V+IFTA Q +YA +LL+++DPN   I  R
Sbjct: 417 PVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK-IKYR 475

Query: 229 VYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALL 288
           +YRDSCV+ DG YLKDL++LGRDL ++ I+DN+PQ F  QVDNGIPIESWF D +D  LL
Sbjct: 476 LYRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELL 535

Query: 289 SLLMFLETLVGADDVRPIIKQKY 311
            L+ FLE+L   +DVRP I+ K+
Sbjct: 536 QLVPFLESLTNVEDVRPHIRDKF 558

Probable phosphatase.
Dictyostelium discoideum (taxid: 44689)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: -

>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2 PE=1 SV=1

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 136/209 (65%), Gaps = 4/209 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 250 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 307

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP + 
Sbjct: 308 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 367

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +
Sbjct: 368 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 427

Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
           D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct: 428 DNELLKLIPFLEKLVELNEDVRPHIRDRF 456

Probable phosphatase.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus GN=Ctdspl2 PE=2 SV=1

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 136/209 (65%), Gaps = 4/209 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 250 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 307

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP + 
Sbjct: 308 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 367

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +
Sbjct: 368 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 427

Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
           D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct: 428 DNELLKLIPFLEKLVELNEDVRPHIRDRF 456

Probable phosphatase.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a PE=2 SV=1

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 137/209 (65%), Gaps = 4/209 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 254 DWEVFDPYFFIKHVPPLTEEQLTRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 311

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 312 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQ 371

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +
Sbjct: 372 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAYQLSNGIPIESWFVDKN 431

Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
           D+ LL L+ FLE LV   +DVRP I++++
Sbjct: 432 DNELLKLVPFLEKLVELNEDVRPYIRERF 460

Probable phosphatase.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2 PE=1 SV=2

 Score =  183 bits (465), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 136/209 (65%), Gaps = 4/209 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQ 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428

Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
           D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct: 429 DNELLKLIPFLEKLVELNEDVRPHIRDRF 457

Probable phosphatase.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b PE=2 SV=1

 Score =  182 bits (462), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/207 (43%), Positives = 135/207 (65%), Gaps = 4/207 (1%)

Query: 107 EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKDAD 165
           E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +   DA 
Sbjct: 247 EVFDPYFFIKHVPPLTEEQLTRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELDDAA 304

Query: 166 FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLI 225
            +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + L+
Sbjct: 305 LTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLV 364

Query: 226 GQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDS 285
             R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +DS
Sbjct: 365 RHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDRNDS 424

Query: 286 ALLSLLMFLETLVG-ADDVRPIIKQKY 311
            LL L+ FLE LV   +DVRP +++++
Sbjct: 425 ELLKLVPFLEKLVELNEDVRPHVRERF 451

Probable phosphatase.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2 PE=2 SV=2

 Score =  182 bits (461), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 136/209 (65%), Gaps = 4/209 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQ 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428

Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
           D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct: 429 DNELLKLIPFLEKLVELNEDVRPHIRDRF 457

Probable phosphatase.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis GN=ctdspl2-a PE=2 SV=1

 Score =  181 bits (459), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 90/209 (43%), Positives = 135/209 (64%), Gaps = 4/209 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYFFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428

Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
           D  LL L+ FLE LV   +DVRP ++ ++
Sbjct: 429 DKELLKLVPFLENLVELNEDVRPHVRDRF 457

Probable phosphatase.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis GN=ctdspl2 PE=2 SV=1

 Score =  181 bits (458), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 135/209 (64%), Gaps = 4/209 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYYFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428

Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
           D  LL L+ FLE LV   +DVRP I+ ++
Sbjct: 429 DKELLKLVPFLENLVELNEDVRPHIRDRF 457

Probable phosphatase.

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis GN=ctdspl2-b PE=2 SV=1

 Score =  180 bits (456), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/209 (43%), Positives = 135/209 (64%), Gaps = 4/209 (1%)

Query: 105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP-ITLVLDLDETLVHSSFDNCKD 163
           D E ++PY +      L +   +  P  PL+      P  +LVLDLDETLVH S +  +D
Sbjct: 251 DWEVFDPYFFIKHVPPLTEEQLNRKPALPLK--TRSTPEFSLVLDLDETLVHCSLNELED 308

Query: 164 ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQT 223
           A  +FP+  +  +  V+VR RP+   FLE ++ ++++++FTA + +YA +LL+ILDP + 
Sbjct: 309 AALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKR 368

Query: 224 LIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPS 283
           L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D +
Sbjct: 369 LVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKN 428

Query: 284 DSALLSLLMFLETLVG-ADDVRPIIKQKY 311
           D  LL L+ FL+ LV   +DVRP I+ ++
Sbjct: 429 DKELLKLVPFLQKLVELNEDVRPHIRDRF 457

Probable phosphatase.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	315
297740632	479	unnamed protein product [Vitis vinifera]	0.736	0.484	0.556	2e-70
225463384	484	PREDICTED: uncharacterized protein LOC10	0.736	0.479	0.556	2e-70
255557435	474	conserved hypothetical protein [Ricinus	0.790	0.525	0.513	1e-69
147839779	482	hypothetical protein VITISV_035567 [Viti	0.815	0.533	0.503	7e-69
224116454	377	predicted protein [Populus trichocarpa]	0.730	0.610	0.547	8e-69
359487040	522	PREDICTED: uncharacterized protein LOC10	0.736	0.444	0.553	7e-68
296090552	570	unnamed protein product [Vitis vinifera]	0.736	0.407	0.553	8e-68
147798518	506	hypothetical protein VITISV_037605 [Viti	0.736	0.458	0.553	1e-67
357450577	460	CTD small phosphatase-like protein [Medi	0.806	0.552	0.505	5e-67
357450579	469	CTD small phosphatase-like protein [Medi	0.806	0.541	0.505	6e-67

>gi|297740632|emb|CBI30814.3| unnamed protein product [Vitis vinifera]

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 129/232 (55%), Positives = 169/232 (72%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPI 143
           +I Q    +Q S++  C      E ++P+L+     +L  +  +  P    +E      I
Sbjct: 248 AIHQMRSCNQESDINPCSDQDQAECFDPHLFIRNLPDLSDVVANSRPTILPKETRKKKSI 307

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLVLDLDETLVHS+ ++C DADF+FP+   M+  TV+V+QRPYLH FLE VA MF++V+F
Sbjct: 308 TLVLDLDETLVHSTLEHCDDADFTFPVFFNMKDHTVYVKQRPYLHTFLERVAEMFEIVVF 367

Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           TA QSIYA QLLDILDP+      R YR+SC+F+DG Y KDLT+LG DLA++AI+DN+PQ
Sbjct: 368 TASQSIYAEQLLDILDPDGKFFSHRAYRESCIFSDGSYTKDLTVLGIDLAKVAIIDNSPQ 427

Query: 264 VFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
           VFQLQV+NGIPI+SWF DPSD AL+SLL FLETLV ADDVRPII +++G++E
Sbjct: 428 VFQLQVNNGIPIKSWFDDPSDHALISLLPFLETLVDADDVRPIIAKRFGNKE 479

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463384|ref|XP_002271705.1| PREDICTED: uncharacterized protein LOC100258847 [Vitis vinifera]

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 129/232 (55%), Positives = 169/232 (72%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPI 143
           +I Q    +Q S++  C      E ++P+L+     +L  +  +  P    +E      I
Sbjct: 253 AIHQMRSCNQESDINPCSDQDQAECFDPHLFIRNLPDLSDVVANSRPTILPKETRKKKSI 312

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLVLDLDETLVHS+ ++C DADF+FP+   M+  TV+V+QRPYLH FLE VA MF++V+F
Sbjct: 313 TLVLDLDETLVHSTLEHCDDADFTFPVFFNMKDHTVYVKQRPYLHTFLERVAEMFEIVVF 372

Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           TA QSIYA QLLDILDP+      R YR+SC+F+DG Y KDLT+LG DLA++AI+DN+PQ
Sbjct: 373 TASQSIYAEQLLDILDPDGKFFSHRAYRESCIFSDGSYTKDLTVLGIDLAKVAIIDNSPQ 432

Query: 264 VFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
           VFQLQV+NGIPI+SWF DPSD AL+SLL FLETLV ADDVRPII +++G++E
Sbjct: 433 VFQLQVNNGIPIKSWFDDPSDHALISLLPFLETLVDADDVRPIIAKRFGNKE 484

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557435|ref|XP_002519748.1| conserved hypothetical protein [Ricinus communis] gi|223541165|gb|EEF42721.1| conserved hypothetical protein [Ricinus communis]

 Score =  269 bits (687), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 129/251 (51%), Positives = 178/251 (70%), Gaps = 2/251 (0%)

Query: 65  DILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQI 124
           D+   ++ +  P +     +I Q    +  S++ +    A+E  ++P  +      L  +
Sbjct: 226 DMKSCEEGMIEPDNTSLYLAINQIRSCNHESDLNTDPDQAEE--FDPQFFIKNLPELSDV 283

Query: 125 APSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR 184
             +Y P  P +E +    +TLVLDLDETLVHS+ ++C DADF+F +   ++  TV+V++R
Sbjct: 284 ESNYHPSVPPKESLMKKSVTLVLDLDETLVHSTLEHCDDADFTFTVFFNLKEHTVYVKRR 343

Query: 185 PYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKD 244
           P+LH FLE VA +F+VVIFTA QSIYA QLLDILDP + LI +RVYR+SC+F DG Y KD
Sbjct: 344 PHLHTFLERVAELFEVVIFTASQSIYAAQLLDILDPEKKLISRRVYRESCIFTDGSYTKD 403

Query: 245 LTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVR 304
           LT+LG DLA++AI+DN+PQVF LQV+NGIPI+SWF DPSD AL+SLL FLETLV ADDVR
Sbjct: 404 LTVLGVDLAKVAIIDNSPQVFSLQVNNGIPIKSWFSDPSDCALISLLPFLETLVDADDVR 463

Query: 305 PIIKQKYGSQE 315
           PII +++G++E
Sbjct: 464 PIIAKRFGNKE 474

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147839779|emb|CAN65912.1| hypothetical protein VITISV_035567 [Vitis vinifera]

 Score =  266 bits (681), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 133/264 (50%), Positives = 178/264 (67%), Gaps = 7/264 (2%)

Query: 53  HEGKNVGQGT-CEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNP 111
            E +N+   T CE+       +    +     +I Q    +Q S++  C      E ++P
Sbjct: 225 REARNIHSPTSCEE------AMVGSDNSSLYLAIHQMRSCNQESDINPCSDQDQAECFDP 278

Query: 112 YLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIH 171
           +L+     +L  +  +  P    +E      ITLVLDLDETLVHS+ ++C DADF+FP+ 
Sbjct: 279 HLFIRNLPDLSDVVANSRPTILPKETRKKKSITLVLDLDETLVHSTLEHCDDADFTFPVF 338

Query: 172 SKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR 231
             M+  TV+V+QRPYLH FLE VA MF++V+FTA QSIYA QLLDILDP+      R YR
Sbjct: 339 FNMKDHTVYVKQRPYLHTFLERVAEMFEIVVFTASQSIYAEQLLDILDPDGKFFSHRAYR 398

Query: 232 DSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLL 291
           +SC+F+DG Y KDLT+LG DLA++AI+DN+PQVFQLQV+NGIPI+SWF D SD AL+SLL
Sbjct: 399 ESCIFSDGSYTKDLTVLGIDLAKVAIIDNSPQVFQLQVNNGIPIKSWFDDLSDHALISLL 458

Query: 292 MFLETLVGADDVRPIIKQKYGSQE 315
            FLETLV ADDVRPII +++G++E
Sbjct: 459 PFLETLVDADDVRPIIAKRFGNKE 482

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116454|ref|XP_002317305.1| predicted protein [Populus trichocarpa] gi|222860370|gb|EEE97917.1| predicted protein [Populus trichocarpa]

 Score =  266 bits (680), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 127/232 (54%), Positives = 173/232 (74%), Gaps = 2/232 (0%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPI 143
           +I Q    DQ S++ +    A++  ++P  +      L  +  ++ P    +EP     I
Sbjct: 148 AINQIRSCDQESDLITDSDQAED--FDPQFFIRNLPELSDVVSNFRPSISPKEPCRRKSI 205

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLVLDLDETLVHS+ ++C DADF+F +   M+  TV+V+QRP++H FLE VA MF+VVIF
Sbjct: 206 TLVLDLDETLVHSTLEHCDDADFTFTVFFNMKEHTVYVKQRPHVHTFLERVAEMFEVVIF 265

Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           TA QSIYA QLLD+LDP++ LI +R+YR+SC+F+DG Y KDLT+LG DLA++AI+DN+PQ
Sbjct: 266 TASQSIYAAQLLDMLDPDRKLISRRIYRESCIFSDGSYTKDLTVLGVDLAKVAIIDNSPQ 325

Query: 264 VFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
           VF+LQV+NGIPI+SWF D SD AL+SLL FLETLV ADDVRPII +++G++E
Sbjct: 326 VFRLQVNNGIPIKSWFSDSSDCALISLLPFLETLVNADDVRPIIAKRFGNKE 377

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487040|ref|XP_002265614.2| PREDICTED: uncharacterized protein LOC100267967 [Vitis vinifera]

 Score =  263 bits (672), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 129/233 (55%), Positives = 171/233 (73%), Gaps = 1/233 (0%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADE-EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP 142
           S Q    L++  ++   L  +DE + ++P+LY   + +L  + P+  P     E      
Sbjct: 290 SHQTKPPLNEEHDVNPSLFDSDEADCFDPHLYIRNFPDLSDVEPNSLPTLLPEEESKRKR 349

Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           ITLVLDLDETLVHS+ + C  ADF+FP+   M+  T++VRQRP+L MFLE VA MF++++
Sbjct: 350 ITLVLDLDETLVHSTLEPCDHADFTFPVFFNMKEHTIYVRQRPFLQMFLERVAEMFEIIV 409

Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA QSIYA QLLDILDP++ L   R YR+SC+F+DG Y KDLT+LG DLA++AI+DN+P
Sbjct: 410 FTASQSIYAEQLLDILDPDRKLFSGRAYRESCIFSDGSYTKDLTVLGIDLAKVAIIDNSP 469

Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
           QVF+LQVDNGIPI+SWF DPSD AL+SLL FLETLV ADDVRPII +++G +E
Sbjct: 470 QVFRLQVDNGIPIKSWFDDPSDRALISLLPFLETLVDADDVRPIIAKRFGVKE 522

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090552|emb|CBI40902.3| unnamed protein product [Vitis vinifera]

 Score =  263 bits (672), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 129/233 (55%), Positives = 171/233 (73%), Gaps = 1/233 (0%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADE-EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP 142
           S Q    L++  ++   L  +DE + ++P+LY   + +L  + P+  P     E      
Sbjct: 338 SHQTKPPLNEEHDVNPSLFDSDEADCFDPHLYIRNFPDLSDVEPNSLPTLLPEEESKRKR 397

Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           ITLVLDLDETLVHS+ + C  ADF+FP+   M+  T++VRQRP+L MFLE VA MF++++
Sbjct: 398 ITLVLDLDETLVHSTLEPCDHADFTFPVFFNMKEHTIYVRQRPFLQMFLERVAEMFEIIV 457

Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA QSIYA QLLDILDP++ L   R YR+SC+F+DG Y KDLT+LG DLA++AI+DN+P
Sbjct: 458 FTASQSIYAEQLLDILDPDRKLFSGRAYRESCIFSDGSYTKDLTVLGIDLAKVAIIDNSP 517

Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
           QVF+LQVDNGIPI+SWF DPSD AL+SLL FLETLV ADDVRPII +++G +E
Sbjct: 518 QVFRLQVDNGIPIKSWFDDPSDRALISLLPFLETLVDADDVRPIIAKRFGVKE 570

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147798518|emb|CAN65472.1| hypothetical protein VITISV_037605 [Vitis vinifera]

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 129/233 (55%), Positives = 171/233 (73%), Gaps = 1/233 (0%)

Query: 84  SIQQTSLLDQGSNMQSCLGIADE-EYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLP 142
           S Q    L++  ++   L  +DE + ++P+LY   + +L  + P+  P     E      
Sbjct: 274 SHQTKPPLNEEHDVNPSLFDSDEADCFDPHLYIRNFPDLSDVEPNSLPTLLPEEESKRKR 333

Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           ITLVLDLDETLVHS+ + C  ADF+FP+   M+  T++VRQRP+L MFLE VA MF++++
Sbjct: 334 ITLVLDLDETLVHSTLEPCDHADFTFPVFFNMKEHTIYVRQRPFLQMFLERVAEMFEIIV 393

Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA QSIYA QLLDILDP++ L   R YR+SC+F+DG Y KDLT+LG DLA++AI+DN+P
Sbjct: 394 FTASQSIYAEQLLDILDPDRKLFSGRAYRESCIFSDGSYTKDLTVLGIDLAKVAIIDNSP 453

Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
           QVF+LQVDNGIPI+SWF DPSD AL+SLL FLETLV ADDVRPII +++G +E
Sbjct: 454 QVFRLQVDNGIPIKSWFDDPSDRALISLLPFLETLVDADDVRPIIAKRFGVKE 506

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357450577|ref|XP_003595565.1| CTD small phosphatase-like protein [Medicago truncatula] gi|355484613|gb|AES65816.1| CTD small phosphatase-like protein [Medicago truncatula]

 Score =  260 bits (665), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 138/273 (50%), Positives = 188/273 (68%), Gaps = 19/273 (6%)

Query: 51  PCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYN 110
           P H+  +   G   DIL  ++ +          +I Q    +Q SN++  L  A  E ++
Sbjct: 199 PAHDD-DAKVGCTTDILSCEEAIMVRESASLYSAIAQIRSCNQESNVKDDLDKA--ECFD 255

Query: 111 PYLYFMGWQNLPQIA-------PSYWPR-TPLREPIAGLPITLVLDLDETLVHSSFDNCK 162
           P  +    +NLP+++       P+  P+ +P R+ +     TLVLDLDETLVHS+ ++C 
Sbjct: 256 PQSFI---KNLPELSEVELNGQPTLAPKQSPRRKSV-----TLVLDLDETLVHSTLEHCD 307

Query: 163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
           DADF+F I   M+   V+V+QRP+LH FLE V+ MF+VVIFTA QSIYA QLLDILDP++
Sbjct: 308 DADFTFNIFFNMKDYIVYVKQRPFLHKFLERVSDMFEVVIFTASQSIYANQLLDILDPDE 367

Query: 223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDP 282
             I +R+YR+SC+F+DG Y KDLTILG DLA++ I+DN+PQVF+LQV+NGIPI+SWF DP
Sbjct: 368 KFISRRLYRESCMFSDGNYTKDLTILGIDLAKVVIIDNSPQVFRLQVNNGIPIKSWFDDP 427

Query: 283 SDSALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
           SD AL+SLL FLETL  ADDVRPII ++YG++E
Sbjct: 428 SDCALMSLLPFLETLADADDVRPIIAKRYGNKE 460

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357450579|ref|XP_003595566.1| CTD small phosphatase-like protein [Medicago truncatula] gi|355484614|gb|AES65817.1| CTD small phosphatase-like protein [Medicago truncatula]

 Score =  260 bits (664), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 138/273 (50%), Positives = 188/273 (68%), Gaps = 19/273 (6%)

Query: 51  PCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYN 110
           P H+  +   G   DIL  ++ +          +I Q    +Q SN++  L  A  E ++
Sbjct: 208 PAHDD-DAKVGCTTDILSCEEAIMVRESASLYSAIAQIRSCNQESNVKDDLDKA--ECFD 264

Query: 111 PYLYFMGWQNLPQIA-------PSYWPR-TPLREPIAGLPITLVLDLDETLVHSSFDNCK 162
           P  +    +NLP+++       P+  P+ +P R+ +     TLVLDLDETLVHS+ ++C 
Sbjct: 265 PQSFI---KNLPELSEVELNGQPTLAPKQSPRRKSV-----TLVLDLDETLVHSTLEHCD 316

Query: 163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
           DADF+F I   M+   V+V+QRP+LH FLE V+ MF+VVIFTA QSIYA QLLDILDP++
Sbjct: 317 DADFTFNIFFNMKDYIVYVKQRPFLHKFLERVSDMFEVVIFTASQSIYANQLLDILDPDE 376

Query: 223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDP 282
             I +R+YR+SC+F+DG Y KDLTILG DLA++ I+DN+PQVF+LQV+NGIPI+SWF DP
Sbjct: 377 KFISRRLYRESCMFSDGNYTKDLTILGIDLAKVVIIDNSPQVFRLQVNNGIPIKSWFDDP 436

Query: 283 SDSALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
           SD AL+SLL FLETL  ADDVRPII ++YG++E
Sbjct: 437 SDCALMSLLPFLETLADADDVRPIIAKRYGNKE 469

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	315
TAIR|locus:2170458	456	SSP4 "SCP1-like small phosphat	0.790	0.546	0.480	7.1e-61
TAIR|locus:2143019	305	SSP5 "SCP1-like small phosphat	0.812	0.839	0.474	1.3e-59
TAIR|locus:2117661	446	SSP4b "SCP1-like small phospha	0.647	0.457	0.536	5.9e-57
DICTYBASE|DDB_G0290365	567	ctdspl2 "CTD small phosphatase	0.644	0.358	0.478	9.8e-48
UNIPROTKB|F1SN06	405	F1SN06 "Uncharacterized protei	0.739	0.575	0.413	3.1e-44
UNIPROTKB|E1B8W1	466	CTDSPL2 "Uncharacterized prote	0.647	0.437	0.447	3.9e-44
UNIPROTKB|F6XTC9	466	CTDSPL2 "Uncharacterized prote	0.647	0.437	0.447	3.9e-44
UNIPROTKB|Q05D32	466	CTDSPL2 "CTD small phosphatase	0.647	0.437	0.447	3.9e-44
MGI|MGI:1196405	465	Ctdspl2 "CTD (carboxy-terminal	0.647	0.438	0.447	3.9e-44
RGD|1309219	465	Ctdspl2 "CTD (carboxy-terminal	0.647	0.438	0.447	3.9e-44

TAIR|locus:2170458 SSP4 "SCP1-like small phosphatase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 124/258 (48%), Positives = 176/258 (68%)

Query:    59 GQGTCEDILPIDKTLCNPHHELF-SYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMG 117
             G    +DI      +   +H+LF +++  ++  ++     +S   +A++  ++P L+   
Sbjct:   207 GSANKDDIKSDTDKINLDNHDLFLAFNRTRSYNVEPDDRAES--EVAED--FDPQLFIKN 262

Query:   118 WQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQ 177
                L  +  +YWPR  LR+      +TLVLDLDETLVHS+ ++C  ADFSF +   M+  
Sbjct:   263 QPELSDVVSNYWPRDTLRKK----SVTLVLDLDETLVHSTLESCNVADFSFRVFFNMQEN 318

Query:   178 TVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA 237
             TV+VRQRP+L+ FLE V  +F VVIFTA  SIYA QLLDILDP+   I QR YRDSC+  
Sbjct:   319 TVYVRQRPHLYRFLERVGELFHVVIFTASHSIYASQLLDILDPDGKFISQRFYRDSCILL 378

Query:   238 DGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETL 297
             DG Y KDLT+LG DLA++AI+DN PQV++LQ++NGIPI+SW+ DP+D  L+++L FLETL
Sbjct:   379 DGIYTKDLTVLGLDLAKVAIIDNCPQVYRLQINNGIPIKSWYDDPTDDGLITILPFLETL 438

Query:   298 VGADDVRPIIKQKYGSQE 315
               ADDVRPII +++G++E
Sbjct:   439 AVADDVRPIIGRRFGNKE 456

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0008420 "CTD phosphatase activity" evidence=IDA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0009610 "response to symbiotic fungus" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

TAIR|locus:2143019 SSP5 "SCP1-like small phosphatase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 128/270 (47%), Positives = 180/270 (66%)

Query:    60 QGTCEDILPIDKTLCNPHHELFS----YSIQQTSLLD------QGSNMQS-CL-GIADEE 107
             Q   + +L +D +  +P+  L S    Y   ++S L+      Q S + S C+    DEE
Sbjct:    15 QNPYDRLLALDTSTVDPNCNLDSVSAIYLAMKSSKLECVDERGQDSLITSVCMEDEEDEE 74

Query:   108 Y--YNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDAD 165
                ++PYL+     NL  + P++ P    ++  +  PI+LVLDLDETLVHS+ + C + D
Sbjct:    75 LDEFDPYLFIKNLPNLSSVVPTFRPVLLPKQTRSCPPISLVLDLDETLVHSTLEPCGEVD 134

Query:   166 FSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLI 225
             F+FP++   E   V+VR RP+L  F+E V+ +F+++IFTA QSIYA QLL++LDP + L 
Sbjct:   135 FTFPVNFNEEEHMVYVRCRPHLKEFMERVSRLFEIIIFTASQSIYAEQLLNVLDPKRKLF 194

Query:   226 GQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDS 285
               RVYRDSCVF DG YLKDL++LGRDL+R+ IVDN+PQ F  QV+NG+PIESWF DPSD 
Sbjct:   195 RHRVYRDSCVFFDGNYLKDLSVLGRDLSRVIIVDNSPQAFGFQVENGVPIESWFNDPSDK 254

Query:   286 ALLSLLMFLETLVGADDVRPIIKQKYGSQE 315
              LL LL FLE+L+G +DVRP+I +K+  +E
Sbjct:   255 ELLHLLPFLESLIGVEDVRPMIAKKFNLRE 284

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IDA

GO:0005694 "chromosome" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0008420 "CTD phosphatase activity" evidence=IDA

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2117661 SSP4b "SCP1-like small phosphatase 4b" [Arabidopsis thaliana (taxid:3702)]

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 111/207 (53%), Positives = 150/207 (72%)

Query:   107 EYYNPYLYFMGWQNLPQIAPSYWP--RTPLREPIAGLPITLVLDLDETLVHSSFDNCKDA 164
             E ++P ++      L  +  +Y+P  + P   P     +TLVLDLDETLVHS+ + C+D 
Sbjct:   232 EDFDPQIFLRNQPELADVVFNYFPDMQQPRDSP-KRKAVTLVLDLDETLVHSTLEVCRDT 290

Query:   165 DFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTL 224
             DFSF +   M+  TV+V+QRPYL+ FLE V  +F VVIFTA  SIYA QLLDILDP+   
Sbjct:   291 DFSFRVTFNMQENTVYVKQRPYLYRFLERVVELFHVVIFTASHSIYASQLLDILDPDGKF 350

Query:   225 IGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSD 284
             + QR YRDSC+ +DG Y KDLT+LG DLA++AIVDN PQV++LQ++NGIPI+SW+ DP+D
Sbjct:   351 VSQRFYRDSCILSDGIYTKDLTVLGLDLAKVAIVDNCPQVYRLQINNGIPIKSWYDDPTD 410

Query:   285 SALLSLLMFLETLVGADDVRPIIKQKY 311
               L++LL FLETL  A+DVRP+I +++
Sbjct:   411 DGLITLLPFLETLADANDVRPVIAKRF 437

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0008420 "CTD phosphatase activity" evidence=IDA

DICTYBASE|DDB_G0290365 ctdspl2 "CTD small phosphatase-like protein 2" [Dictyostelium discoideum (taxid:44689)]

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 99/207 (47%), Positives = 136/207 (65%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDA 164
             DEE +NP+L+     N   + P      P +E  +   I+LVLDLDETLVH S +  +  
Sbjct:   356 DEEEFNPFLFIKQLANATTMPPPV--ALPPKEH-SSPKISLVLDLDETLVHCSTEPLEQP 412

Query:   165 DFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTL 224
               +FP+        VF ++RP+   FL  V+ +F+V+IFTA Q +YA +LL+++DPN   
Sbjct:   413 HLTFPVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK- 471

Query:   225 IGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSD 284
             I  R+YRDSCV+ DG YLKDL++LGRDL ++ I+DN+PQ F  QVDNGIPIESWF D +D
Sbjct:   472 IKYRLYRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDEND 531

Query:   285 SALLSLLMFLETLVGADDVRPIIKQKY 311
               LL L+ FLE+L   +DVRP I+ K+
Sbjct:   532 KELLQLVPFLESLTNVEDVRPHIRDKF 558

GO:0016791 "phosphatase activity" evidence=IEA

GO:0016311 "dephosphorylation" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

UNIPROTKB|F1SN06 F1SN06 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 100/242 (41%), Positives = 152/242 (62%)

Query:    75 NPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEY--YNPYLYFMGWQNLPQIAPSYWPRT 132
             +P++ L S SI      D G +        +E++  ++PY YF+  +++P +      R 
Sbjct:   159 SPYNHL-SVSIIAPVTPDSGYSSAHAEATYEEDWEVFDPY-YFI--KHVPPLTEEQLNRK 214

Query:   133 P-LREPIAGLP-ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMF 190
             P L       P  +LVLDLDETLVH S +  +DA  +FP+  +  +  V+VR RP+   F
Sbjct:   215 PALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREF 274

Query:   191 LEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGR 250
             LE ++ M+++++FTA + +YA +LL+ILDP + L+  R++R+ CV   G Y+KDL ILGR
Sbjct:   275 LERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGNYIKDLNILGR 334

Query:   251 DLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGA-DDVRPIIKQ 309
             DL++  I+DN+PQ F  Q+ NGIPIESWF D +D+ LL L+ FLE LV   +DVRP I+ 
Sbjct:   335 DLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKLVELNEDVRPHIRD 394

Query:   310 KY 311
             ++
Sbjct:   395 RF 396

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|E1B8W1 CTDSPL2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 94/210 (44%), Positives = 139/210 (66%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   251 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 307

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   308 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 367

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDP 282
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D 
Sbjct:   368 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDK 427

Query:   283 SDSALLSLLMFLETLVGA-DDVRPIIKQKY 311
             +D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct:   428 NDNELLKLIPFLEKLVELNEDVRPHIRDRF 457

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|F6XTC9 CTDSPL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 94/210 (44%), Positives = 139/210 (66%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   251 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 307

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   308 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 367

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDP 282
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D 
Sbjct:   368 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDK 427

Query:   283 SDSALLSLLMFLETLVGA-DDVRPIIKQKY 311
             +D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct:   428 NDNELLKLIPFLEKLVELNEDVRPHIRDRF 457

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|Q05D32 CTDSPL2 "CTD small phosphatase-like protein 2" [Homo sapiens (taxid:9606)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 94/210 (44%), Positives = 139/210 (66%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   251 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 307

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   308 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 367

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDP 282
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D 
Sbjct:   368 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDK 427

Query:   283 SDSALLSLLMFLETLVGA-DDVRPIIKQKY 311
             +D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct:   428 NDNELLKLIPFLEKLVELNEDVRPHIRDRF 457

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

MGI|MGI:1196405 Ctdspl2 "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2" [Mus musculus (taxid:10090)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 94/210 (44%), Positives = 139/210 (66%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   250 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 306

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   307 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 366

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDP 282
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D 
Sbjct:   367 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDK 426

Query:   283 SDSALLSLLMFLETLVGA-DDVRPIIKQKY 311
             +D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct:   427 NDNELLKLIPFLEKLVELNEDVRPHIRDRF 456

GO:0003674 "molecular_function" evidence=ND

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

RGD|1309219 Ctdspl2 "CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2" [Rattus norvegicus (taxid:10116)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 94/210 (44%), Positives = 139/210 (66%)

Query:   105 DEEYYNPYLYFMGWQNLPQIAPSYWPRTP-LREPIAGLP-ITLVLDLDETLVHSSFDNCK 162
             D E ++PY YF+  +++P +      R P L       P  +LVLDLDETLVH S +  +
Sbjct:   250 DWEVFDPY-YFI--KHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELE 306

Query:   163 DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ 222
             DA  +FP+  +  +  V+VR RP+   FLE ++ M+++++FTA + +YA +LL+ILDP +
Sbjct:   307 DAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKK 366

Query:   223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDP 282
              L+  R++R+ CV   G Y+KDL ILGRDL++  I+DN+PQ F  Q+ NGIPIESWF D 
Sbjct:   367 QLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDK 426

Query:   283 SDSALLSLLMFLETLVGA-DDVRPIIKQKY 311
             +D+ LL L+ FLE LV   +DVRP I+ ++
Sbjct:   427 NDNELLKLIPFLEKLVELNEDVRPHIRDRF 456

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	0.691
3rd Layer	3.1.3.16	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	315
TIGR02251	162	TIGR02251, HIF-SF_euk, Dullard-like phosphatase do	4e-69
pfam03031	153	pfam03031, NIF, NLI interacting factor-like phosph	8e-63
smart00577	148	smart00577, CPDc, catalytic domain of ctd-like pho	1e-56
COG5190	390	COG5190, FCP1, TFIIF-interacting CTD phosphatases,	8e-38
TIGR02250	156	TIGR02250, FCP1_euk, FCP1-like phosphatase, phosph	9e-17

>gnl|CDD|233801 TIGR02251, HIF-SF_euk, Dullard-like phosphatase domain

 Score =  212 bits (541), Expect = 4e-69
 Identities = 83/160 (51%), Positives = 118/160 (73%), Gaps = 1/160 (0%)

Query: 144 TLVLDLDETLVHSSFDNCK-DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           TLVLDLDETLVHS+F   K DADF  P+    ++  V+V +RP++  FLE V+  +++VI
Sbjct: 3   TLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVI 62

Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA    YA  +LDILD    +I +R+YR+SCVF +G+Y+KDL+++G+DL+++ I+DN+P
Sbjct: 63  FTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSP 122

Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADD 302
             + LQ DN IPI+SWFGDP+D+ LL+L+ FLE L   DD
Sbjct: 123 YSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFEDD 162

This model represents the putative phosphatase domain of a family of eukaryotic proteins including "Dullard" , and the NLI interacting factor (NIF)-like phosphatases. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDNxPxxa) and aparrently lacking the last aspartate. This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the pfam03031. Length = 162

>gnl|CDD|217328 pfam03031, NIF, NLI interacting factor-like phosphatase

 Score =  195 bits (498), Expect = 8e-63
 Identities = 81/162 (50%), Positives = 106/162 (65%), Gaps = 9/162 (5%)

Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
            TLVLDLDETLVHSSF+     DF            V+V++RP L  FL+ ++  +++VI
Sbjct: 1   KTLVLDLDETLVHSSFEPDLPFDFVLNF-----NHGVYVKKRPGLDEFLQELSKYYEIVI 55

Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA    YA  +LD LDP +     R+YR+SC F    Y+KDL++LGRDL+R+ IVDN+P
Sbjct: 56  FTASSKEYADPVLDKLDPKKKYFKHRLYRESCTF----YVKDLSLLGRDLSRVVIVDNSP 111

Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVR 304
           + F LQ DNGIPI  ++GDP D+ LL LL FL+ L   DDVR
Sbjct: 112 RSFLLQPDNGIPIPPFYGDPDDTELLKLLPFLKELAKVDDVR 153

This family contains a number of NLI interacting factor isoforms and also an N-terminal regions of RNA polymerase II CTC phosphatase and FCP1 serine phosphatase. This region has been identified as the minimal phosphatase domain. Length = 153

>gnl|CDD|214729 smart00577, CPDc, catalytic domain of ctd-like phosphatases

 Score =  179 bits (456), Expect = 1e-56
 Identities = 64/146 (43%), Positives = 98/146 (67%), Gaps = 3/146 (2%)

Query: 142 PITLVLDLDETLVHSSFDNCKD---ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMF 198
             TLVLDLDETLVHS+  + K+    DF  P+        V+V++RP +  FL+  + +F
Sbjct: 2   KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELF 61

Query: 199 DVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIV 258
           ++V+FTAG  +YA  +LD+LDP +    +R++RD CVF  G+Y+KDL++L RDL+++ I+
Sbjct: 62  ELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLNRDLSKVIII 121

Query: 259 DNTPQVFQLQVDNGIPIESWFGDPSD 284
           D++P  +    +N IPI+ WFGDP D
Sbjct: 122 DDSPDSWPFHPENLIPIKPWFGDPDD 147

Length = 148

>gnl|CDD|227517 COG5190, FCP1, TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

 Score =  137 bits (348), Expect = 8e-38
 Identities = 67/156 (42%), Positives = 94/156 (60%), Gaps = 1/156 (0%)

Query: 142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV 201
             TLVLDLDETLVHSSF      DF   +   +    V+V +RP L  FL  ++ + ++V
Sbjct: 212 KKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELV 271

Query: 202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNT 261
            FTA    YA  +LDILD ++     R++R+SCV   G Y+KD++ +GR L ++ I+DN+
Sbjct: 272 YFTASVKRYADPVLDILDSDKV-FSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNS 330

Query: 262 PQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETL 297
           P  ++   +N IPIE W  D  D  LL+LL FLE L
Sbjct: 331 PASYEFHPENAIPIEKWISDEHDDELLNLLPFLEDL 366

Length = 390

>gnl|CDD|131304 TIGR02250, FCP1_euk, FCP1-like phosphatase, phosphatase domain

 Score = 75.8 bits (187), Expect = 9e-17
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 15/149 (10%)

Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSK------------MEVQTVFVRQRPYLHMFL 191
            LVLDLD+TL+H++ D        + I               +       + RP+LH FL
Sbjct: 8   HLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFL 67

Query: 192 EAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTILGR 250
           +  + ++++ ++T G   YA  +  ++DP+    G R+  RD       + L  L     
Sbjct: 68  KEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSPHTKSLLRL--FPA 125

Query: 251 DLARIAIVDNTPQVFQLQVDNGIPIESWF 279
           D + + I+D+   V+     N I IE + 
Sbjct: 126 DESMVVIIDDREDVWPWHKRNLIQIEPYN 154

This model represents the phosphatase domain of the humanRNA polymerase II subunit A C-terminal domain phosphatase (FCP1, ) and closely related phosphatases from eukaryotes including plants, fungi and slime mold. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDDppphW). This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3.This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the pfam03031. Length = 156

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	315
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	100.0
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	100.0
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	100.0
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	100.0
KOG2832	393	consensus TFIIF-interacting CTD phosphatase, inclu	100.0
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	99.98
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	99.96
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.96
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	99.75
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	98.92
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.73
PRK13288	214	pyrophosphatase PpaX; Provisional	98.68
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	98.66
PRK14988	224	GMP/IMP nucleotidase; Provisional	98.59
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	98.55
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.53
PRK11587	218	putative phosphatase; Provisional	98.52
PRK13226	229	phosphoglycolate phosphatase; Provisional	98.52
COG4996	164	Predicted phosphatase [General function prediction	98.51
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	98.5
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.49
PRK13225	273	phosphoglycolate phosphatase; Provisional	98.49
PLN02575	381	haloacid dehalogenase-like hydrolase	98.48
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	98.48
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.45
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.42
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	98.38
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	98.34
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.34
PRK13223	272	phosphoglycolate phosphatase; Provisional	98.33
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.3
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.29
PLN02940	382	riboflavin kinase	98.27
PRK10563	221	6-phosphogluconate phosphatase; Provisional	98.26
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.26
PHA02597	197	30.2 hypothetical protein; Provisional	98.24
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	98.23
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.2
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	98.19
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	98.17
PHA02530	300	pseT polynucleotide kinase; Provisional	98.17
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.12
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.09
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.03
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.02
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	97.96
COG0546	220	Gph Predicted phosphatases [General function predi	97.94
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	97.91
PRK06769	173	hypothetical protein; Validated	97.9
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	97.87
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	97.86
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	97.82
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	97.8
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	97.78
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.76
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	97.76
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	97.7
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	97.68
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	97.65
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	97.65
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.63
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	97.62
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.62
PRK09449	224	dUMP phosphatase; Provisional	97.6
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	97.59
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	97.58
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	97.53
PLN02954	224	phosphoserine phosphatase	97.52
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	97.5
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	97.4
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	97.34
PRK13222	226	phosphoglycolate phosphatase; Provisional	97.34
PRK11133	322	serB phosphoserine phosphatase; Provisional	97.3
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	97.27
PRK08238	479	hypothetical protein; Validated	97.27
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	97.23
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	97.22
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	97.2
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	97.19
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.18
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	97.17
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.17
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	97.1
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.06
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	97.04
PLN02811	220	hydrolase	96.99
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	96.89
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	96.81
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	96.61
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	96.58
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	96.57
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.48
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	96.42
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	96.24
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.22
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	96.19
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	96.12
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	96.06
COG0241	181	HisB Histidinol phosphatase and related phosphatas	96.06
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.06
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.04
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	95.99
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	95.89
PTZ00445	219	p36-lilke protein; Provisional	95.89
PRK10748	238	flavin mononucleotide phosphatase; Provisional	95.85
PRK10513	270	sugar phosphate phosphatase; Provisional	95.85
PRK01158	230	phosphoglycolate phosphatase; Provisional	95.79
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	95.73
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	95.59
PRK10976	266	putative hydrolase; Provisional	95.57
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	95.57
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	95.56
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	95.44
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	95.34
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	95.25
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	95.03
PRK10444	248	UMP phosphatase; Provisional	94.97
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	94.86
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	94.76
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	94.71
PTZ00174	247	phosphomannomutase; Provisional	94.64
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	94.59
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	94.35
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	94.28
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	94.2
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	94.18
PLN02645	311	phosphoglycolate phosphatase	94.18
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	94.11
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	93.95
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	93.8
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	93.78
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	93.74
PLN02423	245	phosphomannomutase	93.51
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	93.38
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	93.13
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	92.94
PLN02887	580	hydrolase family protein	92.94
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	92.19
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	92.05
COG4359	220	Uncharacterized conserved protein [Function unknow	91.61
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	91.04
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	89.84
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	89.77
PLN02151	354	trehalose-phosphatase	89.47
PLN02580	384	trehalose-phosphatase	89.06
COG2503	274	Predicted secreted acid phosphatase [General funct	88.9
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	88.72
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	88.42
PLN03017	366	trehalose-phosphatase	87.21
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	86.84
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	86.19
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	85.66
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	83.8
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	83.78
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	83.69
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	83.55
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	83.35
PRK11590	211	hypothetical protein; Provisional	82.95
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	82.67
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	82.48
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	82.46
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	82.42
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	82.28
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	82.17
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	82.05
PRK10748	238	flavin mononucleotide phosphatase; Provisional	81.51
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	81.28
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	81.24
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	80.81

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=100.00  E-value=3.7e-50  Score=374.06  Aligned_cols=185  Identities=49%  Similarity=0.866  Sum_probs=176.2

Q ss_pred             CCCCCCCCCCCCCCeEEEEeCCcceecee--cCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCC
Q 021254          129 WPRTPLREPIAGLPITLVLDLDETLVHSS--FDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAG  206 (315)
Q Consensus       129 ~~~llP~~~~~~~k~tLVLDLDeTLVhs~--~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas  206 (315)
                      ...++|......+|++||||||||||||+  .++...+++.+++.+++..+.+||.+|||+++||++++++||++||||+
T Consensus        76 ~~~~~~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs  155 (262)
T KOG1605|consen   76 LSPVLPLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTAS  155 (262)
T ss_pred             ccccCCcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhh
Confidence            34455666668999999999999999999  6777889999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCChH
Q 021254          207 QSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSA  286 (315)
Q Consensus       207 ~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~e  286 (315)
                      .+.||++|++.||+.+++|.+|+||++|...+|+|+|||+.+|+|+++||||||+|.+|++||+|||||++|++|+.|+|
T Consensus       156 ~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~e  235 (262)
T KOG1605|consen  156 LEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTE  235 (262)
T ss_pred             hHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHH
Confidence            99999999999999888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCChHHHHHhhhcC
Q 021254          287 LLSLLMFLETLVGADDVRPIIKQKYGS  313 (315)
Q Consensus       287 Ll~L~~~L~~L~~~~DVR~~l~~~f~~  313 (315)
                      |++|+|||++|+.++|||++++++|+.
T Consensus       236 LL~LlpfLe~L~~~~Dvr~~l~~~~~~  262 (262)
T KOG1605|consen  236 LLKLLPFLEALAFVDDVRPILARRFGN  262 (262)
T ss_pred             HHHHHHHHHHhcccccHHHHHHHhhcC
Confidence            999999999999999999999999874

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=100.00  E-value=3.6e-42  Score=300.27  Aligned_cols=161  Identities=52%  Similarity=0.890  Sum_probs=153.4

Q ss_pred             CeEEEEeCCcceeceecCCCC-CCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCK-DADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~-~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      |+||||||||||||++..+.. .+++.+.+..++....+||++|||+.+||++|+++|+|+|||++.+.||++++++|||
T Consensus         1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp   80 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR   80 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence            689999999999999987765 6788888887888889999999999999999999999999999999999999999999


Q ss_pred             CCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCChHHHHHHHHHhhccCC
Q 021254          221 NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGA  300 (315)
Q Consensus       221 ~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~eLl~L~~~L~~L~~~  300 (315)
                      .+.+|++++||++|...+|.|.|||+.+|+++++||+|||+|..|..|++|||+|.+|.|+.+|++|++|++||+.|+.+
T Consensus        81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~  160 (162)
T TIGR02251        81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE  160 (162)
T ss_pred             CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence            98899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CC
Q 021254          301 DD  302 (315)
Q Consensus       301 ~D  302 (315)
                      +|
T Consensus       161 ~~  162 (162)
T TIGR02251       161 DD  162 (162)
T ss_pred             CC
Confidence            76

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=100.00  E-value=4.8e-40  Score=283.04  Aligned_cols=158  Identities=50%  Similarity=0.818  Sum_probs=130.5

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ  222 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~  222 (315)
                      |+|||||||||||+...+....++...    .....++|++|||+++||++|+++|+|+|||++++.||++|++.|+|.+
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~----~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~   76 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKII----DQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG   76 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEE----TEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred             CEEEEeCCCcEEEEeecCCCCccccee----ccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence            689999999999998765543333222    2567789999999999999999999999999999999999999999988


Q ss_pred             CeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCC-CCChHHHHHHHHHhhccCCC
Q 021254          223 TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGD-PSDSALLSLLMFLETLVGAD  301 (315)
Q Consensus       223 ~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d-~~D~eLl~L~~~L~~L~~~~  301 (315)
                      .+|.++++|++|...+|.+.|||+.+|+++++||+|||+|.+|..+++|+|+|++|.++ ..|++|.+|++||++|+.++
T Consensus        77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~  156 (159)
T PF03031_consen   77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED  156 (159)
T ss_dssp             SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred             cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence            89999999999999888889999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             ChH
Q 021254          302 DVR  304 (315)
Q Consensus       302 DVR  304 (315)
                      |||
T Consensus       157 Dvr  159 (159)
T PF03031_consen  157 DVR  159 (159)
T ss_dssp             -CH
T ss_pred             CCC
Confidence            998

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=100.00  E-value=3e-38  Score=283.72  Aligned_cols=158  Identities=23%  Similarity=0.309  Sum_probs=136.3

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHh
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      ..+|++|||||||||||+....                .++++.+|||+++||++|+++|||+||||+++.||+.+++.|
T Consensus        18 ~~~kklLVLDLDeTLvh~~~~~----------------~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l   81 (195)
T TIGR02245        18 REGKKLLVLDIDYTLFDHRSPA----------------ETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL   81 (195)
T ss_pred             CCCCcEEEEeCCCceEcccccC----------------CCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh
Confidence            5788999999999999974321                145788999999999999999999999999999999999999


Q ss_pred             CCCC-CeeeeEEEecceee------eCCc-cccccccc------CCCCCcEEEEECCchhhccCCCCeeeeccccC----
Q 021254          219 DPNQ-TLIGQRVYRDSCVF------ADGE-YLKDLTIL------GRDLARIAIVDNTPQVFQLQVDNGIPIESWFG----  280 (315)
Q Consensus       219 Dp~~-~~f~~rl~Re~C~~------~~g~-y~KDL~~L------grdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~----  280 (315)
                      ++.. .-+..++++++|.+      ..|. ++|||+.+      ++++++||||||+|.++.+||+|||+|++|++    
T Consensus        82 ~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~  161 (195)
T TIGR02245        82 GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHAN  161 (195)
T ss_pred             cccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCC
Confidence            7643 23556667788842      3455 59999987      34889999999999999999999999999995    


Q ss_pred             CCCChHHHHHHHHHhhccCCCChHHHHHhhhc
Q 021254          281 DPSDSALLSLLMFLETLVGADDVRPIIKQKYG  312 (315)
Q Consensus       281 d~~D~eLl~L~~~L~~L~~~~DVR~~l~~~f~  312 (315)
                      +..|++|++|+|||+.|+.++|||++.+++|.
T Consensus       162 ~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~  193 (195)
T TIGR02245       162 RGTDQELLKLTQYLKTIAELEDFSSLDHKEWE  193 (195)
T ss_pred             CcccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence            57999999999999999999999999999885

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=100.00  E-value=2.9e-33  Score=267.16  Aligned_cols=169  Identities=31%  Similarity=0.601  Sum_probs=155.8

Q ss_pred             CCCCCCCCCCCC--C-CCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEE
Q 021254          125 APSYWPRTPLRE--P-IAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV  201 (315)
Q Consensus       125 ~~~~~~~llP~~--~-~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIv  201 (315)
                      .++..+.|+|+.  + ..++++||||+|.++|||..|.               ...++.+++|||++.||..++++||||
T Consensus       169 ~EP~~~~LLPdpl~pPy~Qp~yTLVleledvLVhpdws---------------~~tGwRf~kRPgvD~FL~~~a~~yEIV  233 (393)
T KOG2832|consen  169 KEPDRAKLLPDPLPPPYEQPPYTLVLELEDVLVHPDWS---------------YKTGWRFKKRPGVDYFLGHLAKYYEIV  233 (393)
T ss_pred             cCCchhhhCCCCCCCcccCCCceEEEEeeeeEeccchh---------------hhcCceeccCchHHHHHHhhcccceEE
Confidence            455667777763  3 3499999999999999999774               235778999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCC
Q 021254          202 IFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGD  281 (315)
Q Consensus       202 IfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d  281 (315)
                      |||+.+..||.+|++.|||+| +|+++|+|++|.+.+|.++|||+.|+||+++||+||-.+.++..||+|+|++++|.|+
T Consensus       234 i~sse~gmt~~pl~d~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn  312 (393)
T KOG2832|consen  234 VYSSEQGMTVFPLLDALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGN  312 (393)
T ss_pred             EEecCCccchhhhHhhcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCC
Confidence            999999999999999999997 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHhhccC--CCChHHHHHh
Q 021254          282 PSDSALLSLLMFLETLVG--ADDVRPIIKQ  309 (315)
Q Consensus       282 ~~D~eLl~L~~~L~~L~~--~~DVR~~l~~  309 (315)
                      .+|+.|++|++||+.|+.  ++|||++|+.
T Consensus       313 ~dDt~L~dL~~FL~~ia~~~~eDvR~vL~~  342 (393)
T KOG2832|consen  313 DDDTSLFDLLAFLEYIAQQQVEDVRPVLQS  342 (393)
T ss_pred             cccchhhhHHHHHHHHHHccHHHHHHHHHH
Confidence            999999999999999885  5799999985

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=99.98  E-value=4.9e-32  Score=235.67  Aligned_cols=138  Identities=26%  Similarity=0.457  Sum_probs=116.5

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCcee------------eeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCC
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSF------------PIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAG  206 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~------------~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas  206 (315)
                      .++|++||||||+|||||+..+........            ...+.......++++|||+.+||++|++.|+++|||++
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~   82 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG   82 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence            478999999999999999876543221110            01122224668999999999999999999999999999


Q ss_pred             chhhHHHHHHHhCCCCCeeeeE-EEecceeeeCCccccccc-ccCCCCCcEEEEECCchhhccCCCCeeeecccc
Q 021254          207 QSIYAGQLLDILDPNQTLIGQR-VYRDSCVFADGEYLKDLT-ILGRDLARIAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       207 ~~~YA~~vL~~LDp~~~~f~~r-l~Re~C~~~~g~y~KDL~-~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      .+.||+++++.|||.+.+|.++ ++|++|.   |.+.|||+ .+|++++++|||||+|.+|..||+|+|+|++|.
T Consensus        83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~  154 (156)
T TIGR02250        83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN  154 (156)
T ss_pred             cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence            9999999999999998899665 5799995   78999995 569999999999999999999999999999995

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.96  E-value=3.3e-29  Score=244.20  Aligned_cols=173  Identities=40%  Similarity=0.697  Sum_probs=164.4

Q ss_pred             CCCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHH
Q 021254          137 PIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       137 ~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~  216 (315)
                      ....++++|++|||+||+||....+...+|...+...+..+.+||.+||++++||..++++|++++||++.+.||++|++
T Consensus       207 ~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~d  286 (390)
T COG5190         207 KSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLD  286 (390)
T ss_pred             cCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchHHH
Confidence            34588999999999999999988888888888888888889999999999999999999999999999999999999999


Q ss_pred             HhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCChHHHHHHHHHhh
Q 021254          217 ILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLET  296 (315)
Q Consensus       217 ~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~eLl~L~~~L~~  296 (315)
                      .|++.+ .|.+++||++|....|.|+|||..+||++.+|||||++|.+|.++|+|+|+|++|.+++.|.+|++|+++|+.
T Consensus       287 ~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~le~  365 (390)
T COG5190         287 ILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFLED  365 (390)
T ss_pred             hccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhcccccc
Confidence            999998 8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccC--CCChHHHHHhh
Q 021254          297 LVG--ADDVRPIIKQK  310 (315)
Q Consensus       297 L~~--~~DVR~~l~~~  310 (315)
                      |..  ..||+..+..+
T Consensus       366 L~~~~~~d~~~~l~~~  381 (390)
T COG5190         366 LPDRDLKDVSSILQSR  381 (390)
T ss_pred             cccccchhhhhhhhhh
Confidence            998  77999988754

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.96  E-value=4.3e-28  Score=207.94  Aligned_cols=145  Identities=44%  Similarity=0.853  Sum_probs=130.5

Q ss_pred             CCeEEEEeCCcceeceecCC---CCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHH
Q 021254          141 LPITLVLDLDETLVHSSFDN---CKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~---~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      +|++|||||||||+|+....   ....++...+.+.+....+++++|||+.+||++|++.|+++|||++.+.||+.++++
T Consensus         1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~   80 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL   80 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence            58999999999999996422   223445566667788889999999999999999999999999999999999999999


Q ss_pred             hCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCCh
Q 021254          218 LDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDS  285 (315)
Q Consensus       218 LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~  285 (315)
                      +++.+.+|..++++++|...++.|.|+|+.+|++++++|+|||++..|..++.|||.|++|.++.+|+
T Consensus        81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~  148 (148)
T smart00577       81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT  148 (148)
T ss_pred             hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence            99976567999999999998888999999999999999999999999999999999999999999884

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.75  E-value=2.5e-18  Score=176.35  Aligned_cols=137  Identities=26%  Similarity=0.420  Sum_probs=107.0

Q ss_pred             CCCeEEEEeCCcceeceecCCCC--------CCCc-------eeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEc
Q 021254          140 GLPITLVLDLDETLVHSSFDNCK--------DADF-------SFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT  204 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~--------~~d~-------~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfT  204 (315)
                      ++++.||+|||.||+|+...+.-        +...       .+.+...+....+||++||++++||++++++||++|||
T Consensus       144 ~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT  223 (635)
T KOG0323|consen  144 RKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT  223 (635)
T ss_pred             hhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence            44469999999999999863221        0000       01111113344689999999999999999999999999


Q ss_pred             CCchhhHHHHHHHhCCCCCeeeeEEE-ecceeeeCCccccccccc-CCCCCcEEEEECCchhhccCCCCeeeecccc
Q 021254          205 AGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       205 as~~~YA~~vL~~LDp~~~~f~~rl~-Re~C~~~~g~y~KDL~~L-grdl~~vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      .|.+.||..|++.|||.++||++|++ |+.   ....-.+||..+ .++.+++|||||+..+|..++.|.|.|.+|.
T Consensus       224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~  297 (635)
T KOG0323|consen  224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP  297 (635)
T ss_pred             ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence            99999999999999999999998876 666   122335666666 5677889999999999999999999999983

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=98.92  E-value=4e-09  Score=93.62  Aligned_cols=137  Identities=14%  Similarity=0.046  Sum_probs=94.4

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecC---eeeeeeEeeCchHHHHHHHhh-cccEEEEEcCC-chhhHHHHHHH
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKM---EVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAG-QSIYAGQLLDI  217 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~---~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas-~~~YA~~vL~~  217 (315)
                      ..+|||||+||+.......-+..+.-.-...+   .....-+.++||+.++|+.|. +.+.+.|.|++ ...++..+++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~   82 (174)
T TIGR01685         3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT   82 (174)
T ss_pred             cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence            47899999999987653332222210000111   112334778999999999998 67999999998 99999999999


Q ss_pred             hCCC--C------CeeeeEEEecceeeeCC--ccccccccc---CCCCCcEEEEECCchhhccCCCCeeeecccc
Q 021254          218 LDPN--Q------TLIGQRVYRDSCVFADG--EYLKDLTIL---GRDLARIAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       218 LDp~--~------~~f~~rl~Re~C~~~~g--~y~KDL~~L---grdl~~vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      ++..  +      .+|+.++..+.....+.  ...+.+...   |.+++++++|||++........+|+.+....
T Consensus        83 ~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~  157 (174)
T TIGR01685        83 FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCP  157 (174)
T ss_pred             CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcC
Confidence            9865  1      37888777554211111  112223222   5889999999999999888889999887663

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.73  E-value=6.7e-09  Score=87.09  Aligned_cols=111  Identities=16%  Similarity=0.079  Sum_probs=77.3

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCC-chhhHHHHHHHhCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAG-QSIYAGQLLDILDP  220 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas-~~~YA~~vL~~LDp  220 (315)
                      +.+|+||||||+..-..... .+-.+.+       .   ...||+.++|++++ +.+.++|.|++ .+.++..+++...+
T Consensus         1 kli~~DlD~Tl~~~~~~~~~-~~~~~~~-------~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~   69 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVG-EDPIIDL-------E---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED   69 (128)
T ss_pred             CEEEEeCCCCCCCCCccccc-CCcchhh-------H---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence            46899999999987321000 0000000       0   46899999999998 57999999999 89999999998762


Q ss_pred             ------CCCeeeeEEEecceeeeCCcccccccccC--CCCCcEEEEECCchhh
Q 021254          221 ------NQTLIGQRVYRDSCVFADGEYLKDLTILG--RDLARIAIVDNTPQVF  265 (315)
Q Consensus       221 ------~~~~f~~rl~Re~C~~~~g~y~KDL~~Lg--rdl~~vIIIDDsp~~~  265 (315)
                            -..+|......+... ....+.+-+..+|  ..++++++|||++...
T Consensus        70 ~~~i~~l~~~f~~~~~~~~~p-kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~  121 (128)
T TIGR01681        70 FGIIFPLAEYFDPLTIGYWLP-KSPRLVEIALKLNGVLKPKSILFVDDRPDNN  121 (128)
T ss_pred             cccchhhHhhhhhhhhcCCCc-HHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence                  122565555443311 1123677778889  9999999999998753

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=98.68  E-value=9.8e-09  Score=91.95  Aligned_cols=96  Identities=15%  Similarity=0.124  Sum_probs=81.9

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|++|+ +.+.++|.|++.+.++..+++.++-.. +|+..+..+++...+.   .|.+-++.+|.++++++
T Consensus        81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~  159 (214)
T PRK13288         81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL  159 (214)
T ss_pred             cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence            567899999999998 579999999999999999999998876 8999888777655443   46777888899999999


Q ss_pred             EEECCchhhccCCCCeeeecc
Q 021254          257 IVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~  277 (315)
                      +|+|++.-+.....+|++.-.
T Consensus       160 ~iGDs~~Di~aa~~aG~~~i~  180 (214)
T PRK13288        160 MVGDNHHDILAGKNAGTKTAG  180 (214)
T ss_pred             EECCCHHHHHHHHHCCCeEEE
Confidence            999999888777788887654

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=98.66  E-value=1.3e-08  Score=95.34  Aligned_cols=98  Identities=11%  Similarity=0.126  Sum_probs=84.5

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.|+ ..+.++|.|++...++..+++.++... +|+.++..+.+...+.   .|.+-+..+|.++++++
T Consensus       108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l  186 (260)
T PLN03243        108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI  186 (260)
T ss_pred             cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence            557899999999999 579999999999999999999998776 8999999888765554   37888899999999999


Q ss_pred             EEECCchhhccCCCCeeeecccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      +|+|++.-.......|+.+....
T Consensus       187 ~IgDs~~Di~aA~~aG~~~i~v~  209 (260)
T PLN03243        187 VFGNSNSSVEAAHDGCMKCVAVA  209 (260)
T ss_pred             EEcCCHHHHHHHHHcCCEEEEEe
Confidence            99999998877778888765443

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=98.59  E-value=1.9e-08  Score=91.82  Aligned_cols=93  Identities=14%  Similarity=0.120  Sum_probs=79.5

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.|. +.+.++|-|++.+.++...++.++... +|+.++..++....+.   .|.+-+..+|.++++++
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  170 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL  170 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence            567899999999999 579999999999999999999987765 7998887776554444   37788889999999999


Q ss_pred             EEECCchhhccCCCCeee
Q 021254          257 IVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~  274 (315)
                      +|+|++........+|+.
T Consensus       171 ~igDs~~di~aA~~aG~~  188 (224)
T PRK14988        171 FIDDSEPILDAAAQFGIR  188 (224)
T ss_pred             EEcCCHHHHHHHHHcCCe
Confidence            999999988777788886

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=98.55  E-value=3.3e-08  Score=86.54  Aligned_cols=92  Identities=21%  Similarity=0.219  Sum_probs=74.9

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceee----eCC---cccccccccCCCCC
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF----ADG---EYLKDLTILGRDLA  253 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~----~~g---~y~KDL~~Lgrdl~  253 (315)
                      +...||+.++|++|+  +.++|.|++...++..+++.++... +|+.++..++...    .+.   .|.+-+..+|.+++
T Consensus        83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  159 (184)
T TIGR01993        83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE  159 (184)
T ss_pred             CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence            446799999999998  6899999999999999999998765 8998888766443    132   47777888999999


Q ss_pred             cEEEEECCchhhccCCCCeeee
Q 021254          254 RIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      ++++|+|++.........|+..
T Consensus       160 ~~l~vgD~~~di~aA~~~G~~~  181 (184)
T TIGR01993       160 RAIFFDDSARNIAAAKALGMKT  181 (184)
T ss_pred             ceEEEeCCHHHHHHHHHcCCEE
Confidence            9999999998776666666653

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.53  E-value=5.1e-08  Score=84.01  Aligned_cols=92  Identities=18%  Similarity=0.225  Sum_probs=73.9

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|++++ ..+.++|.|++...+ ..++..++..+ +|...++.+++...+.   .|.+-++.+|.++++++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  161 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL  161 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence            567899999999998 579999999999998 66766677765 7988888776655553   36777788899999999


Q ss_pred             EEECCchhhccCCCCeee
Q 021254          257 IVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~  274 (315)
                      +|+|++.........|+.
T Consensus       162 ~vgD~~~di~aA~~~G~~  179 (183)
T TIGR01509       162 FVDDSPAGIEAAKAAGMH  179 (183)
T ss_pred             EEcCCHHHHHHHHHcCCE
Confidence            999999876555556654

HAD subfamilies caused by an overly broad single model.

>PRK11587 putative phosphatase; Provisional

Probab=98.52  E-value=7.4e-08  Score=86.87  Aligned_cols=97  Identities=14%  Similarity=0.076  Sum_probs=78.0

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.|. +.+.++|-|++...++..+++.....  +|...+..+++...++   .|.+-+..+|..++++|
T Consensus        82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l  159 (218)
T PRK11587         82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV  159 (218)
T ss_pred             ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence            567899999999998 67999999999999888888877653  4666666666554444   37888889999999999


Q ss_pred             EEECCchhhccCCCCeeeecccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      +|+|++.-.......|+..-.+.
T Consensus       160 ~igDs~~di~aA~~aG~~~i~v~  182 (218)
T PRK11587        160 VVEDAPAGVLSGLAAGCHVIAVN  182 (218)
T ss_pred             EEecchhhhHHHHHCCCEEEEEC
Confidence            99999988777777887755443

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=98.52  E-value=6.6e-08  Score=88.15  Aligned_cols=96  Identities=14%  Similarity=-0.001  Sum_probs=78.7

Q ss_pred             eEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcE
Q 021254          180 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI  255 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~v  255 (315)
                      .+...||+.++|++|+ +.+.++|-|++...++..+++.++... +|...+..+++...+.   .|.+-++.+|.+++++
T Consensus        93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~  171 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC  171 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence            3678999999999998 569999999999999999999998765 7887777676554443   3778888899999999


Q ss_pred             EEEECCchhhccCCCCeeeec
Q 021254          256 AIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I~  276 (315)
                      ++|+|++.-.......|+..-
T Consensus       172 l~IGDs~~Di~aA~~aG~~~i  192 (229)
T PRK13226        172 VYVGDDERDILAARAAGMPSV  192 (229)
T ss_pred             EEeCCCHHHHHHHHHCCCcEE
Confidence            999999987766666677654

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.51  E-value=4.5e-07  Score=77.13  Aligned_cols=137  Identities=18%  Similarity=0.058  Sum_probs=97.8

Q ss_pred             EEEEeCCcceeceecCCCCCCCceeeeeecC--eeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKM--EVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~--~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+|||+|+||++.-....-.+.|+- +..+.  ...+.-|.++|++.+||+++. ..|-+..+|.....-|-++|.++|.
T Consensus         2 ~i~~d~d~t~wdhh~iSsl~pPf~r-Vs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~   80 (164)
T COG4996           2 AIVFDADKTLWDHHNISSLEPPFRR-VSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDL   80 (164)
T ss_pred             cEEEeCCCcccccccchhcCCccee-cCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhch
Confidence            5799999999986432222222221 11111  234566899999999999999 6899999999999999999999999


Q ss_pred             CCCeeeeEEEecceeeeCCccccccccc------CCCCCcEEEEECCchhh---ccCCCCeeeeccccCCCC
Q 021254          221 NQTLIGQRVYRDSCVFADGEYLKDLTIL------GRDLARIAIVDNTPQVF---QLQVDNGIPIESWFGDPS  283 (315)
Q Consensus       221 ~~~~f~~rl~Re~C~~~~g~y~KDL~~L------grdl~~vIIIDDsp~~~---~~q~~NgI~I~~f~~d~~  283 (315)
                      .. ||.+.+...| .+..-+..+-|..+      ...++++|.+||+...+   +....|.=+++.|.+-+.
T Consensus        81 ~~-yFhy~ViePh-P~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c  150 (164)
T COG4996          81 LQ-YFHYIVIEPH-PYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISC  150 (164)
T ss_pred             hh-hEEEEEecCC-ChhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHH
Confidence            87 8988777655 11111222333332      45788999999998866   457889999999986643

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=98.50  E-value=2e-08  Score=87.61  Aligned_cols=95  Identities=16%  Similarity=0.174  Sum_probs=79.0

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      +..-|++ +.|+.+.+.+.++|-|++...+++.+++.++-.+ +|+.++..+++...+..   |..-++++|.+++++|+
T Consensus        87 ~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  164 (188)
T PRK10725         87 VEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV  164 (188)
T ss_pred             CCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            3455764 8999998778999999999999999999998875 89999998887665553   67888889999999999


Q ss_pred             EECCchhhccCCCCeeeecc
Q 021254          258 VDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~  277 (315)
                      |+|++.-+.....+|++.-.
T Consensus       165 igDs~~di~aA~~aG~~~i~  184 (188)
T PRK10725        165 FEDADFGIQAARAAGMDAVD  184 (188)
T ss_pred             EeccHhhHHHHHHCCCEEEe
Confidence            99999888777777776543

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.49  E-value=1.7e-07  Score=77.86  Aligned_cols=115  Identities=23%  Similarity=0.173  Sum_probs=79.6

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc--------hhhHHH
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ--------SIYAGQ  213 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~--------~~YA~~  213 (315)
                      +.++||+||||++...  ...             ........|++.++|++|. +.+.++|.|++.        ..++..
T Consensus         1 k~~~~D~dgtL~~~~~--~~~-------------~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~   65 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVP--YVD-------------DEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR   65 (132)
T ss_pred             CEEEEeCCCceecCCC--CCC-------------CHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence            4689999999996411  000             0012346899999999998 679999999999        888999


Q ss_pred             HHHHhCCCCCeeeeEEEecceee-eCCccccccccc-CCCCCcEEEEEC-CchhhccCCCCeeee
Q 021254          214 LLDILDPNQTLIGQRVYRDSCVF-ADGEYLKDLTIL-GRDLARIAIVDN-TPQVFQLQVDNGIPI  275 (315)
Q Consensus       214 vL~~LDp~~~~f~~rl~Re~C~~-~~g~y~KDL~~L-grdl~~vIIIDD-sp~~~~~q~~NgI~I  275 (315)
                      +++.++..   +...++...+.. ....|.+-++.+ +.+++++++|+| +..-......+|+..
T Consensus        66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~  127 (132)
T TIGR01662        66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF  127 (132)
T ss_pred             HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence            99998764   222233331111 112466777888 599999999999 676665555666543

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=98.49  E-value=4.4e-08  Score=92.44  Aligned_cols=96  Identities=9%  Similarity=0.030  Sum_probs=74.5

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVD  259 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIID  259 (315)
                      +...||+.++|++|. +.+.++|.|++...++..+++.++... +|..++..+........+.+-+..+|.+++++++|+
T Consensus       141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG  219 (273)
T PRK13225        141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG  219 (273)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence            456799999999998 679999999999999999999998865 788766544322111234555667788999999999


Q ss_pred             CCchhhccCCCCeeeecc
Q 021254          260 NTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       260 Dsp~~~~~q~~NgI~I~~  277 (315)
                      |++.-.......|+....
T Consensus       220 Ds~~Di~aA~~AG~~~I~  237 (273)
T PRK13225        220 DETRDVEAARQVGLIAVA  237 (273)
T ss_pred             CCHHHHHHHHHCCCeEEE
Confidence            999877666667777643

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=98.48  E-value=4.4e-08  Score=96.71  Aligned_cols=98  Identities=9%  Similarity=0.057  Sum_probs=84.3

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.+||+.|. +.+.++|-|++...+++.+++.++..+ ||+.++..+++...+.   .|.+-+..+|.+++++|
T Consensus       215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl  293 (381)
T PLN02575        215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI  293 (381)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            456799999999998 679999999999999999999998876 8999999888765554   47888899999999999


Q ss_pred             EEECCchhhccCCCCeeeecccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      +|+|++.........|+......
T Consensus       294 ~IGDS~~DIeAAk~AGm~~IgV~  316 (381)
T PLN02575        294 VFGNSNQTVEAAHDARMKCVAVA  316 (381)
T ss_pred             EEcCCHHHHHHHHHcCCEEEEEC
Confidence            99999998877777777665553

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=98.48  E-value=3.6e-08  Score=90.05  Aligned_cols=99  Identities=17%  Similarity=0.194  Sum_probs=88.3

Q ss_pred             EeeCchHHHHHHHhhcc-cEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~-fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.+||+.|.+. ..+++-|++.+..+..+++.++..+ +|..+++.++....+..   |++-+..||.++++||
T Consensus        85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv  163 (221)
T COG0637          85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV  163 (221)
T ss_pred             CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence            67899999999999965 9999999999999999999999886 89999999888777653   8999999999999999


Q ss_pred             EEECCchhhccCCCCeeeeccccC
Q 021254          257 IVDNTPQVFQLQVDNGIPIESWFG  280 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f~~  280 (315)
                      +|+|++.-......-|+.+-.+.+
T Consensus       164 viEDs~~Gi~Aa~aAGm~vv~v~~  187 (221)
T COG0637         164 VVEDSPAGIQAAKAAGMRVVGVPA  187 (221)
T ss_pred             EEecchhHHHHHHHCCCEEEEecC
Confidence            999999988777777887777765

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.45  E-value=2e-06  Score=82.22  Aligned_cols=127  Identities=18%  Similarity=0.161  Sum_probs=92.4

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeC-chHHHHHHHhh-cccEEEEEcCCchhhHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR-PYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lR-P~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~  216 (315)
                      ...++.+|+||||||+.....                     |..| |++.++|++|+ +++.++|+|++.++++..+++
T Consensus       125 ~~~~~~i~~D~D~TL~~~~~~---------------------v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le  183 (303)
T PHA03398        125 WEIPHVIVFDLDSTLITDEEP---------------------VRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLK  183 (303)
T ss_pred             eeeccEEEEecCCCccCCCCc---------------------cccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence            367789999999999998431                     4478 99999999999 579999999999999999999


Q ss_pred             HhCCCCCeeeeEEEecceeeeC----------------Cccccccc-----------------ccCCCCC-cEEEEECCc
Q 021254          217 ILDPNQTLIGQRVYRDSCVFAD----------------GEYLKDLT-----------------ILGRDLA-RIAIVDNTP  262 (315)
Q Consensus       217 ~LDp~~~~f~~rl~Re~C~~~~----------------g~y~KDL~-----------------~Lgrdl~-~vIIIDDsp  262 (315)
                      .++..+ +|...+..++.....                ..+..|..                 ..|...- -+.+|||-+
T Consensus       184 ~lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~  262 (303)
T PHA03398        184 ETKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK  262 (303)
T ss_pred             HcCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence            999875 787777655543322                12233333                 2344443 467899988


Q ss_pred             hhhccCCCCeeeeccccCCCCChHHH
Q 021254          263 QVFQLQVDNGIPIESWFGDPSDSALL  288 (315)
Q Consensus       263 ~~~~~q~~NgI~I~~f~~d~~D~eLl  288 (315)
                      ..= +.-+|-+.++..-...+|...-
T Consensus       263 ~Nn-~~YD~fv~v~rcp~P~~DW~~~  287 (303)
T PHA03398        263 SNN-YSYDYFVNVKRCPEPVNDWDKY  287 (303)
T ss_pred             ccC-ccceeEEEeeeCCCCcHHHHHH
Confidence            642 4568888888877666665543

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.42  E-value=2.5e-07  Score=74.12  Aligned_cols=107  Identities=17%  Similarity=0.208  Sum_probs=75.5

Q ss_pred             EEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCC
Q 021254          144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQ  222 (315)
Q Consensus       144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~  222 (315)
                      ++|||+||||+........               ...+..+|++.++|+++.+ .+.++|.|++...++..+++.+....
T Consensus         1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~   65 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD   65 (139)
T ss_pred             CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence            4799999999987532110               1235679999999999996 59999999999999999999987643


Q ss_pred             CeeeeEEEecceeee----------------CC---cccccccccCCCCCcEEEEECCchhhc
Q 021254          223 TLIGQRVYRDSCVFA----------------DG---EYLKDLTILGRDLARIAIVDNTPQVFQ  266 (315)
Q Consensus       223 ~~f~~rl~Re~C~~~----------------~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~  266 (315)
                       ++..++..+.....                ++   .+..-+..++.+++.+++|+|++.-..
T Consensus        66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~  127 (139)
T cd01427          66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIE  127 (139)
T ss_pred             -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHH
Confidence             45555543332211                11   133344455777899999999997543

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=98.38  E-value=6.8e-07  Score=78.38  Aligned_cols=115  Identities=16%  Similarity=0.091  Sum_probs=78.4

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch-------------
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS-------------  208 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~-------------  208 (315)
                      +.+.||+||||+-...       +.        ...--+.+.||+.++|++|+ +.|.++|.|++..             
T Consensus         2 ~~~~~D~Dgtl~~~~~-------~~--------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~   66 (176)
T TIGR00213         2 KAIFLDRDGTINIDHG-------YV--------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ   66 (176)
T ss_pred             CEEEEeCCCCEeCCCC-------CC--------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence            5788999999994211       10        00112446799999999999 5799999999885             


Q ss_pred             --hhHHHHHHHhCCCCCeeeeEEEec-----------ceeeeCC---cccccccccCCCCCcEEEEECCchhhccCCCCe
Q 021254          209 --IYAGQLLDILDPNQTLIGQRVYRD-----------SCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNG  272 (315)
Q Consensus       209 --~YA~~vL~~LDp~~~~f~~rl~Re-----------~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~Ng  272 (315)
                        .+...++..+...   |...++..           .|...++   .|.+-++.+|.+++++++|+|++.-......+|
T Consensus        67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG  143 (176)
T TIGR00213        67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK  143 (176)
T ss_pred             HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence              3334445444332   44444432           3333332   467788889999999999999998877777778


Q ss_pred             eee
Q 021254          273 IPI  275 (315)
Q Consensus       273 I~I  275 (315)
                      +..
T Consensus       144 ~~~  146 (176)
T TIGR00213       144 VKT  146 (176)
T ss_pred             CcE
Confidence            754

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=98.34  E-value=1.9e-07  Score=83.70  Aligned_cols=95  Identities=16%  Similarity=0.153  Sum_probs=77.5

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCC-CeeeeEEEecceeeeCC---cccccccccCCC-CCc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVYRDSCVFADG---EYLKDLTILGRD-LAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~-~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrd-l~~  254 (315)
                      +.+.||+.++|++|+ +.+.++|-|++...++..+++.++... .+|...+..++-...+.   .|.+-+.++|.. +++
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~  165 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS  165 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence            468899999999997 689999999999999999999998761 48988877666433332   366777888886 799


Q ss_pred             EEEEECCchhhccCCCCeeee
Q 021254          255 IAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      +++|+|++.-.......|+.+
T Consensus       166 ~~~igD~~~Di~aa~~aG~~~  186 (220)
T TIGR03351       166 VAVAGDTPNDLEAGINAGAGA  186 (220)
T ss_pred             eEEeCCCHHHHHHHHHCCCCe
Confidence            999999998777777778776

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR01684 viral_ppase viral phosphatase

Probab=98.34  E-value=1.4e-06  Score=83.33  Aligned_cols=127  Identities=17%  Similarity=0.124  Sum_probs=91.6

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeC-chHHHHHHHhhc-ccEEEEEcCCchhhHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQR-PYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lR-P~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~  216 (315)
                      ...++.+||||||||+....                     -|..| ||+.++|++|.+ .+.++|||++.+.++..+++
T Consensus       123 ~~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~  181 (301)
T TIGR01684       123 FEPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMR  181 (301)
T ss_pred             cccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Confidence            36778999999999999743                     14478 999999999995 69999999999999999999


Q ss_pred             HhCCCCCeeeeEEEecceeeeC----------------Ccccccc-----------------cccCCCCCc-EEEEECCc
Q 021254          217 ILDPNQTLIGQRVYRDSCVFAD----------------GEYLKDL-----------------TILGRDLAR-IAIVDNTP  262 (315)
Q Consensus       217 ~LDp~~~~f~~rl~Re~C~~~~----------------g~y~KDL-----------------~~Lgrdl~~-vIIIDDsp  262 (315)
                      .++..+ +|..++..++....+                ..+..|.                 ...|...-+ +.+|||-+
T Consensus       182 ~lGLd~-YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~  260 (301)
T TIGR01684       182 KVKLDR-YFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLA  260 (301)
T ss_pred             HcCCCc-ccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence            999986 887777755543322                1122333                 223444433 56888887


Q ss_pred             hhhccCCCCeeeeccccCCCCChHHH
Q 021254          263 QVFQLQVDNGIPIESWFGDPSDSALL  288 (315)
Q Consensus       263 ~~~~~q~~NgI~I~~f~~d~~D~eLl  288 (315)
                      ..= +.-+|-+.++..-...+|...-
T Consensus       261 ~Nn-~~YD~fv~v~rcp~P~~DW~~~  285 (301)
T TIGR01684       261 DNN-FNYDYFVNVSRCPVPVNDWDSY  285 (301)
T ss_pred             ccC-ccceeEEEeeeCCCCchHHHHH
Confidence            642 4568888887776666665443

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=98.33  E-value=4.1e-07  Score=85.46  Aligned_cols=94  Identities=12%  Similarity=0.097  Sum_probs=76.3

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      +..+||+.++|+.++ +.+.++|.|++...++..+++.++-.+ +|...+..+.+...+..   |.+-+..+|.+++++|
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l  178 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL  178 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence            457899999999998 579999999999999999999988765 78877776655443332   5666778899999999


Q ss_pred             EEECCchhhccCCCCeeee
Q 021254          257 IVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I  275 (315)
                      +|+|++.-......+|+..
T Consensus       179 ~IGD~~~Di~aA~~aGi~~  197 (272)
T PRK13223        179 FVGDSRSDVLAAKAAGVQC  197 (272)
T ss_pred             EECCCHHHHHHHHHCCCeE
Confidence            9999998876666777754

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.30  E-value=6.1e-07  Score=76.55  Aligned_cols=117  Identities=21%  Similarity=0.217  Sum_probs=79.4

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch-------------
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS-------------  208 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~-------------  208 (315)
                      ++|+||+||||+........ .            ...-+...||+.++|+.|+ +.|.++|.|++..             
T Consensus         1 ~~~~~d~dgtl~~~~~~~~~-~------------~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~   67 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDYP-R------------SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA   67 (147)
T ss_pred             CeEEEeCCCceeccCCcccC-C------------CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence            47899999999997531100 0            0011357899999999998 6799999999873             


Q ss_pred             --hhHHHHHHHhCCCCCeeeeEEEe-----cceeeeCC---cccccccccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          209 --IYAGQLLDILDPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       209 --~YA~~vL~~LDp~~~~f~~rl~R-----e~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                        .++..+++.++..   +...++.     +.....++   .+.+-+..+|.+++++++|+|++.-.......||..
T Consensus        68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~  141 (147)
T TIGR01656        68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA  141 (147)
T ss_pred             HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence              5667777777654   2222222     21111222   356777778999999999999988776666666654

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.29  E-value=5.8e-07  Score=80.54  Aligned_cols=97  Identities=13%  Similarity=0.192  Sum_probs=71.6

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEeccee-----------ee-CC-ccccccc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCV-----------FA-DG-EYLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~-----------~~-~g-~y~KDL~  246 (315)
                      +..+||+.+||+.+.+ .+.++|.|++...++..+++.++-.. +|...+..++..           .. ++ .+.+-++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~  162 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR  162 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence            5689999999999995 79999999999999999999988765 676544322111           00 11 2445556


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeeecccc
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      .+|.+++++++|+|++.-.......|+.+ .|.
T Consensus       163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~  194 (219)
T TIGR00338       163 KEGISPENTVAVGDGANDLSMIKAAGLGI-AFN  194 (219)
T ss_pred             HcCCCHHHEEEEECCHHHHHHHHhCCCeE-EeC
Confidence            67889999999999988776656667766 343

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PLN02940 riboflavin kinase

Probab=98.27  E-value=1.9e-07  Score=92.18  Aligned_cols=97  Identities=6%  Similarity=0.035  Sum_probs=80.3

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHH-HhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLD-ILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI  255 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~-~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~v  255 (315)
                      +...||+.++|++|. +.+.++|-|++.+.++..+++ ..+-.. +|+.++..+++...+.   .|.+-++.+|.+++++
T Consensus        92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~  170 (382)
T PLN02940         92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKE-SFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC  170 (382)
T ss_pred             CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHh-hCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence            456899999999998 669999999999999999887 566654 8999999888766554   4778888899999999


Q ss_pred             EEEECCchhhccCCCCeeeeccc
Q 021254          256 AIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      ++|+|++.........|+.+-..
T Consensus       171 l~VGDs~~Di~aA~~aGi~~I~v  193 (382)
T PLN02940        171 LVIEDSLPGVMAGKAAGMEVIAV  193 (382)
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEE
Confidence            99999998776666777765433

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=98.26  E-value=2.2e-07  Score=83.54  Aligned_cols=95  Identities=8%  Similarity=0.056  Sum_probs=77.0

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeee-eEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG-QRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~-~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.|.  +.++|.|++.+.+++.+++..+... +|. ..+..++....+.   .|.+-+..+|..+++++
T Consensus        87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l  163 (221)
T PRK10563         87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI  163 (221)
T ss_pred             CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            567799999999994  8999999999999999999988875 785 4555555544443   47788888999999999


Q ss_pred             EEECCchhhccCCCCeeeeccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +|+|++.........|+++.-+
T Consensus       164 ~igDs~~di~aA~~aG~~~i~~  185 (221)
T PRK10563        164 LVDDSSAGAQSGIAAGMEVFYF  185 (221)
T ss_pred             EEeCcHhhHHHHHHCCCEEEEE
Confidence            9999999887777788777544

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.26  E-value=3.1e-06  Score=73.98  Aligned_cols=125  Identities=18%  Similarity=0.090  Sum_probs=90.4

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCC---------------
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAG---------------  206 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas---------------  206 (315)
                      +.+.||.||||++....     .|  .     ....-.+..-||+.++|++|. +.|.++|.|+.               
T Consensus         2 ~~~~~d~dg~l~~~~~~-----~~--~-----~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~   69 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPS-----DF--Q-----VDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG   69 (161)
T ss_pred             CEEEEeCCCCccccCCC-----cc--c-----cCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence            57899999999984321     11  0     011113667899999999999 57999999996               


Q ss_pred             chhhHHHHHHHhCCCCCeeeeEEEe-----cceeeeCCc---ccccccccCCCCCcEEEEECCchhhccCCCCeeeeccc
Q 021254          207 QSIYAGQLLDILDPNQTLIGQRVYR-----DSCVFADGE---YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       207 ~~~YA~~vL~~LDp~~~~f~~rl~R-----e~C~~~~g~---y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      ...++..+++.++..   |...++.     +++...++.   +..-++.+|.+++++++|.|+..-......+|+..-.+
T Consensus        70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~  146 (161)
T TIGR01261        70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY  146 (161)
T ss_pred             HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence            356888888888875   7666653     565554443   45556677999999999999988777777888887665


Q ss_pred             cCCC
Q 021254          279 FGDP  282 (315)
Q Consensus       279 ~~d~  282 (315)
                      ...+
T Consensus       147 ~~~~  150 (161)
T TIGR01261       147 DEEE  150 (161)
T ss_pred             Chhh
Confidence            5443

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PHA02597 30

Probab=98.24  E-value=1.6e-07  Score=83.03  Aligned_cols=96  Identities=11%  Similarity=0.084  Sum_probs=69.2

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCC---CeeeeEEEecceeeeCCcccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQ---TLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~---~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vII  257 (315)
                      +...||+.++|++|++.+.+++-|++.......+++.+...+   .+|+..+..+.+......+.+-++.+|  ++.+|+
T Consensus        73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~  150 (197)
T PHA02597         73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF  150 (197)
T ss_pred             ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence            567999999999999777777777766655555666664432   156667666664332234666777788  688999


Q ss_pred             EECCchhhccCCCC--eeeeccc
Q 021254          258 VDNTPQVFQLQVDN--GIPIESW  278 (315)
Q Consensus       258 IDDsp~~~~~q~~N--gI~I~~f  278 (315)
                      |||++........+  ||..-.+
T Consensus       151 vgDs~~di~aA~~a~~Gi~~i~~  173 (197)
T PHA02597        151 VDDLAHNLDAAHEALSQLPVIHM  173 (197)
T ss_pred             eCCCHHHHHHHHHHHcCCcEEEe
Confidence            99999988777788  8877655

2 hypothetical protein; Provisional

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=98.23  E-value=8.1e-07  Score=87.72  Aligned_cols=137  Identities=24%  Similarity=0.418  Sum_probs=102.0

Q ss_pred             CCCCeEEEEeCCcceeceecCCCC--CC--------CceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCch
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCK--DA--------DFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQS  208 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~--~~--------d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~  208 (315)
                      ..++..||.|+|.|..|+...+..  +.        .......+......++++.||++..|+...++.|++.+||.+..
T Consensus        23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~  102 (390)
T COG5190          23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR  102 (390)
T ss_pred             cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence            356778999999999999876511  00        00011112223456889999999999999999999999999999


Q ss_pred             hhHHHHHHHhCCCCCeeeeEEEecceeeeCCccccccccc-CCCCCcEEEEECCchhhcc--CCCCeeeecc
Q 021254          209 IYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVFQL--QVDNGIPIES  277 (315)
Q Consensus       209 ~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~L-grdl~~vIIIDDsp~~~~~--q~~NgI~I~~  277 (315)
                      .||..+.+++||.|++|..+....+-  ..+.-.|-++++ ..+.+.++++||.+..|.-  --.|.+...+
T Consensus       103 ~~~~~~~~i~d~~g~~~~d~~~~~~~--~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v~~~~  172 (390)
T COG5190         103 AYAERIAKIIDPTGKLFNDRILSRDE--SGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFVAKSP  172 (390)
T ss_pred             cchhhhhhcccccccccccccccccc--cccchhhhhhhcCccccccccccccccccCCccchhhhhhcccc
Confidence            99999999999999999877653321  233456777777 7888899999999999921  2355555555

>TIGR01686 FkbH FkbH-like domain

Probab=98.20  E-value=2.4e-06  Score=82.14  Aligned_cols=109  Identities=15%  Similarity=0.065  Sum_probs=77.7

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHH--
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDI--  217 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~--  217 (315)
                      .++++|+|||+||+.-..-...            ...-.+....|++.++|+.|+ +.+.++|.|+.....|..+++.  
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e~g------------~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~   69 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGEDG------------IDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK   69 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEccCC------------ccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence            4789999999999976531110            000001124789999999999 6799999999999999999998  


Q ss_pred             --hCCCCCeeeeEEEecceeeeC-CcccccccccCCCCCcEEEEECCchhh
Q 021254          218 --LDPNQTLIGQRVYRDSCVFAD-GEYLKDLTILGRDLARIAIVDNTPQVF  265 (315)
Q Consensus       218 --LDp~~~~f~~rl~Re~C~~~~-g~y~KDL~~Lgrdl~~vIIIDDsp~~~  265 (315)
                        +.... +|......   ...+ ..+.+-+..+|.+++.+|+|||++...
T Consensus        70 ~~~~~~~-~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~  116 (320)
T TIGR01686        70 DFILQAE-DFDARSIN---WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER  116 (320)
T ss_pred             cccCcHH-HeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence              65543 56544221   1112 235566677899999999999999865

The C-terminal portion of this domain is unique to this family (by BLAST).

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=98.19  E-value=3.7e-06  Score=73.83  Aligned_cols=117  Identities=16%  Similarity=0.043  Sum_probs=79.1

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCch------------
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS------------  208 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~------------  208 (315)
                      .+.++||+||||+..... ..           ....  .+...||+.++|++|++ .|.++|.|++..            
T Consensus         3 ~~~~~~d~~~t~~~~~~~-~~-----------~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~   68 (181)
T PRK08942          3 MKAIFLDRDGVINVDSDG-YV-----------KSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN   68 (181)
T ss_pred             ccEEEEECCCCcccCCcc-cc-----------CCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence            467999999998665311 00           0011  24578999999999995 699999998863            


Q ss_pred             ---hhHHHHHHHhCCCCCeeeeEEEecc-----eeeeCC---cccccccccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          209 ---IYAGQLLDILDPNQTLIGQRVYRDS-----CVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       209 ---~YA~~vL~~LDp~~~~f~~rl~Re~-----C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                         .+...+++.++.   +|...++...     +...+.   .|.+-+..+|.+++++++|+|++.-.......|+.+
T Consensus        69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~  143 (181)
T PRK08942         69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTP  143 (181)
T ss_pred             HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence               333444554432   3666665433     222332   367888889999999999999998776666666643

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=98.17  E-value=7.7e-07  Score=75.30  Aligned_cols=81  Identities=15%  Similarity=0.032  Sum_probs=65.6

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      ....||+.++|+.+. +.+.++|.|++.+..+..+++.+ .. .+|...+..+++. .++   .|.+-++.+|.++ +++
T Consensus        63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l  138 (154)
T TIGR01549        63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVL  138 (154)
T ss_pred             heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEE
Confidence            445699999999997 67999999999999999999996 33 4788877777765 443   3677778889988 999


Q ss_pred             EEECCchhh
Q 021254          257 IVDNTPQVF  265 (315)
Q Consensus       257 IIDDsp~~~  265 (315)
                      +|.|++.-.
T Consensus       139 ~iGDs~~Di  147 (154)
T TIGR01549       139 HVGDNLNDI  147 (154)
T ss_pred             EEeCCHHHH
Confidence            999997543

HAD subfamilies caused by an overly broad single model.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.17  E-value=2e-06  Score=81.03  Aligned_cols=128  Identities=13%  Similarity=0.128  Sum_probs=94.6

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      .++..+++|+||||........  .++.      .   ..-....|++.++|+.+. +.+.++|.|+.....+..+++.|
T Consensus       156 ~~~~~~~~D~dgtl~~~~~~~~--~~~~------~---~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l  224 (300)
T PHA02530        156 GLPKAVIFDIDGTLAKMGGRSP--YDWT------K---VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL  224 (300)
T ss_pred             CCCCEEEEECCCcCcCCCCCCc--cchh------h---cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence            4457899999999998753211  1111      0   112346899999999998 56999999999999999999999


Q ss_pred             CCCCCeeeeEEEecc-------eeeeCC---cccccccccCC-CCCcEEEEECCchhhccCCCCeeeeccc
Q 021254          219 DPNQTLIGQRVYRDS-------CVFADG---EYLKDLTILGR-DLARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       219 Dp~~~~f~~rl~Re~-------C~~~~g---~y~KDL~~Lgr-dl~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +..+.+|...+..+.       +...+.   .+.+.|..++. +++.+++|||++........+||++-..
T Consensus       225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v  295 (300)
T PHA02530        225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV  295 (300)
T ss_pred             HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence            988767877666652       112222   24456666777 6799999999999988888899887554

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.12  E-value=6.8e-06  Score=72.77  Aligned_cols=118  Identities=16%  Similarity=0.193  Sum_probs=66.8

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecC----eeeeeeEeeCchHHHHHHHhh-cccEEEEEcC-CchhhHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKM----EVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTA-GQSIYAGQLL  215 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~----~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTa-s~~~YA~~vL  215 (315)
                      ++.+|||||.||+..-....-.+.|.-  .-++    ...+.-|.+-|++.+.|+.|. ...+|++.|. ..+..|.++|
T Consensus         3 PklvvFDLD~TlW~~~~~~~~~~Pf~~--~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L   80 (169)
T PF12689_consen    3 PKLVVFDLDYTLWPPWMDTHVGPPFKK--ISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL   80 (169)
T ss_dssp             -SEEEE-STTTSSSS-TTTSS-S-EEE---TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH
T ss_pred             CcEEEEcCcCCCCchhHhhccCCCcee--cCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH
Confidence            468999999999987653332222211  0111    123445889999999999999 6899999995 5788999999


Q ss_pred             HHhCCC----------CCeeeeEEEecceeeeCCccccccc-ccCCCCCcEEEEECCchhh
Q 021254          216 DILDPN----------QTLIGQRVYRDSCVFADGEYLKDLT-ILGRDLARIAIVDNTPQVF  265 (315)
Q Consensus       216 ~~LDp~----------~~~f~~rl~Re~C~~~~g~y~KDL~-~Lgrdl~~vIIIDDsp~~~  265 (315)
                      +.|+..          . +|.+.=.-..   .+..+++.|. ..|.+.+.++++||.....
T Consensus        81 ~~l~i~~~~~~~~~~~~-~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~  137 (169)
T PF12689_consen   81 KLLEIDDADGDGVPLIE-YFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNI  137 (169)
T ss_dssp             HHTT-C----------C-CECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred             HhcCCCccccccccchh-hcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence            999877          3 5544221111   1223444444 5699999999999988754

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.09  E-value=2.9e-06  Score=78.87  Aligned_cols=133  Identities=11%  Similarity=-0.009  Sum_probs=81.1

Q ss_pred             CCCCeEEEEeCCcceeceecC-----CC-CCCCcee--eeeecC---eeeeeeEeeCchHHHHHHHhh-cccEEEEEcCC
Q 021254          139 AGLPITLVLDLDETLVHSSFD-----NC-KDADFSF--PIHSKM---EVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAG  206 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~-----~~-~~~d~~~--~i~~~~---~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas  206 (315)
                      .++++.++|||||||++|+.-     +. ...++.+  .-.+..   ..........|++.+||+++. +.+.++|-|+.
T Consensus        60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr  139 (237)
T TIGR01672        60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR  139 (237)
T ss_pred             CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence            355679999999999999851     10 1111111  000000   000112334455999999998 57999999998


Q ss_pred             ----chhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          207 ----QSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       207 ----~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                          ...+++.+++.++... +|...+..+.....+.  -|. ..+. ...-+|+|-|+..-+.....+|+...
T Consensus       140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~~Kp--~~~-~~l~-~~~i~i~vGDs~~DI~aAk~AGi~~I  208 (237)
T TIGR01672       140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQYQY--TKT-QWIQ-DKNIRIHYGDSDNDITAAKEAGARGI  208 (237)
T ss_pred             CCCcCHHHHHHHHHHhCCch-heeEEECCCCCCCCCC--CHH-HHHH-hCCCeEEEeCCHHHHHHHHHCCCCEE
Confidence                6679999999998875 7766555554322111  122 1121 22337999999987766666666643

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.03  E-value=1.6e-05  Score=69.81  Aligned_cols=107  Identities=19%  Similarity=0.249  Sum_probs=70.1

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchh-----------
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSI-----------  209 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~-----------  209 (315)
                      ++.++||+||||+.......    +  .    ..... +...-||+.+.|++|. +.|.++|.|++...           
T Consensus        13 ~k~~~~D~Dgtl~~~~~~~~----~--~----~~~~~-~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~   81 (166)
T TIGR01664        13 SKVAAFDLDGTLITTRSGKV----F--P----TSASD-WRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK   81 (166)
T ss_pred             CcEEEEeCCCceEecCCCCc----c--c----CChHH-eEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence            46789999999997642110    0  0    00001 1124599999999997 68999999997763           


Q ss_pred             -hHHHHHHHhCCCCCeeeeEEEecceeeeC---CcccccccccC--CCCCcEEEEECCc
Q 021254          210 -YAGQLLDILDPNQTLIGQRVYRDSCVFAD---GEYLKDLTILG--RDLARIAIVDNTP  262 (315)
Q Consensus       210 -YA~~vL~~LDp~~~~f~~rl~Re~C~~~~---g~y~KDL~~Lg--rdl~~vIIIDDsp  262 (315)
                       ++..+++.++..   +...+..+.....+   +.+..-+..+|  .+++++++|.|++
T Consensus        82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~  137 (166)
T TIGR01664        82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA  137 (166)
T ss_pred             HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence             567788888764   22333333322222   23455566777  8999999999997

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.02  E-value=3e-06  Score=93.54  Aligned_cols=98  Identities=12%  Similarity=0.080  Sum_probs=83.2

Q ss_pred             eCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEEE
Q 021254          183 QRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAIV  258 (315)
Q Consensus       183 lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vIII  258 (315)
                      ..||+.++|++|+ +.+.++|.|++...+++.+++.++....+|+..+..+++...+.   .|.+-++.+|.+++++|+|
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I  241 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI  241 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence            4799999999998 67999999999999999999999875447999988888776554   4788888999999999999


Q ss_pred             ECCchhhccCCCCeeeeccccC
Q 021254          259 DNTPQVFQLQVDNGIPIESWFG  280 (315)
Q Consensus       259 DDsp~~~~~q~~NgI~I~~f~~  280 (315)
                      +|++..+......|+..-....
T Consensus       242 gDs~~Di~AA~~aGm~~I~v~~  263 (1057)
T PLN02919        242 EDALAGVQAARAAGMRCIAVTT  263 (1057)
T ss_pred             cCCHHHHHHHHHcCCEEEEECC
Confidence            9999988777778877665543

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=97.96  E-value=6.9e-06  Score=69.04  Aligned_cols=95  Identities=19%  Similarity=0.258  Sum_probs=80.3

Q ss_pred             eeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCc
Q 021254          179 VFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (315)
Q Consensus       179 ~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~  254 (315)
                      ......|++.++|+.++ +.+.++|.|++...++..+++.+.... +|+..++.+++...+.   .|.+-++.+|.++++
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~  152 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD-YFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE  152 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG-GCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc-ccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence            45788999999999999 899999999999999999999998774 8998888887666554   377778888999999


Q ss_pred             EEEEECCchhhccCCCCeee
Q 021254          255 IAIVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~  274 (315)
                      +++|||++.........|+.
T Consensus       153 ~~~vgD~~~d~~~A~~~G~~  172 (176)
T PF13419_consen  153 ILFVGDSPSDVEAAKEAGIK  172 (176)
T ss_dssp             EEEEESSHHHHHHHHHTTSE
T ss_pred             EEEEeCCHHHHHHHHHcCCe
Confidence            99999999876555555554

...

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=97.94  E-value=9.7e-06  Score=73.60  Aligned_cols=95  Identities=20%  Similarity=0.153  Sum_probs=78.0

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      ...-||+.+.|+.++ +.|.++|.|+.....++.+++.++... +|..++..+.+...++.   ...-+..+|.+++++|
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l  166 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL  166 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence            467899999999999 679999999999999999999999986 89888875555555543   4566677888877999


Q ss_pred             EEECCchhhccCCCCeeeec
Q 021254          257 IVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~  276 (315)
                      +|=|+..-......+|++..
T Consensus       167 ~VGDs~~Di~aA~~Ag~~~v  186 (220)
T COG0546         167 MVGDSLNDILAAKAAGVPAV  186 (220)
T ss_pred             EECCCHHHHHHHHHcCCCEE
Confidence            99999998877777775533

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=97.91  E-value=4.5e-06  Score=83.94  Aligned_cols=92  Identities=14%  Similarity=0.152  Sum_probs=72.5

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceee-eCC-cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF-ADG-EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~-~~g-~y~KDL~~Lgrdl~~vII  257 (315)
                      +.+.||+.++|++|+ +.+.++|.|++...++..+++.++-.. +|...+..++... .+. .|.+-+..+  +++++|+
T Consensus       329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~  405 (459)
T PRK06698        329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV  405 (459)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence            567899999999998 679999999999999999999998876 8988888776421 122 244445454  4688999


Q ss_pred             EECCchhhccCCCCeeee
Q 021254          258 VDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I  275 (315)
                      |.|++.-+......|+..
T Consensus       406 VGDs~~Di~aAk~AG~~~  423 (459)
T PRK06698        406 VGDRLSDINAAKDNGLIA  423 (459)
T ss_pred             EeCCHHHHHHHHHCCCeE
Confidence            999998777677777765

>PRK06769 hypothetical protein; Validated

Probab=97.90  E-value=1.5e-05  Score=69.97  Aligned_cols=119  Identities=13%  Similarity=0.106  Sum_probs=75.1

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhh-----HHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIY-----AGQLL  215 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~Y-----A~~vL  215 (315)
                      -..|+||+||||.-...       +         ...--+..-||+.++|++|+ +.|.++|.|++....     .....
T Consensus         4 ~~~~~~d~d~~~~~~~~-------~---------~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~   67 (173)
T PRK06769          4 IQAIFIDRDGTIGGDTT-------I---------HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFV   67 (173)
T ss_pred             CcEEEEeCCCcccCCCC-------C---------CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHH
Confidence            35789999999952210       0         00012346899999999998 579999999976421     11233


Q ss_pred             HHhCCCCCeeeeEEE-----ecceeeeCC---cccccccccCCCCCcEEEEECCchhhccCCCCeeeeccc
Q 021254          216 DILDPNQTLIGQRVY-----RDSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       216 ~~LDp~~~~f~~rl~-----Re~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      ..+...+  |...+.     .+.+...+.   .|.+-++.+|.+++++++|+|++.-.......|+.....
T Consensus        68 ~~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v  136 (173)
T PRK06769         68 QELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV  136 (173)
T ss_pred             HHHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence            3333323  333332     222222332   477888889999999999999998776666666665433

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=97.87  E-value=1.8e-05  Score=73.10  Aligned_cols=97  Identities=14%  Similarity=0.212  Sum_probs=83.7

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|++|. +.+.++|-|++...++..+++.++... +|+.++..+++...+.   .|.+-+..+|.++++++
T Consensus       107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l  185 (248)
T PLN02770        107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF  185 (248)
T ss_pred             CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence            567899999999997 679999999999999999999999875 8999999888765554   37888899999999999


Q ss_pred             EEECCchhhccCCCCeeeeccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +|+|++.-......+|+..-..
T Consensus       186 ~vgDs~~Di~aA~~aGi~~i~v  207 (248)
T PLN02770        186 VFEDSVSGIKAGVAAGMPVVGL  207 (248)
T ss_pred             EEcCCHHHHHHHHHCCCEEEEE
Confidence            9999998877777888876544

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=97.86  E-value=1.4e-05  Score=71.36  Aligned_cols=96  Identities=14%  Similarity=0.149  Sum_probs=79.2

Q ss_pred             eEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcE
Q 021254          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI  255 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~v  255 (315)
                      ++.+.||+.++|++|.+ .+.++|.|++...++...++.++... +|+.++..+.....+.   .|.+-++.+|.+++++
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~  170 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA  170 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence            35789999999999985 59999999999999999999998875 8998888877665544   4778888999999999


Q ss_pred             EEEECCc-hhhccCCCCeeeec
Q 021254          256 AIVDNTP-QVFQLQVDNGIPIE  276 (315)
Q Consensus       256 IIIDDsp-~~~~~q~~NgI~I~  276 (315)
                      |+|+|++ .-+......|+...
T Consensus       171 ~~igDs~~~di~~A~~aG~~~i  192 (221)
T TIGR02253       171 VMVGDRLDKDIKGAKNLGMKTV  192 (221)
T ss_pred             EEECCChHHHHHHHHHCCCEEE
Confidence            9999998 45555556666543

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=97.82  E-value=2.4e-05  Score=69.60  Aligned_cols=96  Identities=16%  Similarity=0.084  Sum_probs=80.9

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|++|. +.+.++|.|++...++..+++.++..+ +|+..+..+++...+.   .|.+-+..+|.++++++
T Consensus        74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l  152 (205)
T TIGR01454        74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV  152 (205)
T ss_pred             cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence            667899999999998 579999999999999999999998876 8998888777654333   36677788899999999


Q ss_pred             EEECCchhhccCCCCeeeecc
Q 021254          257 IVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~  277 (315)
                      +|+|++.-+.....+|+....
T Consensus       153 ~igD~~~Di~aA~~~Gi~~i~  173 (205)
T TIGR01454       153 MVGDAVTDLASARAAGTATVA  173 (205)
T ss_pred             EEcCCHHHHHHHHHcCCeEEE
Confidence            999999877777788887654

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=97.80  E-value=2.1e-05  Score=69.74  Aligned_cols=97  Identities=18%  Similarity=0.118  Sum_probs=80.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +..+||+.++|+.++ +.+.++|.|++...++..+++.++-.+ +|...+..+.....++   .|.+-++.+|.++++++
T Consensus        84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~  162 (213)
T TIGR01449        84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV  162 (213)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence            578999999999998 579999999999999999999998875 7887777665444443   36788888999999999


Q ss_pred             EEECCchhhccCCCCeeeeccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +|+|++.-+......|++.-..
T Consensus       163 ~igDs~~d~~aa~~aG~~~i~v  184 (213)
T TIGR01449       163 YVGDSRVDIQAARAAGCPSVLL  184 (213)
T ss_pred             EeCCCHHHHHHHHHCCCeEEEE
Confidence            9999998876666777776544

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=97.78  E-value=0.00015  Score=71.29  Aligned_cols=138  Identities=16%  Similarity=0.115  Sum_probs=89.8

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCC-------------
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAG-------------  206 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas-------------  206 (315)
                      +++.|+||-||||+......     +.       ......+...||+.++|++|. +.|.++|.|+.             
T Consensus         1 ~~k~l~lDrDgtl~~~~~~~-----y~-------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l   68 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPTD-----FQ-------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF   68 (354)
T ss_pred             CCcEEEEeCCCCccCCCCcc-----cc-------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence            46789999999999974211     00       111223678999999999998 46999999995             


Q ss_pred             --chhhHHHHHHHhCCCCCeeeeEEEe-----cceeeeCCc---ccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          207 --QSIYAGQLLDILDPNQTLIGQRVYR-----DSCVFADGE---YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       207 --~~~YA~~vL~~LDp~~~~f~~rl~R-----e~C~~~~g~---y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                        ...++..+++.++.   +|...++.     +.|...+..   +..-+..++.+++++++|-|+..-......+|+..-
T Consensus        69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I  145 (354)
T PRK05446         69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI  145 (354)
T ss_pred             hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence              24456666666654   36555554     455444432   334445678899999999999877766667777755


Q ss_pred             cccCCCCChHHHHHHHHHh
Q 021254          277 SWFGDPSDSALLSLLMFLE  295 (315)
Q Consensus       277 ~f~~d~~D~eLl~L~~~L~  295 (315)
                      -...+.-  ..-++..+|.
T Consensus       146 ~v~~~~~--~~~~i~~~l~  162 (354)
T PRK05446        146 RYARETL--NWDAIAEQLT  162 (354)
T ss_pred             EEECCCC--CHHHHHHHHh
Confidence            3322222  2225555553

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.76  E-value=2.6e-05  Score=68.39  Aligned_cols=111  Identities=17%  Similarity=0.073  Sum_probs=78.2

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc-hhhHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ-SIYAGQLLD  216 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~-~~YA~~vL~  216 (315)
                      ..+-..+|+|+||||+....                      ...-|++.++|++|. +.+.++|.|++. ...+..+++
T Consensus        22 ~~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~   79 (170)
T TIGR01668        22 KVGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEK   79 (170)
T ss_pred             HCCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHH
Confidence            35667899999999997521                      124799999999998 459999999998 678888887


Q ss_pred             HhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCch-hhccCCCCeeeeccc
Q 021254          217 ILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ-VFQLQVDNGIPIESW  278 (315)
Q Consensus       217 ~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~-~~~~q~~NgI~I~~f  278 (315)
                      .++... +     . ....-....|.+-++.+|.+++++++|+|+.. -......+|+..--+
T Consensus        80 ~~gl~~-~-----~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v  135 (170)
T TIGR01668        80 ALGIPV-L-----P-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV  135 (170)
T ss_pred             HcCCEE-E-----c-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence            775431 1     1 11111122466777788999999999999984 555555666654433

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=97.76  E-value=2.5e-05  Score=68.96  Aligned_cols=94  Identities=15%  Similarity=0.145  Sum_probs=78.3

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+++++ .|.++|.|++...++..+++.++... +|+.++..++....+.   .|.+-++.+|.++++++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~  169 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDD-PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL  169 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChh-hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence            5567999999999996 59999999999999999999998664 8998888877655443   36777888999999999


Q ss_pred             EEECCchhhccCCCCeeee
Q 021254          257 IVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I  275 (315)
                      +|+|++.-.......|+..
T Consensus       170 ~vgD~~~Di~~A~~~G~~~  188 (198)
T TIGR01428       170 FVASNPWDLGGAKKFGFKT  188 (198)
T ss_pred             EEeCCHHHHHHHHHCCCcE
Confidence            9999997666666677654

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=97.70  E-value=3.4e-05  Score=68.72  Aligned_cols=94  Identities=10%  Similarity=0.057  Sum_probs=78.7

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---ccccccccc-CCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTIL-GRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~L-grdl~~vI  256 (315)
                      +..+||+.++|+++++.+.++|-|++...++..+++.++-.+ +|+.++..+.+...+.   .|.+-++.+ |.+++++|
T Consensus        96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v  174 (224)
T TIGR02254        96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL  174 (224)
T ss_pred             CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence            578999999999999669999999999999999999998876 8998888877665554   377888899 99999999


Q ss_pred             EEECCc-hhhccCCCCeeee
Q 021254          257 IVDNTP-QVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp-~~~~~q~~NgI~I  275 (315)
                      +|+|++ ........+|++.
T Consensus       175 ~igD~~~~di~~A~~~G~~~  194 (224)
T TIGR02254       175 MIGDSLTADIKGGQNAGLDT  194 (224)
T ss_pred             EECCCcHHHHHHHHHCCCcE
Confidence            999997 4565555666654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=97.68  E-value=3.8e-05  Score=68.26  Aligned_cols=102  Identities=14%  Similarity=0.103  Sum_probs=80.8

Q ss_pred             eEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcE
Q 021254          180 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARI  255 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~v  255 (315)
                      +...+||+.++|++++ +.+.++|.|++....+..++.....-..+|+..++.+++...++.   |..-++.+|.+++++
T Consensus        82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~  161 (199)
T PRK09456         82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA  161 (199)
T ss_pred             HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence            3567899999999998 579999999999887766654421113478888888887766653   778888999999999


Q ss_pred             EEEECCchhhccCCCCeeeeccccCC
Q 021254          256 AIVDNTPQVFQLQVDNGIPIESWFGD  281 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I~~f~~d  281 (315)
                      ++|||++.........|+....+.+.
T Consensus       162 l~vgD~~~di~aA~~aG~~~i~~~~~  187 (199)
T PRK09456        162 VFFDDNADNIEAANALGITSILVTDK  187 (199)
T ss_pred             EEeCCCHHHHHHHHHcCCEEEEecCC
Confidence            99999999887777888887665543

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.65  E-value=6.1e-05  Score=65.15  Aligned_cols=87  Identities=11%  Similarity=0.173  Sum_probs=61.1

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC-----------------ccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG-----------------EYL  242 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g-----------------~y~  242 (315)
                      +.++||+.++|+.+. +.+.++|.|++...+++.+++.++... +|..++..+......|                 ...
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~  149 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC  149 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence            678999999999998 469999999999999999999987654 6777665332111101                 112


Q ss_pred             c--cccccCCC-CCcEEEEECCchhhccC
Q 021254          243 K--DLTILGRD-LARIAIVDNTPQVFQLQ  268 (315)
Q Consensus       243 K--DL~~Lgrd-l~~vIIIDDsp~~~~~q  268 (315)
                      |  -+..+... ++++|+|+|+..-+...
T Consensus       150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa  178 (188)
T TIGR01489       150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPA  178 (188)
T ss_pred             HHHHHHHHHhhcCceEEEECCCcchhchH
Confidence            3  22233333 78899999998765433

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=97.65  E-value=5.5e-05  Score=68.16  Aligned_cols=101  Identities=10%  Similarity=0.027  Sum_probs=84.4

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|++++ +.+.++|.|++....++.+++.++..+ +|+..+..+.....++   .|..-++.+|.++++++
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  169 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV  169 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            467799999999998 679999999999999999999998776 8988888776554443   36777888899999999


Q ss_pred             EEECCchhhccCCCCeeeeccccCCC
Q 021254          257 IVDNTPQVFQLQVDNGIPIESWFGDP  282 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f~~d~  282 (315)
                      +|+|++.-.......|++.--+....
T Consensus       170 ~igDs~~Di~aA~~aG~~~i~v~~~~  195 (222)
T PRK10826        170 ALEDSFNGMIAAKAARMRSIVVPAPE  195 (222)
T ss_pred             EEcCChhhHHHHHHcCCEEEEecCCc
Confidence            99999998877788888876665443

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.63  E-value=0.00032  Score=66.71  Aligned_cols=125  Identities=19%  Similarity=0.173  Sum_probs=85.7

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEee-CchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQ-RPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~l-RP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~  216 (315)
                      ..++-.+|||||.|||.....                     +.. -|.+-+-|.++++ +.-+++||.|.+++|..-++
T Consensus       119 ~~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~  177 (297)
T PF05152_consen  119 WEPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLK  177 (297)
T ss_pred             CCCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHH
Confidence            356669999999999987532                     112 3889999999995 56899999999999999999


Q ss_pred             HhCCCCCeeeeEEEecceeee----------------CCccccccc-----------------ccCCCCCc-EEEEECCc
Q 021254          217 ILDPNQTLIGQRVYRDSCVFA----------------DGEYLKDLT-----------------ILGRDLAR-IAIVDNTP  262 (315)
Q Consensus       217 ~LDp~~~~f~~rl~Re~C~~~----------------~g~y~KDL~-----------------~Lgrdl~~-vIIIDDsp  262 (315)
                      .++..+ +|...+.+..-.-.                ...+..|..                 ..|...-+ +-+|||-+
T Consensus       178 ~~~L~~-~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~  256 (297)
T PF05152_consen  178 ELKLEG-YFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK  256 (297)
T ss_pred             HhCCcc-ccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence            999885 89988875442111                111222222                 22444333 45777766


Q ss_pred             hhhccCCCCeeeeccccCCCCChH
Q 021254          263 QVFQLQVDNGIPIESWFGDPSDSA  286 (315)
Q Consensus       263 ~~~~~q~~NgI~I~~f~~d~~D~e  286 (315)
                      .. .+.-+|-+.++..-...+|..
T Consensus       257 ~N-n~~YD~FVnvkrcp~P~~DW~  279 (297)
T PF05152_consen  257 SN-NYSYDYFVNVKRCPVPVNDWQ  279 (297)
T ss_pred             cc-CccceeEEEeccCCCCchHHH
Confidence            44 356777777777665555553

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=97.62  E-value=6.3e-05  Score=64.86  Aligned_cols=111  Identities=15%  Similarity=0.101  Sum_probs=76.8

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.++||+||||+........          +++.. -++.++|+.  -|++|+ +.+.++|-|+.....+..+++.+...
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~----------~~~~~-~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~   68 (154)
T TIGR01670         2 RLLILDVDGVLTDGKIYYTN----------NGEEI-KAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT   68 (154)
T ss_pred             eEEEEeCceeEEcCeEEECC----------CCcEE-EEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence            46889999999964221000          11111 224567776  788888 57999999999999999999999876


Q ss_pred             CCeeeeEEEecceeeeCC-cccccccccCCCCCcEEEEECCchhhccCCCCeee
Q 021254          222 QTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       222 ~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~  274 (315)
                      . +|...       ..+. .+.+-+..+|.+++++++|-|+..-...-...|+.
T Consensus        69 ~-~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~  114 (154)
T TIGR01670        69 H-LYQGQ-------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS  114 (154)
T ss_pred             E-EEecc-------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence            4 55421       1122 24455567788999999999999876555555555

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.62  E-value=2.2e-05  Score=69.52  Aligned_cols=94  Identities=17%  Similarity=0.134  Sum_probs=62.8

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEec-ceee-----eCC-cccccccccCCCCC
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD-SCVF-----ADG-EYLKDLTILGRDLA  253 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re-~C~~-----~~g-~y~KDL~~Lgrdl~  253 (315)
                      +..+||+.++|+.+++.+.++|.|++...+++.+++.++... +|...+.-. +...     ..+ ....-+..++...+
T Consensus        67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~  145 (205)
T PRK13582         67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY  145 (205)
T ss_pred             CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence            567899999999999669999999999999999999998764 665544321 1100     011 11111223344557


Q ss_pred             cEEEEECCchhhccCCCCeeee
Q 021254          254 RIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      +++.|.|+..-......+|+.+
T Consensus       146 ~~v~iGDs~~D~~~~~aa~~~v  167 (205)
T PRK13582        146 RVIAAGDSYNDTTMLGEADAGI  167 (205)
T ss_pred             eEEEEeCCHHHHHHHHhCCCCE
Confidence            8999999998654444444444

>PRK09449 dUMP phosphatase; Provisional

Probab=97.60  E-value=6.4e-05  Score=67.53  Aligned_cols=93  Identities=17%  Similarity=0.158  Sum_probs=76.5

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCC-CCCcEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGR-DLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgr-dl~~vI  256 (315)
                      +...||+.++|++|++.+.++|.|++...++...++.++..+ +|+..+..+++...++   .|.+-++.+|. +.++++
T Consensus        94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~  172 (224)
T PRK09449         94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL  172 (224)
T ss_pred             CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence            467899999999999889999999999999999999988875 8999998888766554   37788888986 457899


Q ss_pred             EEECCch-hhccCCCCeee
Q 021254          257 IVDNTPQ-VFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~-~~~~q~~NgI~  274 (315)
                      +|+|++. -.......|+.
T Consensus       173 ~vgD~~~~Di~~A~~aG~~  191 (224)
T PRK09449        173 MVGDNLHSDILGGINAGID  191 (224)
T ss_pred             EEcCCcHHHHHHHHHCCCc
Confidence            9999984 55555555654

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=97.59  E-value=4e-05  Score=66.36  Aligned_cols=92  Identities=15%  Similarity=0.139  Sum_probs=75.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.|. ..+.++|-|++  .++..+++.++..+ +|+.++..+.+...+.   .|.+-++.+|.+++++|
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v  163 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV  163 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            568999999999998 46999999988  78999999988765 7988888776654443   36677788899999999


Q ss_pred             EEECCchhhccCCCCeeee
Q 021254          257 IVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I  275 (315)
                      +|+|++........+|++.
T Consensus       164 ~IgD~~~di~aA~~~G~~~  182 (185)
T TIGR02009       164 VFEDALAGVQAARAAGMFA  182 (185)
T ss_pred             EEeCcHhhHHHHHHCCCeE
Confidence            9999998777666777754

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.58  E-value=5.3e-05  Score=69.60  Aligned_cols=88  Identities=16%  Similarity=0.191  Sum_probs=70.9

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEeccee---------eeCCcccccccccCCC
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCV---------FADGEYLKDLTILGRD  251 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~---------~~~g~y~KDL~~Lgrd  251 (315)
                      ++--|-|+++|-.|.+.+ .++||.+.+..|..+|+.|+... +|..+++.+--.         -....|.|-....|.+
T Consensus        99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~  176 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID  176 (244)
T ss_pred             cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence            566678999999999777 89999999999999999999986 899888854422         2233467777778888


Q ss_pred             -CCcEEEEECCchhhccCCC
Q 021254          252 -LARIAIVDNTPQVFQLQVD  270 (315)
Q Consensus       252 -l~~vIIIDDsp~~~~~q~~  270 (315)
                       ++||+++|||....+....
T Consensus       177 ~p~~t~FfDDS~~NI~~ak~  196 (244)
T KOG3109|consen  177 SPRNTYFFDDSERNIQTAKE  196 (244)
T ss_pred             CcCceEEEcCchhhHHHHHh
Confidence             9999999999987754433

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=97.53  E-value=0.00028  Score=65.74  Aligned_cols=131  Identities=11%  Similarity=0.040  Sum_probs=77.3

Q ss_pred             CCCCeEEEEeCCcceeceecCCC-CCCCc-----ee--eeee-c--CeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCC
Q 021254          139 AGLPITLVLDLDETLVHSSFDNC-KDADF-----SF--PIHS-K--MEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAG  206 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~-~~~d~-----~~--~i~~-~--~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas  206 (315)
                      .++++.++||+|||+++++.-.- ....|     .+  .-.+ .  ......+....||+.+||+++. +.++|++-|+.
T Consensus        60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR  139 (237)
T PRK11009         60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR  139 (237)
T ss_pred             CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence            45677999999999999753110 01000     01  0000 0  0112334556677999999995 78999999994


Q ss_pred             ----chhhHHHHHHHhCC-CCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          207 ----QSIYAGQLLDILDP-NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       207 ----~~~YA~~vL~~LDp-~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                          ...+++.+++.++. ...+|...+..+..  .+..-..-+.    ...-+|+|-|+..-+......|+..
T Consensus       140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~----~~~i~I~IGDs~~Di~aA~~AGi~~  207 (237)
T PRK11009        140 TATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLK----KKNIRIFYGDSDNDITAAREAGARG  207 (237)
T ss_pred             CCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHH----hcCCeEEEcCCHHHHHHHHHcCCcE
Confidence                46688999987766 12367655554431  1111111111    2233899999988775555666654

>PLN02954 phosphoserine phosphatase

Probab=97.52  E-value=4.8e-05  Score=68.31  Aligned_cols=93  Identities=11%  Similarity=0.148  Sum_probs=62.1

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCC-CeeeeEEEecc-------------eee-eCCc-ccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVYRDS-------------CVF-ADGE-YLK  243 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~-~~f~~rl~Re~-------------C~~-~~g~-y~K  243 (315)
                      ..++||+.++|+++. +.+.++|-|++.+.+++.+++.++... .+|...+.-+.             |.. .+.. +.+
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~  162 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH  162 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence            457899999999998 579999999999999999999987652 36654433211             100 0111 111


Q ss_pred             cccccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          244 DLTILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       244 DL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      -+..+|  .+++|+|-|++.-......+|+.+
T Consensus       163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~~  192 (224)
T PLN02954        163 IKKKHG--YKTMVMIGDGATDLEARKPGGADL  192 (224)
T ss_pred             HHHHcC--CCceEEEeCCHHHHHhhhcCCCCE
Confidence            122234  368999999999776655544543

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=97.50  E-value=0.00011  Score=67.48  Aligned_cols=97  Identities=12%  Similarity=-0.040  Sum_probs=80.4

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCee-eeEEEecceeeeCC---cccccccccCCC-CCc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFADG---EYLKDLTILGRD-LAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f-~~rl~Re~C~~~~g---~y~KDL~~Lgrd-l~~  254 (315)
                      +...||+.++|++|+ +.+.++|-|++...+++.+++.++..+ +| +.++..+.....++   .|.+-+..+|.. +++
T Consensus        98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~-~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  176 (253)
T TIGR01422        98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG-YRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA  176 (253)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC-CCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence            467899999999998 579999999999999999999998776 54 77777776555444   377888889984 899


Q ss_pred             EEEEECCchhhccCCCCeeeeccc
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +|+|.|++.-......+|+.....
T Consensus       177 ~l~IGDs~~Di~aA~~aGi~~i~v  200 (253)
T TIGR01422       177 CVKVGDTVPDIEEGRNAGMWTVGL  200 (253)
T ss_pred             eEEECCcHHHHHHHHHCCCeEEEE
Confidence            999999999887777888877655

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=97.40  E-value=0.0008  Score=69.37  Aligned_cols=214  Identities=14%  Similarity=0.092  Sum_probs=115.7

Q ss_pred             CCCcccchhhc--------ccccccccccCCCCCCCccCCCCccccccccccccCCCCcccceeeccccc----ccCCCC
Q 021254           29 EDPVCSHEEIN--------FGTIFDLDLRRPCHEGKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSL----LDQGSN   96 (315)
Q Consensus        29 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~a~~q~~~----~~~~~~   96 (315)
                      .|.+|+...-.        .-+..++-.|-.-.+|.-+.+|......+=|.+-+-++-.-...-+..-++    .+.+..
T Consensus        45 ~d~~cs~~qv~l~a~~~~~~v~~k~lg~np~~~~~~~~~~~~~~~l~~g~~l~~v~~~~~~~~~f~~~~~~~~~~~~~~~  124 (526)
T TIGR01663        45 RDRKCSKRQIELQADLEKATVALKQLGVNPCGTGGLELKPGGEGELGHGDLLEIVNGLHPLTLQFEETFNPEPEPDKEKA  124 (526)
T ss_pred             chhhhchhhheeeecccCceEEEEEccCCCcccCceEecCCCeeeecCCCEEEEeccccceeEEeeeccCCCcccccccc
Confidence            47889865433        233445555544567888888888888888877654333322222211111    111100


Q ss_pred             cc--c-CC--cccccccCCchhhhccCCCCCCCCCCCCCCCCCCCCCCCCCeEEEEeCCcceeceecCCCCCCCceeeee
Q 021254           97 MQ--S-CL--GIADEEYYNPYLYFMGWQNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIH  171 (315)
Q Consensus        97 ~~--~-~~--~~~~~~~fdp~~fi~~~~~lp~~~~~~~~~llP~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~  171 (315)
                      .+  + .+  .....+..+... -.+|+.+..+..      .-........+.+.||+||||+......    .|  .  
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~-~~~w~~~~~~~~------~~~~~~~~~~Kia~fD~DGTLi~t~sg~----~~--~--  189 (526)
T TIGR01663       125 EPLSSQDEKRDAEKPEKRDRKG-NPGWENLEKLLI------FTAAGVKGQEKIAGFDLDGTIIKTKSGK----VF--P--  189 (526)
T ss_pred             cccccccccccchhhhhhcccC-CccccccCceEE------EecCCcCccCcEEEEECCCCccccCCCc----cC--C--
Confidence            00  0 00  000001000000 013444433210      0111112456789999999999753210    00  0  


Q ss_pred             ecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch------------hhHHHHHHHhCCCCCeeeeEEEecceeeeC
Q 021254          172 SKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS------------IYAGQLLDILDPNQTLIGQRVYRDSCVFAD  238 (315)
Q Consensus       172 ~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~------------~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~  238 (315)
                        ..... +..+-||+.+.|++|. ..|.|+|+|+...            ..+..+++.++.   .|...+..+.|.+.+
T Consensus       190 --~~~~d-~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi---pfdviia~~~~~~RK  263 (526)
T TIGR01663       190 --KGPDD-WQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV---PFQVFIAIGAGFYRK  263 (526)
T ss_pred             --CCHHH-eeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC---ceEEEEeCCCCCCCC
Confidence              00111 1224699999999999 5799999999776            468888888865   377555566665554


Q ss_pred             C---ccccccccc----CCCCCcEEEEECCch
Q 021254          239 G---EYLKDLTIL----GRDLARIAIVDNTPQ  263 (315)
Q Consensus       239 g---~y~KDL~~L----grdl~~vIIIDDsp~  263 (315)
                      .   .+..-+..+    +.+++++++|-|+..
T Consensus       264 P~pGm~~~a~~~~~~~~~Id~~~S~~VGDaag  295 (526)
T TIGR01663       264 PLTGMWDHLKEEANDGTEIQEDDCFFVGDAAG  295 (526)
T ss_pred             CCHHHHHHHHHhcCcccCCCHHHeEEeCCccc
Confidence            3   333333333    579999999999973

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=97.34  E-value=0.0001  Score=65.62  Aligned_cols=98  Identities=16%  Similarity=0.052  Sum_probs=73.5

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhh--HHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIY--AGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~Y--A~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~  254 (315)
                      +...||+.++|++|+ +.+.++|.|++....  +...+..++.. .+|+.++..+++...+.   .|.+-++.+|.++++
T Consensus        93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~  171 (211)
T TIGR02247        93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE  171 (211)
T ss_pred             cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence            567899999999998 579999999987655  33333333333 37888887666554443   377888899999999


Q ss_pred             EEEEECCchhhccCCCCeeeecccc
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      +++|||++.........|+..-.+.
T Consensus       172 ~l~i~D~~~di~aA~~aG~~~i~v~  196 (211)
T TIGR02247       172 CVFLDDLGSNLKPAAALGITTIKVS  196 (211)
T ss_pred             eEEEcCCHHHHHHHHHcCCEEEEEC
Confidence            9999999998877778888765544

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=97.34  E-value=0.00024  Score=63.49  Aligned_cols=94  Identities=19%  Similarity=0.198  Sum_probs=74.8

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      ...+||+.++|+.++ +.+.++|.|++...++..+++.++..+ +|...+..+.+...+.   .+.+-+..++.++++++
T Consensus        92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  170 (226)
T PRK13222         92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML  170 (226)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence            568999999999999 579999999999999999999998765 6876666555433332   25677778899999999


Q ss_pred             EEECCchhhccCCCCeeee
Q 021254          257 IVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I  275 (315)
                      +|+|++.-.......|++.
T Consensus       171 ~igD~~~Di~~a~~~g~~~  189 (226)
T PRK13222        171 FVGDSRNDIQAARAAGCPS  189 (226)
T ss_pred             EECCCHHHHHHHHHCCCcE
Confidence            9999988776555666643

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=97.30  E-value=0.00022  Score=69.20  Aligned_cols=95  Identities=15%  Similarity=0.126  Sum_probs=67.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecc----------eee--eCCcc-ccccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS----------CVF--ADGEY-LKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~----------C~~--~~g~y-~KDL~  246 (315)
                      +.++||+.++|+.+. ..+.++|.|++...+++.+++.++... .+...+-...          +..  .+... .+-++
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~  258 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ  258 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence            668999999999999 569999999999999999999987754 3433322111          111  11122 23335


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      .+|.++++||.|-|+..-..+-...|+.|-
T Consensus       259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA  288 (322)
T PRK11133        259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA  288 (322)
T ss_pred             HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            679999999999999987765555566554

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=97.27  E-value=0.0004  Score=64.63  Aligned_cols=98  Identities=14%  Similarity=0.026  Sum_probs=78.5

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCC-CCcE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRD-LARI  255 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrd-l~~v  255 (315)
                      +..-||+.++|+.|+ +.+.++|-|++.+..+..+++.+...+-.+..++..+++...+.   .|.+-++.+|.. ++.+
T Consensus       100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~  179 (267)
T PRK13478        100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC  179 (267)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence            467899999999998 67999999999999999999988766522477777777655443   377888889975 6899


Q ss_pred             EEEECCchhhccCCCCeeeeccc
Q 021254          256 AIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      |+|+|++.-+......|+..-..
T Consensus       180 l~IGDs~~Di~aA~~aG~~~i~v  202 (267)
T PRK13478        180 VKVDDTVPGIEEGLNAGMWTVGV  202 (267)
T ss_pred             EEEcCcHHHHHHHHHCCCEEEEE
Confidence            99999998887777778766544

>PRK08238 hypothetical protein; Validated

Probab=97.27  E-value=0.001  Score=67.86  Aligned_cols=90  Identities=13%  Similarity=0.056  Sum_probs=60.0

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc--ccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE--YLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~--y~KDL~~Lgrdl~~vII  257 (315)
                      ...+|++.++|++++ +.+.++|-|++.+.++++++++++.    |+..+..+.....+|.  ...-.+.+|  .+.++.
T Consensus        71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~y  144 (479)
T PRK08238         71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDY  144 (479)
T ss_pred             CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeE
Confidence            347899999999998 7899999999999999999999954    6666665543322221  111112233  245788


Q ss_pred             EECCchhh--ccCCCCeeeec
Q 021254          258 VDNTPQVF--QLQVDNGIPIE  276 (315)
Q Consensus       258 IDDsp~~~--~~q~~NgI~I~  276 (315)
                      +.|+..-.  ...-++.+.|.
T Consensus       145 vGDS~~Dlp~~~~A~~av~Vn  165 (479)
T PRK08238        145 AGNSAADLPVWAAARRAIVVG  165 (479)
T ss_pred             ecCCHHHHHHHHhCCCeEEEC
Confidence            88888633  22345666553

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=97.23  E-value=0.00034  Score=61.81  Aligned_cols=91  Identities=12%  Similarity=0.036  Sum_probs=71.0

Q ss_pred             eeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          182 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       182 ~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      ...||+.++|++|++ .+.++|.|++... +..+++.++..+ +|..++..+++...+..   |.+-++.+|.+++++|+
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~  182 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH  182 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence            567999999999984 6999999998775 477888887765 79888887776655543   67788889999999999


Q ss_pred             EECCc-hhhccCCCCeee
Q 021254          258 VDNTP-QVFQLQVDNGIP  274 (315)
Q Consensus       258 IDDsp-~~~~~q~~NgI~  274 (315)
                      |+|++ .-.......|+.
T Consensus       183 IgD~~~~Di~~A~~aG~~  200 (203)
T TIGR02252       183 IGDSLRNDYQGARAAGWR  200 (203)
T ss_pred             ECCCchHHHHHHHHcCCe
Confidence            99997 445444444443

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=97.22  E-value=0.00025  Score=61.32  Aligned_cols=91  Identities=12%  Similarity=0.097  Sum_probs=71.7

Q ss_pred             eeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          182 RQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       182 ~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      ...||+.++|++|+ +.+.++|-|++.  .+..+++.++... +|+..+..++-...+.   .|.+-++.+|.+++++|+
T Consensus        87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~  163 (185)
T TIGR01990        87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG  163 (185)
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            56799999999998 669999999764  4677899988775 7888877655333333   367888888999999999


Q ss_pred             EECCchhhccCCCCeeee
Q 021254          258 VDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I  275 (315)
                      |+|++.-+.....+|+..
T Consensus       164 vgD~~~di~aA~~aG~~~  181 (185)
T TIGR01990       164 IEDAQAGIEAIKAAGMFA  181 (185)
T ss_pred             EecCHHHHHHHHHcCCEE
Confidence            999998777667777764

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.20  E-value=0.00057  Score=61.01  Aligned_cols=93  Identities=14%  Similarity=0.062  Sum_probs=79.0

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +..-|++.++|+.+.+.|.++|.|++...++...+..++.. .+|+.+++.+.....+.   .|..-++.+|.+++++++
T Consensus        98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~  176 (229)
T COG1011          98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF  176 (229)
T ss_pred             CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence            56789999999999977999999999999999999999855 48999999999887664   378888899999999999


Q ss_pred             EECCchhh-ccCCCCeee
Q 021254          258 VDNTPQVF-QLQVDNGIP  274 (315)
Q Consensus       258 IDDsp~~~-~~q~~NgI~  274 (315)
                      |||+...- .....-|+.
T Consensus       177 VgD~~~~di~gA~~~G~~  194 (229)
T COG1011         177 VGDSLENDILGARALGMK  194 (229)
T ss_pred             ECCChhhhhHHHHhcCcE
Confidence            99999866 444444444

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=97.19  E-value=0.00045  Score=65.49  Aligned_cols=98  Identities=13%  Similarity=0.104  Sum_probs=74.9

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCC--CeeeeEEEecceeeeCC---cccccccccCCCCCc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQ--TLIGQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~--~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~  254 (315)
                      +...||+.++|++++ +.+.++|.|++...++..+++.+.-.+  .+|... ..+.+...+.   .|.+-+..+|.++++
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~  221 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR  221 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence            468899999999998 579999999999999999999773222  123322 4555443333   367778889999999


Q ss_pred             EEEEECCchhhccCCCCeeeecccc
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      +|+|+|++.-+.....+|+.+....
T Consensus       222 ~l~IGDs~~Di~aA~~aG~~~i~v~  246 (286)
T PLN02779        222 CVVVEDSVIGLQAAKAAGMRCIVTK  246 (286)
T ss_pred             EEEEeCCHHhHHHHHHcCCEEEEEc
Confidence            9999999998877777887776553

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.18  E-value=0.00096  Score=56.45  Aligned_cols=73  Identities=18%  Similarity=0.135  Sum_probs=52.6

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHH---------
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAG---------  212 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~---------  212 (315)
                      +.+++||||||+.....     .+.            .....+.+.+.|+++. +.++|+++|+-......         
T Consensus         2 K~i~~DiDGTL~~~~~~-----~y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~   64 (126)
T TIGR01689         2 KRLVMDLDNTITLTENG-----DYA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH   64 (126)
T ss_pred             CEEEEeCCCCcccCCCC-----ccc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence            47899999999764210     000            1236788999999985 78999999999888776         


Q ss_pred             ---HHHHHhCCCCCeeeeEEEec
Q 021254          213 ---QLLDILDPNQTLIGQRVYRD  232 (315)
Q Consensus       213 ---~vL~~LDp~~~~f~~rl~Re  232 (315)
                         .+++.|+..+-.+...+.|.
T Consensus        65 ~~~~t~~wL~k~~ipYd~l~~~k   87 (126)
T TIGR01689        65 TLPIIILWLNQHNVPYDEIYVGK   87 (126)
T ss_pred             hHHHHHHHHHHcCCCCceEEeCC
Confidence               77778877765555555544

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=97.17  E-value=0.00077  Score=58.94  Aligned_cols=94  Identities=15%  Similarity=0.179  Sum_probs=68.0

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC-------------ccccccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG-------------EYLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g-------------~y~KDL~  246 (315)
                      +..+||+.++|+.+. +.+.++|.|++...+++.+++.++... +|...+..++.....+             .+.+-+.
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~  157 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR  157 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence            668999999999998 579999999999999999999998764 6766554332221111             1112234


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      .+|.+++++++|.|+..-...-...|+++
T Consensus       158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~  186 (201)
T TIGR01491       158 ELNPSLTETVAVGDSKNDLPMFEVADISI  186 (201)
T ss_pred             HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence            56888999999999987665544555544

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.17  E-value=0.00066  Score=60.16  Aligned_cols=117  Identities=15%  Similarity=0.070  Sum_probs=74.0

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      +..+.+|+|+||||+........          .+.....+.. |.+  .=++.+. +.++++|-|+.....+..+++.+
T Consensus        19 ~~ikli~~D~Dgtl~~~~i~~~~----------~~~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l   85 (183)
T PRK09484         19 ENIRLLICDVDGVFSDGLIYMGN----------NGEELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL   85 (183)
T ss_pred             hCceEEEEcCCeeeecCEEEEcC----------CCCEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence            35778999999999986321000          0111111221 221  1334444 68999999999999999999999


Q ss_pred             CCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          219 DPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       219 Dp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      .... +|.      .+......+.+-+..+|.+++.+++|-|++.-...-...|+.+.
T Consensus        86 gl~~-~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~  136 (183)
T PRK09484         86 GITH-LYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA  136 (183)
T ss_pred             CCce-eec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence            7654 443      11111123455567789999999999999886655555566543

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=97.10  E-value=0.0011  Score=58.79  Aligned_cols=80  Identities=14%  Similarity=0.140  Sum_probs=66.6

Q ss_pred             CchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEEEE
Q 021254          184 RPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAIVD  259 (315)
Q Consensus       184 RP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vIIID  259 (315)
                      .|+..++|+.|+ +.+.++|.|++...++..+++.++... +|...+..++... +.   .+.+-+..+|.+++++|+|+
T Consensus       108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vG  185 (197)
T TIGR01548       108 LLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVG  185 (197)
T ss_pred             ccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEe
Confidence            445699999998 569999999999999999999998875 8988888776544 43   36777788899999999999


Q ss_pred             CCchhh
Q 021254          260 NTPQVF  265 (315)
Q Consensus       260 Dsp~~~  265 (315)
                      |++.-.
T Consensus       186 D~~~Di  191 (197)
T TIGR01548       186 DTVDDI  191 (197)
T ss_pred             CCHHHH
Confidence            998643

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.06  E-value=0.0012  Score=60.78  Aligned_cols=95  Identities=13%  Similarity=0.030  Sum_probs=67.0

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHH--HHHHHh
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAG--QLLDIL  218 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~--~vL~~L  218 (315)
                      ...++||+||||++...                        .-||+.++|++|. +.+.++|.|++.+..+.  ..++.+
T Consensus         8 ~~~~~~D~dG~l~~~~~------------------------~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~   63 (242)
T TIGR01459         8 YDVFLLDLWGVIIDGNH------------------------TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL   63 (242)
T ss_pred             CCEEEEecccccccCCc------------------------cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence            45789999999998632                        4799999999999 67999999999988777  788888


Q ss_pred             CCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCc
Q 021254          219 DPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP  262 (315)
Q Consensus       219 Dp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp  262 (315)
                      +....+|..++.......  ..+..-++.+|..++++++|-|+.
T Consensus        64 gl~~~~~~~Ii~s~~~~~--~~l~~~~~~~~~~~~~~~~vGd~~  105 (242)
T TIGR01459        64 GINADLPEMIISSGEIAV--QMILESKKRFDIRNGIIYLLGHLE  105 (242)
T ss_pred             CCCccccceEEccHHHHH--HHHHhhhhhccCCCceEEEeCCcc
Confidence            775325776666553221  111122234455667777777755

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.04  E-value=0.00056  Score=62.86  Aligned_cols=95  Identities=14%  Similarity=0.100  Sum_probs=71.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC---CCCCeeeeEEEecceeee-CCcccccccccCCCCCcE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD---PNQTLIGQRVYRDSCVFA-DGEYLKDLTILGRDLARI  255 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD---p~~~~f~~rl~Re~C~~~-~g~y~KDL~~Lgrdl~~v  255 (315)
                      ..+.|++.++|+++. +.+.++|+|+++......+++..+   ... +|+..+....+... ...|.+-++.+|.+++++
T Consensus        94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~  172 (220)
T TIGR01691        94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI  172 (220)
T ss_pred             cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence            457899999999998 689999999999999998888863   322 56554432222111 124788889999999999


Q ss_pred             EEEECCchhhccCCCCeeeec
Q 021254          256 AIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I~  276 (315)
                      ++|+|++.........|+...
T Consensus       173 lfVgDs~~Di~AA~~AG~~ti  193 (220)
T TIGR01691       173 LFLSDIINELDAARKAGLHTG  193 (220)
T ss_pred             EEEeCCHHHHHHHHHcCCEEE
Confidence            999999987766667777653

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PLN02811 hydrolase

Probab=96.99  E-value=0.00081  Score=60.72  Aligned_cols=97  Identities=10%  Similarity=0.078  Sum_probs=73.6

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHH-HHHHhCCCCCeeeeEEEec--ceeeeCC---cccccccccC---C
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQ-LLDILDPNQTLIGQRVYRD--SCVFADG---EYLKDLTILG---R  250 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~-vL~~LDp~~~~f~~rl~Re--~C~~~~g---~y~KDL~~Lg---r  250 (315)
                      +.+.||+.++|+.|+ ..+.++|-|++.+.++.. +.+..... .+|..+++.+  ++...+.   .|.+-+..+|   .
T Consensus        77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~  155 (220)
T PLN02811         77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV  155 (220)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence            446899999999998 579999999998876554 33333333 3788888888  6654443   4677777775   8


Q ss_pred             CCCcEEEEECCchhhccCCCCeeeeccc
Q 021254          251 DLARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       251 dl~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +++++|+|+|++.-.......|++.-..
T Consensus       156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v  183 (220)
T PLN02811        156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV  183 (220)
T ss_pred             CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence            8999999999999887777778777655

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=96.89  E-value=0.0039  Score=56.30  Aligned_cols=122  Identities=13%  Similarity=0.080  Sum_probs=78.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC-CCeeeeE--EEecceeeeCC-------------cccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN-QTLIGQR--VYRDSCVFADG-------------EYLK  243 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~-~~~f~~r--l~Re~C~~~~g-------------~y~K  243 (315)
                      +.++||+.+||+++. +.+.++|.|++...|++++++.+ .. ..++...  +..+.....+.             ...+
T Consensus        73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~  151 (219)
T PRK09552         73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS  151 (219)
T ss_pred             CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence            678999999999998 57999999999999999999987 32 2233222  22221111110             1234


Q ss_pred             cccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCChHHHHHHHHHhhc-------cCCCChHHHHHhhhcC
Q 021254          244 DLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETL-------VGADDVRPIIKQKYGS  313 (315)
Q Consensus       244 DL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~eLl~L~~~L~~L-------~~~~DVR~~l~~~f~~  313 (315)
                      -+..++.+..++|+|.|+..-.......|+.+..      + .   |..+.+..       ....||..+|++.|..
T Consensus       152 ~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~------~-~---l~~~~~~~~~~~~~~~~f~ei~~~l~~~~~~  218 (219)
T PRK09552        152 LIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR------D-F---LITKCEELGIPYTPFETFHDVQTELKHLLEV  218 (219)
T ss_pred             HHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH------H-H---HHHHHHHcCCCccccCCHHHHHHHHHHHhcc
Confidence            4556677888999999999877655566774441      1 2   33343321       2223777777776654

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=96.81  E-value=0.00057  Score=63.13  Aligned_cols=101  Identities=13%  Similarity=0.060  Sum_probs=77.0

Q ss_pred             eEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEE--ecceeeeCC---cccccccccCCCC-
Q 021254          180 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY--RDSCVFADG---EYLKDLTILGRDL-  252 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~--Re~C~~~~g---~y~KDL~~Lgrdl-  252 (315)
                      .++.-||+..++..|. ..-.+.++|++.+.+++..++.+.---..|++...  -..+...+.   .|++-++++|.++ 
T Consensus        90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~  169 (222)
T KOG2914|consen   90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPP  169 (222)
T ss_pred             ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCc
Confidence            3677899999999999 67999999999999999988888633336777766  333332222   3899999999998 


Q ss_pred             CcEEEEECCchhhccCCCCeeeeccccC
Q 021254          253 ARIAIVDNTPQVFQLQVDNGIPIESWFG  280 (315)
Q Consensus       253 ~~vIIIDDsp~~~~~q~~NgI~I~~f~~  280 (315)
                      +++++++|+|........-|.++...-+
T Consensus       170 ~k~lVfeds~~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  170 SKCLVFEDSPVGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             cceEEECCCHHHHHHHHhcCCeEEEecC
Confidence            9999999999987666666655555443

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=96.61  E-value=0.0017  Score=61.44  Aligned_cols=119  Identities=16%  Similarity=0.095  Sum_probs=67.2

Q ss_pred             CCCeEEEEeCCcceeceecC----CCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHH-
Q 021254          140 GLPITLVLDLDETLVHSSFD----NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQ-  213 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~----~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~-  213 (315)
                      .+++.+|||+|||+++.+.-    ......|. +-.|..-....-...-||+.+||+.+. +...++|.|+....+.+. 
T Consensus        73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~-~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T  151 (266)
T TIGR01533        73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFD-PETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT  151 (266)
T ss_pred             CCCCEEEEeCccccccChHHHHHHhcCCCcCC-HHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence            45789999999999987631    00111110 000110011122446799999999997 679999999988766664 


Q ss_pred             --HHHHhCCCCCeeeeEEEecceeeeCCcccccccc--cCCCCCcEEEEECCchhh
Q 021254          214 --LLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTI--LGRDLARIAIVDNTPQVF  265 (315)
Q Consensus       214 --vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~--Lgrdl~~vIIIDDsp~~~  265 (315)
                        .|+.++.....+++.+.|+.- .     -|..++  +...-.=++.|.|...-+
T Consensus       152 ~~~Lkk~Gi~~~~~d~lllr~~~-~-----~K~~rr~~I~~~y~Ivl~vGD~~~Df  201 (266)
T TIGR01533       152 LKNLKRFGFPQADEEHLLLKKDK-S-----SKESRRQKVQKDYEIVLLFGDNLLDF  201 (266)
T ss_pred             HHHHHHcCcCCCCcceEEeCCCC-C-----CcHHHHHHHHhcCCEEEEECCCHHHh
Confidence              444444433234566777531 1     122221  111112277788876655

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=96.58  E-value=0.00061  Score=58.71  Aligned_cols=77  Identities=13%  Similarity=0.032  Sum_probs=65.1

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +..+||+.++|+.      ++|.|++...++..+++.++... +|+.++..+.....++   .|.+-++.+|.+++++++
T Consensus        89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~  161 (175)
T TIGR01493        89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM  161 (175)
T ss_pred             CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence            5578999999993      78999999999999999998765 8988888777655554   378888999999999999


Q ss_pred             EECCchh
Q 021254          258 VDNTPQV  264 (315)
Q Consensus       258 IDDsp~~  264 (315)
                      |+|++..
T Consensus       162 vgD~~~D  168 (175)
T TIGR01493       162 VAAHQWD  168 (175)
T ss_pred             EecChhh
Confidence            9999753

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=96.57  E-value=0.0016  Score=59.54  Aligned_cols=94  Identities=16%  Similarity=0.215  Sum_probs=68.0

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeC---Cc---------cc-cccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD---GE---------YL-KDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~---g~---------y~-KDL~  246 (315)
                      +.++||+.+.+++++ ..+.++|.|+|-..+++++.+.++.+. .+..++-.++-.+..   |.         -+ .=++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~  154 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA  154 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence            788999999999999 569999999999999999999999886 567676655511111   11         11 1123


Q ss_pred             ccCCCCCcEEEEECCchhhcc--CCCCeeee
Q 021254          247 ILGRDLARIAIVDNTPQVFQL--QVDNGIPI  275 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~--q~~NgI~I  275 (315)
                      .+|.++++++.+=|+..-..+  .-++++.+
T Consensus       155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~  185 (212)
T COG0560         155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAV  185 (212)
T ss_pred             HcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence            458889999999998875433  33445444

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.48  E-value=0.0084  Score=55.37  Aligned_cols=59  Identities=24%  Similarity=0.176  Sum_probs=52.1

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      ..+.+++||||||+.+...                       ..|...+.|+++. +...++|-|......+.++++.|.
T Consensus         2 ~~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~   58 (264)
T COG0561           2 MIKLLAFDLDGTLLDSNKT-----------------------ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELG   58 (264)
T ss_pred             CeeEEEEcCCCCccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcC
Confidence            3578999999999998642                       5889999999886 889999999999999999999998


Q ss_pred             CCC
Q 021254          220 PNQ  222 (315)
Q Consensus       220 p~~  222 (315)
                      ..+
T Consensus        59 ~~~   61 (264)
T COG0561          59 LDG   61 (264)
T ss_pred             CCc
Confidence            876

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=96.42  E-value=0.011  Score=51.49  Aligned_cols=104  Identities=21%  Similarity=0.166  Sum_probs=55.8

Q ss_pred             eEEEEeCCcceeceecCCC---CCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch----------
Q 021254          143 ITLVLDLDETLVHSSFDNC---KDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS----------  208 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~---~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~----------  208 (315)
                      |.+.|||||||+.......   ...|              +..+-|++-+-|+++. +.|.|||+|+..-          
T Consensus         1 Kia~fD~DgTLi~~~s~~~f~~~~~D--------------~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~   66 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKKFPKDPDD--------------WKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDL   66 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTTS-SSTCG--------------GEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHH
T ss_pred             CEEEEeCCCCccCCCCCCcCcCCHHH--------------hhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchH
Confidence            4678999999999854211   1112              2335678999999999 5899999998621          


Q ss_pred             ----hhHHHHHHHhCCCCCeeeeEEE-ecceeeeC---Cccc---ccccc-cCCCCCcEEEEECCchh
Q 021254          209 ----IYAGQLLDILDPNQTLIGQRVY-RDSCVFAD---GEYL---KDLTI-LGRDLARIAIVDNTPQV  264 (315)
Q Consensus       209 ----~YA~~vL~~LDp~~~~f~~rl~-Re~C~~~~---g~y~---KDL~~-Lgrdl~~vIIIDDsp~~  264 (315)
                          ...+.+++.++-.   + ..++ ..+..+.+   |++.   +++.. +..|+++.++|=|+..-
T Consensus        67 ~~~~~ki~~il~~l~ip---~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen   67 ENFHEKIENILKELGIP---I-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             HHHHHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred             HHHHHHHHHHHHHcCCc---e-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence                2233455555322   2 2222 22212222   3333   33332 23688999999997543

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=96.24  E-value=0.0092  Score=48.13  Aligned_cols=50  Identities=24%  Similarity=0.188  Sum_probs=37.9

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      ++||+||||++...                        .=||+.+||++|. ....+++.|+++..-...+.+.|
T Consensus         1 ~l~D~dGvl~~g~~------------------------~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L   51 (101)
T PF13344_consen    1 FLFDLDGVLYNGNE------------------------PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL   51 (101)
T ss_dssp             EEEESTTTSEETTE------------------------E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred             CEEeCccEeEeCCC------------------------cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence            58999999998532                        3699999999999 56999999999866555555554

...

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.22  E-value=0.012  Score=54.93  Aligned_cols=58  Identities=19%  Similarity=0.106  Sum_probs=47.9

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+.+..                       ...|...+.|+++. +.+.++|-|......+..+++.++.
T Consensus         4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l   60 (273)
T PRK00192          4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL   60 (273)
T ss_pred             ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence            46899999999998531                       13577889999999 4699999999999999999999876


Q ss_pred             CC
Q 021254          221 NQ  222 (315)
Q Consensus       221 ~~  222 (315)
                      ..
T Consensus        61 ~~   62 (273)
T PRK00192         61 ED   62 (273)
T ss_pred             CC
Confidence            53

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=96.19  E-value=0.015  Score=51.65  Aligned_cols=97  Identities=20%  Similarity=0.206  Sum_probs=64.9

Q ss_pred             CCCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhccc---EEEEEcCCc------
Q 021254          137 PIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMF---DVVIFTAGQ------  207 (315)
Q Consensus       137 ~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~f---EIvIfTas~------  207 (315)
                      .+..+-+.||||+|+||+.....                      ..-|.+.+.+++|.+.|   .|+|.|++.      
T Consensus        36 Lk~~Gik~li~DkDNTL~~~~~~----------------------~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~   93 (168)
T PF09419_consen   36 LKKKGIKALIFDKDNTLTPPYED----------------------EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDP   93 (168)
T ss_pred             hhhcCceEEEEcCCCCCCCCCcC----------------------cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCc
Confidence            44678889999999999865321                      14788889999999655   399999983      


Q ss_pred             -hhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccC-----CCCCcEEEEECCch
Q 021254          208 -SIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILG-----RDLARIAIVDNTPQ  263 (315)
Q Consensus       208 -~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lg-----rdl~~vIIIDDsp~  263 (315)
                       ..-|+.+-+.|+..  ++.|+--..      +.+-+-++.++     ..++++++|-|.-.
T Consensus        94 ~~~~a~~~~~~lgIp--vl~h~~kKP------~~~~~i~~~~~~~~~~~~p~eiavIGDrl~  147 (168)
T PF09419_consen   94 DGERAEALEKALGIP--VLRHRAKKP------GCFREILKYFKCQKVVTSPSEIAVIGDRLF  147 (168)
T ss_pred             cHHHHHHHHHhhCCc--EEEeCCCCC------ccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence             67788888888643  233321111      22222233332     35889999999754

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=96.12  E-value=0.011  Score=52.42  Aligned_cols=54  Identities=26%  Similarity=0.208  Sum_probs=45.8

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +++||||||+++...                       .-|...+.|+++. +...++|.|......+..++..+.-.
T Consensus         1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~   55 (254)
T PF08282_consen    1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID   55 (254)
T ss_dssp             EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred             cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence            689999999996432                       3578889999888 78999999999999999999987644

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=96.06  E-value=0.007  Score=53.63  Aligned_cols=102  Identities=19%  Similarity=0.168  Sum_probs=77.4

Q ss_pred             CCCCCCCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhH
Q 021254          133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYA  211 (315)
Q Consensus       133 lP~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA  211 (315)
                      .|......+.+.+|+|||+|||-=...                      ..-|.+++-+..+. ....++|.|+.++.-+
T Consensus        19 ~~~~L~~~Gikgvi~DlDNTLv~wd~~----------------------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV   76 (175)
T COG2179          19 TPDILKAHGIKGVILDLDNTLVPWDNP----------------------DATPELRAWLAELKEAGIKVVVVSNNKESRV   76 (175)
T ss_pred             CHHHHHHcCCcEEEEeccCceecccCC----------------------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHH
Confidence            344455688999999999999975321                      13688999999999 5699999999999999


Q ss_pred             HHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCch
Q 021254          212 GQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (315)
Q Consensus       212 ~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~  263 (315)
                      ..++..||-.-  +    ++-- .-....+-|.|..++.++++|++|-|.-.
T Consensus        77 ~~~~~~l~v~f--i----~~A~-KP~~~~fr~Al~~m~l~~~~vvmVGDqL~  121 (175)
T COG2179          77 ARAAEKLGVPF--I----YRAK-KPFGRAFRRALKEMNLPPEEVVMVGDQLF  121 (175)
T ss_pred             HhhhhhcCCce--e----eccc-CccHHHHHHHHHHcCCChhHEEEEcchhh
Confidence            99999998763  1    1111 00012367888899999999999999765

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=96.06  E-value=0.0095  Score=53.45  Aligned_cols=126  Identities=21%  Similarity=0.227  Sum_probs=83.7

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc------------h
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ------------S  208 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~------------~  208 (315)
                      .++|+||.||||.--........+              -..+.||+.+-|..+. ..|.+||+|..+            .
T Consensus         5 ~k~lflDRDGtin~d~~~yv~~~~--------------~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~   70 (181)
T COG0241           5 QKALFLDRDGTINIDKGDYVDSLD--------------DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD   70 (181)
T ss_pred             CcEEEEcCCCceecCCCcccCcHH--------------HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence            678999999999874321111000              1236899999999997 579999999943            2


Q ss_pred             hhHHHHHHHhCCCCCeeeeEEEecc-----eeeeC---CcccccccccCCCCCcEEEEECCchhhccCCCC---eeeecc
Q 021254          209 IYAGQLLDILDPNQTLIGQRVYRDS-----CVFAD---GEYLKDLTILGRDLARIAIVDNTPQVFQLQVDN---GIPIES  277 (315)
Q Consensus       209 ~YA~~vL~~LDp~~~~f~~rl~Re~-----C~~~~---g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~N---gI~I~~  277 (315)
                      .+-..+++.|--.+.-|+.++++-|     |.+.+   |.+..-+...+.|+++.++|=|+..-.......   ++.+..
T Consensus        71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~  150 (181)
T COG0241          71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT  150 (181)
T ss_pred             HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence            3334466666666667899998533     66655   346666677789999999999996644222222   555555


Q ss_pred             ccCC
Q 021254          278 WFGD  281 (315)
Q Consensus       278 f~~d  281 (315)
                      |.+.
T Consensus       151 ~~~~  154 (181)
T COG0241         151 GIGV  154 (181)
T ss_pred             Cccc
Confidence            5543

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.06  E-value=0.017  Score=51.68  Aligned_cols=57  Identities=14%  Similarity=0.123  Sum_probs=47.5

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+....                       ...|...+-|+++. +...++|-|......+..+++.++..
T Consensus         2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~   58 (215)
T TIGR01487         2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS   58 (215)
T ss_pred             cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence            4789999999997421                       14678888899998 56999999999999999999999876


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        59 ~   59 (215)
T TIGR01487        59 G   59 (215)
T ss_pred             C
Confidence            4

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.04  E-value=0.012  Score=51.94  Aligned_cols=115  Identities=12%  Similarity=0.055  Sum_probs=74.6

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHh-hcccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAV-ASMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l-~~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      .-+.+|||.||+|-.-+..-..          .+.... -+..|-+.-  ++.| .+.+.++|.|+....++..+++.+.
T Consensus         6 ~i~~~v~d~dGv~tdg~~~~~~----------~g~~~~-~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~~~~~l~~lg   72 (169)
T TIGR02726         6 NIKLVILDVDGVMTDGRIVIND----------EGIESR-NFDIKDGMG--VIVLQLCGIDVAIITSKKSGAVRHRAEELK   72 (169)
T ss_pred             cCeEEEEeCceeeECCeEEEcC----------CCcEEE-EEecchHHH--HHHHHHCCCEEEEEECCCcHHHHHHHHHCC
Confidence            3678999999999987532111          111111 122344432  2233 3679999999999999999999998


Q ss_pred             CCCCeeeeEEEecceeeeC-CcccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          220 PNQTLIGQRVYRDSCVFAD-GEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       220 p~~~~f~~rl~Re~C~~~~-g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      ... +|...       ..+ ..+..-+..+|.++++++.|.|++.-.......|+.+-
T Consensus        73 i~~-~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a  122 (169)
T TIGR02726        73 IKR-FHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA  122 (169)
T ss_pred             CcE-EEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence            764 56532       111 13455566779999999999999986654444554443

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=95.99  E-value=0.02  Score=53.42  Aligned_cols=59  Identities=19%  Similarity=0.175  Sum_probs=47.2

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      +.++.+++||||||+++...                       .-|-..+-|+++. +...++|.|......+..+++.+
T Consensus         5 ~~~~lI~~DlDGTLL~~~~~-----------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l   61 (271)
T PRK03669          5 QDPLLIFTDLDGTLLDSHTY-----------------------DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL   61 (271)
T ss_pred             CCCeEEEEeCccCCcCCCCc-----------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence            45778999999999986321                       2345667788887 67999999999999999999999


Q ss_pred             CCC
Q 021254          219 DPN  221 (315)
Q Consensus       219 Dp~  221 (315)
                      +..
T Consensus        62 ~~~   64 (271)
T PRK03669         62 GLQ   64 (271)
T ss_pred             CCC
Confidence            764

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=95.89  E-value=0.026  Score=51.85  Aligned_cols=58  Identities=21%  Similarity=0.206  Sum_probs=44.0

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+.+...                       ..|...+-|+++. +...++|-|......+..+++.++.
T Consensus         3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~   59 (272)
T PRK10530          3 YRVIALDLDGTLLTPKKT-----------------------ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL   59 (272)
T ss_pred             ccEEEEeCCCceECCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence            468899999999986421                       3455667777777 5688888888888888888888876


Q ss_pred             CC
Q 021254          221 NQ  222 (315)
Q Consensus       221 ~~  222 (315)
                      ..
T Consensus        60 ~~   61 (272)
T PRK10530         60 DT   61 (272)
T ss_pred             CC
Confidence            53

>PTZ00445 p36-lilke protein; Provisional

Probab=95.89  E-value=0.012  Score=54.23  Aligned_cols=132  Identities=11%  Similarity=0.090  Sum_probs=80.1

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhh-------
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIY-------  210 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~Y-------  210 (315)
                      ..+-+.+++|||.|||..-.-...+++        +....+.-..||.+..++++|. ..+.|+|-|-+.+..       
T Consensus        40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~--------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~  111 (219)
T PTZ00445         40 ECGIKVIASDFDLTMITKHSGGYIDPD--------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRP  111 (219)
T ss_pred             HcCCeEEEecchhhhhhhhcccccCCC--------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCc
Confidence            467889999999999873211111110        0011223447999999999998 579999999988754       


Q ss_pred             --------HHHHHHHhCCCCCeeeeEE------Eecceee-----eC---Cc--c--cccccccCCCCCcEEEEECCchh
Q 021254          211 --------AGQLLDILDPNQTLIGQRV------YRDSCVF-----AD---GE--Y--LKDLTILGRDLARIAIVDNTPQV  264 (315)
Q Consensus       211 --------A~~vL~~LDp~~~~f~~rl------~Re~C~~-----~~---g~--y--~KDL~~Lgrdl~~vIIIDDsp~~  264 (315)
                              +...|+.=.-+- -+..++      +.+.-.+     .+   +.  |  .+-++..|.+++.+++|||++..
T Consensus       112 ~~Isg~~li~~~lk~s~~~~-~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~N  190 (219)
T PTZ00445        112 RYISGDRMVEAALKKSKCDF-KIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNN  190 (219)
T ss_pred             ceechHHHHHHHHHhcCccc-eeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHH
Confidence                    444554322221 111111      1221111     11   11  3  44456669999999999999998


Q ss_pred             hccCCCCeeeecccc
Q 021254          265 FQLQVDNGIPIESWF  279 (315)
Q Consensus       265 ~~~q~~NgI~I~~f~  279 (315)
                      +.....-|+..--+.
T Consensus       191 VeaA~~lGi~ai~f~  205 (219)
T PTZ00445        191 CKNALKEGYIALHVT  205 (219)
T ss_pred             HHHHHHCCCEEEEcC
Confidence            876666676665554

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=95.85  E-value=0.0057  Score=56.05  Aligned_cols=89  Identities=12%  Similarity=0.090  Sum_probs=66.7

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +..-||+.++|++|++.|.++|.|++...     ++..+..+ +|+.++..+.....+.   .|.+-++.+|.+++++++
T Consensus       112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~-~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~  185 (238)
T PRK10748        112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGD-YFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH  185 (238)
T ss_pred             CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHH-hhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence            44559999999999988999999998765     35555543 7888887666544443   367778889999999999


Q ss_pred             EECCc-hhhccCCCCeeee
Q 021254          258 VDNTP-QVFQLQVDNGIPI  275 (315)
Q Consensus       258 IDDsp-~~~~~q~~NgI~I  275 (315)
                      |.|++ .-......+|+..
T Consensus       186 VGD~~~~Di~~A~~aG~~~  204 (238)
T PRK10748        186 VGDDLTTDVAGAIRCGMQA  204 (238)
T ss_pred             EcCCcHHHHHHHHHCCCeE
Confidence            99995 5554555666665

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=95.85  E-value=0.021  Score=52.70  Aligned_cols=57  Identities=19%  Similarity=0.187  Sum_probs=46.7

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+++...                       .-|...+.|+++. +...++|-|......+..+++.++.
T Consensus         3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   59 (270)
T PRK10513          3 IKLIAIDMDGTLLLPDHT-----------------------ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM   59 (270)
T ss_pred             eEEEEEecCCcCcCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence            467899999999986321                       3566778888888 5699999999999999999999876


Q ss_pred             C
Q 021254          221 N  221 (315)
Q Consensus       221 ~  221 (315)
                      .
T Consensus        60 ~   60 (270)
T PRK10513         60 E   60 (270)
T ss_pred             C
Confidence            5

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=95.79  E-value=0.031  Score=50.13  Aligned_cols=58  Identities=10%  Similarity=0.091  Sum_probs=47.0

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+.+...                       ..|...+-|+++. +...++|-|......+.++++.+..
T Consensus         3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   59 (230)
T PRK01158          3 IKAIAIDIDGTITDKDRR-----------------------LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGT   59 (230)
T ss_pred             eeEEEEecCCCcCCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence            367899999999975321                       4677888888888 5689999999999999999999876


Q ss_pred             CC
Q 021254          221 NQ  222 (315)
Q Consensus       221 ~~  222 (315)
                      ..
T Consensus        60 ~~   61 (230)
T PRK01158         60 SG   61 (230)
T ss_pred             CC
Confidence            64

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=95.73  E-value=0.024  Score=51.01  Aligned_cols=94  Identities=6%  Similarity=0.043  Sum_probs=62.2

Q ss_pred             eEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEE--ecceeeeCCc-------------ccc
Q 021254          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY--RDSCVFADGE-------------YLK  243 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~--Re~C~~~~g~-------------y~K  243 (315)
                      .+.+|||+.+||+.+.+ .+.++|.|++...+++++++.+.+...++..++.  .+........             -.+
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~  147 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS  147 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence            37899999999999995 6999999999999999999998554333332222  1111111110             012


Q ss_pred             cccccCCCCCcEEEEECCchhhccCCCCee
Q 021254          244 DLTILGRDLARIAIVDNTPQVFQLQVDNGI  273 (315)
Q Consensus       244 DL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI  273 (315)
                      -+..++...+++|.|-|+..-+......++
T Consensus       148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence            233445567889999999987654444444

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=95.59  E-value=0.033  Score=51.72  Aligned_cols=57  Identities=14%  Similarity=0.118  Sum_probs=44.0

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+.+...                       .-|...+-|+++. +...++|-|......+.++++.++..
T Consensus         3 kli~~DlDGTLl~~~~~-----------------------i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   59 (272)
T PRK15126          3 RLAAFDMDGTLLMPDHH-----------------------LGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD   59 (272)
T ss_pred             cEEEEeCCCcCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence            57899999999986321                       3566677788887 56888888888888888888888765


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        60 ~   60 (272)
T PRK15126         60 A   60 (272)
T ss_pred             C
Confidence            4

>PRK10976 putative hydrolase; Provisional

Probab=95.57  E-value=0.033  Score=51.37  Aligned_cols=57  Identities=25%  Similarity=0.322  Sum_probs=42.8

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+++...                       .-|...+-|+++. +...++|-|.-....+.++++.++..
T Consensus         3 kli~~DlDGTLl~~~~~-----------------------is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   59 (266)
T PRK10976          3 QVVASDLDGTLLSPDHT-----------------------LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK   59 (266)
T ss_pred             eEEEEeCCCCCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence            57899999999987421                       3455667777777 56888888888888888888887665


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        60 ~   60 (266)
T PRK10976         60 S   60 (266)
T ss_pred             C
Confidence            3

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=95.57  E-value=0.031  Score=51.20  Aligned_cols=53  Identities=19%  Similarity=0.202  Sum_probs=43.6

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +++||||||++...                        .-|...++|+++. +...+++.|..+...+..+++.++..
T Consensus         2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~   55 (225)
T TIGR02461         2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE   55 (225)
T ss_pred             EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            68899999999421                        2356889999999 56999999999999888999988754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=95.56  E-value=0.032  Score=51.25  Aligned_cols=55  Identities=22%  Similarity=0.250  Sum_probs=44.4

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCC
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQ  222 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~  222 (315)
                      +++||||||+.....                       ..|...+.|+++. +...++|-|......+..+++.+....
T Consensus         2 i~~DlDGTLl~~~~~-----------------------i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~   57 (256)
T TIGR00099         2 IFIDLDGTLLNDDHT-----------------------ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT   57 (256)
T ss_pred             EEEeCCCCCCCCCCc-----------------------cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence            789999999986321                       3567788888888 569999999999998888988887653

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=95.44  E-value=0.037  Score=49.58  Aligned_cols=54  Identities=20%  Similarity=0.163  Sum_probs=43.8

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +++||||||+.+...                       .-|-..+.|+.+. +...++|.|......+..+++.+...
T Consensus         2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463         2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            789999999986321                       1223778999988 56999999999999999999998754

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=95.34  E-value=0.052  Score=51.81  Aligned_cols=105  Identities=16%  Similarity=0.241  Sum_probs=68.4

Q ss_pred             eEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC---CCeeeeEEEecceeeeCC---c----ccc-----
Q 021254          180 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN---QTLIGQRVYRDSCVFADG---E----YLK-----  243 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~---~~~f~~rl~Re~C~~~~g---~----y~K-----  243 (315)
                      -+.+|||+.+|+++|. ....++|+|+|...+++.+++.++-.   ...++.++--+......|   .    +.|     
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~  198 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA  198 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence            3778999999999998 56999999999999999999986542   234455543322111111   1    122     


Q ss_pred             --cccccC--CCCCcEEEEECCchhhcc-----CCCCeeeeccccCCCCCh
Q 021254          244 --DLTILG--RDLARIAIVDNTPQVFQL-----QVDNGIPIESWFGDPSDS  285 (315)
Q Consensus       244 --DL~~Lg--rdl~~vIIIDDsp~~~~~-----q~~NgI~I~~f~~d~~D~  285 (315)
                        ..+.++  .+.++||+|.|+..-..+     +.+|.|.| +|-.+.-+.
T Consensus       199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~  248 (277)
T TIGR01544       199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE  248 (277)
T ss_pred             HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence              222345  788999999999985422     23455554 455554444

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=95.25  E-value=0.021  Score=58.15  Aligned_cols=131  Identities=15%  Similarity=0.133  Sum_probs=76.1

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecC-eeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKM-EVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~-~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~  216 (315)
                      ...+++||||||+||+--..-.-.    .-.+.... .....|    --+++|+..+. +.+=++|.|-....-|..+..
T Consensus       219 g~~kK~LVLDLDNTLWGGVIGedG----v~GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~  290 (574)
T COG3882         219 GKSKKALVLDLDNTLWGGVIGEDG----VDGIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR  290 (574)
T ss_pred             CcccceEEEecCCccccccccccc----ccceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence            467889999999999987532110    00111110 011111    12567777777 678899999999999988876


Q ss_pred             HhCCCCCeeeeE-EEecceeee-C-CcccccccccCCCCCcEEEEECCchhhccCCCCe-eeecccc
Q 021254          217 ILDPNQTLIGQR-VYRDSCVFA-D-GEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNG-IPIESWF  279 (315)
Q Consensus       217 ~LDp~~~~f~~r-l~Re~C~~~-~-g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~Ng-I~I~~f~  279 (315)
                      .. |+- +++.- +..-.|... + .+..|-..+|+..+.-.|+|||+|.....-..++ +.|..+-
T Consensus       291 kh-p~M-iLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~  355 (574)
T COG3882         291 KH-PDM-ILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFP  355 (574)
T ss_pred             hC-CCe-EeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCC
Confidence            54 221 11100 001112211 2 2456777889999999999999998764332222 4455443

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=95.03  E-value=0.057  Score=48.19  Aligned_cols=54  Identities=17%  Similarity=0.182  Sum_probs=42.5

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +++||||||+++...                       ..|-..+-|+++. +...+++-|......+..+++.++..
T Consensus         1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~   55 (225)
T TIGR01482         1 IASDIDGTLTDPNRA-----------------------INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP   55 (225)
T ss_pred             CeEeccCccCCCCcc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence            579999999986421                       3566677788887 56899999999988888888888743

catalyze the same reaction as SPP.

>PRK10444 UMP phosphatase; Provisional

Probab=94.97  E-value=0.049  Score=50.80  Aligned_cols=53  Identities=21%  Similarity=0.287  Sum_probs=44.4

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +.+++|+||||++...                        .=|++.++|+++. +...+++.|+....-+..+.+.|.
T Consensus         2 ~~v~~DlDGtL~~~~~------------------------~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~   55 (248)
T PRK10444          2 KNVICDIDGVLMHDNV------------------------AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA   55 (248)
T ss_pred             cEEEEeCCCceEeCCe------------------------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence            4689999999999741                        3689999999999 579999999999887777777764

>smart00775 LNS2 LNS2 domain

Probab=94.86  E-value=0.062  Score=46.73  Aligned_cols=62  Identities=18%  Similarity=0.244  Sum_probs=42.4

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHH---HHHHHh
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAG---QLLDIL  218 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~---~vL~~L  218 (315)
                      +++|+||||+.+.....     .... + +  ..   ...|++.++++++. +.+.+++.|+.....+.   +.++.+
T Consensus         2 VisDIDGTL~~sd~~~~-----~~~~-~-~--~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~   67 (157)
T smart00775        2 VISDIDGTITKSDVLGH-----VVPI-I-G--KD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI   67 (157)
T ss_pred             EEEecCCCCcccccccc-----cccc-c-c--cC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence            78999999998742100     0000 0 0  01   24799999999999 57999999998877774   666664

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=94.76  E-value=0.058  Score=47.66  Aligned_cols=52  Identities=29%  Similarity=0.288  Sum_probs=43.0

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHh
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      +++|+||||+.+...                      ...|.+.+.|+++.+ ...++|-|......+..+++.+
T Consensus         2 i~~D~DgTL~~~~~~----------------------~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~   54 (204)
T TIGR01484         2 LFFDLDGTLLDPNAH----------------------ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL   54 (204)
T ss_pred             EEEeCcCCCcCCCCC----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence            789999999985210                      146889999999995 4899999999999999999875

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=94.71  E-value=0.095  Score=44.79  Aligned_cols=84  Identities=20%  Similarity=0.273  Sum_probs=57.8

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC--------------ccccc-
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG--------------EYLKD-  244 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g--------------~y~KD-  244 (315)
                      +..+||+.++|+.+. ..+.++|.|++...+++.+++.++... +|...+.-+......|              ..++. 
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~  150 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL  150 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence            567999999999998 569999999999999999999997764 6665554321111011              11122 


Q ss_pred             ccccCCCCCcEEEEECCchhh
Q 021254          245 LTILGRDLARIAIVDNTPQVF  265 (315)
Q Consensus       245 L~~Lgrdl~~vIIIDDsp~~~  265 (315)
                      +..+|.++++++.|-|+..-.
T Consensus       151 ~~~~~~~~~~~~~iGDs~~D~  171 (177)
T TIGR01488       151 LEESKITLKKIIAVGDSVNDL  171 (177)
T ss_pred             HHHhCCCHHHEEEEeCCHHHH
Confidence            223356677888888877543

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PTZ00174 phosphomannomutase; Provisional

Probab=94.64  E-value=0.073  Score=49.12  Aligned_cols=53  Identities=15%  Similarity=0.125  Sum_probs=39.7

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHH
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~  216 (315)
                      +.+.+++||||||+++...                       .-|...+-|+++. +...++|-|.....-+...+.
T Consensus         4 ~~klia~DlDGTLL~~~~~-----------------------is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~   57 (247)
T PTZ00174          4 KKTILLFDVDGTLTKPRNP-----------------------ITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG   57 (247)
T ss_pred             CCeEEEEECcCCCcCCCCC-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence            3578999999999987532                       3567778888888 569999999877665555444

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=94.59  E-value=0.093  Score=48.38  Aligned_cols=54  Identities=20%  Similarity=0.100  Sum_probs=43.7

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +++||||||++....                       ..+...+.++++.+ ...+++-|......+..+++.++..
T Consensus         2 i~~DlDGTll~~~~~-----------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~   56 (256)
T TIGR01486         2 IFTDLDGTLLDPHGY-----------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE   56 (256)
T ss_pred             EEEcCCCCCcCCCCc-----------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            789999999987421                       13357899999984 6999999999999999999998754

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=94.35  E-value=0.059  Score=50.57  Aligned_cols=138  Identities=13%  Similarity=0.137  Sum_probs=85.0

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCce---e-ee-------------eecC-----eeeeeeEeeCchHHHHHHHhh-cc
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFS---F-PI-------------HSKM-----EVQTVFVRQRPYLHMFLEAVA-SM  197 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~---~-~i-------------~~~~-----~~~~~yV~lRP~l~eFL~~l~-~~  197 (315)
                      ....||||+|+||+-+. .....+.+.   + .+             .+..     ....-+...-|.+-++++.++ +.
T Consensus        19 ~~tLvvfDiDdTLi~~~-~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~   97 (252)
T PF11019_consen   19 QDTLVVFDIDDTLITPK-QPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKG   97 (252)
T ss_pred             CCeEEEEEcchhhhcCc-cccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCC
Confidence            56789999999999876 232222110   0 00             0000     011223556799999999999 67


Q ss_pred             cEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecc---------------eeeeCC-----------cccccccccCCC
Q 021254          198 FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS---------------CVFADG-----------EYLKDLTILGRD  251 (315)
Q Consensus       198 fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~---------------C~~~~g-----------~y~KDL~~Lgrd  251 (315)
                      ..++..|+....+...-++.|-.-|--|+...+++.               -.+.+|           ....=|..+|..
T Consensus        98 ~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~  177 (252)
T PF11019_consen   98 IPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGEVLKYFLDKINQS  177 (252)
T ss_pred             CcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHHHHHHHHHHcCCC
Confidence            999999999999999888886332222222211111               111122           123445567999


Q ss_pred             CCcEEEEECCchhh----ccCCCCeeeecccc
Q 021254          252 LARIAIVDNTPQVF----QLQVDNGIPIESWF  279 (315)
Q Consensus       252 l~~vIIIDDsp~~~----~~q~~NgI~I~~f~  279 (315)
                      ++++|+|||+....    ......+|..-+++
T Consensus       178 pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~  209 (252)
T PF11019_consen  178 PKKIIFIDDNKENLKSVEKACKKSGIDFIGFH  209 (252)
T ss_pred             CCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEE
Confidence            99999999999854    22344788877774

The function is not known.

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=94.28  E-value=0.086  Score=45.85  Aligned_cols=87  Identities=17%  Similarity=0.278  Sum_probs=53.3

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhh--HHHHHHHhCCCCCee--eeEEEecceeeeCCcccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIY--AGQLLDILDPNQTLI--GQRVYRDSCVFADGEYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~Y--A~~vL~~LDp~~~~f--~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vI  256 (315)
                      ...-||+++.+++|-++|+|+|-||++..+  ...-.+.|--.-.++  ++.+++..         |.+  +.    -=|
T Consensus        67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn---------Kni--vk----aDi  131 (180)
T COG4502          67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN---------KNI--VK----ADI  131 (180)
T ss_pred             cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC---------CCe--EE----eeE
Confidence            445799999999999999999999995443  333333332111111  12222221         221  11    137


Q ss_pred             EEECCchhhccCCCCeeeeccccCCC
Q 021254          257 IVDNTPQVFQLQVDNGIPIESWFGDP  282 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f~~d~  282 (315)
                      +|||.|........|-|....-....
T Consensus       132 lIDDnp~nLE~F~G~kIlFdA~HN~n  157 (180)
T COG4502         132 LIDDNPLNLENFKGNKILFDAHHNKN  157 (180)
T ss_pred             EecCCchhhhhccCceEEEecccccC
Confidence            89999998877777877766655443

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=94.20  E-value=0.075  Score=46.71  Aligned_cols=84  Identities=18%  Similarity=0.194  Sum_probs=58.6

Q ss_pred             eeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEe-cceeee---CCc----------cccccc
Q 021254          182 RQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYR-DSCVFA---DGE----------YLKDLT  246 (315)
Q Consensus       182 ~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~R-e~C~~~---~g~----------y~KDL~  246 (315)
                      ..+|++.++|+++. +.+.++|-|++...+++.+++.++-.. +|..++.. ++-.+.   .|.          ...-+.
T Consensus        87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~  165 (202)
T TIGR01490        87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA  165 (202)
T ss_pred             hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence            47999999999998 579999999999999999999998775 67664442 210111   010          111123


Q ss_pred             ccCCCCCcEEEEECCchhhc
Q 021254          247 ILGRDLARIAIVDNTPQVFQ  266 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~  266 (315)
                      ..+.++++++.+-|++.-..
T Consensus       166 ~~~~~~~~~~~~gDs~~D~~  185 (202)
T TIGR01490       166 EEQIDLKDSYAYGDSISDLP  185 (202)
T ss_pred             HcCCCHHHcEeeeCCcccHH
Confidence            34677788888888887553

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=94.18  E-value=0.14  Score=49.45  Aligned_cols=57  Identities=16%  Similarity=0.155  Sum_probs=45.1

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+++..                     |  .-+-+.+-|++|. +...+++.|+-+..-+..+.+.|...
T Consensus         2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~   58 (302)
T PRK12702          2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE   58 (302)
T ss_pred             cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence            5788899999998642                     1  2344778889998 56999999999988888899998765


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        59 ~   59 (302)
T PRK12702         59 H   59 (302)
T ss_pred             C
Confidence            3

>PLN02645 phosphoglycolate phosphatase

Probab=94.18  E-value=0.089  Score=50.46  Aligned_cols=54  Identities=13%  Similarity=0.010  Sum_probs=42.8

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      +-+.++||+||||++...                        .=||+.++|+++. +...+++-|+........+++.|
T Consensus        27 ~~~~~~~D~DGtl~~~~~------------------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l   81 (311)
T PLN02645         27 SVETFIFDCDGVIWKGDK------------------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF   81 (311)
T ss_pred             hCCEEEEeCcCCeEeCCc------------------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence            456899999999998631                        1399999999998 68999999998866666666554

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=94.11  E-value=0.12  Score=48.62  Aligned_cols=61  Identities=15%  Similarity=0.058  Sum_probs=44.2

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHH
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~  217 (315)
                      .++..+++|+||||+.....+..                  ...-|.+.+-|+.|++  ...++|-|.....-+..++..
T Consensus        12 ~~~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~   73 (266)
T PRK10187         12 SANYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKP   73 (266)
T ss_pred             CCCEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCc
Confidence            44688999999999986432211                  0135788888888875  578888888888888777755


Q ss_pred             h
Q 021254          218 L  218 (315)
Q Consensus       218 L  218 (315)
                      +
T Consensus        74 ~   74 (266)
T PRK10187         74 Y   74 (266)
T ss_pred             c
Confidence            4

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=93.95  E-value=0.1  Score=48.74  Aligned_cols=55  Identities=16%  Similarity=0.111  Sum_probs=39.0

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHH
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      +.++||+||||++..... .                   ..=|++.++|+++. +...+++.|..+..-...+.+.
T Consensus         2 k~i~~D~DGtl~~~~~~~-~-------------------~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~   57 (257)
T TIGR01458         2 KGVLLDISGVLYISDAKS-G-------------------VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLER   57 (257)
T ss_pred             CEEEEeCCCeEEeCCCcc-c-------------------CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence            478999999999874200 0                   03589999999999 5799999998765543333333

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=93.80  E-value=0.23  Score=52.83  Aligned_cols=60  Identities=15%  Similarity=0.056  Sum_probs=46.8

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      ..+++.+++||||||+++..                     ++  -+...+-|+++. +...+++.|.-+...+..+++.
T Consensus       413 ~~~~KLIfsDLDGTLLd~d~---------------------~i--~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~  469 (694)
T PRK14502        413 GQFKKIVYTDLDGTLLNPLT---------------------YS--YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE  469 (694)
T ss_pred             CceeeEEEEECcCCCcCCCC---------------------cc--CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence            37788889999999998742                     11  123456788887 5699999999999999999999


Q ss_pred             hCCC
Q 021254          218 LDPN  221 (315)
Q Consensus       218 LDp~  221 (315)
                      ++..
T Consensus       470 Lgl~  473 (694)
T PRK14502        470 LGIK  473 (694)
T ss_pred             cCCC
Confidence            8754

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=93.78  E-value=0.12  Score=48.59  Aligned_cols=43  Identities=16%  Similarity=0.121  Sum_probs=34.5

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchh
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSI  209 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~  209 (315)
                      ..+++|+||||++...                        .-|++.++|+++. +...+++.|+.+..
T Consensus         3 ~~~~~D~DGtl~~~~~------------------------~~~ga~e~l~~L~~~g~~~~~~Tnns~~   46 (279)
T TIGR01452         3 QGFIFDCDGVLWLGER------------------------VVPGAPELLDRLARAGKAALFVTNNSTK   46 (279)
T ss_pred             cEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence            4788999999988631                        3588999999999 57899999986543

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=93.74  E-value=0.099  Score=50.39  Aligned_cols=53  Identities=15%  Similarity=0.189  Sum_probs=41.7

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-----ccEEEEEcCCc----hhhHHH
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-----MFDVVIFTAGQ----SIYAGQ  213 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-----~fEIvIfTas~----~~YA~~  213 (315)
                      +.++||+||||+++..                        .-|++.++++.+..     ...+++.|+..    +.+++.
T Consensus         1 ~~~ifD~DGvL~~g~~------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~   56 (321)
T TIGR01456         1 FGFAFDIDGVLFRGKK------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE   56 (321)
T ss_pred             CEEEEeCcCceECCcc------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence            3689999999999853                        36899999999995     78899999775    456666


Q ss_pred             HHHHhC
Q 021254          214 LLDILD  219 (315)
Q Consensus       214 vL~~LD  219 (315)
                      +.+.++
T Consensus        57 l~~~lG   62 (321)
T TIGR01456        57 ISSLLG   62 (321)
T ss_pred             HHHHcC
Confidence            656554

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PLN02423 phosphomannomutase

Probab=93.51  E-value=0.16  Score=47.08  Aligned_cols=55  Identities=15%  Similarity=0.256  Sum_probs=38.1

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhC
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +.+..+++||||||+.+...                       .-|...+.|++|.+...+++.|....   ..+.+.+.
T Consensus         5 ~~~~i~~~D~DGTLl~~~~~-----------------------i~~~~~~ai~~l~~~i~fviaTGR~~---~~~~~~~~   58 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRKE-----------------------ATPEMLEFMKELRKVVTVGVVGGSDL---SKISEQLG   58 (245)
T ss_pred             ccceEEEEeccCCCcCCCCc-----------------------CCHHHHHHHHHHHhCCEEEEECCcCH---HHHHHHhc
Confidence            34556669999999987432                       35777888999997788888887633   34555554


Q ss_pred             C
Q 021254          220 P  220 (315)
Q Consensus       220 p  220 (315)
                      +
T Consensus        59 ~   59 (245)
T PLN02423         59 K   59 (245)
T ss_pred             c
Confidence            4

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=93.38  E-value=0.14  Score=46.35  Aligned_cols=82  Identities=15%  Similarity=0.128  Sum_probs=57.7

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC----------cccccccccCC
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG----------EYLKDLTILGR  250 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g----------~y~KDL~~Lgr  250 (315)
                      +.++||+.+||+++.+.+.++|-|++...++.++++.++.+. +|..++--++.....|          ..++-+...| 
T Consensus        67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~-  144 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY-  144 (203)
T ss_pred             CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC-
Confidence            568999999999999778999999999999999999998875 6765544332111111          1233333333 


Q ss_pred             CCCcEEEEECCchhhc
Q 021254          251 DLARIAIVDNTPQVFQ  266 (315)
Q Consensus       251 dl~~vIIIDDsp~~~~  266 (315)
                        .+++.|-|+..-..
T Consensus       145 --~~~v~vGDs~nDl~  158 (203)
T TIGR02137       145 --YRVIAAGDSYNDTT  158 (203)
T ss_pred             --CCEEEEeCCHHHHH
Confidence              36889988887543

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=93.13  E-value=0.13  Score=48.03  Aligned_cols=49  Identities=16%  Similarity=0.288  Sum_probs=41.4

Q ss_pred             EeeCchHHHHHHHhh---cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEE
Q 021254          181 VRQRPYLHMFLEAVA---SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY  230 (315)
Q Consensus       181 V~lRP~l~eFL~~l~---~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~  230 (315)
                      +..-||+.+|++.++   ..++++|-|-|...|.+.+|++-+... +|+.++.
T Consensus        70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~T  121 (234)
T PF06888_consen   70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFT  121 (234)
T ss_pred             CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEe
Confidence            677899999999994   479999999999999999999988764 5555444

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=92.94  E-value=0.21  Score=46.31  Aligned_cols=54  Identities=17%  Similarity=0.233  Sum_probs=38.0

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc---hhhHHHHHHHh
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ---SIYAGQLLDIL  218 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~---~~YA~~vL~~L  218 (315)
                      ..+++|+||||+....                        .=|++.++|+++. +...+++.|..+   ..-....++.+
T Consensus         2 ~~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~   57 (249)
T TIGR01457         2 KGYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF   57 (249)
T ss_pred             CEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence            3789999999998632                        2368899999998 679999999633   33333444545


Q ss_pred             CC
Q 021254          219 DP  220 (315)
Q Consensus       219 Dp  220 (315)
                      +.
T Consensus        58 g~   59 (249)
T TIGR01457        58 DI   59 (249)
T ss_pred             CC
Confidence            43

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PLN02887 hydrolase family protein

Probab=92.94  E-value=0.22  Score=52.15  Aligned_cols=59  Identities=20%  Similarity=0.092  Sum_probs=47.3

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      .+.+.+++||||||+.+...                       .-|...+-|+++. +...++|-|.-...-+..+++.+
T Consensus       306 ~~iKLIa~DLDGTLLn~d~~-----------------------Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L  362 (580)
T PLN02887        306 PKFSYIFCDMDGTLLNSKSQ-----------------------ISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV  362 (580)
T ss_pred             cCccEEEEeCCCCCCCCCCc-----------------------cCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence            45668899999999987421                       3566678888888 67999999999999999999988


Q ss_pred             CCC
Q 021254          219 DPN  221 (315)
Q Consensus       219 Dp~  221 (315)
                      +..
T Consensus       363 ~l~  365 (580)
T PLN02887        363 DLA  365 (580)
T ss_pred             Ccc
Confidence            754

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=92.19  E-value=0.27  Score=46.82  Aligned_cols=54  Identities=17%  Similarity=0.076  Sum_probs=42.9

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      +..+++|||||||++...                        .=||+.+||+++. +.-.+++-|++..+-.+.+.++|
T Consensus         7 ~y~~~l~DlDGvl~~G~~------------------------~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L   61 (269)
T COG0647           7 KYDGFLFDLDGVLYRGNE------------------------AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL   61 (269)
T ss_pred             hcCEEEEcCcCceEeCCc------------------------cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence            345789999999998743                        3599999999999 55999999999876666555554

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=92.05  E-value=0.29  Score=44.92  Aligned_cols=60  Identities=25%  Similarity=0.109  Sum_probs=42.5

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcc-cEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~-fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      ++.++.||||||+.+...     +               -...|.+.+.++++.+. -.+++-|..+..-+.++++.+.+
T Consensus         1 ~~li~tDlDGTLl~~~~~-----~---------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~   60 (249)
T TIGR01485         1 RLLLVSDLDNTLVDHTDG-----D---------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL   60 (249)
T ss_pred             CeEEEEcCCCcCcCCCCC-----C---------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence            357888999999974211     0               01468888888888854 47777777777778888776655


Q ss_pred             C
Q 021254          221 N  221 (315)
Q Consensus       221 ~  221 (315)
                      .
T Consensus        61 ~   61 (249)
T TIGR01485        61 L   61 (249)
T ss_pred             C
Confidence            4

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=91.61  E-value=0.52  Score=42.81  Aligned_cols=42  Identities=12%  Similarity=0.275  Sum_probs=38.2

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCC
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQ  222 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~  222 (315)
                      ++.|||.++|.+++.+ .-.++|-|+|+..|..++++.+--+.
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke  114 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKE  114 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhcccc
Confidence            7899999999999995 59999999999999999999987554

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=91.04  E-value=0.33  Score=44.55  Aligned_cols=50  Identities=24%  Similarity=0.238  Sum_probs=37.5

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc----hhhHHHHHHHh
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ----SIYAGQLLDIL  218 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~----~~YA~~vL~~L  218 (315)
                      ++||+||||+....                        .=|++.++|+.+. +.+.+++-|++.    ..+++.+.+++
T Consensus         1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~   55 (236)
T TIGR01460         1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL   55 (236)
T ss_pred             CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence            48999999999742                        2468999999998 469999998555    45666666643

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=89.84  E-value=0.78  Score=47.72  Aligned_cols=85  Identities=15%  Similarity=0.127  Sum_probs=58.8

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVD  259 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIID  259 (315)
                      -..||++.+++++|+ ..++++|-|+..+.+|+.+++.++.+  +|.     +-....+...++.+   ....++|++|-
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~-----~~~p~~K~~~v~~l---~~~~~~v~~VG  473 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRA-----EVLPDDKAALIKEL---QEKGRVVAMVG  473 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEc-----cCChHHHHHHHHHH---HHcCCEEEEEe
Confidence            457999999999998 46999999999999999999999764  222     11111122233333   34567899999


Q ss_pred             CCchhhccCCCCeeee
Q 021254          260 NTPQVFQLQVDNGIPI  275 (315)
Q Consensus       260 Dsp~~~~~q~~NgI~I  275 (315)
                      |...-...-...++.|
T Consensus       474 Dg~nD~~al~~A~vgi  489 (562)
T TIGR01511       474 DGINDAPALAQADVGI  489 (562)
T ss_pred             CCCccHHHHhhCCEEE
Confidence            9987654433444544

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01675 plant-AP plant acid phosphatase

Probab=89.77  E-value=0.33  Score=45.18  Aligned_cols=92  Identities=10%  Similarity=-0.037  Sum_probs=53.8

Q ss_pred             CCCeEEEEeCCcceeceecCC----CCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHH
Q 021254          140 GLPITLVLDLDETLVHSSFDN----CKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQL  214 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~----~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~v  214 (315)
                      .+|..+|||+|+|++....-.    -....|.- ..|..-....--..-|++.+|++.+. ..++|++.|.-........
T Consensus        75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~-~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T  153 (229)
T TIGR01675        75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDP-TAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT  153 (229)
T ss_pred             CCCcEEEEccccccccCHHHHHHhccCCCcCCH-HHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence            578899999999999976300    00000100 00000000001235699999999997 6899999999988775555


Q ss_pred             HHHhCCCCCe-eeeEEEec
Q 021254          215 LDILDPNQTL-IGQRVYRD  232 (315)
Q Consensus       215 L~~LDp~~~~-f~~rl~Re  232 (315)
                      ++.|.-.|-. +.+.+.|.
T Consensus       154 ~~nL~~~G~~~~~~LiLR~  172 (229)
T TIGR01675       154 LDNLINAGFTGWKHLILRG  172 (229)
T ss_pred             HHHHHHcCCCCcCeeeecC
Confidence            5555433311 24455554

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PLN02151 trehalose-phosphatase

Probab=89.47  E-value=0.62  Score=46.06  Aligned_cols=60  Identities=18%  Similarity=0.139  Sum_probs=46.2

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~  216 (315)
                      ..++..|+||+||||+--...|.                  -+..-|.+.+-|+.|++.+.++|-|.-...-++.++.
T Consensus        95 ~~~~~ll~lDyDGTL~PIv~~P~------------------~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~  154 (354)
T PLN02151         95 EGKQIVMFLDYDGTLSPIVDDPD------------------RAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK  154 (354)
T ss_pred             cCCceEEEEecCccCCCCCCCcc------------------cccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence            35678899999999995432211                  1235789999999999889999999988888877764

>PLN02580 trehalose-phosphatase

Probab=89.06  E-value=0.7  Score=46.16  Aligned_cols=61  Identities=23%  Similarity=0.189  Sum_probs=48.5

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      ..++..|+||.||||+--...|.                  -+..-|.+.+-|+.|++.+.++|-|.-...-++.++..
T Consensus       116 ~~k~~~LfLDyDGTLaPIv~~Pd------------------~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~  176 (384)
T PLN02580        116 KGKKIALFLDYDGTLSPIVDDPD------------------RALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL  176 (384)
T ss_pred             hcCCeEEEEecCCccCCCCCCcc------------------cccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence            35778899999999986543221                  13356899999999999999999999998888887754

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=88.90  E-value=0.24  Score=46.66  Aligned_cols=79  Identities=24%  Similarity=0.220  Sum_probs=42.8

Q ss_pred             CCCCeEEEEeCCcceeceecCC----CCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcc-cEEEEEcCCchhh-HH
Q 021254          139 AGLPITLVLDLDETLVHSSFDN----CKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM-FDVVIFTAGQSIY-AG  212 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~----~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~-fEIvIfTas~~~Y-A~  212 (315)
                      ..+++.+|+|||||.++-+.-.    ..+..|+ +-.|+.-...---+.=||+.+||+++-++ -.|.--|...++. .+
T Consensus        76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~-pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~  154 (274)
T COG2503          76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFT-PETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKD  154 (274)
T ss_pred             cCCCceEEEecchHhhcCccccchhhhcCCCCC-ccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccc
Confidence            4566699999999999976311    1111110 00000000001123459999999999965 4454445555555 44


Q ss_pred             HHHHHh
Q 021254          213 QLLDIL  218 (315)
Q Consensus       213 ~vL~~L  218 (315)
                      .-++.|
T Consensus       155 ~T~~nL  160 (274)
T COG2503         155 GTIENL  160 (274)
T ss_pred             hhHHHH
Confidence            445544

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=88.72  E-value=0.42  Score=42.25  Aligned_cols=80  Identities=20%  Similarity=0.340  Sum_probs=43.7

Q ss_pred             EeeCchHHHHHHHhhcc-cEEEEEcCCchh----hHHHHHHHhCCC--CCeeeeEEEecceeeeCCcccccccccCCCCC
Q 021254          181 VRQRPYLHMFLEAVASM-FDVVIFTAGQSI----YAGQLLDILDPN--QTLIGQRVYRDSCVFADGEYLKDLTILGRDLA  253 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~-fEIvIfTas~~~----YA~~vL~~LDp~--~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~  253 (315)
                      ...-||+.+.|++|.+. +++++-|++...    .+..-.+.|+..  +......++..+         |.  .++.|  
T Consensus        72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---------K~--~v~~D--  138 (191)
T PF06941_consen   72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---------KT--LVGGD--  138 (191)
T ss_dssp             --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---------GG--GC--S--
T ss_pred             CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---------CC--eEecc--
Confidence            45669999999999965 688888887654    233333333221  111222333221         22  34444  


Q ss_pred             cEEEEECCchhhccCCCCeeee
Q 021254          254 RIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                        |+|||+|.........|+++
T Consensus       139 --vlIDD~~~n~~~~~~~g~~~  158 (191)
T PF06941_consen  139 --VLIDDRPHNLEQFANAGIPV  158 (191)
T ss_dssp             --EEEESSSHHHSS-SSESSEE
T ss_pred             --EEecCChHHHHhccCCCceE
Confidence              89999999886666677444

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=88.42  E-value=0.75  Score=43.73  Aligned_cols=60  Identities=22%  Similarity=0.108  Sum_probs=47.2

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccE--EEEEcCCchhhHHHHHH
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFD--VVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fE--IvIfTas~~~YA~~vL~  216 (315)
                      ..+|.+++||.||||++....|..                  +..=+++.+.|..|+..+.  ++|.|.-+..-.+..+.
T Consensus        15 ~a~~~~~~lDyDGTl~~i~~~p~~------------------a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~   76 (266)
T COG1877          15 NARKRLLFLDYDGTLTEIVPHPEA------------------AVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG   76 (266)
T ss_pred             cccceEEEEeccccccccccCccc------------------cCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence            477889999999999998754332                  2245788999999998887  88888888877777776

>PLN03017 trehalose-phosphatase

Probab=87.21  E-value=1.1  Score=44.63  Aligned_cols=60  Identities=20%  Similarity=0.135  Sum_probs=45.0

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHH
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      .++..|+||+||||+--...+.                  -...-|.+.+-|++|++.+.++|-|.-...-+..++..
T Consensus       109 ~k~~llflD~DGTL~Piv~~p~------------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l  168 (366)
T PLN03017        109 GKQIVMFLDYDGTLSPIVDDPD------------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKL  168 (366)
T ss_pred             CCCeEEEEecCCcCcCCcCCcc------------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcc
Confidence            5678889999999994322110                  01246888999999999999999999988888877543

>TIGR00685 T6PP trehalose-phosphatase

Probab=86.84  E-value=0.64  Score=42.78  Aligned_cols=49  Identities=18%  Similarity=0.108  Sum_probs=33.8

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccE--EEEEcCCc
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFD--VVIFTAGQ  207 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fE--IvIfTas~  207 (315)
                      ++..|+||+||||+.....|.                  .+..-|++.+.|+.|.+...  |+|-|.-.
T Consensus         2 ~~~~l~lD~DGTL~~~~~~p~------------------~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~   52 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEIVPDPD------------------AAVVSDRLLTILQKLAARPHNAIWIISGRK   52 (244)
T ss_pred             CcEEEEEecCccccCCcCCCc------------------ccCCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence            577899999999997532221                  12346889999999987644  45666653

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=86.19  E-value=0.86  Score=39.68  Aligned_cols=79  Identities=16%  Similarity=0.122  Sum_probs=58.3

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecce-eeeCCcccccccccCCCCCcEEEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSC-VFADGEYLKDLTILGRDLARIAIV  258 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C-~~~~g~y~KDL~~Lgrdl~~vIII  258 (315)
                      -..||++.++|++|.+ .+.++|.|......|..+.+.++...    ..++.+.+ ......+.+-+..|+.+.+.|++|
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~v  201 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMV  201 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEEE
Confidence            5679999999999995 59999999999999999999997743    22332221 111112355566678888899999


Q ss_pred             ECCch
Q 021254          259 DNTPQ  263 (315)
Q Consensus       259 DDsp~  263 (315)
                      -|...
T Consensus       202 GDg~n  206 (215)
T PF00702_consen  202 GDGVN  206 (215)
T ss_dssp             ESSGG
T ss_pred             ccCHH
Confidence            99764

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=85.66  E-value=0.39  Score=42.34  Aligned_cols=15  Identities=40%  Similarity=0.563  Sum_probs=13.2

Q ss_pred             EEEEeCCcceeceec
Q 021254          144 TLVLDLDETLVHSSF  158 (315)
Q Consensus       144 tLVLDLDeTLVhs~~  158 (315)
                      .++|||||||++|..
T Consensus         2 ~viFD~DGTLiDs~~   16 (197)
T TIGR01548         2 ALVLDMDGVMADVSQ   16 (197)
T ss_pred             ceEEecCceEEechH
Confidence            579999999999974

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=83.80  E-value=0.74  Score=43.08  Aligned_cols=92  Identities=11%  Similarity=-0.023  Sum_probs=69.0

Q ss_pred             eEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcE
Q 021254          180 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI  255 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~v  255 (315)
                      +....|-+ ++|++++ +.+.|.|.|....++= .++..++.. .+|++.+..-.-...+.   -|.+-|+.+|..++.+
T Consensus       112 ~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~  188 (237)
T KOG3085|consen  112 WKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC  188 (237)
T ss_pred             ceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence            34445555 9999999 6789999999988877 888888777 48988876433334443   3889999999999999


Q ss_pred             EEEECCchh-hccCCCCeee
Q 021254          256 AIVDNTPQV-FQLQVDNGIP  274 (315)
Q Consensus       256 IIIDDsp~~-~~~q~~NgI~  274 (315)
                      |.|||+... +.....-|+.
T Consensus       189 vhIgD~l~nD~~gA~~~G~~  208 (237)
T KOG3085|consen  189 VHIGDLLENDYEGARNLGWH  208 (237)
T ss_pred             EEecCccccccHhHHHcCCE
Confidence            999999987 6444444433

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=83.78  E-value=1.5  Score=43.24  Aligned_cols=53  Identities=15%  Similarity=0.227  Sum_probs=44.1

Q ss_pred             eeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh-C-----C-CCCeeeeEEE
Q 021254          178 TVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL-D-----P-NQTLIGQRVY  230 (315)
Q Consensus       178 ~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L-D-----p-~~~~f~~rl~  230 (315)
                      .-||.+-|++.++|+++. +...+.|-|++...|++.+++.+ +     + -..+|+.++.
T Consensus       180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt  240 (343)
T TIGR02244       180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV  240 (343)
T ss_pred             HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence            357888999999999998 56999999999999999999997 5     2 2447765555

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=83.69  E-value=1.6  Score=39.65  Aligned_cols=53  Identities=19%  Similarity=0.175  Sum_probs=35.2

Q ss_pred             EEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       145 LVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      ++.||||||+++...                       +.|.. +-++...+...++|-|.....-+..++..++..
T Consensus         2 i~~DlDgTLl~~~~~-----------------------~~~~~-~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l~   54 (236)
T TIGR02471         2 IITDLDNTLLGDDEG-----------------------LASFV-ELLRGSGDAVGFGIATGRSVESAKSRYAKLNLP   54 (236)
T ss_pred             eEEeccccccCCHHH-----------------------HHHHH-HHHHhcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence            688999999985321                       12222 445533356778888888888888888777653

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=83.55  E-value=1.6  Score=40.75  Aligned_cols=41  Identities=15%  Similarity=0.371  Sum_probs=35.5

Q ss_pred             EeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +..-||+-+.++.+++  .||++|-|-+..-..+.+|++.+..
T Consensus        83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~  125 (256)
T KOG3120|consen   83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH  125 (256)
T ss_pred             CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence            4456999999999984  4899999999999999999997654

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=83.35  E-value=2.3  Score=44.12  Aligned_cols=86  Identities=14%  Similarity=0.101  Sum_probs=60.9

Q ss_pred             EeeCchHHHHHHHhh-cc-cEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEE
Q 021254          181 VRQRPYLHMFLEAVA-SM-FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIV  258 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~-fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIII  258 (315)
                      ...|||+.+.|++|. +. ++++|-|...+.+|..+++.++.+. +|... .    ...+...++.   ++....+|++|
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~-~----p~~K~~~v~~---l~~~~~~v~~v  453 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAEL-L----PEDKLAIVKE---LQEEGGVVAMV  453 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccC-C----HHHHHHHHHH---HHHcCCEEEEE
Confidence            458999999999998 56 9999999999999999999998864 55421 1    1112223333   34455689999


Q ss_pred             ECCchhhccCCCCeeee
Q 021254          259 DNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       259 DDsp~~~~~q~~NgI~I  275 (315)
                      -|...-...-...++-|
T Consensus       454 GDg~nD~~al~~A~vgi  470 (556)
T TIGR01525       454 GDGINDAPALAAADVGI  470 (556)
T ss_pred             ECChhHHHHHhhCCEeE
Confidence            99988654434444444

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PRK11590 hypothetical protein; Provisional

Probab=82.95  E-value=0.67  Score=41.63  Aligned_cols=39  Identities=21%  Similarity=0.061  Sum_probs=35.0

Q ss_pred             EeeCchHHHHH-HHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          181 VRQRPYLHMFL-EAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       181 V~lRP~l~eFL-~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +..+||+.+.| +.++ +.+.++|-|++...++.++++.+.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~  134 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP  134 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence            45689999999 5677 689999999999999999999977

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=82.67  E-value=1.3  Score=40.97  Aligned_cols=78  Identities=19%  Similarity=0.090  Sum_probs=44.9

Q ss_pred             CCCeEEEEeCCcceeceecC----CCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHH
Q 021254          140 GLPITLVLDLDETLVHSSFD----NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQL  214 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~----~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~v  214 (315)
                      .++..+|||+|||++....-    ......|. +-.|..-....--..=|++.+|++.+. ..++|++-|.-....-+.-
T Consensus        70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~-~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T  148 (229)
T PF03767_consen   70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFS-PEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREAT  148 (229)
T ss_dssp             TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH--CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHH
T ss_pred             CCCcEEEEECCcccccCHHHHHHHhhccCCCC-hHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHH
Confidence            56789999999999965321    00000000 000000000000134588999999999 5799999998877655555


Q ss_pred             HHHh
Q 021254          215 LDIL  218 (315)
Q Consensus       215 L~~L  218 (315)
                      ++.|
T Consensus       149 ~~nL  152 (229)
T PF03767_consen  149 EKNL  152 (229)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4444

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=82.48  E-value=0.7  Score=41.01  Aligned_cols=16  Identities=38%  Similarity=0.584  Sum_probs=13.9

Q ss_pred             eEEEEeCCcceeceec
Q 021254          143 ITLVLDLDETLVHSSF  158 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~  158 (315)
                      ++++|||||||+++..
T Consensus         3 ~~viFDlDGTL~ds~~   18 (221)
T TIGR02253         3 KAIFFDLDDTLIDTSG   18 (221)
T ss_pred             eEEEEeCCCCCcCCCC
Confidence            5799999999999863

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=82.46  E-value=0.71  Score=40.54  Aligned_cols=15  Identities=20%  Similarity=0.151  Sum_probs=13.1

Q ss_pred             eEEEEeCCcceecee
Q 021254          143 ITLVLDLDETLVHSS  157 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~  157 (315)
                      +.++|||||||+.+.
T Consensus         1 k~viFDlDGTL~d~~   15 (203)
T TIGR02252         1 KLITFDAVGTLLALK   15 (203)
T ss_pred             CeEEEecCCceeeeC
Confidence            368999999999985

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=82.42  E-value=0.76  Score=42.08  Aligned_cols=16  Identities=19%  Similarity=0.163  Sum_probs=13.8

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      -++++||+||||+++.
T Consensus         2 ~k~viFD~DGTLiDs~   17 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFG   17 (253)
T ss_pred             ceEEEEeCCCCeecCC
Confidence            3579999999999984

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=82.28  E-value=0.66  Score=39.82  Aligned_cols=16  Identities=19%  Similarity=0.463  Sum_probs=14.0

Q ss_pred             eEEEEeCCcceeceec
Q 021254          143 ITLVLDLDETLVHSSF  158 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~  158 (315)
                      ++++||+||||+++..
T Consensus         2 ~~iiFD~DGTL~ds~~   17 (185)
T TIGR02009         2 KAVIFDMDGVIVDTAP   17 (185)
T ss_pred             CeEEEcCCCcccCChH
Confidence            5789999999999964

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=82.17  E-value=2.6  Score=45.14  Aligned_cols=61  Identities=25%  Similarity=0.150  Sum_probs=45.2

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHH
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~  217 (315)
                      .++..+++|+||||+.....+..                  ...-|.+.+.|++|.+  ...|+|-|.-+....++++..
T Consensus       490 ~~~rLi~~D~DGTL~~~~~~~~~------------------~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~  551 (726)
T PRK14501        490 ASRRLLLLDYDGTLVPFAPDPEL------------------AVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGD  551 (726)
T ss_pred             ccceEEEEecCccccCCCCCccc------------------CCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCC
Confidence            56788999999999975321110                  1135788899999996  788999999988877776654


Q ss_pred             h
Q 021254          218 L  218 (315)
Q Consensus       218 L  218 (315)
                      +
T Consensus       552 ~  552 (726)
T PRK14501        552 L  552 (726)
T ss_pred             C
Confidence            4

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=82.05  E-value=0.74  Score=42.40  Aligned_cols=19  Identities=26%  Similarity=0.275  Sum_probs=15.5

Q ss_pred             CCCeEEEEeCCcceeceec
Q 021254          140 GLPITLVLDLDETLVHSSF  158 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~  158 (315)
                      .+-+.++|||||||+++..
T Consensus        20 ~~~k~viFDlDGTLiDs~~   38 (248)
T PLN02770         20 APLEAVLFDVDGTLCDSDP   38 (248)
T ss_pred             CccCEEEEcCCCccCcCHH
Confidence            3346899999999999864

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=81.51  E-value=0.79  Score=41.90  Aligned_cols=16  Identities=38%  Similarity=0.517  Sum_probs=14.0

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      -+.++|||||||+++.
T Consensus        10 ~k~iiFDlDGTL~D~~   25 (238)
T PRK10748         10 ISALTFDLDDTLYDNR   25 (238)
T ss_pred             ceeEEEcCcccccCCh
Confidence            4679999999999985

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=81.28  E-value=0.82  Score=42.40  Aligned_cols=16  Identities=19%  Similarity=0.179  Sum_probs=14.0

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      -++++||+||||+++.
T Consensus         4 ~k~vIFDlDGTLiDs~   19 (267)
T PRK13478          4 IQAVIFDWAGTTVDFG   19 (267)
T ss_pred             eEEEEEcCCCCeecCC
Confidence            4689999999999984

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=81.24  E-value=1.3  Score=45.83  Aligned_cols=88  Identities=14%  Similarity=0.098  Sum_probs=62.6

Q ss_pred             eEeeCchHHHHHHHhh-ccc-EEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEE
Q 021254          180 FVRQRPYLHMFLEAVA-SMF-DVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAI  257 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~f-EIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vII  257 (315)
                      ....||++.+.|++|+ +.+ +++|-|+..+.+|..+++.++..+ +|....     ...+   .+-+..++...+++++
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~-----p~~K---~~~i~~l~~~~~~v~~  430 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELL-----PEDK---LEIVKELREKYGPVAM  430 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccC-----cHHH---HHHHHHHHhcCCEEEE
Confidence            3568999999999999 468 999999999999999999998865 443211     1111   2334445566689999


Q ss_pred             EECCchhhccCCCCeeeec
Q 021254          258 VDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~  276 (315)
                      |-|...-...-...++.|.
T Consensus       431 vGDg~nD~~al~~A~vgia  449 (536)
T TIGR01512       431 VGDGINDAPALAAADVGIA  449 (536)
T ss_pred             EeCCHHHHHHHHhCCEEEE
Confidence            9999876544444444443

.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=80.81  E-value=2.3  Score=39.41  Aligned_cols=55  Identities=25%  Similarity=0.166  Sum_probs=37.7

Q ss_pred             CCeEEEEeCCccee-ceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHH-HhhcccEEEEEcCCchhhHHHHHHHh
Q 021254          141 LPITLVLDLDETLV-HSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE-AVASMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       141 ~k~tLVLDLDeTLV-hs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~-~l~~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      +++.||-||||||+ ....                        -+.-+.++|+ ......-+++-|..+..-+..++...
T Consensus         1 ~~~ll~sDlD~Tl~~~~~~------------------------~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~   56 (247)
T PF05116_consen    1 PPRLLASDLDGTLIDGDDE------------------------ALARLEELLEQQARPEILFVYVTGRSLESVLRLLREY   56 (247)
T ss_dssp             -SEEEEEETBTTTBHCHHH------------------------HHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHC
T ss_pred             CCEEEEEECCCCCcCCCHH------------------------HHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhC
Confidence            46789999999999 2110                        2455666777 44467888888888888888888865


Q ss_pred             C
Q 021254          219 D  219 (315)
Q Consensus       219 D  219 (315)
                      .
T Consensus        57 ~   57 (247)
T PF05116_consen   57 N   57 (247)
T ss_dssp             T
T ss_pred             C
Confidence            3

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	315
3pgl_A	180	Crystal Structure Of Human Small C-Terminal Domain		2e-34
1t9z_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		4e-34
2ghq_A	181	Ctd-Specific Phosphatase Scp1 In Complex With Pepti		4e-34
1ta0_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		7e-34
2q5e_A	187	Crystal Structure Of Human Carboxy-Terminal Domain		8e-34
3l0y_A	184	Crystal Structure Of Scp1 Phosphatase D98a Mutant L		9e-34
3l0c_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		9e-34
3l0b_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		5e-33
2hhl_A	195	Crystal Structure Of The Human Small Ctd Phosphatas		9e-33
3qle_A	204	Structural Basis For The Function Of Tim50 In The M		2e-21
3ef0_A	372	The Structure Of Fcp1, An Essential Rna Polymerase		1e-05
3ef1_A	442	The Structure Of Fcp1, An Essential Rna Polymerase		7e-05

>pdb|3PGL|A Chain A, Crystal Structure Of Human Small C-Terminal Domain Phosphatase 1 (Scp1) Bound To Rabeprazole Length = 180

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DLDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 15  ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 74
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 75  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 133
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
             +    DN +P+ SWF + SD+ L  LL F E L   DDV  +++Q
Sbjct: 134 ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 180

>pdb|1T9Z|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein Length = 197

Iteration: 1
 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DLDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+    +F+ V+
Sbjct: 16  ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRXGELFECVL 75
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I DN+P
Sbjct: 76  FTASLAKYADPVADXLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLIXDNSP 134
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
             +    DN +P+ SWF + SD+ L  LL F E L   DDV  +++Q
Sbjct: 135 ASYVFHPDNAVPVASWFDNXSDTELHDLLPFFEQLSRVDDVYSVLRQ 181

>pdb|2GHQ|A Chain A, Ctd-Specific Phosphatase Scp1 In Complex With Peptide C- Terminal Domain Of Rna Polymerase Ii Length = 181

Iteration: 1
 Score =  141 bits (356), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V++LDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 16  ICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 75
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 76  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 134
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
             +    DN +P+ SWF + SD+ L  LL F E L   DDV  +++Q
Sbjct: 135 ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 181

>pdb|1TA0|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein With Associated Ligand Length = 197

Iteration: 1
 Score =  140 bits (354), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 104/167 (62%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+ LDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 16  ICVVIXLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 75
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 76  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 134
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
             +    DN +P+ SWF + SD+ L  LL F E L   DDV  +++Q
Sbjct: 135 ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 181

>pdb|2Q5E|A Chain A, Crystal Structure Of Human Carboxy-Terminal Domain Rna Polymerase Ii Polypeptide A Small Phosphatase 2 Length = 187

Iteration: 1
 Score =  140 bits (354), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DLDETLVHSSF    +ADF  PI  +     V+V +RPY+  FL  +  +F+ V+
Sbjct: 18  ICVVIDLDETLVHSSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVL 77
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD    +   R++R+SCVF  G Y+KDL+ LGRDL +  I+DN+P
Sbjct: 78  FTASLAKYADPVTDLLD-RCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSP 136
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDV 303
             +    +N +P++SWF D +D+ LL+L+   E L GA+DV
Sbjct: 137 ASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGAEDV 177

>pdb|3L0Y|A Chain A, Crystal Structure Of Scp1 Phosphatase D98a Mutant Length = 184

Iteration: 1
 Score =  140 bits (353), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 104/167 (62%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DL ETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 19  ICVVIDLAETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 78
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+DN+P
Sbjct: 79  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP 137
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
             +    DN +P+ SWF + SD+ L  LL F E L   DDV  +++Q
Sbjct: 138 ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 184

>pdb|3L0C|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant With Trap Inorganic Phosphate Length = 184

Iteration: 1
 Score =  140 bits (353), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 104/167 (62%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+DLDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 19  ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 78
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+ N+P
Sbjct: 79  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILANSP 137
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
             +    DN +P+ SWF + SD+ L  LL F E L   DDV  +++Q
Sbjct: 138 ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 184

>pdb|3L0B|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant Phosphory Intermediate Length = 184

Iteration: 1
 Score =  137 bits (346), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI 202
           I +V+ LDETLVHSSF    +ADF  P+     V  V+V +RP++  FL+ +  +F+ V+
Sbjct: 19  ICVVIXLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVL 78
Query: 203 FTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTP 262
           FTA  + YA  + D+LD        R++R+SCVF  G Y+KDL+ LGRDL R+ I+ N+P
Sbjct: 79  FTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILANSP 137
Query: 263 QVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADDVRPIIKQ 309
             +    DN +P+ SWF + SD+ L  LL F E L   DDV  +++Q
Sbjct: 138 ASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 184

>pdb|2HHL|A Chain A, Crystal Structure Of The Human Small Ctd Phosphatase 3 Isoform 1 Length = 195

Iteration: 1
 Score =  137 bits (345), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
Query: 145 LVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT 204
           +V+DLDETLVHSSF    +ADF  P+     +  V+V +RP++  FL+ +  +F+ V+FT
Sbjct: 31  VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 90
Query: 205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQV 264
           A  + YA  + D+LD    +   R++R+SCVF  G Y+KDL+ LGR+L+++ IVDN+P  
Sbjct: 91  ASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPAS 149
Query: 265 FQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGADD 302
           +    +N +P++SWF D +D+ LL L+ F E L   DD
Sbjct: 150 YIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDD 187

>pdb|3QLE|A Chain A, Structural Basis For The Function Of Tim50 In The Mitochondrial Presequence Translocase Length = 204

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 18/166 (10%)
Query: 144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIF 203
           TLV+ L++ LVHS +              K   +T    +RP    FL  ++  +++V+F
Sbjct: 36  TLVITLEDFLVHSEWSQ------------KHGWRTA---KRPGADYFLGYLSQYYEIVLF 80
Query: 204 TAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ 263
           ++   +Y+ ++ + LDP    +   ++++ CV+ DG ++KDL+ L RDL+++ I+D  P 
Sbjct: 81  SSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPN 140
Query: 264 VFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVG--ADDVRPII 307
            ++LQ +N IP+E W G+ +D  L+ L+ FLE L      DVRPI+
Sbjct: 141 SYKLQPENAIPMEPWNGE-ADDKLVRLIPFLEYLATQQTKDVRPIL 185

>pdb|3EF0|A Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd Phosphatase Length = 372

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEV-----------------QTVFVRQRP 185
           ++L++DLD+T++H++ D       S P +   +V                    +++ RP
Sbjct: 19  LSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRP 78
Query: 186 YLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 229
            L  FL+ ++ ++++ I+T G   YA ++  I+DP   L   RV
Sbjct: 79  GLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRV 122

>pdb|3EF1|A Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd Phosphatase Length = 442

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEV-----------------QTVFVRQRP 185
           ++L++ LD+T++H++ D       S P +   +V                    +++ RP
Sbjct: 27  LSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRP 86
Query: 186 YLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV 229
            L  FL+ ++ ++++ I+T G   YA ++  I+DP   L   RV
Sbjct: 87  GLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRV 130

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	315
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	2e-77
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	3e-76
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	8e-67
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	2e-42
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	1e-39
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	6e-39
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} Length = 195

 Score =  234 bits (598), Expect = 2e-77
 Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 1/191 (0%)

Query: 119 QNLPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQT 178
           Q +P  +P      P    +      +V+DLDETLVHSSF    +ADF  P+     +  
Sbjct: 5   QVIPIPSPPAKYLLPEVTVLDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQ 64

Query: 179 VFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD 238
           V+V +RP++  FL+ +  +F+ V+FTA  + YA  + D+LD    +   R++R+SCVF  
Sbjct: 65  VYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHR 123

Query: 239 GEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLV 298
           G Y+KDL+ LGR+L+++ IVDN+P  +    +N +P++SWF D +D+ LL L+ F E L 
Sbjct: 124 GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLS 183

Query: 299 GADDVRPIIKQ 309
             DD       
Sbjct: 184 REDDEGHHHHH 194

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A Length = 181

 Score =  230 bits (589), Expect = 3e-76
 Identities = 74/189 (39%), Positives = 109/189 (57%), Gaps = 12/189 (6%)

Query: 121 LPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVF 180
           LP+       +           I +V++LDETLVHSSF    +ADF  P+     V  V+
Sbjct: 5   LPEAKAQDSDK-----------ICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVY 53

Query: 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE 240
           V +RP++  FL+ +  +F+ V+FTA  + YA  + D+LD        R++R+SCVF  G 
Sbjct: 54  VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWG-AFRARLFRESCVFHRGN 112

Query: 241 YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGA 300
           Y+KDL+ LGRDL R+ I+DN+P  +    DN +P+ SWF + SD+ L  LL F E L   
Sbjct: 113 YVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRV 172

Query: 301 DDVRPIIKQ 309
           DDV  +++Q
Sbjct: 173 DDVYSVLRQ 181

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} Length = 204

 Score =  207 bits (528), Expect = 8e-67
 Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 18/179 (10%)

Query: 133 PLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLE 192
           P   P    P+TLV+ L++ LVHS +                +       +RP    FL 
Sbjct: 25  PPPPPPYQRPLTLVITLEDFLVHSEWS---------------QKHGWRTAKRPGADYFLG 69

Query: 193 AVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDL 252
            ++  +++V+F++   +Y+ ++ + LDP    +   ++++ CV+ DG ++KDL+ L RDL
Sbjct: 70  YLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDL 129

Query: 253 ARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLV--GADDVRPIIKQ 309
           +++ I+D  P  ++LQ +N IP+E W G+  D  L+ L+ FLE L      DVRPI+  
Sbjct: 130 SKVIIIDTDPNSYKLQPENAIPMEPWNGEA-DDKLVRLIPFLEYLATQQTKDVRPILNS 187

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} Length = 372

 Score =  149 bits (376), Expect = 2e-42
 Identities = 33/171 (19%), Positives = 70/171 (40%), Gaps = 21/171 (12%)

Query: 143 ITLVLDLDETLVHSSFDNCKDA-----------------DFSFPIHSKMEVQTVFVRQRP 185
           ++L++DLD+T++H++ D                       F+            +++ RP
Sbjct: 19  LSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRP 78

Query: 186 YLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV-YRDSCVFADGEYLKD 244
            L  FL+ ++ ++++ I+T G   YA ++  I+DP   L   RV  RD       + L+ 
Sbjct: 79  GLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRR 138

Query: 245 LTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLE 295
             +   D + + ++D+   V+     N I +  +        + S  +   
Sbjct: 139 --LFPCDTSMVVVIDDRGDVWDWN-PNLIKVVPYEFFVGIGDINSNFLSGN 186

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} Length = 442

 Score =  143 bits (361), Expect = 1e-39
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 26/191 (13%)

Query: 143 ITLVLDLDETLVHSSFDNCKDA-----------------DFSFPIHSKMEVQTVFVRQRP 185
           ++L++ LD+T++H++ D                       F+            +++ RP
Sbjct: 27  LSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRP 86

Query: 186 YLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV-YRDSCVFADGEYLKD 244
            L  FL+ ++ ++++ I+T G   YA ++  I+DP   L   RV  RD       + L+ 
Sbjct: 87  GLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRR 146

Query: 245 LTILGRDLARIAIVDNTPQVFQLQVDNGIPIESW-----FGDPSDSALLSLLMFLETLVG 299
             +   D + + ++D+   V+     N I +  +      GD + + L       E    
Sbjct: 147 --LFPCDTSMVVVIDDRGDVWDWN-PNLIKVVPYEFFVGIGDINSNFLAKSTPLPEQEQL 203

Query: 300 ADDVRPIIKQK 310
                P  +  
Sbjct: 204 IPLEIPKDEPD 214

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} Length = 320

 Score =  138 bits (349), Expect = 6e-39
 Identities = 43/279 (15%), Positives = 89/279 (31%), Gaps = 38/279 (13%)

Query: 55  GKNVGQGTCEDILPIDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLY 114
                  T  D + I      P+ +L      +  + D  S   +   + D+        
Sbjct: 49  NLKYKGKTAADNVKISALELKPNFKLMMVGSTEADIEDACSLPDNIGEVVDDFDDADERE 108

Query: 115 FMGWQNLPQIAPSYWP----RTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPI 170
                +   +A         +     P       LVLD+D TL                 
Sbjct: 109 ESVAHSAVYLAKVQRRVRDYKIKELAPPREGKKLLVLDIDYTL----------------F 152

Query: 171 HSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVY 230
             +   +T     RPYLH FL +    +D+VI++A    +  + + +L        + ++
Sbjct: 153 DHRSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMF 212

Query: 231 RDS--------CVFADGEYLKDLTIL-----GRDLARIAIVDNTPQVFQLQVDNGIPI-- 275
                              +K L ++       + +   + D+  + F +   +G+ I  
Sbjct: 213 YLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRP 272

Query: 276 --ESWFGDPSDSALLSLLMFLETLVG-ADDVRPIIKQKY 311
             ++     +D+ LL L  +L  +     D   +  +K+
Sbjct: 273 FRQAHLNRGTDTELLKLSDYLRKIAHHCPDFNSLNHRKW 311

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 44/317 (13%), Positives = 91/317 (28%), Gaps = 91/317 (28%)

Query: 8   FGTNESDHFSSLSAELFGKSAEDPVCSHEEINFGTIFDLDLRRPCHEGKNVGQGTCEDIL 67
           F T E  +             +D + S  E  F  + + D    C   K+V     +D+ 
Sbjct: 9   FETGEHQY-----------QYKD-ILSVFEDAF--VDNFD----C---KDV-----QDMP 42

Query: 68  P-------IDKTLCNPHHELFSYSIQQTSLLDQGSNMQSCLGIADEEYYNPYLYFMGWQN 120
                   ID  + +      +  +  T LL +   M                 F+    
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWT-LLSKQEEM--------------VQKFVE--- 84

Query: 121 LPQIAPSY-WPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADF-SFPIHSKMEVQT 178
              +  +Y +    L  PI             +++   +   +D  +    + +K  V  
Sbjct: 85  -EVLRINYKF----LMSPIKTEQR------QPSMMTRMYIEQRDRLYNDNQVFAKYNVS- 132

Query: 179 VFVRQRPY--LHMFLEAVASMFDVVIF---TAGQSIYAGQLLDILDPNQTLIGQRVYRDS 233
              R +PY  L   L  +    +V+I     +G++  A  +               Y+  
Sbjct: 133 ---RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC------------LSYKVQ 177

Query: 234 CVFADGEYLKDLTILGRDLARIAIVDNT----PQVFQLQVDNGIPIESWFGDPSD--SAL 287
           C      +  +L         + ++          +  + D+   I+            L
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 288 LSLLMFLETLVGADDVR 304
           L    +   L+   +V+
Sbjct: 238 LKSKPYENCLLVLLNVQ 254

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	315
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	100.0
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	100.0
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	100.0
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	100.0
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	100.0
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.8
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.78
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.75
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.72
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	98.68
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.64
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.6
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.56
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	98.48
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.47
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	98.46
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.44
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.43
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.42
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	98.42
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.41
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.4
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.39
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.39
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	98.37
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.35
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	98.35
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	98.35
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	98.33
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	98.33
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	98.31
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	98.3
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.3
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	98.27
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.26
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	98.22
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	98.19
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	98.18
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.17
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.16
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.16
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	98.14
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	98.13
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.1
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.07
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.06
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.05
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.04
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	98.02
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.01
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.0
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	97.96
3mmz_A	176	Putative HAD family hydrolase; structural genomics	97.96
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	97.95
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	97.94
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.94
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.89
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	97.88
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	97.86
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	97.86
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	97.85
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	97.83
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.82
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	97.77
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	97.58
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	97.57
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	97.53
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	97.52
2zg6_A	220	Putative uncharacterized protein ST2620, probable	97.44
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	97.43
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	97.4
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	97.4
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	97.38
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	97.38
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	97.36
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	97.36
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	97.31
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.3
2hsz_A	243	Novel predicted phosphatase; structural genomics,	97.24
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	97.24
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	97.21
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	97.18
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.02
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	96.98
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	96.96
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	96.95
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	96.92
1te2_A	226	Putative phosphatase; structural genomics, phospha	96.89
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	96.82
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	96.76
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	96.76
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	96.73
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	96.72
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	96.65
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	96.63
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	96.61
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	96.53
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	96.52
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	96.49
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	96.48
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	96.42
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	96.41
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	96.39
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	96.28
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	96.28
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	96.25
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	96.23
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	96.2
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	96.19
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	96.16
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	96.02
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	95.99
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	95.99
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	95.97
3dao_A	283	Putative phosphatse; structural genomics, joint ce	95.82
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	95.76
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	95.72
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	95.68
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	95.62
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	95.61
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	95.61
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	95.36
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	95.33
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.25
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	94.23
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	95.18
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	95.17
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	95.1
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	95.09
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	94.94
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	94.92
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	94.81
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	94.8
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	94.71
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	94.64
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	94.6
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	94.48
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	94.35
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	94.03
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	94.01
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	93.78
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	93.7
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	93.69
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	93.67
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	93.64
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	93.07
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	92.94
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	92.23
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	90.68
2hsz_A	243	Novel predicted phosphatase; structural genomics,	86.43
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	86.07
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	85.73
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	85.47
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	84.77
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	84.51
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	84.36
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	84.09
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	84.06
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	83.9
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	83.76
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	83.59
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	83.51
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	83.31
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	83.28
1te2_A	226	Putative phosphatase; structural genomics, phospha	83.26
2zg6_A	220	Putative uncharacterized protein ST2620, probable	83.18
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	82.8
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	82.6
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	82.54
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	82.22
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	82.16
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	81.95
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	81.69
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	81.66
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	81.17
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	80.66
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	80.48

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=100.00  E-value=5.2e-46  Score=335.04  Aligned_cols=170  Identities=32%  Similarity=0.667  Sum_probs=151.8

Q ss_pred             CCCCCCCCCCC--CCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEc
Q 021254          127 SYWPRTPLREP--IAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFT  204 (315)
Q Consensus       127 ~~~~~llP~~~--~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfT  204 (315)
                      +..+.|||++.  ..++|+||||||||||||+++.+               .+++||++|||+++||++|+++|||+|||
T Consensus        17 p~~~~lLp~~~~~~~~~~~tLVLDLDeTLvh~~~~~---------------~~~~~v~~RPgl~eFL~~l~~~yeivI~T   81 (204)
T 3qle_A           17 PPFPDLLPPPPPPPYQRPLTLVITLEDFLVHSEWSQ---------------KHGWRTAKRPGADYFLGYLSQYYEIVLFS   81 (204)
T ss_dssp             --CCCCSCCCC----CCSEEEEEECBTTTEEEEEET---------------TTEEEEEECTTHHHHHHHHTTTEEEEEEC
T ss_pred             CCcccCCCCCCccccCCCeEEEEeccccEEeeeccc---------------cCceeEEeCCCHHHHHHHHHhCCEEEEEc
Confidence            34445555443  45899999999999999998643               24678999999999999999999999999


Q ss_pred             CCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCC
Q 021254          205 AGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSD  284 (315)
Q Consensus       205 as~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D  284 (315)
                      |+.+.||++|++.|||.+.+|+++++|++|...+|.|+|||+.||+++++||||||++.+|..||+|||+|++|.|+. |
T Consensus        82 as~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~~~~-D  160 (204)
T 3qle_A           82 SNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEA-D  160 (204)
T ss_dssp             SSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCCCSSC-C
T ss_pred             CCcHHHHHHHHHHhCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeECCCC-C
Confidence            999999999999999998899999999999999999999999999999999999999999999999999999999876 6


Q ss_pred             hHHHHHHHHHhhcc--CCCChHHHHHhhhcC
Q 021254          285 SALLSLLMFLETLV--GADDVRPIIKQKYGS  313 (315)
Q Consensus       285 ~eLl~L~~~L~~L~--~~~DVR~~l~~~f~~  313 (315)
                      ++|++|+|||+.|+  .++|||++|++ |+.
T Consensus       161 ~eL~~L~~~L~~L~~~~~~DVR~~L~~-~~~  190 (204)
T 3qle_A          161 DKLVRLIPFLEYLATQQTKDVRPILNS-FED  190 (204)
T ss_dssp             CHHHHHHHHHHHHHHTCCSCSHHHHTT-SSC
T ss_pred             hhHHHHHHHHHHHhhcChHHHHHHHHH-hcC
Confidence            69999999999998  58999999986 554

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=100.00  E-value=1.4e-45  Score=324.79  Aligned_cols=178  Identities=41%  Similarity=0.723  Sum_probs=168.3

Q ss_pred             CCCCCCCCCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhh
Q 021254          131 RTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIY  210 (315)
Q Consensus       131 ~llP~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~Y  210 (315)
                      .|+|+.+...+|+|||||||||||||++.+..++++.+.+.+++..+.+|+++|||+++||++|++.|+++|||++.+.|
T Consensus         4 llp~~~~~~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T~~~~~~   83 (181)
T 2ght_A            4 LLPEAKAQDSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKY   83 (181)
T ss_dssp             SSCCCCGGGTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHH
T ss_pred             CCCCCCcccCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEcCCCHHH
Confidence            34444555689999999999999999998888889999999999889999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCChHHHHH
Q 021254          211 AGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSL  290 (315)
Q Consensus       211 A~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~eLl~L  290 (315)
                      |+++++.||+.+ +|.++++|++|...+|.|+|+|+.||+++++||+|||++..|..|++|||+|.+|+++.+|++|++|
T Consensus        84 a~~vl~~ld~~~-~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~~~~~~D~eL~~l  162 (181)
T 2ght_A           84 ADPVADLLDKWG-AFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDL  162 (181)
T ss_dssp             HHHHHHHHCTTC-CEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCCSSCTTCCHHHHH
T ss_pred             HHHHHHHHCCCC-cEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEeccccCCCChHHHHHH
Confidence            999999999997 8999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCChHHHHHh
Q 021254          291 LMFLETLVGADDVRPIIKQ  309 (315)
Q Consensus       291 ~~~L~~L~~~~DVR~~l~~  309 (315)
                      +|||+.|+.++|||++|++
T Consensus       163 ~~~L~~l~~~~DVr~~l~~  181 (181)
T 2ght_A          163 LPFFEQLSRVDDVYSVLRQ  181 (181)
T ss_dssp             HHHHHHHTTCSCTHHHHCC
T ss_pred             HHHHHHhCcCccHHHHhhC
Confidence            9999999999999999973

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.9e-42  Score=308.89  Aligned_cols=183  Identities=38%  Similarity=0.688  Sum_probs=164.0

Q ss_pred             CCC-CCCCCCCCCCCCCCCCCCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcc
Q 021254          119 QNL-PQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASM  197 (315)
Q Consensus       119 ~~l-p~~~~~~~~~llP~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~  197 (315)
                      +++ |.......+.|+|+.+...+|+|||||||||||||++.+...+++.+++.+++....+|+++|||+++||++|++.
T Consensus         4 ~~~~~~~~~~~~~llp~~~~~~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~   83 (195)
T 2hhl_A            4 RQVIPIPSPPAKYLLPEVTVLDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL   83 (195)
T ss_dssp             -CCSCCCCCCCSSSSCCCCGGGTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH
T ss_pred             hhcCCCCCCCCcCCCCCCCcccCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC
Confidence            444 4334444445555554568999999999999999999888888999999999988999999999999999999999


Q ss_pred             cEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeecc
Q 021254          198 FDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       198 fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      |+++|||++.+.||+++++.||+.+ +|..+++|++|...++.|+|+|+.||+++++||+|||++..|..++.|||+|.+
T Consensus        84 ~~i~I~Tss~~~~a~~vl~~ld~~~-~f~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~  162 (195)
T 2hhl_A           84 FECVLFTASLAKYADPVADLLDRWG-VFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQS  162 (195)
T ss_dssp             SEEEEECSSCHHHHHHHHHHHCCSS-CEEEEECGGGCEEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCC
T ss_pred             CeEEEEcCCCHHHHHHHHHHhCCcc-cEEEEEEcccceecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEee
Confidence            9999999999999999999999997 899999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCChHHHHHHHHHhhccCCCC
Q 021254          278 WFGDPSDSALLSLLMFLETLVGADD  302 (315)
Q Consensus       278 f~~d~~D~eLl~L~~~L~~L~~~~D  302 (315)
                      |+++++|++|++|+|||+.|+.++|
T Consensus       163 ~~~~~~D~eL~~L~~~L~~l~~~~~  187 (195)
T 2hhl_A          163 WFDDMTDTELLDLIPFFEGLSREDD  187 (195)
T ss_dssp             CSSCTTCCHHHHHHHHHHHHHC---
T ss_pred             ecCCCChHHHHHHHHHHHHHHhCcC
Confidence            9999999999999999999998765

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=100.00  E-value=3.4e-41  Score=322.17  Aligned_cols=160  Identities=23%  Similarity=0.327  Sum_probs=146.0

Q ss_pred             CCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHH
Q 021254          138 IAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       138 ~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      +..+|+||||||||||||+...                ..++++++|||+++||++|+++|||+||||+.+.||++|++.
T Consensus       136 ~~~~k~tLVLDLDeTLvh~~~~----------------~~~~~~~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~  199 (320)
T 3shq_A          136 PREGKKLLVLDIDYTLFDHRSP----------------AETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRL  199 (320)
T ss_dssp             CCTTCEEEEECCBTTTBCSSSC----------------CSSHHHHBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHH
T ss_pred             CcCCCcEEEEeccccEEccccc----------------CCCcceEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHH
Confidence            3568999999999999999742                134678999999999999999999999999999999999999


Q ss_pred             hCCCCCe-eeeEEEecceeee------CC-ccccccccc-----CCCCCcEEEEECCchhhccCCCCeeeeccccCC---
Q 021254          218 LDPNQTL-IGQRVYRDSCVFA------DG-EYLKDLTIL-----GRDLARIAIVDNTPQVFQLQVDNGIPIESWFGD---  281 (315)
Q Consensus       218 LDp~~~~-f~~rl~Re~C~~~------~g-~y~KDL~~L-----grdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d---  281 (315)
                      |||.+.. +.+++||++|...      .| .|+|||++|     ||++++||||||+|.+|.+||+|||+|++|+++   
T Consensus       200 Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~I~~~~~~~~~  279 (320)
T 3shq_A          200 LGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPFRQAHLN  279 (320)
T ss_dssp             TTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEECCCCCCHHHH
T ss_pred             hCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEEeCeEcCCCCC
Confidence            9999864 7899999998643      25 599999999     999999999999999999999999999999986   


Q ss_pred             -CCChHHHHHHHHHhhcc-CCCChHHHHHhhhcC
Q 021254          282 -PSDSALLSLLMFLETLV-GADDVRPIIKQKYGS  313 (315)
Q Consensus       282 -~~D~eLl~L~~~L~~L~-~~~DVR~~l~~~f~~  313 (315)
                       .+|++|++|+|||+.|+ .++|||++++++|+.
T Consensus       280 ~~~D~eL~~L~~~L~~L~~~~~DVr~~~~~~w~~  313 (320)
T 3shq_A          280 RGTDTELLKLSDYLRKIAHHCPDFNSLNHRKWEH  313 (320)
T ss_dssp             TTTCCHHHHHHHHHHHHHHHCSCGGGCCGGGGGG
T ss_pred             CCccHHHHHHHHHHHHHhccCcchhHHHHHHHHH
Confidence             78999999999999999 999999999999863

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.2e-34  Score=282.73  Aligned_cols=149  Identities=24%  Similarity=0.419  Sum_probs=127.3

Q ss_pred             CCCCeEEEEeCCcceeceecCCCC----------CC-------CceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEE
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCK----------DA-------DFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVV  201 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~----------~~-------d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIv  201 (315)
                      ..+|++||||||+|||||+..+..          ++       +|.+++.+++....+||++|||+++||++|+++|||+
T Consensus        23 ~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls~~yEiv  102 (442)
T 3ef1_A           23 QEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELH  102 (442)
T ss_dssp             HTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHTTTEEEE
T ss_pred             hcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHhCCcEEE
Confidence            378999999999999999986531          22       2566666778888999999999999999999999999


Q ss_pred             EEcCCchhhHHHHHHHhCCCCCeeeeEEE-ecceeeeCCccccccccc-CCCCCcEEEEECCchhhccCCCCeeeecccc
Q 021254          202 IFTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       202 IfTas~~~YA~~vL~~LDp~~~~f~~rl~-Re~C~~~~g~y~KDL~~L-grdl~~vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      ||||+.+.||++|++.|||.+.+|.+|+| |++|.   +.|+|||++| ||++++||||||+|.+|..|| |||+|.+|.
T Consensus       103 IfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg---~~~~KdL~~ll~rdl~~vvIIDd~p~~~~~~p-N~I~I~~~~  178 (442)
T 3ef1_A          103 IYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG---SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYE  178 (442)
T ss_dssp             EECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSS---CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-TEEECCCCC
T ss_pred             EEcCCCHHHHHHHHHHhccCCccccceEEEecCCC---CceeeehHHhcCCCcceEEEEECCHHHhCCCC-CEEEcCCcc
Confidence            99999999999999999999999999887 99993   4589999976 999999999999999999998 999999994


Q ss_pred             -----CCCCChHHHHHH
Q 021254          280 -----GDPSDSALLSLL  291 (315)
Q Consensus       280 -----~d~~D~eLl~L~  291 (315)
                           ||.+|+.|.+.-
T Consensus       179 fF~~~gD~n~~~l~~~~  195 (442)
T 3ef1_A          179 FFVGIGDINSNFLAKST  195 (442)
T ss_dssp             CSTTCCCSCC-------
T ss_pred             ccCCCCccccccccccc
Confidence                 788888776654

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.1e-32  Score=268.07  Aligned_cols=136  Identities=25%  Similarity=0.454  Sum_probs=120.4

Q ss_pred             CCCeEEEEeCCcceeceecCCCC----------C-------CCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEE
Q 021254          140 GLPITLVLDLDETLVHSSFDNCK----------D-------ADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVI  202 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~----------~-------~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvI  202 (315)
                      .+|++||||||||||||+..+..          +       .+|.+.+...+..+.+||++|||+++||++|+++|||+|
T Consensus        16 ~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~~~yeivI   95 (372)
T 3ef0_A           16 EKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHI   95 (372)
T ss_dssp             HTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHHTTEEEEE
T ss_pred             CCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHhcCcEEEE
Confidence            68999999999999999765421          1       135555556677889999999999999999999999999


Q ss_pred             EcCCchhhHHHHHHHhCCCCCeeeeEEE-ecceeeeCCccccccccc-CCCCCcEEEEECCchhhccCCCCeeeecccc
Q 021254          203 FTAGQSIYAGQLLDILDPNQTLIGQRVY-RDSCVFADGEYLKDLTIL-GRDLARIAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       203 fTas~~~YA~~vL~~LDp~~~~f~~rl~-Re~C~~~~g~y~KDL~~L-grdl~~vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      |||+.+.||++|++.|||.+++|.+|++ |++|.   +.|+|||+.| |+++++||||||+|.+|..|| |||+|++|.
T Consensus        96 ~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g---~~~~KdL~~L~~~dl~~viiiDd~~~~~~~~p-N~I~i~~~~  170 (372)
T 3ef0_A           96 YTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG---SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYE  170 (372)
T ss_dssp             ECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSS---CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-TEEECCCCC
T ss_pred             EeCCcHHHHHHHHHHhccCCceeeeEEEEecCCC---CcceecHHHhcCCCCceEEEEeCCHHHcCCCC-cEeeeCCcc
Confidence            9999999999999999999989998876 99983   3589999987 999999999999999999998 999999994

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.80  E-value=1.2e-09  Score=87.38  Aligned_cols=110  Identities=12%  Similarity=0.124  Sum_probs=87.2

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++|+||||..+.                        ...|++.++|++|++ .+.++|.|++...++..+++.++..
T Consensus         3 k~i~~D~DgtL~~~~------------------------~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~   58 (137)
T 2pr7_A            3 RGLIVDYAGVLDGTD------------------------EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN   58 (137)
T ss_dssp             CEEEECSTTTTSSCH------------------------HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred             cEEEEeccceecCCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence            579999999994321                        257999999999985 6999999999999999999998765


Q ss_pred             CCeeeeEEEecceeeeCC---cccccccccCCCCCcEEEEECCchhhccCCCCeeeecc
Q 021254          222 QTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       222 ~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      . +|...+..+.+...+.   .|.+-++.+|.+++++++|+|++.........|+..-.
T Consensus        59 ~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~  116 (137)
T 2pr7_A           59 G-VVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVY  116 (137)
T ss_dssp             T-SSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred             h-hccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEE
Confidence            4 7888887766555443   36667778899999999999999877666666764433

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.78  E-value=1.1e-08  Score=87.81  Aligned_cols=150  Identities=19%  Similarity=0.099  Sum_probs=98.4

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeee---eeeEeeCchHHHHHHHhhc-ccEEEEEcCCc-hhhHHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQ---TVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ-SIYAGQLLD  216 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~---~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~-~~YA~~vL~  216 (315)
                      .+.++|||||||+...........+.-  ...+...   .-.+...|++.++|++|.+ .+.++|.|++. ..++..+++
T Consensus        27 ~k~vifDlDGTL~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~  104 (187)
T 2wm8_A           27 PKLAVFDLDYTLWPFWVDTHVDPPFHK--SSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLE  104 (187)
T ss_dssp             CSEEEECSBTTTBSSCTTTSSCSCCEE--CTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHH
T ss_pred             cCEEEEcCCCCcchHHHhhccCcchhh--hcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHH
Confidence            468999999999854322111111110  0001000   1135678999999999985 69999999998 799999999


Q ss_pred             HhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCChHHHH-HHHHHh
Q 021254          217 ILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLS-LLMFLE  295 (315)
Q Consensus       217 ~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~eLl~-L~~~L~  295 (315)
                      .++... +|...+....  .....|.+-++.+|.+++++++|+|++.-.......|+..-.+.......++.+ |..|.+
T Consensus       105 ~~gl~~-~f~~~~~~~~--~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~l~~~~~  181 (187)
T 2wm8_A          105 LFDLFR-YFVHREIYPG--SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAK  181 (187)
T ss_dssp             HTTCTT-TEEEEEESSS--CHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCHHHHHHHHHHHHH
T ss_pred             HcCcHh-hcceeEEEeC--chHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence            998875 7876643221  111235666778899999999999998877666677887765554444444433 444444


Q ss_pred             h
Q 021254          296 T  296 (315)
Q Consensus       296 ~  296 (315)
                      .
T Consensus       182 ~  182 (187)
T 2wm8_A          182 A  182 (187)
T ss_dssp             T
T ss_pred             h
Confidence            3

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=98.75  E-value=1.2e-09  Score=94.20  Aligned_cols=93  Identities=18%  Similarity=0.209  Sum_probs=80.6

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.+. ..+.++|.|++...++..+++.++..+ +|+..++.+.+...+..   |.+-++.+|.+++++|
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~-~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l  161 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV  161 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEE
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc-cccccccccccCCCcccHHHHHHHHHhhCCCccceE
Confidence            567899999999997 679999999999999999999999876 89999998887766553   7888999999999999


Q ss_pred             EEECCchhhccCCCCeee
Q 021254          257 IVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~  274 (315)
                      +|+|++.-.......|+.
T Consensus       162 ~VgDs~~Di~aA~~aG~~  179 (216)
T 3kbb_A          162 VFEDSKSGVEAAKSAGIE  179 (216)
T ss_dssp             EEECSHHHHHHHHHTTCC
T ss_pred             EEecCHHHHHHHHHcCCc
Confidence            999999877656666664

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.72  E-value=1.2e-08  Score=87.84  Aligned_cols=124  Identities=17%  Similarity=0.041  Sum_probs=88.8

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCch---hhHHHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS---IYAGQLLDI  217 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~---~YA~~vL~~  217 (315)
                      -++++||+||||+......-... +        ....-.+...||+.++|++|.+ .+.++|.|++..   .++..+++.
T Consensus         3 ik~vifD~DgtL~~~~~~~y~~~-~--------~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~   73 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNTRYDHH-P--------LDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTN   73 (189)
T ss_dssp             CCEEEECTBTTTBCCCTTSSCSS-C--------GGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH
T ss_pred             ceEEEEcCCCceeeccchhhhhH-H--------HhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHh
Confidence            46899999999988422100000 0        0000115689999999999984 699999998877   899999999


Q ss_pred             hCCCCCeeeeEEEecce----eeeCC---cccccccccCCCCCcEEEEECC-chhhccCCCCeeee
Q 021254          218 LDPNQTLIGQRVYRDSC----VFADG---EYLKDLTILGRDLARIAIVDNT-PQVFQLQVDNGIPI  275 (315)
Q Consensus       218 LDp~~~~f~~rl~Re~C----~~~~g---~y~KDL~~Lgrdl~~vIIIDDs-p~~~~~q~~NgI~I  275 (315)
                      ++... +|..++..+..    ...+.   .|.+-+..+|.+++++++|+|+ +.-.......|+..
T Consensus        74 ~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~  138 (189)
T 3ib6_A           74 FGIID-YFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHA  138 (189)
T ss_dssp             TTCGG-GEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEE
T ss_pred             cCchh-heEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence            98876 89988887764    33333   3667778889999999999999 56554444455543

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=98.68  E-value=2e-08  Score=87.00  Aligned_cols=98  Identities=7%  Similarity=0.012  Sum_probs=80.2

Q ss_pred             eEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCC-c
Q 021254          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLA-R  254 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~-~  254 (315)
                      .+...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|...+..+.+...+.   .|.+-++.+|.+++ +
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  179 (231)
T 3kzx_A          101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH-YFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKE  179 (231)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTT
T ss_pred             cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh-heeeEEcccccCCCCCChHHHHHHHHHcCCCcccC
Confidence            35689999999999995 59999999999999999999998775 7888888877665543   36677788899998 9


Q ss_pred             EEEEECCchhhccCCCCeeeeccc
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +++|+|++.-.......|+....+
T Consensus       180 ~v~vGD~~~Di~~a~~aG~~~v~~  203 (231)
T 3kzx_A          180 VFFIGDSISDIQSAIEAGCLPIKY  203 (231)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEE
T ss_pred             EEEEcCCHHHHHHHHHCCCeEEEE
Confidence            999999998776666666655444

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.64  E-value=5.7e-08  Score=83.30  Aligned_cols=127  Identities=17%  Similarity=0.116  Sum_probs=88.6

Q ss_pred             CCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCC-----------
Q 021254          139 AGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAG-----------  206 (315)
Q Consensus       139 ~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas-----------  206 (315)
                      ....++++||+||||+.....     .|.  .     ...-.+...||+.++|++|.+ .|.++|.|++           
T Consensus        11 ~~~~k~~~~D~Dgtl~~~~~~-----~~~--~-----~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~   78 (176)
T 2fpr_A           11 GSSQKYLFIDRDGTLISEPPS-----DFQ--V-----DRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQA   78 (176)
T ss_dssp             --CCEEEEECSBTTTBCCC-------CCC--C-----CSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHH
T ss_pred             CCcCcEEEEeCCCCeEcCCCC-----CcC--c-----CCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchH
Confidence            367889999999999987421     000  0     001124578999999999984 6999999999           


Q ss_pred             ----chhhHHHHHHHhCCCCCeeeeEEEe-----cceeeeCC---cccccccccCCCCCcEEEEECCchhhccCCCCeee
Q 021254          207 ----QSIYAGQLLDILDPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       207 ----~~~YA~~vL~~LDp~~~~f~~rl~R-----e~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~  274 (315)
                          ...++..+++.++..   |..+++.     +.+...+.   .|.+-++.+|.+++++++|+|++.-.......|+.
T Consensus        79 ~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~  155 (176)
T 2fpr_A           79 DFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGIN  155 (176)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSE
T ss_pred             hhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCe
Confidence                678899999998764   7777654     55554433   46777888999999999999999877666677777


Q ss_pred             eccccC
Q 021254          275 IESWFG  280 (315)
Q Consensus       275 I~~f~~  280 (315)
                      .--+..
T Consensus       156 ~i~v~~  161 (176)
T 2fpr_A          156 GLRYDR  161 (176)
T ss_dssp             EEECBT
T ss_pred             EEEEcC
Confidence            654433

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.60  E-value=3.8e-08  Score=83.08  Aligned_cols=117  Identities=16%  Similarity=0.096  Sum_probs=84.9

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCch-------------
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQS-------------  208 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~-------------  208 (315)
                      +.++||+||||+.........              .-.+...||+.++|++|++ .+.++|.|++..             
T Consensus         2 k~v~~D~DGtL~~~~~~~~~~--------------~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~   67 (179)
T 3l8h_A            2 KLIILDRDGVVNQDSDAFVKS--------------PDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNA   67 (179)
T ss_dssp             CEEEECSBTTTBCCCTTCCCS--------------GGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHH
T ss_pred             CEEEEcCCCccccCCCccCCC--------------HHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHH
Confidence            578999999999864211100              0114468999999999984 699999999987             


Q ss_pred             --hhHHHHHHHhCCCCCeeeeEEEe-----cceeeeCC---cccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          209 --IYAGQLLDILDPNQTLIGQRVYR-----DSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       209 --~YA~~vL~~LDp~~~~f~~rl~R-----e~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                        .++..+++.++   .+|...++.     +.|...+.   .|.+-++.+|.+++++++|+|++.-.......|+..-
T Consensus        68 ~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i  142 (179)
T 3l8h_A           68 IHDKMHRALAQMG---GVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPW  142 (179)
T ss_dssp             HHHHHHHHHHHTT---CCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEE
T ss_pred             HHHHHHHHHHhCC---CceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEE
Confidence              67788888886   356666642     44444433   3667788889999999999999987766666676543

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=98.48  E-value=3.3e-08  Score=83.25  Aligned_cols=97  Identities=12%  Similarity=0.075  Sum_probs=78.4

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +..+|++.++|+++.+ .+.++|.|++...++..+++.++... +|...+..+.+...+.   .+.+-++.+|.++++++
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  166 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG-FFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL  166 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh-heeeEeecccccCCCCChHHHHHHHHHcCCChHHeE
Confidence            3678999999999995 59999999999999999999998775 7888888777655443   25677788899999999


Q ss_pred             EEECCchhhccCCCCeeeeccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      .|+|++.-.......|+.+-..
T Consensus       167 ~iGD~~~Di~~a~~aG~~~~~~  188 (214)
T 3e58_A          167 IIEDSEKGIAAGVAADVEVWAI  188 (214)
T ss_dssp             EEECSHHHHHHHHHTTCEEEEE
T ss_pred             EEeccHhhHHHHHHCCCEEEEE
Confidence            9999987665555666654443

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.47  E-value=1.7e-07  Score=80.08  Aligned_cols=92  Identities=15%  Similarity=0.093  Sum_probs=72.3

Q ss_pred             eEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCee--eeEEEecceeeeCC---cccccccccCCCCC
Q 021254          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLI--GQRVYRDSCVFADG---EYLKDLTILGRDLA  253 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f--~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~  253 (315)
                      .+...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|  ...+..+. ...+.   .+.+-++.+|.+++
T Consensus        68 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~~~  145 (205)
T 3m9l_A           68 GSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFAEADVLGRDE-APPKPHPGGLLKLAEAWDVSPS  145 (205)
T ss_dssp             EEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCCGG
T ss_pred             cCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCCHH
Confidence            46789999999999995 59999999999999999999998765 77  66665544 32222   35667778899999


Q ss_pred             cEEEEECCchhhccCCCCee
Q 021254          254 RIAIVDNTPQVFQLQVDNGI  273 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI  273 (315)
                      ++++|+|++.-.......|+
T Consensus       146 ~~i~iGD~~~Di~~a~~aG~  165 (205)
T 3m9l_A          146 RMVMVGDYRFDLDCGRAAGT  165 (205)
T ss_dssp             GEEEEESSHHHHHHHHHHTC
T ss_pred             HEEEECCCHHHHHHHHHcCC
Confidence            99999999986655445555

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=98.46  E-value=1.1e-08  Score=87.55  Aligned_cols=101  Identities=5%  Similarity=0.009  Sum_probs=81.0

Q ss_pred             eEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHH------hCCCCCeeeeEEEecceeeeCCc---ccccccccCC
Q 021254          180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI------LDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGR  250 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~------LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgr  250 (315)
                      .+...|++.++|+.+.+.+.++|.|++...++..+++.      ++... +|+..+..+.+...++.   |.+-++.+|.
T Consensus        87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~  165 (211)
T 2i6x_A           87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDS-FFDKVYASCQMGKYKPNEDIFLEMIADSGM  165 (211)
T ss_dssp             EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGG-GSSEEEEHHHHTCCTTSHHHHHHHHHHHCC
T ss_pred             hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHH-HcCeEEeecccCCCCCCHHHHHHHHHHhCC
Confidence            45778999999999998999999999999999999887      45543 78888887766555543   5667778899


Q ss_pred             CCCcEEEEECCchhhccCCCCeeeeccccCC
Q 021254          251 DLARIAIVDNTPQVFQLQVDNGIPIESWFGD  281 (315)
Q Consensus       251 dl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d  281 (315)
                      +++++++|+|++.-.......|+.+-.+...
T Consensus       166 ~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~  196 (211)
T 2i6x_A          166 KPEETLFIDDGPANVATAERLGFHTYCPDNG  196 (211)
T ss_dssp             CGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred             ChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence            9999999999999876666778776555443

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.44  E-value=4.7e-08  Score=83.66  Aligned_cols=95  Identities=14%  Similarity=0.175  Sum_probs=75.8

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceee----------e--CC-ccccccc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF----------A--DG-EYLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~----------~--~g-~y~KDL~  246 (315)
                      +..+|++.++|+.+.+ .+.++|.|++...++..+++.++... +|...+..++...          .  ++ .+.+-++
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~  152 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA-AFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR  152 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch-hccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence            5689999999999995 59999999999999999999998875 7888775444211          0  11 2456667


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      .+|.++++++.|+|++.-.......|+.+-
T Consensus       153 ~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~  182 (217)
T 3m1y_A          153 LLNISKTNTLVVGDGANDLSMFKHAHIKIA  182 (217)
T ss_dssp             HHTCCSTTEEEEECSGGGHHHHTTCSEEEE
T ss_pred             HcCCCHhHEEEEeCCHHHHHHHHHCCCeEE
Confidence            789999999999999987777777888774

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.43  E-value=1.9e-07  Score=77.83  Aligned_cols=114  Identities=11%  Similarity=0.071  Sum_probs=82.9

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++|+||||+.+......             .....-...|+..++|+++.+ .+.++|.|++...++..+++.++.
T Consensus         9 ~k~v~~DlDGTL~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl   75 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLYYTE-------------HGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGV   75 (162)
T ss_dssp             CCEEEECCTTTTSCSEEEEET-------------TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTC
T ss_pred             eeEEEEecCcceECCceeecC-------------CCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCC
Confidence            467999999999986431000             111223457899999999995 699999999999999999999976


Q ss_pred             CCCeeeeEEEecceeeeCC-cccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          221 NQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       221 ~~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      .. +|..       ...++ .+.+-+..+|.+++++++|+|++.-.......|+.+-
T Consensus        76 ~~-~~~~-------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~  124 (162)
T 2p9j_A           76 EE-IYTG-------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVA  124 (162)
T ss_dssp             CE-EEEC-------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             Hh-hccC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence            64 5542       11122 2445667789999999999999987766666777654

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.42  E-value=7.2e-08  Score=84.37  Aligned_cols=121  Identities=12%  Similarity=0.054  Sum_probs=83.3

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +.+.++||+||||++-... .....+.         ....+...||+.++|++|+ +.+.++|-|+.....+..++.   
T Consensus         5 ~~kav~fDlDGTL~d~~~~-~~~~~~~---------~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---   71 (196)
T 2oda_A            5 TFPALLFGLSGCLVDFGAQ-AATSDTP---------DDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---   71 (196)
T ss_dssp             CCSCEEEETBTTTBCTTST-TTSCSSC---------CGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---
T ss_pred             cCCEEEEcCCCceEecccc-ccchhhc---------ccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---
Confidence            3568999999999972111 1111110         1112346799999999998 579999999998888755443   


Q ss_pred             CCCCeeeeEEEecceeeeCC---cccccccccCCCC-CcEEEEECCchhhccCCCCeeeecc
Q 021254          220 PNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDL-ARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       220 p~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl-~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                         .+|..++..+++...+.   .|.+-+..+|.++ +++|+|.|++.-.......|+....
T Consensus        72 ---~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~  130 (196)
T 2oda_A           72 ---PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIG  130 (196)
T ss_dssp             ---TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEE
T ss_pred             ---ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEE
Confidence               25666777676554443   3677788889875 8999999999877666667765543

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=98.42  E-value=3.8e-08  Score=85.37  Aligned_cols=97  Identities=12%  Similarity=0.035  Sum_probs=79.1

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|...+..+.+...+.   .|.+-++.+|.++++++
T Consensus       103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i  181 (237)
T 4ex6_A          103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT-RLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCV  181 (237)
T ss_dssp             GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG-TCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh-heeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            3478999999999995 69999999999999999999998765 7888888777655443   26677788899999999


Q ss_pred             EEECCchhhccCCCCeeeeccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +|+|++.-.......|+..-.+
T Consensus       182 ~vGD~~~Di~~a~~aG~~~i~v  203 (237)
T 4ex6_A          182 VIGDGVPDAEMGRAAGMTVIGV  203 (237)
T ss_dssp             EEESSHHHHHHHHHTTCEEEEE
T ss_pred             EEcCCHHHHHHHHHCCCeEEEE
Confidence            9999998776666777754443

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.41  E-value=2.9e-08  Score=85.70  Aligned_cols=96  Identities=13%  Similarity=0.022  Sum_probs=78.1

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|...+..+.+...++.   |.+-++.+|.++++++
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  176 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG-LFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL  176 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT-TCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh-hcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence            5678999999999995 59999999999999999999998775 78888888776655543   6777788999999999


Q ss_pred             EEECCchhhccCCCCeeeecc
Q 021254          257 IVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~  277 (315)
                      +|+|+..-.......|+.+-.
T Consensus       177 ~vGD~~~Di~~a~~~G~~~~~  197 (233)
T 3umb_A          177 FVSSNGWDACGATWHGFTTFW  197 (233)
T ss_dssp             EEESCHHHHHHHHHHTCEEEE
T ss_pred             EEeCCHHHHHHHHHcCCEEEE
Confidence            999998766544455555433

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.40  E-value=1.2e-07  Score=82.79  Aligned_cols=93  Identities=15%  Similarity=0.130  Sum_probs=74.1

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      +..+||+.++|+++.+ .+.++|.|++...++..+++.++... +|...+..+.+...++.   |.+-++.+|.++++++
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  182 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR-VLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC  182 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH-HcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            4567999999999984 69999999999999999999998765 78888887776554443   5666788899999999


Q ss_pred             EEECCchhhccCCCCeee
Q 021254          257 IVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~  274 (315)
                      +|+|++.-.......|+.
T Consensus       183 ~iGD~~~Di~~a~~aG~~  200 (240)
T 2no4_A          183 FVSSNAWDLGGAGKFGFN  200 (240)
T ss_dssp             EEESCHHHHHHHHHHTCE
T ss_pred             EEeCCHHHHHHHHHCCCE
Confidence            999998655444444533

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.39  E-value=1.3e-07  Score=81.87  Aligned_cols=94  Identities=13%  Similarity=0.060  Sum_probs=75.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+. +.+.++|.|++...++..+++.++... +|...+..+.+...+..   |.+-++.+|.++++++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  172 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL  172 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh-hhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            467899999999998 469999999999999999999988765 78888887776655543   5666788899999999


Q ss_pred             EEECCchhhccCCCCeeee
Q 021254          257 IVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I  275 (315)
                      +|+|++.-.......|+.+
T Consensus       173 ~iGD~~~Di~~a~~aG~~~  191 (232)
T 1zrn_A          173 FVASNAWDATGARYFGFPT  191 (232)
T ss_dssp             EEESCHHHHHHHHHHTCCE
T ss_pred             EEeCCHHHHHHHHHcCCEE
Confidence            9999986554444445443

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.39  E-value=3.7e-07  Score=80.07  Aligned_cols=116  Identities=16%  Similarity=0.094  Sum_probs=83.2

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc------------
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ------------  207 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~------------  207 (315)
                      +.+.++||+||||+....       +.      ..  .-.+...||+.++|++|. +.+.++|.|++.            
T Consensus        24 ~~k~v~~D~DGTL~~~~~-------~~------~~--~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~   88 (211)
T 2gmw_A           24 SVPAIFLDRDGTINVDHG-------YV------HE--IDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQF   88 (211)
T ss_dssp             CBCEEEECSBTTTBCCCS-------SC------CS--GGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHH
T ss_pred             cCCEEEEcCCCCeECCCC-------cc------cC--cccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHH
Confidence            456899999999997531       10      00  011346899999999998 579999999999            


Q ss_pred             ---hhhHHHHHHHhCCCCCeeeeEEEe------------cceeeeCC---cccccccccCCCCCcEEEEECCchhhccCC
Q 021254          208 ---SIYAGQLLDILDPNQTLIGQRVYR------------DSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQV  269 (315)
Q Consensus       208 ---~~YA~~vL~~LDp~~~~f~~rl~R------------e~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~  269 (315)
                         ..++..+++.++..   |...++.            +.+...+.   .|.+-++.+|.+++++++|+|++.-.....
T Consensus        89 ~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~  165 (211)
T 2gmw_A           89 ETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAV  165 (211)
T ss_dssp             HHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCc---eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHH
Confidence               58899999988764   5555542            22333332   255667788999999999999998776555


Q ss_pred             CCeee
Q 021254          270 DNGIP  274 (315)
Q Consensus       270 ~NgI~  274 (315)
                      ..|+.
T Consensus       166 ~aG~~  170 (211)
T 2gmw_A          166 AANVG  170 (211)
T ss_dssp             HTTCS
T ss_pred             HCCCc
Confidence            66643

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=98.37  E-value=8.5e-08  Score=85.42  Aligned_cols=94  Identities=11%  Similarity=0.050  Sum_probs=76.3

Q ss_pred             eeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          182 RQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       182 ~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      ...||+.++|+.+. +.+.++|.|++.  .+..+++.++... +|+.++..++....+.   .|.+-++.+|.++++||+
T Consensus        95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~-~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  171 (243)
T 4g9b_A           95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELRE-FFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG  171 (243)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGG-GCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhcc-ccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence            46799999999998 679999999864  5788999998875 8998888887766554   388899999999999999


Q ss_pred             EECCchhhccCCCCeeeeccc
Q 021254          258 VDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~f  278 (315)
                      |+|++.-.......|+.....
T Consensus       172 VgDs~~di~aA~~aG~~~I~V  192 (243)
T 4g9b_A          172 IEDAQAGIDAINASGMRSVGI  192 (243)
T ss_dssp             EESSHHHHHHHHHHTCEEEEE
T ss_pred             EcCCHHHHHHHHHcCCEEEEE
Confidence            999998776566666655433

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.35  E-value=3.8e-08  Score=84.64  Aligned_cols=96  Identities=11%  Similarity=0.024  Sum_probs=76.7

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|+..+..+.+...+.   .|.+-++.+|.++++++
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  173 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN-SFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL  173 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG-GCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh-hcceeEehhhcccCCCChHHHHHHHHHhCCCcccEE
Confidence            4568999999999995 59999999999999999999998765 7888888777655443   26677788899999999


Q ss_pred             EEECCchhhccCCCCeeeecc
Q 021254          257 IVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~  277 (315)
                      +|+|++.-.......|+.+-.
T Consensus       174 ~iGD~~~Di~~a~~aG~~~~~  194 (230)
T 3um9_A          174 FVSCNSWDATGAKYFGYPVCW  194 (230)
T ss_dssp             EEESCHHHHHHHHHHTCCEEE
T ss_pred             EEeCCHHHHHHHHHCCCEEEE
Confidence            999999765444455554433

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=98.35  E-value=6.5e-08  Score=82.80  Aligned_cols=95  Identities=13%  Similarity=0.075  Sum_probs=73.7

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeee-eEEEecceee-----eC-CcccccccccCCCCC
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG-QRVYRDSCVF-----AD-GEYLKDLTILGRDLA  253 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~-~rl~Re~C~~-----~~-g~y~KDL~~Lgrdl~  253 (315)
                      +..+||+.++|+++.+.+.++|.|++...++..+++.++... +|. ...+.++...     .+ ..+.+-++.+|..++
T Consensus        68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~  146 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  146 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred             cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcc-eecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence            567999999999999669999999999999999999998875 784 4455444321     12 235666777888889


Q ss_pred             cEEEEECCchhhccCCCCeeeec
Q 021254          254 RIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      ++++|+|++.-.......|+.+-
T Consensus       147 ~~~~iGD~~~Di~~a~~aG~~~~  169 (206)
T 1rku_A          147 RVIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             EEEEEECSSTTHHHHHHSSEEEE
T ss_pred             EEEEEeCChhhHHHHHhcCccEE
Confidence            99999999987766666777654

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=98.35  E-value=1.9e-07  Score=80.42  Aligned_cols=95  Identities=16%  Similarity=0.137  Sum_probs=76.8

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.++|+.+.+.+.++|.|++...++..+++.++... +|+..+..+.+...++.   +.+-+..+|.+++++++
T Consensus        99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKD-LFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (234)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHH-HcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEE
Confidence            457899999999999559999999999999999999998765 78888887776655543   66777888999999999


Q ss_pred             EECCc-hhhccCCCCeeeec
Q 021254          258 VDNTP-QVFQLQVDNGIPIE  276 (315)
Q Consensus       258 IDDsp-~~~~~q~~NgI~I~  276 (315)
                      |+|++ .-.......|+.+-
T Consensus       178 vGD~~~~Di~~a~~aG~~~~  197 (234)
T 3u26_A          178 VGDNPVKDCGGSKNLGMTSI  197 (234)
T ss_dssp             EESCTTTTHHHHHTTTCEEE
T ss_pred             EcCCcHHHHHHHHHcCCEEE
Confidence            99998 54555556665433

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=98.33  E-value=3.3e-07  Score=78.62  Aligned_cols=96  Identities=10%  Similarity=0.068  Sum_probs=78.4

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|...+..+.....++   .+.+-++.+|.++++++
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i  163 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF-YFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAI  163 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh-heeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence            4678999999999995 59999999999999999999998765 7888888776554333   25667778899999999


Q ss_pred             EEECCchhhccCCCCeeeecc
Q 021254          257 IVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~  277 (315)
                      .|+|++.-.......|+..-.
T Consensus       164 ~iGD~~~Di~~a~~aG~~~i~  184 (226)
T 3mc1_A          164 MIGDREYDVIGALKNNLPSIG  184 (226)
T ss_dssp             EEESSHHHHHHHHTTTCCEEE
T ss_pred             EECCCHHHHHHHHHCCCCEEE
Confidence            999999877666677774433

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=98.33  E-value=1.8e-07  Score=83.58  Aligned_cols=94  Identities=12%  Similarity=0.031  Sum_probs=75.5

Q ss_pred             eeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          182 RQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       182 ~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      ...||+.++|+.++ ..+.+++-|+  ...+..+++.++... +|+.++..+.+...+..   |.+-++.+|.++++||+
T Consensus       116 ~~~p~~~~ll~~Lk~~g~~i~i~~~--~~~~~~~L~~~gl~~-~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  192 (250)
T 4gib_A          116 DILPGIESLLIDVKSNNIKIGLSSA--SKNAINVLNHLGISD-KFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIG  192 (250)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCS--CTTHHHHHHHHTCGG-GCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             ccchhHHHHHHHHHhcccccccccc--cchhhhHhhhccccc-ccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEE
Confidence            46799999999998 5677776544  456888999998875 89999888887766653   78889999999999999


Q ss_pred             EECCchhhccCCCCeeeeccc
Q 021254          258 VDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~f  278 (315)
                      |+|++.-.......|+..-.+
T Consensus       193 VGDs~~Di~aA~~aG~~~i~v  213 (250)
T 4gib_A          193 IEDASAGIDAINSANMFSVGV  213 (250)
T ss_dssp             EESSHHHHHHHHHTTCEEEEE
T ss_pred             ECCCHHHHHHHHHcCCEEEEE
Confidence            999998776666777765533

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=98.31  E-value=1.2e-07  Score=84.15  Aligned_cols=93  Identities=14%  Similarity=0.090  Sum_probs=75.5

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.++|+.+. .+.++|.|++...++..+++.++... +|+..+..+.+...+..   |.+-++.+|.+++++++
T Consensus        92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  169 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTD-SFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (253)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchh-hccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            457899999999999 99999999999999999999998764 78888888776555543   66777888999999999


Q ss_pred             EECCchhhccCCCCeeee
Q 021254          258 VDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I  275 (315)
                      |+|++.-.......|+.+
T Consensus       170 vGD~~~Di~~a~~aG~~~  187 (253)
T 1qq5_A          170 VSSNGFDVGGAKNFGFSV  187 (253)
T ss_dssp             EESCHHHHHHHHHHTCEE
T ss_pred             EeCChhhHHHHHHCCCEE
Confidence            999986554444445443

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=98.30  E-value=1.7e-07  Score=80.52  Aligned_cols=95  Identities=15%  Similarity=0.052  Sum_probs=77.9

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+++.+ .+.++|.|++...++..+++.++... +|+..+..+.+...+.   .+.+-++.+|.++++++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i  168 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI-NKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECL  168 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT-TSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh-hhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEE
Confidence            5789999999999985 59999999999999999999998775 7888888777654443   25677788899999999


Q ss_pred             EEECCchhhccCCCCeeeec
Q 021254          257 IVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~  276 (315)
                      .|+|++.-.......|+...
T Consensus       169 ~iGD~~~Di~~a~~aG~~~i  188 (233)
T 3s6j_A          169 VIGDAIWDMLAARRCKATGV  188 (233)
T ss_dssp             EEESSHHHHHHHHHTTCEEE
T ss_pred             EEeCCHHhHHHHHHCCCEEE
Confidence            99999987766666666433

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.30  E-value=8.4e-08  Score=81.80  Aligned_cols=93  Identities=12%  Similarity=0.026  Sum_probs=73.5

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      +...||+.+ |+.+++.+.++|.|++...++..+++.++... +|...+..+.+...+..   |.+-++.+|  ++++++
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~  148 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLR-YFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFL  148 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEE
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHH-hCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEE
Confidence            467899999 99998449999999999999999999998765 78888887776555532   556667788  899999


Q ss_pred             EECCchhhccCCCCeeeecc
Q 021254          258 VDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~  277 (315)
                      |+|++.-.......|+.+-.
T Consensus       149 vGD~~~Di~~a~~aG~~~~~  168 (201)
T 2w43_A          149 VSSNAFDVIGAKNAGMRSIF  168 (201)
T ss_dssp             EESCHHHHHHHHHTTCEEEE
T ss_pred             EeCCHHHhHHHHHCCCEEEE
Confidence            99999866555566665433

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=98.27  E-value=5.7e-07  Score=78.37  Aligned_cols=97  Identities=10%  Similarity=-0.001  Sum_probs=79.0

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCC-CCcE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRD-LARI  255 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrd-l~~v  255 (315)
                      +..+|++.++|+++.+ .+.++|.|++...++..+++.++... +|...+..+.+...++   .+.+-++.+|.+ ++++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~  187 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR-YFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKV  187 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGE
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh-hEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcE
Confidence            5689999999999995 59999999999999999999998875 7888888877655443   255667788999 9999


Q ss_pred             EEEECCchhhccCCCCeeeeccc
Q 021254          256 AIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      ++|+|++.-.......|+..-..
T Consensus       188 i~vGD~~~Di~~a~~aG~~~i~v  210 (240)
T 3sd7_A          188 IMVGDRKYDIIGAKKIGIDSIGV  210 (240)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEE
T ss_pred             EEECCCHHHHHHHHHCCCCEEEE
Confidence            99999998776666667644433

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.26  E-value=9.4e-08  Score=83.32  Aligned_cols=100  Identities=10%  Similarity=0.011  Sum_probs=79.4

Q ss_pred             eeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHh---CCCC--CeeeeEEEecceeeeCC---cccccccccCCCCC
Q 021254          182 RQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDIL---DPNQ--TLIGQRVYRDSCVFADG---EYLKDLTILGRDLA  253 (315)
Q Consensus       182 ~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~L---Dp~~--~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~  253 (315)
                      ...|++.++|+.+.+.+.++|.|++...++..+++.+   ...+  .+|...+..+.+...++   .|.+-++.+|.+++
T Consensus       112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~  191 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPK  191 (229)
T ss_dssp             CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHH
Confidence            3579999999999966999999999999999888666   3332  26888888777666554   36677888899999


Q ss_pred             cEEEEECCchhhccCCCCeeeeccccCC
Q 021254          254 RIAIVDNTPQVFQLQVDNGIPIESWFGD  281 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI~I~~f~~d  281 (315)
                      ++|+|+|++.-.......|+.+-.+...
T Consensus       192 ~~~~vGD~~~Di~~a~~aG~~~i~v~~~  219 (229)
T 4dcc_A          192 ETFFIDDSEINCKVAQELGISTYTPKAG  219 (229)
T ss_dssp             GEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred             HeEEECCCHHHHHHHHHcCCEEEEECCH
Confidence            9999999998777677788877655543

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=98.22  E-value=1.3e-06  Score=78.47  Aligned_cols=94  Identities=15%  Similarity=0.130  Sum_probs=75.7

Q ss_pred             EeeCchHHHHHHHhhc-cc--EEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeee----CC---cccccccccCC
Q 021254          181 VRQRPYLHMFLEAVAS-MF--DVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA----DG---EYLKDLTILGR  250 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~f--EIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~----~g---~y~KDL~~Lgr  250 (315)
                      +...|++.++|+.+.+ .+  .++|.|++...++..+++.++... +|+..++.+.+...    +.   .|.+-++.+|.
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi  219 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGL  219 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTC
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc-ccceEEEeccCCCcccCCCcCHHHHHHHHHHcCC
Confidence            5678999999999995 78  999999999999999999998876 79888876554221    22   25667778899


Q ss_pred             CC-CcEEEEECCchhhccCCCCeeee
Q 021254          251 DL-ARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       251 dl-~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      ++ +++|+|+|++.-.......|+.+
T Consensus       220 ~~~~~~i~vGD~~~Di~~a~~aG~~~  245 (282)
T 3nuq_A          220 ARYENAYFIDDSGKNIETGIKLGMKT  245 (282)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCSE
T ss_pred             CCcccEEEEcCCHHHHHHHHHCCCeE
Confidence            98 99999999998776666667733

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=98.19  E-value=1.7e-07  Score=82.89  Aligned_cols=95  Identities=13%  Similarity=-0.024  Sum_probs=76.8

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeee-EEEeccee-eeCC---cccccccccCCCCCc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQ-RVYRDSCV-FADG---EYLKDLTILGRDLAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~-rl~Re~C~-~~~g---~y~KDL~~Lgrdl~~  254 (315)
                      +...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|.. .+..+.+. ..+.   .|.+-++.+|.++++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  187 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPER  187 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGG
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHH
Confidence            5689999999999995 79999999999999999999998765 7887 77666655 4443   256677888999999


Q ss_pred             EEEEECCchhhccCCCCeeeec
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      +|+|+|++.-.......|+.+-
T Consensus       188 ~i~iGD~~~Di~~a~~aG~~~i  209 (259)
T 4eek_A          188 CVVIEDSVTGGAAGLAAGATLW  209 (259)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEE
T ss_pred             EEEEcCCHHHHHHHHHCCCEEE
Confidence            9999999987765556666633

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=98.18  E-value=3.1e-08  Score=84.14  Aligned_cols=99  Identities=13%  Similarity=0.088  Sum_probs=76.5

Q ss_pred             eEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHH-hCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCc
Q 021254          180 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDI-LDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLAR  254 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~-LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~  254 (315)
                      ++...|++.++|+++. +.+.++|.|++...++..++.. ++... +|...+..+.+...++.   |.+-++.+|.++++
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  167 (206)
T 2b0c_A           89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD-AADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD  167 (206)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH-HCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhh-heeeEEEecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            3678999999999999 6799999999988887766655 43332 67777776665555543   66677888999999


Q ss_pred             EEEEECCchhhccCCCCeeeecccc
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      +++|+|++.........|+.+-.+.
T Consensus       168 ~~~vgD~~~Di~~a~~aG~~~~~~~  192 (206)
T 2b0c_A          168 TVFFDDNADNIEGANQLGITSILVK  192 (206)
T ss_dssp             EEEEESCHHHHHHHHTTTCEEEECC
T ss_pred             eEEeCCCHHHHHHHHHcCCeEEEec
Confidence            9999999987766677788765544

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.17  E-value=1.5e-06  Score=81.82  Aligned_cols=95  Identities=15%  Similarity=0.165  Sum_probs=73.5

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeee----------C---Cccccccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA----------D---GEYLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~----------~---g~y~KDL~  246 (315)
                      +..+||+.++|++|+ +.+.++|.|++...+++.+++.++... +|...+..+...+.          +   ..+.+-++
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~  256 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-AFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA  256 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-EEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence            568999999999999 569999999999999999999998875 77766653321111          1   12455667


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      .+|.+++++++|.|++.-.......|+.+-
T Consensus       257 ~lgv~~~~~i~VGDs~~Di~aa~~AG~~va  286 (317)
T 4eze_A          257 RLNIATENIIACGDGANDLPMLEHAGTGIA  286 (317)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HcCCCcceEEEEeCCHHHHHHHHHCCCeEE
Confidence            789999999999999987766666676553

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.16  E-value=3.9e-06  Score=72.61  Aligned_cols=95  Identities=7%  Similarity=0.052  Sum_probs=69.1

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCC-CeeeeEEEec--------ceee------eCC-cccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVYRD--------SCVF------ADG-EYLK  243 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~-~~f~~rl~Re--------~C~~------~~g-~y~K  243 (315)
                      +..+||+.++|++++ +.+.++|.|++...++..+++.++... .+|...++.+        +...      .++ .+.+
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~  164 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  164 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence            568899999999998 569999999999999999999998763 4787665211        1000      111 1333


Q ss_pred             cccccCCCCCcEEEEECCchhhccCCCCeeeeccc
Q 021254          244 DLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       244 DL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      -+..+|.  +++++|+|++.-.......|+ ...|
T Consensus       165 ~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~  196 (225)
T 1nnl_A          165 LKEKFHF--KKIIMIGDGATDMEACPPADA-FIGF  196 (225)
T ss_dssp             HHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEE
T ss_pred             HHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEe
Confidence            3445565  789999999988877777888 4445

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.16  E-value=1.7e-06  Score=72.03  Aligned_cols=116  Identities=13%  Similarity=-0.014  Sum_probs=80.2

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.++||+||||+++........          .. -.-+..++++  .|++++ ..+.++|.|+.....+..+++.++.
T Consensus         4 ik~vifD~DGTL~~~~~~~~~~~----------~~-~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl   70 (164)
T 3e8m_A            4 IKLILTDIDGVWTDGGMFYDQTG----------NE-WKKFNTSDSA--GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKV   70 (164)
T ss_dssp             CCEEEECSTTTTSSSEEEECSSS----------CE-EEEEEGGGHH--HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTC
T ss_pred             ceEEEEcCCCceEcCcEEEcCCC----------cE-EEEecCChHH--HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCC
Confidence            46899999999999752111100          00 0112234443  788988 5699999999999999999999977


Q ss_pred             CCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeecc
Q 021254          221 NQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       221 ~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      .. +|...      ......+.+-++.+|.+++++++|.|++.-.......|+.+-.
T Consensus        71 ~~-~~~~~------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~  120 (164)
T 3e8m_A           71 DY-LFQGV------VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP  120 (164)
T ss_dssp             SE-EECSC------SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC
T ss_pred             CE-eeccc------CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc
Confidence            64 45431      1111235566677899999999999999877666777776654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=98.14  E-value=6e-07  Score=79.25  Aligned_cols=97  Identities=13%  Similarity=-0.049  Sum_probs=76.6

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCC-CcE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDL-ARI  255 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl-~~v  255 (315)
                      +...|++.++|+.+.+ .+.++|.|++...++..+++.++..+..|...+..+.+...+.   .+.+-++.+|.++ +++
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  189 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC  189 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGE
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccE
Confidence            4678999999999994 5999999999999999999998766522777777776554443   2667778889999 999


Q ss_pred             EEEECCchhhccCCCCeeeecc
Q 021254          256 AIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      |+|.|++.-.......|+.+-.
T Consensus       190 i~vGD~~~Di~~a~~aG~~~v~  211 (277)
T 3iru_A          190 IKVDDTLPGIEEGLRAGMWTVG  211 (277)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEE
T ss_pred             EEEcCCHHHHHHHHHCCCeEEE
Confidence            9999999877666667754433

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=98.13  E-value=4.5e-07  Score=79.21  Aligned_cols=95  Identities=9%  Similarity=0.024  Sum_probs=74.8

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.++|+.+.+.+.++|.|++...++..+++.++..   |+..+..+.+...+.   .|.+-+..+|.+++++++
T Consensus       119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  195 (254)
T 3umc_A          119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVML  195 (254)
T ss_dssp             CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEE
Confidence            35679999999999977999999999999999999999764   776666655444333   266777888999999999


Q ss_pred             EECCchhhccCCCCeeeeccc
Q 021254          258 VDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~f  278 (315)
                      |+|+..-.......|+.+-..
T Consensus       196 iGD~~~Di~~a~~aG~~~~~~  216 (254)
T 3umc_A          196 CAAHNYDLKAARALGLKTAFI  216 (254)
T ss_dssp             EESCHHHHHHHHHTTCEEEEE
T ss_pred             EcCchHhHHHHHHCCCeEEEE
Confidence            999987665555666665444

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.10  E-value=7e-06  Score=71.16  Aligned_cols=93  Identities=13%  Similarity=0.029  Sum_probs=66.2

Q ss_pred             eeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeee---C-Cc---------ccccccc
Q 021254          182 RQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA---D-GE---------YLKDLTI  247 (315)
Q Consensus       182 ~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~---~-g~---------y~KDL~~  247 (315)
                      .++||+.++|+.+. +.+.++|.|++...+++.+++.++... +|...+...+..+.   . ..         +.+-+..
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~  170 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG  170 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence            46999999999998 579999999999999999999998764 66655432221111   0 11         1133345


Q ss_pred             cC---CCCCcEEEEECCchhhccCCCCeeee
Q 021254          248 LG---RDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       248 Lg---rdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      +|   .+++++++|.|++.-...-...|+++
T Consensus       171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~  201 (232)
T 3fvv_A          171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPI  201 (232)
T ss_dssp             TTCCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred             cCCCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence            68   88999999999998665444445544

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.07  E-value=2.7e-06  Score=74.54  Aligned_cols=116  Identities=17%  Similarity=0.073  Sum_probs=80.9

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch-----------
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS-----------  208 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~-----------  208 (315)
                      ..+.+++|+||||+....-. .            .  .......||+.++|++|. +.+.++|.|++..           
T Consensus        30 ~~k~i~~D~DGtl~~~~~y~-~------------~--~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~   94 (218)
T 2o2x_A           30 HLPALFLDRDGTINVDTDYP-S------------D--PAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAF   94 (218)
T ss_dssp             SCCCEEECSBTTTBCCCSCT-T------------C--GGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHH
T ss_pred             cCCEEEEeCCCCcCCCCccc-C------------C--cccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHH
Confidence            35679999999999763100 0            0  011346899999999998 5799999999988           


Q ss_pred             ----hhHHHHHHHhCCCCCeeeeEEEe------------cceeeeCC---cccccccccCCCCCcEEEEECCchhhccCC
Q 021254          209 ----IYAGQLLDILDPNQTLIGQRVYR------------DSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQV  269 (315)
Q Consensus       209 ----~YA~~vL~~LDp~~~~f~~rl~R------------e~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~  269 (315)
                          ..+..+++.++..   |...+..            +.+...+.   .|.+-++.+|.+++++++|.|+..-.....
T Consensus        95 ~~~~~~~~~~l~~~gl~---~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~  171 (218)
T 2o2x_A           95 AAVNGRVLELLREEGVF---VDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGK  171 (218)
T ss_dssp             HHHHHHHHHHHHHTTCC---CSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCc---eeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHH
Confidence                7888889888643   4433322            33333332   255667788999999999999997665555


Q ss_pred             CCeee
Q 021254          270 DNGIP  274 (315)
Q Consensus       270 ~NgI~  274 (315)
                      ..|+.
T Consensus       172 ~aG~~  176 (218)
T 2o2x_A          172 RAGLA  176 (218)
T ss_dssp             HTTCS
T ss_pred             HCCCC
Confidence            55644

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.06  E-value=8.4e-06  Score=79.49  Aligned_cols=108  Identities=16%  Similarity=0.106  Sum_probs=79.5

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc------------
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ------------  207 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~------------  207 (315)
                      ..+.++||+||||+......    .|.       ....-+...-||+.++|+.|. +.|.++|.|+..            
T Consensus        57 ~~k~v~fD~DGTL~~~~~~~----~~~-------~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~  125 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRSGK----VFP-------TSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVF  125 (416)
T ss_dssp             CSSEEEECSBTTTEECSSCS----SSC-------SSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHH
T ss_pred             CCeEEEEeCCCCccccCCCc----cCC-------CCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHH
Confidence            45789999999999764210    000       000112336799999999998 569999999965            


Q ss_pred             hhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccC----CCCCcEEEEECCc
Q 021254          208 SIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILG----RDLARIAIVDNTP  262 (315)
Q Consensus       208 ~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lg----rdl~~vIIIDDsp  262 (315)
                      ..++..+++.++.   .|...+..+.|...+.   .|.+-+..+|    .+++++++|.|+.
T Consensus       126 ~~~~~~~l~~lgl---~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~  184 (416)
T 3zvl_A          126 KGKVEAVLEKLGV---PFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA  184 (416)
T ss_dssp             HHHHHHHHHHHTS---CCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred             HHHHHHHHHHcCC---CEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence            3448888999876   3788888888776654   3667777787    8999999999997

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.05  E-value=1.5e-06  Score=75.21  Aligned_cols=114  Identities=12%  Similarity=0.016  Sum_probs=78.2

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +.+.+|||+||||+++...-..          .+.. -..+..+++.  +|++|. ..+.++|.|+.....+..+++.++
T Consensus        18 ~ik~vifD~DGTL~d~~~~~~~----------~~~~-~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lg   84 (189)
T 3mn1_A           18 AIKLAVFDVDGVLTDGRLYFME----------DGSE-IKTFNTLDGQ--GIKMLIASGVTTAIISGRKTAIVERRAKSLG   84 (189)
T ss_dssp             TCCEEEECSTTTTSCSEEEEET----------TSCE-EEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHT
T ss_pred             hCCEEEEcCCCCcCCccEeecc----------CCcE-eeeeccccHH--HHHHHHHCCCEEEEEECcChHHHHHHHHHcC
Confidence            4568999999999997431100          1111 1122344444  899998 579999999999999999999998


Q ss_pred             CCCCeeeeEEEecceeeeCC-cccccccccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          220 PNQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       220 p~~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      ... +|...       ..++ .+.+-++.+|.+++++++|.|++.-...-...|+.+
T Consensus        85 l~~-~f~~~-------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~  133 (189)
T 3mn1_A           85 IEH-LFQGR-------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGM  133 (189)
T ss_dssp             CSE-EECSC-------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             CHH-HhcCc-------CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeE
Confidence            764 55432       1222 244555677999999999999998665444555554

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.04  E-value=3.5e-06  Score=71.92  Aligned_cols=115  Identities=8%  Similarity=0.032  Sum_probs=80.2

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      ..+.+++|+||||+++...          +..   .....-...|...+.|+++. +.+.++|.|......+..+++.++
T Consensus         7 ~ik~i~~DlDGTL~~~~~~----------~~~---~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lg   73 (180)
T 1k1e_A            7 NIKFVITDVDGVLTDGQLH----------YDA---NGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLG   73 (180)
T ss_dssp             GCCEEEEECTTTTSCSEEE----------EET---TEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHT
T ss_pred             CCeEEEEeCCCCcCCCCee----------ecc---CcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcC
Confidence            3468999999999986421          000   11122335678889999998 579999999999999999999998


Q ss_pred             CCCCeeeeEEEecceeeeCCc-ccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          220 PNQTLIGQRVYRDSCVFADGE-YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       220 p~~~~f~~rl~Re~C~~~~g~-y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      ... +|..      + ..++. +.+-+..+|.++++++.|.|++.-...-...|+.+-
T Consensus        74 l~~-~~~~------~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~  123 (180)
T 1k1e_A           74 IKL-FFLG------K-LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFA  123 (180)
T ss_dssp             CCE-EEES------C-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             Cce-eecC------C-CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE
Confidence            764 4422      1 11222 334456679999999999999976654445555544

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=98.02  E-value=1.6e-06  Score=72.54  Aligned_cols=92  Identities=9%  Similarity=-0.025  Sum_probs=70.1

Q ss_pred             eCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEEE
Q 021254          183 QRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAIV  258 (315)
Q Consensus       183 lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vIII  258 (315)
                      ..|++.++|+.+.+ .+.++|.|++. .++..+++.++... +|...+..+.+...+.   .+.+-++.+|.+  +++.|
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~i  158 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVI  158 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHh-heeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEE
Confidence            78999999999985 69999999876 57889999987764 7888877766554432   245566677888  99999


Q ss_pred             ECCchhhccCCCCeeeeccc
Q 021254          259 DNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       259 DDsp~~~~~q~~NgI~I~~f  278 (315)
                      +|++.-.......|+.+-.+
T Consensus       159 GD~~~Di~~a~~aG~~~~~~  178 (190)
T 2fi1_A          159 GDRPIDIEAGQAAGLDTHLF  178 (190)
T ss_dssp             ESSHHHHHHHHHTTCEEEEC
T ss_pred             cCCHHHHHHHHHcCCeEEEE
Confidence            99998776555666655433

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.01  E-value=3.1e-06  Score=75.26  Aligned_cols=116  Identities=15%  Similarity=0.098  Sum_probs=80.5

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +-+.+||||||||+++...-          ...+... ..+..++++  +|++|. ..+.++|.|+.....+..+++.++
T Consensus        48 ~ik~viFDlDGTL~Ds~~~~----------~~~~~~~-~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lg  114 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIYM----------GNQGEEL-KAFNVRDGY--GIRCLITSDIDVAIITGRRAKLLEDRANTLG  114 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEEE----------ETTSCEE-EEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCEECCHHHH----------hhhhHHH-HHhccchHH--HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence            45689999999999985310          0011111 112344555  889998 579999999999999999999998


Q ss_pred             CCCCeeeeEEEecceeeeCC-cccccccccCCCCCcEEEEECCchhhccCCCCeeeecc
Q 021254          220 PNQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       220 p~~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      ... +|...       ..++ .+.+-++.+|.++++++.|-|+..-...-...|+.+-.
T Consensus       115 i~~-~f~~~-------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~  165 (211)
T 3ij5_A          115 ITH-LYQGQ-------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAV  165 (211)
T ss_dssp             CCE-EECSC-------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred             Cch-hhccc-------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEe
Confidence            764 55432       1122 24455567899999999999999877666666666543

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.00  E-value=3.8e-07  Score=79.98  Aligned_cols=91  Identities=12%  Similarity=0.077  Sum_probs=65.5

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEEC
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDN  260 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDD  260 (315)
                      +...||+.++|++|++...++|.|++...++..+++.++... +|.....   +...+..+++.+.. |.+++++++|+|
T Consensus        95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~-~f~~~~~---~~~~K~~~~~~~~~-~~~~~~~~~vgD  169 (231)
T 2p11_A           95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWD-EVEGRVL---IYIHKELMLDQVME-CYPARHYVMVDD  169 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHH-HTTTCEE---EESSGGGCHHHHHH-HSCCSEEEEECS
T ss_pred             CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHH-hcCeeEE---ecCChHHHHHHHHh-cCCCceEEEEcC
Confidence            467899999999999655999999999999999999987653 5544332   11223344444444 788999999999


Q ss_pred             Cch---hhccCCCCeeeec
Q 021254          261 TPQ---VFQLQVDNGIPIE  276 (315)
Q Consensus       261 sp~---~~~~q~~NgI~I~  276 (315)
                      ++.   ........|+..-
T Consensus       170 s~~d~~di~~A~~aG~~~i  188 (231)
T 2p11_A          170 KLRILAAMKKAWGARLTTV  188 (231)
T ss_dssp             CHHHHHHHHHHHGGGEEEE
T ss_pred             ccchhhhhHHHHHcCCeEE
Confidence            997   4444455666544

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.96  E-value=6.1e-07  Score=76.45  Aligned_cols=92  Identities=17%  Similarity=0.151  Sum_probs=70.5

Q ss_pred             EeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC-cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.++|+.+.+  .+.++|.|++....+..+++.++... +|...+....   .++ .+.+-++.+|.++++++.
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~~~~~~k---pk~~~~~~~~~~lgi~~~~~i~  179 (234)
T 3ddh_A          104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP-YFDHIEVMSD---KTEKEYLRLLSILQIAPSELLM  179 (234)
T ss_dssp             CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG-GCSEEEEESC---CSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh-hhheeeecCC---CCHHHHHHHHHHhCCCcceEEE
Confidence            4678999999999995  49999999999999999999998765 7777665321   122 356677788999999999


Q ss_pred             EECCc-hhhccCCCCeeeec
Q 021254          258 VDNTP-QVFQLQVDNGIPIE  276 (315)
Q Consensus       258 IDDsp-~~~~~q~~NgI~I~  276 (315)
                      |+|++ .-.......|+.+-
T Consensus       180 iGD~~~~Di~~a~~aG~~~v  199 (234)
T 3ddh_A          180 VGNSFKSDIQPVLSLGGYGV  199 (234)
T ss_dssp             EESCCCCCCHHHHHHTCEEE
T ss_pred             ECCCcHHHhHHHHHCCCeEE
Confidence            99997 55544444555444

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=97.96  E-value=4.1e-06  Score=71.58  Aligned_cols=113  Identities=17%  Similarity=0.028  Sum_probs=75.1

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +-+.++||+||||++.......          .+... ..+..++++  +|+++. +.+.++|.|++...++..+++.++
T Consensus        11 ~~k~vifD~DGTL~d~~~~~~~----------~~~~~-~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lg   77 (176)
T 3mmz_A           11 DIDAVVLDFDGTQTDDRVLIDS----------DGREF-VSVHRGDGL--GIAALRKSGLTMLILSTEQNPVVAARARKLK   77 (176)
T ss_dssp             GCSEEEECCTTTTSCSCCEECT----------TCCEE-EEEEHHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHHT
T ss_pred             cCCEEEEeCCCCcCcCCEeecC----------CccHh-HhcccccHH--HHHHHHHCCCeEEEEECcChHHHHHHHHHcC
Confidence            4568999999999993221000          00111 112234444  789998 579999999999999999999997


Q ss_pred             CCCCeeeeEEEecceeeeCC-cccccccccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          220 PNQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       220 p~~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      ..  +|...       ..++ .+.+-+..+|.++++++.|.|+..-...-...|+.+
T Consensus        78 i~--~~~~~-------~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v  125 (176)
T 3mmz_A           78 IP--VLHGI-------DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPV  125 (176)
T ss_dssp             CC--EEESC-------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             Ce--eEeCC-------CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeE
Confidence            65  44321       1122 244555677999999999999998664444455544

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=97.95  E-value=2.9e-07  Score=79.09  Aligned_cols=80  Identities=9%  Similarity=-0.084  Sum_probs=56.8

Q ss_pred             EeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEE
Q 021254          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIV  258 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIII  258 (315)
                      +...||+.++|++|.+  .+.++|.|++...++..+++.++.    |...+..+           -++.+|.+++++++|
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl----f~~i~~~~-----------~~~~~~~~~~~~~~v  136 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW----VEQHLGPQ-----------FVERIILTRDKTVVL  136 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH----HHHHHCHH-----------HHTTEEECSCGGGBC
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc----hhhhcCHH-----------HHHHcCCCcccEEEE
Confidence            4678999999999996  699999999999999999988754    43322211           355667788888887


Q ss_pred             ECCchh----hccCC-CCeeee
Q 021254          259 DNTPQV----FQLQV-DNGIPI  275 (315)
Q Consensus       259 DDsp~~----~~~q~-~NgI~I  275 (315)
                      .|++..    ..... ..|+..
T Consensus       137 gDs~~dD~~~i~~A~~~aG~~~  158 (193)
T 2i7d_A          137 GDLLIDDKDTVRGQEETPSWEH  158 (193)
T ss_dssp             CSEEEESSSCCCSSCSSCSSEE
T ss_pred             CCchhhCcHHHhhcccccccce
Confidence            665554    43344 445444

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=97.94  E-value=5.1e-07  Score=79.35  Aligned_cols=97  Identities=9%  Similarity=0.061  Sum_probs=73.0

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHH-hCCCCCeeeeEEEec--ceeeeCC---cccccccccCCCC-
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDI-LDPNQTLIGQRVYRD--SCVFADG---EYLKDLTILGRDL-  252 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~-LDp~~~~f~~rl~Re--~C~~~~g---~y~KDL~~Lgrdl-  252 (315)
                      +...|++.++|+.+++ .+.++|.|++....+...+.. ++... +|...+..+  .+...+.   .|.+-++.+|.++ 
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~-~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~  189 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFS-LFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA  189 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHT-TSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCC
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHh-heeeEEecchhhccCCCCChHHHHHHHHHcCCCCC
Confidence            5678999999999995 599999999998877766533 33333 677777776  5554443   2667788899988 


Q ss_pred             -CcEEEEECCchhhccCCCCeeeeccc
Q 021254          253 -ARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       253 -~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                       +++++|+|++.-.......|+.+-..
T Consensus       190 ~~~~i~iGD~~~Di~~a~~aG~~~i~v  216 (250)
T 3l5k_A          190 MEKCLVFEDAPNGVEAALAAGMQVVMV  216 (250)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred             cceEEEEeCCHHHHHHHHHcCCEEEEE
Confidence             99999999998776666777655444

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.89  E-value=2.2e-05  Score=66.33  Aligned_cols=80  Identities=14%  Similarity=0.113  Sum_probs=49.0

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCc---hh--hHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQ---SI--YAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARI  255 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~---~~--YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~v  255 (315)
                      +...||+.++|++|++.+.++|.|++.   +.  .+...+...-+...++..++..+.            ..+    +.+
T Consensus        68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~------------~~l----~~~  131 (180)
T 3bwv_A           68 LDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK------------NII----LAD  131 (180)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG------------GGB----CCS
T ss_pred             CCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc------------Cee----ccc
Confidence            567899999999999779999999983   22  224445553222223443433332            122    668


Q ss_pred             EEEECCchhhccCCCCeeeec
Q 021254          256 AIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I~  276 (315)
                      ++|||++......-..+|.+.
T Consensus       132 l~ieDs~~~i~~aaG~~i~~~  152 (180)
T 3bwv_A          132 YLIDDNPKQLEIFEGKSIMFT  152 (180)
T ss_dssp             EEEESCHHHHHHCSSEEEEEC
T ss_pred             EEecCCcchHHHhCCCeEEeC
Confidence            999999996533222444443

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=97.88  E-value=7e-06  Score=71.22  Aligned_cols=114  Identities=15%  Similarity=0.155  Sum_probs=75.8

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +-+.++||+||||+...........         ...  .+..++++  -|++|. ..+.++|.|+.....+..+++.++
T Consensus        18 ~ik~vifD~DGtL~~~~~~~~~~~~---------~~~--~~~~~d~~--~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lg   84 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLHIDNHGN---------ELK--SFHVQDGM--GLKLLMAAGIQVAIITTAQNAVVDHRMEQLG   84 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCEECTTCC---------EEC--CBCHHHHH--HHHHHHHTTCEEEEECSCCSHHHHHHHHHHT
T ss_pred             cCCEEEEeCCCCCCCCceeecCCch---------hhh--hccccChH--HHHHHHHCCCeEEEEeCcChHHHHHHHHHcC
Confidence            4568999999999985321000000         000  01123333  388888 569999999999999999999997


Q ss_pred             CCCCeeeeEEEecceeeeCC-cccccccccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          220 PNQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       220 p~~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      ... +|...       ..++ .+.+-++.+|.+++++++|.|+..-...-...|+.+
T Consensus        85 l~~-~~~~~-------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~  133 (191)
T 3n1u_A           85 ITH-YYKGQ-------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGV  133 (191)
T ss_dssp             CCE-EECSC-------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             Ccc-ceeCC-------CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEE
Confidence            764 44322       1122 245566678999999999999998665555666665

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=97.86  E-value=1.2e-06  Score=75.51  Aligned_cols=81  Identities=14%  Similarity=0.055  Sum_probs=56.7

Q ss_pred             EeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEE-
Q 021254          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAI-  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vII-  257 (315)
                      +...||+.++|++|++  .+.++|.|++...++..+++.++...++|.               .+-+..+|.+++++++ 
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~---------------~~~~~~l~~~~~~~~~v  138 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG---------------PDFLEQIVLTRDKTVVS  138 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC---------------GGGGGGEEECSCSTTSC
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch---------------HHHHHHhccCCccEEEE
Confidence            5678999999999995  699999999999998888887754432453               3445566777777777 


Q ss_pred             ----EECCchhhccCC-CCeeeecc
Q 021254          258 ----VDNTPQVFQLQV-DNGIPIES  277 (315)
Q Consensus       258 ----IDDsp~~~~~q~-~NgI~I~~  277 (315)
                          +||.|. ..... ..|+..--
T Consensus       139 gDs~~dD~~~-~~~a~~~aG~~~i~  162 (197)
T 1q92_A          139 ADLLIDDRPD-ITGAEPTPSWEHVL  162 (197)
T ss_dssp             CSEEEESCSC-CCCSCSSCSSEEEE
T ss_pred             CcccccCCch-hhhcccCCCceEEE
Confidence                454444 33344 55555443

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=97.86  E-value=3.7e-06  Score=73.82  Aligned_cols=116  Identities=9%  Similarity=0.013  Sum_probs=75.9

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      ++.+.++||+||||+.+........             .......+.-..-|+.|. ..+.++|.|+.....+..+++.+
T Consensus        23 ~~ik~vifD~DGtL~d~~~~~~~~~-------------~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~l   89 (195)
T 3n07_A           23 KQIKLLICDVDGVFSDGLIYMGNQG-------------EELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKAL   89 (195)
T ss_dssp             HTCCEEEECSTTTTSCSCCEECTTS-------------CEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHT
T ss_pred             hCCCEEEEcCCCCcCCCcEEEccCc-------------hhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHc
Confidence            3456899999999999632100000             000001111222388888 56999999999999999999999


Q ss_pred             CCCCCeeeeEEEecceeeeCC-cccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          219 DPNQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       219 Dp~~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      +... +|...       ..++ .+.+-+..+|.++++++.|.|+..-...-...|+.+-
T Consensus        90 gi~~-~~~~~-------k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va  140 (195)
T 3n07_A           90 GISL-IYQGQ-------DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVC  140 (195)
T ss_dssp             TCCE-EECSC-------SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred             CCcE-EeeCC-------CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEE
Confidence            7763 44321       1122 2344556779999999999999987765556666654

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=97.85  E-value=3.6e-05  Score=68.21  Aligned_cols=85  Identities=13%  Similarity=0.127  Sum_probs=61.3

Q ss_pred             eeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEEC
Q 021254          182 RQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDN  260 (315)
Q Consensus       182 ~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDD  260 (315)
                      ..+||+.++|+.+.+ .+.++|.|+....++..+++.++... +|...+..     .++...|.+....    +++.|-|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~~~~~-----~k~~~~k~~~~~~----~~~~vGD  213 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-YFAEVLPH-----EKAEKVKEVQQKY----VTAMVGD  213 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EECSCCGG-----GHHHHHHHHHTTS----CEEEEEC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-HhHhcCHH-----HHHHHHHHHHhcC----CEEEEeC
Confidence            689999999999985 69999999999999999999998764 55433322     1333444443222    7899999


Q ss_pred             CchhhccCCCCeeeec
Q 021254          261 TPQVFQLQVDNGIPIE  276 (315)
Q Consensus       261 sp~~~~~q~~NgI~I~  276 (315)
                      +..-...-...|+.|.
T Consensus       214 ~~nDi~~~~~Ag~~va  229 (280)
T 3skx_A          214 GVNDAPALAQADVGIA  229 (280)
T ss_dssp             TTTTHHHHHHSSEEEE
T ss_pred             CchhHHHHHhCCceEE
Confidence            9876655455555543

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=97.83  E-value=1.6e-06  Score=83.72  Aligned_cols=95  Identities=12%  Similarity=0.104  Sum_probs=72.3

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeee----------CC---ccccccc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA----------DG---EYLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~----------~g---~y~KDL~  246 (315)
                      +..+||+.++|++|++ .+.++|.|++...++..+++.++... +|...+...+....          ++   .+.+-+.
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~  333 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY-VAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ  333 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc-eeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence            5789999999999995 69999999999999999999998864 66655432222211          11   2445566


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      .+|.++++++.|.|++.-...-...|+.+-
T Consensus       334 ~~gi~~~~~i~vGD~~~Di~~a~~aG~~va  363 (415)
T 3p96_A          334 RAGVPMAQTVAVGDGANDIDMLAAAGLGIA  363 (415)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HcCcChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            779999999999999987766556676664

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=97.82  E-value=1.5e-05  Score=68.62  Aligned_cols=116  Identities=15%  Similarity=0.066  Sum_probs=77.1

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      .+.+.++||+||||++....-..          .+.... .+..+++  .+|+++.+ .+.++|.|+.....+..+++.+
T Consensus        24 ~~ik~vifD~DGTL~~~~~~~~~----------~~~~~~-~~~~~d~--~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~l   90 (188)
T 2r8e_A           24 ENIRLLILDVDGVLSDGLIYMGN----------NGEELK-AFNVRDG--YGIRCALTSDIEVAIITGRKAKLVEDRCATL   90 (188)
T ss_dssp             HTCSEEEECCCCCCBCSEEEEET----------TSCEEE-EEEHHHH--HHHHHHHTTTCEEEEECSSCCHHHHHHHHHH
T ss_pred             hcCCEEEEeCCCCcCCCCEEecC----------CCcEEE-EeecccH--HHHHHHHHCCCeEEEEeCCChHHHHHHHHHc
Confidence            45678999999999985421000          011000 1112222  48899884 6999999999999999999999


Q ss_pred             CCCCCeeeeEEEecceeeeCC-cccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          219 DPNQTLIGQRVYRDSCVFADG-EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       219 Dp~~~~f~~rl~Re~C~~~~g-~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      +... +|..       ...++ .+.+-++.+|.+++++++|.|+..-.......|+.+.
T Consensus        91 gl~~-~~~~-------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~  141 (188)
T 2r8e_A           91 GITH-LYQG-------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVA  141 (188)
T ss_dssp             TCCE-EECS-------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred             CCce-eecC-------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEE
Confidence            7653 4432       11222 2444556679999999999999987665566677664

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=97.77  E-value=4e-06  Score=80.28  Aligned_cols=95  Identities=14%  Similarity=0.020  Sum_probs=73.6

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCC------chhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCC
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAG------QSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGR  250 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas------~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgr  250 (315)
                      +...|++.++|+.|++ .|.++|.|++      ........+..|.   .+|+.++..+++...+..   |.+-++.+|.
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~---~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~  175 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK---MHFDFLIESCQVGMVKPEPQIYKFLLDTLKA  175 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH---TTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhh---hheeEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence            5678999999999995 5999999998      5555555444443   268888888877766653   8888999999


Q ss_pred             CCCcEEEEECCchhhccCCCCeeeeccc
Q 021254          251 DLARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       251 dl~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +++++++|+|+..-.......|+...-+
T Consensus       176 ~p~~~~~v~D~~~di~~a~~aG~~~~~~  203 (555)
T 3i28_A          176 SPSEVVFLDDIGANLKPARDLGMVTILV  203 (555)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred             ChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence            9999999999998775555666665444

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=97.58  E-value=4e-05  Score=68.83  Aligned_cols=92  Identities=11%  Similarity=0.113  Sum_probs=76.0

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +...||+.++|+++++.+.++|.|++....+..+++.++... +|+.+++.+++...+.   .|.+-++.+|.+++++++
T Consensus       120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~  198 (260)
T 2gfh_A          120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVM  198 (260)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHh-hhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEE
Confidence            456799999999999889999999999999999999998875 8998888877665554   367778889999999999


Q ss_pred             EECC-chhhccCCCCee
Q 021254          258 VDNT-PQVFQLQVDNGI  273 (315)
Q Consensus       258 IDDs-p~~~~~q~~NgI  273 (315)
                      |+|+ +.-.......|+
T Consensus       199 vGDs~~~Di~~A~~aG~  215 (260)
T 2gfh_A          199 VGDTLETDIQGGLNAGL  215 (260)
T ss_dssp             EESCTTTHHHHHHHTTC
T ss_pred             ECCCchhhHHHHHHCCC
Confidence            9996 665544445555

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.57  E-value=2.6e-05  Score=67.17  Aligned_cols=94  Identities=15%  Similarity=0.074  Sum_probs=77.3

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +...||+.++|+.|++.|.++|.|++....+..+++.++... +|...+..+  ...++   .|.+-++.+|.+++++++
T Consensus        83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~-~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~  159 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAII  159 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchh-heeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEE
Confidence            567899999999998899999999999999999999998765 888887766  22232   377788899999999999


Q ss_pred             EECCchhhccCCCCeeeecc
Q 021254          258 VDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~  277 (315)
                      |+|++.-.......|+..-.
T Consensus       160 vgDs~~Di~~a~~aG~~~i~  179 (210)
T 2ah5_A          160 IGDTKFDMLGARETGIQKLA  179 (210)
T ss_dssp             EESSHHHHHHHHHHTCEEEE
T ss_pred             ECCCHHHHHHHHHCCCcEEE
Confidence            99999877666677775443

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=97.53  E-value=6.7e-06  Score=72.64  Aligned_cols=130  Identities=10%  Similarity=-0.024  Sum_probs=74.9

Q ss_pred             CCeEEEEeCCcceeceecCC--------CCCCCceeeee-ecC--eeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch
Q 021254          141 LPITLVLDLDETLVHSSFDN--------CKDADFSFPIH-SKM--EVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS  208 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~--------~~~~d~~~~i~-~~~--~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~  208 (315)
                      +.+.++|||||||+++....        .....+..... +..  .....+....|++.++|++|. +.+.++|.|++..
T Consensus        36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~  115 (211)
T 2b82_A           36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP  115 (211)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred             CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence            35789999999999975310        00000000000 000  000012235789999999998 5799999999988


Q ss_pred             hhHHHHHHHhCCCCCeeeeEEE-ec--ceeeeC---CcccccccccCCCCCcEEEEECCchhhccCCCCeeeecc
Q 021254          209 IYAGQLLDILDPNQTLIGQRVY-RD--SCVFAD---GEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       209 ~YA~~vL~~LDp~~~~f~~rl~-Re--~C~~~~---g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      ..+..+++.|.   .+|..... .+  .+...+   ..|.+-++.+|.    +++|+|++.-.......|+..-.
T Consensus       116 ~~~~~~l~~l~---~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~  183 (211)
T 2b82_A          116 TKTETVSKTLA---DNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIR  183 (211)
T ss_dssp             CSSCCHHHHHH---HHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHH---HhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEE
Confidence            77777777642   12332211 00  011112   235566666676    99999999877666666766543

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.52  E-value=7e-05  Score=64.05  Aligned_cols=97  Identities=9%  Similarity=0.101  Sum_probs=78.8

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.++|+++.+.+.++|.|++...++..+++.++... +|+..++.+.+...++.   +.+-++.+|.+++++++
T Consensus       106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  184 (240)
T 3qnm_A          106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDR-YFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLM  184 (240)
T ss_dssp             CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHh-hceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            567899999999999889999999999999999999998765 78888888776655443   66778889999999999


Q ss_pred             EECCc-hhhccCCCCeeeeccc
Q 021254          258 VDNTP-QVFQLQVDNGIPIESW  278 (315)
Q Consensus       258 IDDsp-~~~~~q~~NgI~I~~f  278 (315)
                      |+|++ .-.......|+.+-..
T Consensus       185 iGD~~~~Di~~a~~aG~~~~~~  206 (240)
T 3qnm_A          185 IGDSWEADITGAHGVGMHQAFY  206 (240)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEE
T ss_pred             ECCCchHhHHHHHHcCCeEEEE
Confidence            99997 6555555556655444

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=97.44  E-value=0.00027  Score=60.99  Aligned_cols=94  Identities=11%  Similarity=0.000  Sum_probs=69.5

Q ss_pred             eEeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcE
Q 021254          180 FVRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI  255 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~v  255 (315)
                      .+...||+.++|+++++ .+.++|.|++.. ++..+++.++... +|+..+..+.+...+.   .|.+-++.+|.++   
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---  167 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK-YFDALALSYEIKAVKPNPKIFGFALAKVGYPA---  167 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG-GCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh-HeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence            36789999999999996 699999999976 6899999998765 7988888777665443   3667777888877   


Q ss_pred             EEEECCch-hhccCCCCeeeeccc
Q 021254          256 AIVDNTPQ-VFQLQVDNGIPIESW  278 (315)
Q Consensus       256 IIIDDsp~-~~~~q~~NgI~I~~f  278 (315)
                      ++|+|++. -.......|+..--+
T Consensus       168 ~~vgD~~~~Di~~a~~aG~~~i~v  191 (220)
T 2zg6_A          168 VHVGDIYELDYIGAKRSYVDPILL  191 (220)
T ss_dssp             EEEESSCCCCCCCSSSCSEEEEEB
T ss_pred             EEEcCCchHhHHHHHHCCCeEEEE
Confidence            99999998 777777888776544

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=97.43  E-value=5.2e-05  Score=64.37  Aligned_cols=96  Identities=9%  Similarity=0.009  Sum_probs=77.2

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeC--C-cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--G-EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~--g-~y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.++|+.+.+.+.++|.|++...++..+++.++... +|...+..+.+...+  + .+.+-++.+|.+++++++
T Consensus        82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~  160 (209)
T 2hdo_A           82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMM-RMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  160 (209)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGG-GEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHh-hccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEE
Confidence            568899999999998559999999999999999999987654 788888877766555  2 255667788999999999


Q ss_pred             EECCchhhccCCCCeeeecc
Q 021254          258 VDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~  277 (315)
                      |+|++.-.......|+.+-.
T Consensus       161 vGD~~~Di~~a~~aG~~~~~  180 (209)
T 2hdo_A          161 IGDSVSDEQTAQAANVDFGL  180 (209)
T ss_dssp             EESSHHHHHHHHHHTCEEEE
T ss_pred             ECCChhhHHHHHHcCCeEEE
Confidence            99998766555555665543

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=97.40  E-value=8.1e-05  Score=64.85  Aligned_cols=94  Identities=13%  Similarity=0.112  Sum_probs=74.7

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+++ .+.++|.|++...++..+++.++... +|...+..+.+...+.   .|.+-++.+|.++++++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i  171 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD-FFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL  171 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG-GCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh-hccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            4578999999999995 59999999999999999999998765 7888888777655443   25666778899999999


Q ss_pred             EEECCc-hhhccCCCCeeee
Q 021254          257 IVDNTP-QVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp-~~~~~q~~NgI~I  275 (315)
                      +|+|++ .-.......|+.+
T Consensus       172 ~iGD~~~~Di~~a~~aG~~~  191 (241)
T 2hoq_A          172 MVGDRLYSDIYGAKRVGMKT  191 (241)
T ss_dssp             EEESCTTTTHHHHHHTTCEE
T ss_pred             EECCCchHhHHHHHHCCCEE
Confidence            999998 5454444455543

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=97.40  E-value=0.00013  Score=65.00  Aligned_cols=97  Identities=8%  Similarity=-0.044  Sum_probs=77.4

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.+.+ .+.++|.|++.. .+..+++.++... +|...+..+.+...+.   .|.+-+..+|.++++++
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~  182 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLRE-HFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA  182 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGG-GCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHH-hhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence            5688999999999985 599999999776 4789999998765 7888888777665554   36677888999999999


Q ss_pred             EEECCc-hhhccCCCCeeeecccc
Q 021254          257 IVDNTP-QVFQLQVDNGIPIESWF  279 (315)
Q Consensus       257 IIDDsp-~~~~~q~~NgI~I~~f~  279 (315)
                      +|+|++ .-.......|+.+-...
T Consensus       183 ~vGD~~~~Di~~a~~aG~~~i~~~  206 (263)
T 3k1z_A          183 HVGDNYLCDYQGPRAVGMHSFLVV  206 (263)
T ss_dssp             EEESCHHHHTHHHHTTTCEEEEEC
T ss_pred             EECCCcHHHHHHHHHCCCEEEEEc
Confidence            999997 65655556677665554

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=97.38  E-value=8.7e-05  Score=67.06  Aligned_cols=93  Identities=10%  Similarity=0.031  Sum_probs=76.0

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC---CCCCeeeeEEEecceeeeCC---cccccccccCCCCC
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD---PNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLA  253 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD---p~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~  253 (315)
                      +...||+.++|+.|+ +.+.++|.|++....+..+++.++   .. .+|+..+.. ++. .+.   .|.+-++.+|.+++
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~-~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~  205 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT-KIG-HKVESESYRKIADSIGCSTN  205 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGG
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChH-hhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcc
Confidence            567899999999997 679999999999999999999764   44 379888777 655 554   37788889999999


Q ss_pred             cEEEEECCchhhccCCCCeeeec
Q 021254          254 RIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      ++|+|+|++.-.......|+...
T Consensus       206 ~~l~VgDs~~di~aA~~aG~~~i  228 (261)
T 1yns_A          206 NILFLTDVTREASAAEEADVHVA  228 (261)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEE
T ss_pred             cEEEEcCCHHHHHHHHHCCCEEE
Confidence            99999999887765666676543

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=97.38  E-value=0.00011  Score=64.34  Aligned_cols=93  Identities=9%  Similarity=0.048  Sum_probs=76.7

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.|+ +.+.++|.|++....+..+++.++..  +|...+..+.+...+.   .|.+-++.+|.++++++
T Consensus       109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~  186 (240)
T 2hi0_A          109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCV  186 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            567899999999998 56999999999999999999999865  6888888777655443   26677888999999999


Q ss_pred             EEECCchhhccCCCCeeee
Q 021254          257 IVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I  275 (315)
                      +|.|++.-.......|+..
T Consensus       187 ~vGDs~~Di~~a~~aG~~~  205 (240)
T 2hi0_A          187 YIGDSEIDIQTARNSEMDE  205 (240)
T ss_dssp             EEESSHHHHHHHHHTTCEE
T ss_pred             EEcCCHHHHHHHHHCCCeE
Confidence            9999998776666667754

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=97.36  E-value=0.00016  Score=66.23  Aligned_cols=119  Identities=15%  Similarity=0.041  Sum_probs=66.7

Q ss_pred             CCCeEEEEeCCcceeceecCC----CCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc---hhhH
Q 021254          140 GLPITLVLDLDETLVHSSFDN----CKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ---SIYA  211 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~----~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~---~~YA  211 (315)
                      .+++.+||||||||+.+..-.    .....|  ...+..-....-....||+.++|+.|. +.+.++|.|+..   ...+
T Consensus        57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~  134 (258)
T 2i33_A           57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGY--PYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDAT  134 (258)
T ss_dssp             SSEEEEEECSBTTTEECHHHHHHHHHHSCCT--TTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHH
T ss_pred             CCCCEEEEeCcccCcCCHHHHHHHHhcccch--HHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHH
Confidence            456789999999999984100    000000  000000000001346799999999998 579999999988   4455


Q ss_pred             HHHHHHhCCCC-CeeeeEEEecceeeeCCccccccc----ccCCCCCcEEEEECCchhhccC
Q 021254          212 GQLLDILDPNQ-TLIGQRVYRDSCVFADGEYLKDLT----ILGRDLARIAIVDNTPQVFQLQ  268 (315)
Q Consensus       212 ~~vL~~LDp~~-~~f~~rl~Re~C~~~~g~y~KDL~----~Lgrdl~~vIIIDDsp~~~~~q  268 (315)
                      ...|+.++... .++...+..+. .     +.++..    ..|.  ..+++|.|+..-+...
T Consensus       135 ~~~L~~~Gl~~v~~~~vi~~~~~-~-----~K~~~~~~~~~~~~--~~~l~VGDs~~Di~aA  188 (258)
T 2i33_A          135 IKNLERVGAPQATKEHILLQDPK-E-----KGKEKRRELVSQTH--DIVLFFGDNLSDFTGF  188 (258)
T ss_dssp             HHHHHHHTCSSCSTTTEEEECTT-C-----CSSHHHHHHHHHHE--EEEEEEESSGGGSTTC
T ss_pred             HHHHHHcCCCcCCCceEEECCCC-C-----CCcHHHHHHHHhCC--CceEEeCCCHHHhccc
Confidence            66677776551 13333332221 1     112221    1232  3488999998766443

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=97.36  E-value=0.00014  Score=62.25  Aligned_cols=93  Identities=11%  Similarity=0.009  Sum_probs=75.5

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccC-CCCCcEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILG-RDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lg-rdl~~vI  256 (315)
                      +...|++.++|+.+.+.+.++|.|++...++..+++.++... +|+..++.+.+...++.   +.+-++.+| .++++++
T Consensus       102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i  180 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFP-FFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTL  180 (238)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGG-GCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHh-hhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeE
Confidence            467899999999999669999999999999999999998765 78888887776555433   667778899 9999999


Q ss_pred             EEECCc-hhhccCCCCeee
Q 021254          257 IVDNTP-QVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp-~~~~~q~~NgI~  274 (315)
                      +|+|++ .-.......|+.
T Consensus       181 ~vGD~~~~Di~~a~~aG~~  199 (238)
T 3ed5_A          181 IIGDSLTADIKGGQLAGLD  199 (238)
T ss_dssp             EEESCTTTTHHHHHHTTCE
T ss_pred             EECCCcHHHHHHHHHCCCE
Confidence            999998 555444455554

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=97.31  E-value=0.00012  Score=63.44  Aligned_cols=93  Identities=24%  Similarity=0.268  Sum_probs=74.6

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|+.+.+ .+.++|.|++...++..+++.++... +|...+..+.+...++   .|.+-++.+|.++++++
T Consensus        82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  160 (222)
T 2nyv_A           82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSG-YFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKAL  160 (222)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHH-HheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEE
Confidence            5688999999999985 69999999999999999999998764 7888887776544432   25566778899999999


Q ss_pred             EEECCchhhccCCCCeee
Q 021254          257 IVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~  274 (315)
                      +|+|++.-.......|+.
T Consensus       161 ~vGD~~~Di~~a~~aG~~  178 (222)
T 2nyv_A          161 IVGDTDADIEAGKRAGTK  178 (222)
T ss_dssp             EEESSHHHHHHHHHHTCE
T ss_pred             EECCCHHHHHHHHHCCCe
Confidence            999998766555555655

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.30  E-value=0.00074  Score=56.87  Aligned_cols=62  Identities=11%  Similarity=0.287  Sum_probs=47.2

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+.+......                   ..-|++.+.|+.+. +.+.++|+|+-.......+++.+..
T Consensus         3 ~k~i~~DlDGTL~~~~~~~i~-------------------~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~   63 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRYPRIG-------------------EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRA   63 (142)
T ss_dssp             CCEEEECCBTTTBCSCTTSCC-------------------CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred             CeEEEEECcCCCCCCCCcccc-------------------ccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHH
Confidence            467999999999995321100                   13579999999998 6799999999987777777777766


Q ss_pred             CC
Q 021254          221 NQ  222 (315)
Q Consensus       221 ~~  222 (315)
                      .+
T Consensus        64 ~g   65 (142)
T 2obb_A           64 RG   65 (142)
T ss_dssp             TT
T ss_pred             cC
Confidence            65

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=97.24  E-value=0.00017  Score=63.54  Aligned_cols=94  Identities=14%  Similarity=0.116  Sum_probs=74.6

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      +..+||+.++|+.+.+ .+.++|.|++...++..+++.++... +|...+..+.+...+..   |.+-++.+|.++++++
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  191 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQIL  191 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchh-eEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEE
Confidence            4678999999999984 69999999999999999999997764 78887777766544432   5556678899999999


Q ss_pred             EEECCchhhccCCCCeeee
Q 021254          257 IVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I  275 (315)
                      +|+|++.-.......|+.+
T Consensus       192 ~vGD~~~Di~~a~~aG~~~  210 (243)
T 2hsz_A          192 FVGDSQNDIFAAHSAGCAV  210 (243)
T ss_dssp             EEESSHHHHHHHHHHTCEE
T ss_pred             EEcCCHHHHHHHHHCCCeE
Confidence            9999987665444555553

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=97.24  E-value=0.00012  Score=61.55  Aligned_cols=98  Identities=10%  Similarity=0.056  Sum_probs=77.8

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      ....|++.++|+.+.+...++|.|++...++..+++.++... +|...+..+.+...+.   .|.+-++.+|.+++++++
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  163 (200)
T 3cnh_A           85 SQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGE-FLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVM  163 (200)
T ss_dssp             CCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGG-TCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            347899999999998544999999999999999999997664 7888887766554444   355667788999999999


Q ss_pred             EECCchhhccCCCCeeeecccc
Q 021254          258 VDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      |+|++.-.......|+.+-.+.
T Consensus       164 vgD~~~Di~~a~~aG~~~~~~~  185 (200)
T 3cnh_A          164 VDDRLQNVQAARAVGMHAVQCV  185 (200)
T ss_dssp             EESCHHHHHHHHHTTCEEEECS
T ss_pred             eCCCHHHHHHHHHCCCEEEEEC
Confidence            9999987766666777665443

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=97.21  E-value=0.00024  Score=61.78  Aligned_cols=96  Identities=16%  Similarity=0.133  Sum_probs=76.8

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCee--eeEEEecceeeeCC---cccccccccCCCCCc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLI--GQRVYRDSCVFADG---EYLKDLTILGRDLAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f--~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~  254 (315)
                      ....|++.++|+++.+ .+.++|.|++...++..+++. +... +|  +..+..+.+...+.   .|.+-++.+|.++++
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  185 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPG-MFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADE  185 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTT-TCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHH-hcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHH
Confidence            4678999999999985 599999999999999998888 6654 78  77888777655443   267778889999999


Q ss_pred             EEEEECCchhhccCCCCeeeeccc
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +|+|+|++.-.......|+.+-.+
T Consensus       186 ~i~vGD~~~Di~~a~~aG~~~i~v  209 (243)
T 3qxg_A          186 AVVIENAPLGVEAGHKAGIFTIAV  209 (243)
T ss_dssp             EEEEECSHHHHHHHHHTTCEEEEE
T ss_pred             eEEEeCCHHHHHHHHHCCCEEEEE
Confidence            999999998776666677654433

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=97.18  E-value=0.00028  Score=60.82  Aligned_cols=94  Identities=17%  Similarity=0.124  Sum_probs=72.6

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCee--eeEEEecceeeeCCc---ccccccccCCCCCc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLI--GQRVYRDSCVFADGE---YLKDLTILGRDLAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f--~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~  254 (315)
                      ....|++.++|+.+.+ .+.++|.|++...++..+++. +... +|  +..+..+.+...++.   |.+-++.+|.++++
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  184 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPG-IFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNE  184 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTT-TCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHH-hcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhh
Confidence            4678999999999985 599999999999999999988 6554 78  778877776544432   66777888999999


Q ss_pred             EEEEECCchhhccCCCCeeeec
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      +|+|+|++.-.......|+.+-
T Consensus       185 ~i~vGD~~~Di~~a~~aG~~~i  206 (247)
T 3dv9_A          185 ALVIENAPLGVQAGVAAGIFTI  206 (247)
T ss_dssp             EEEEECSHHHHHHHHHTTSEEE
T ss_pred             eEEEeCCHHHHHHHHHCCCeEE
Confidence            9999999987766666675543

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.02  E-value=0.0011  Score=53.78  Aligned_cols=63  Identities=27%  Similarity=0.281  Sum_probs=44.7

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhh-----------
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIY-----------  210 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~Y-----------  210 (315)
                      +.+++||||||+++....     +      .      -+...|+..+.|+++. +.+.++|.|......           
T Consensus         2 k~i~~DlDGTL~~~~~~~-----~------~------~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~   64 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTSD-----Y------R------NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIH   64 (126)
T ss_dssp             CEEEECSTTTTBCCCCSC-----G------G------GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHH
T ss_pred             CEEEEecCCCCCCCCCCc-----c------c------cCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhccccccccCHH
Confidence            468999999999864210     0      0      0124688999999997 679999999876543           


Q ss_pred             -HHHHHHHhCCCC
Q 021254          211 -AGQLLDILDPNQ  222 (315)
Q Consensus       211 -A~~vL~~LDp~~  222 (315)
                       +..+++.+...+
T Consensus        65 ~~~~i~~~~~~~~   77 (126)
T 1xpj_A           65 TLPIITEWLDKHQ   77 (126)
T ss_dssp             THHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcC
Confidence             567777765544

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=96.98  E-value=0.001  Score=56.70  Aligned_cols=97  Identities=10%  Similarity=0.070  Sum_probs=74.1

Q ss_pred             EeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeC-C---cccccccccC--CCC
Q 021254          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD-G---EYLKDLTILG--RDL  252 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~-g---~y~KDL~~Lg--rdl  252 (315)
                      +...|++.++|+.+.+  .+.++|.|++...++..+++.++... +|...++.+...... .   .+.+-++.+|  .++
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~  170 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPFGAFADDALDRNELPHIALERARRMTGANYSP  170 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh-hcCcceecCCCcCccchHHHHHHHHHHHhCCCCCc
Confidence            5678999999999996  49999999999999999999998775 787666655432111 0   1344466778  899


Q ss_pred             CcEEEEECCchhhccCCCCeeeeccc
Q 021254          253 ARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       253 ~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      +++++|.|++.-.......|+.+-.+
T Consensus       171 ~~~i~iGD~~~Di~~a~~aG~~~i~v  196 (234)
T 2hcf_A          171 SQIVIIGDTEHDIRCARELDARSIAV  196 (234)
T ss_dssp             GGEEEEESSHHHHHHHHTTTCEEEEE
T ss_pred             ccEEEECCCHHHHHHHHHCCCcEEEE
Confidence            99999999998776666777654433

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=96.96  E-value=0.00039  Score=59.11  Aligned_cols=94  Identities=13%  Similarity=0.056  Sum_probs=72.9

Q ss_pred             eCchHHHHHHHhhc-ccEEEEEcCCc---hhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcE
Q 021254          183 QRPYLHMFLEAVAS-MFDVVIFTAGQ---SIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARI  255 (315)
Q Consensus       183 lRP~l~eFL~~l~~-~fEIvIfTas~---~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~v  255 (315)
                      ..|++.++|+.+.+ .+.++|.|++.   ..++..+++.++... +|+..++.+.....+..   |.+-++.+|.+++++
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  178 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME-FIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES  178 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-GCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH-HhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence            48999999999985 59999999999   999999999997765 78888876665444432   556677889999999


Q ss_pred             EEEECCc-hhhccCCCCeeeecc
Q 021254          256 AIVDNTP-QVFQLQVDNGIPIES  277 (315)
Q Consensus       256 IIIDDsp-~~~~~q~~NgI~I~~  277 (315)
                      +.|+|++ .-.......|+.+-.
T Consensus       179 ~~iGD~~~nDi~~a~~aG~~~~~  201 (235)
T 2om6_A          179 LHIGDTYAEDYQGARKVGMWAVW  201 (235)
T ss_dssp             EEEESCTTTTHHHHHHTTSEEEE
T ss_pred             EEECCChHHHHHHHHHCCCEEEE
Confidence            9999999 545444445555433

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=96.95  E-value=0.00046  Score=59.12  Aligned_cols=113  Identities=13%  Similarity=-0.012  Sum_probs=72.4

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHH-
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDI-  217 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~-  217 (315)
                      ++-+.+|+|+||||+.....-..          .+.... .+..|.+.  .|+.|. ..+.++|-|+.  ..+..+++. 
T Consensus         7 ~~ikliv~D~DGtL~d~~~~~~~----------~g~~~~-~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l   71 (168)
T 3ewi_A            7 KEIKLLVCNIDGCLTNGHIYVSG----------DQKEII-SYDVKDAI--GISLLKKSGIEVRLISER--ACSKQTLSAL   71 (168)
T ss_dssp             CCCCEEEEECCCCCSCSCCBCCS----------SCCCEE-EEEHHHHH--HHHHHHHTTCEEEEECSS--CCCHHHHHTT
T ss_pred             hcCcEEEEeCccceECCcEEEcC----------CCCEEE-EEecCcHH--HHHHHHHCCCEEEEEeCc--HHHHHHHHHh
Confidence            55678999999999987532111          111111 12345553  688888 57999999998  789999994 


Q ss_pred             -hCCCCCeeeeEEEecceeeeCCc-ccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          218 -LDPNQTLIGQRVYRDSCVFADGE-YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       218 -LDp~~~~f~~rl~Re~C~~~~g~-y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                       ++..  +|.      .+ ..++. +.+-+..+|.++++++.|-|+..-...-...|+.+-
T Consensus        72 ~lgi~--~~~------g~-~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a  123 (168)
T 3ewi_A           72 KLDCK--TEV------SV-SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV  123 (168)
T ss_dssp             CCCCC--EEC------SC-SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE
T ss_pred             CCCcE--EEE------CC-CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE
Confidence             4332  221      11 12222 334455679999999999999987655555555554

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=96.92  E-value=0.00033  Score=60.04  Aligned_cols=93  Identities=12%  Similarity=0.062  Sum_probs=70.0

Q ss_pred             eCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEEE
Q 021254          183 QRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAIV  258 (315)
Q Consensus       183 lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vIII  258 (315)
                      ..||+.++|+.+.+ .+.++|.|++..  +..+++.++... +|...+..+.+...+.   .|.+-++.+|.+++++|+|
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v  169 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID-DFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI  169 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT-TCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh-hcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence            68999999999995 599999999854  889999998765 7888877776554442   3667788899999999999


Q ss_pred             ECCchhhccCCCCeeeeccc
Q 021254          259 DNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       259 DDsp~~~~~q~~NgI~I~~f  278 (315)
                      .|++.-.......|+.+-..
T Consensus       170 GDs~~Di~~a~~aG~~~~~~  189 (233)
T 3nas_A          170 EDAEAGISAIKSAGMFAVGV  189 (233)
T ss_dssp             ECSHHHHHHHHHTTCEEEEC
T ss_pred             eCCHHHHHHHHHcCCEEEEE
Confidence            99988766666667665544

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=96.89  E-value=0.00072  Score=56.95  Aligned_cols=96  Identities=10%  Similarity=0.049  Sum_probs=75.5

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeC--Cc-ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD--GE-YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~--g~-y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|...++.+.....+  +. +.+-++.+|.++++++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i  171 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV  171 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh-hCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            4578999999999985 59999999999999999999987764 788888777655444  22 4555677899999999


Q ss_pred             EEECCchhhccCCCCeeeecc
Q 021254          257 IVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~  277 (315)
                      .|.|++.-.......|+.+-.
T Consensus       172 ~iGD~~nDi~~a~~aG~~~~~  192 (226)
T 1te2_A          172 ALEDSVNGMIASKAARMRSIV  192 (226)
T ss_dssp             EEESSHHHHHHHHHTTCEEEE
T ss_pred             EEeCCHHHHHHHHHcCCEEEE
Confidence            999999876555556665544

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=96.82  E-value=0.0004  Score=59.14  Aligned_cols=93  Identities=11%  Similarity=-0.029  Sum_probs=71.7

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---cccc---ccccCCCCCc
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKD---LTILGRDLAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KD---L~~Lgrdl~~  254 (315)
                      +...|++.++|+.+++.+.++|.|++....+..+++.+.   .+|+..+..+.....+..   |.+-   +..+|.++++
T Consensus        98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~  174 (240)
T 3smv_A           98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKD  174 (240)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGG
T ss_pred             CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---CccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchh
Confidence            457899999999999889999999999999999988864   478888887765544432   3334   7788999999


Q ss_pred             EEEEECCc-hhhccCCCCeeeec
Q 021254          255 IAIVDNTP-QVFQLQVDNGIPIE  276 (315)
Q Consensus       255 vIIIDDsp-~~~~~q~~NgI~I~  276 (315)
                      +|+|+|++ .-.......|+.+-
T Consensus       175 ~~~vGD~~~~Di~~a~~aG~~~~  197 (240)
T 3smv_A          175 ILHTAESLYHDHIPANDAGLVSA  197 (240)
T ss_dssp             EEEEESCTTTTHHHHHHHTCEEE
T ss_pred             EEEECCCchhhhHHHHHcCCeEE
Confidence            99999997 55544444455443

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=96.76  E-value=0.00095  Score=55.10  Aligned_cols=92  Identities=12%  Similarity=0.022  Sum_probs=71.1

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      ...+|++.++|+.+.+ .+.++|+|++...++. +++.++... +|...+..+.....+.   .+.+-++.+|.++++++
T Consensus        84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~  161 (207)
T 2go7_A           84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES-YFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY  161 (207)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG-GEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh-heeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEE
Confidence            5678999999999985 5999999999999999 999987764 7887777665444332   24455667899999999


Q ss_pred             EEECCchhhccCCCCeee
Q 021254          257 IVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~  274 (315)
                      .|+|++.-.......|+.
T Consensus       162 ~iGD~~nDi~~~~~aG~~  179 (207)
T 2go7_A          162 YIGDRTLDVEFAQNSGIQ  179 (207)
T ss_dssp             EEESSHHHHHHHHHHTCE
T ss_pred             EECCCHHHHHHHHHCCCe
Confidence            999998766554455554

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=96.76  E-value=0.00097  Score=56.09  Aligned_cols=96  Identities=8%  Similarity=0.010  Sum_probs=74.2

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+.+ .+.++|.|++...++..+++.++... +|...+..+.....++   .+.+-++.+|.++++++
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i  166 (225)
T 3d6j_A           88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD-WFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVL  166 (225)
T ss_dssp             CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT-CCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh-heeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeE
Confidence            4568999999999984 69999999999999999999987664 6777777665543332   24556677899999999


Q ss_pred             EEECCchhhccCCCCeeeecc
Q 021254          257 IVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~  277 (315)
                      .|+|++.-.......|+.+-.
T Consensus       167 ~iGD~~nDi~~~~~aG~~~~~  187 (225)
T 3d6j_A          167 YIGDSTVDAGTAAAAGVSFTG  187 (225)
T ss_dssp             EEESSHHHHHHHHHHTCEEEE
T ss_pred             EEcCCHHHHHHHHHCCCeEEE
Confidence            999999866555556665443

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=96.73  E-value=0.00034  Score=67.93  Aligned_cols=96  Identities=11%  Similarity=0.056  Sum_probs=74.6

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeee--eEEEeccee-----------eeCC---cccc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIG--QRVYRDSCV-----------FADG---EYLK  243 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~--~rl~Re~C~-----------~~~g---~y~K  243 (315)
                      +...||+.++|+.|++ .+.++|.|++...++..+++.++... +|.  .++..++..           ..+.   .|.+
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~-~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~  292 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP-YFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA  292 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG-GSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH-hcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence            3468999999999995 69999999999999999999998765 788  677755532           1222   3666


Q ss_pred             cccccC--------------CCCCcEEEEECCchhhccCCCCeeeecc
Q 021254          244 DLTILG--------------RDLARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       244 DL~~Lg--------------rdl~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      -+..+|              .+++++++|+|++.-.......|+..-.
T Consensus       293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~  340 (384)
T 1qyi_A          293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIG  340 (384)
T ss_dssp             HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEE
T ss_pred             HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEE
Confidence            677777              7899999999999876555566666543

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=96.72  E-value=0.00037  Score=60.00  Aligned_cols=95  Identities=11%  Similarity=0.051  Sum_probs=73.3

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.++|+.+.+.+.++|.|++....+..+++.++..   |...++.+.+...+.   .|.+-++.+|.+++++++
T Consensus       115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  191 (254)
T 3umg_A          115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVML  191 (254)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            45689999999999977999999999999999999999664   666555555444333   256677788999999999


Q ss_pred             EECCchhhccCCCCeeeeccc
Q 021254          258 VDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~~f  278 (315)
                      |+|++.-.......|+.+-..
T Consensus       192 iGD~~~Di~~a~~aG~~~~~~  212 (254)
T 3umg_A          192 AAAHNGDLEAAHATGLATAFI  212 (254)
T ss_dssp             EESCHHHHHHHHHTTCEEEEE
T ss_pred             EeCChHhHHHHHHCCCEEEEE
Confidence            999987665555556655443

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=96.65  E-value=0.0027  Score=57.76  Aligned_cols=104  Identities=9%  Similarity=0.011  Sum_probs=76.0

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      ....+.+|.|++++....                    .....+||+.++|+.|. ..+.++|.|++....+..+++.++
T Consensus       142 g~~~i~~~~d~~~~~~~~--------------------~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~g  201 (287)
T 3a1c_A          142 AKTAVIVARNGRVEGIIA--------------------VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN  201 (287)
T ss_dssp             TCEEEEEEETTEEEEEEE--------------------EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             CCeEEEEEECCEEEEEEE--------------------eccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhC
Confidence            445778888887655321                    12357999999999998 469999999999999999999997


Q ss_pred             CCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeee
Q 021254          220 PNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       220 p~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~  274 (315)
                      ... +|...+        .....+-++.++.. +++++|.|+..-.......|+.
T Consensus       202 l~~-~f~~i~--------~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~  246 (287)
T 3a1c_A          202 LDL-VIAEVL--------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLG  246 (287)
T ss_dssp             CSE-EECSCC--------TTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE
T ss_pred             Cce-eeeecC--------hHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee
Confidence            754 554322        11234556677888 9999999998766544455555

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=96.63  E-value=0.00053  Score=58.53  Aligned_cols=90  Identities=17%  Similarity=0.180  Sum_probs=68.1

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.++|+.+.+.+.++|.|++...     ++.++... +|+..+..+.+...+.   .|.+-++.+|.+++++++
T Consensus       104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (230)
T 3vay_A          104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLAD-YFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVH  177 (230)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGG-GCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHH-HeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEE
Confidence            45789999999999977999999998776     55555543 7888888776655443   366777888999999999


Q ss_pred             EECCc-hhhccCCCCeeeec
Q 021254          258 VDNTP-QVFQLQVDNGIPIE  276 (315)
Q Consensus       258 IDDsp-~~~~~q~~NgI~I~  276 (315)
                      |+|++ .-.......|+.+-
T Consensus       178 vGD~~~~Di~~a~~aG~~~~  197 (230)
T 3vay_A          178 VGDHPSDDIAGAQQAGMRAI  197 (230)
T ss_dssp             EESCTTTTHHHHHHTTCEEE
T ss_pred             EeCChHHHHHHHHHCCCEEE
Confidence            99998 55544445555443

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=96.61  E-value=0.00056  Score=62.41  Aligned_cols=121  Identities=12%  Similarity=0.040  Sum_probs=80.2

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhH---HHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYA---GQLLDI  217 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA---~~vL~~  217 (315)
                      ...+++|+|||+........  .+      +.   .-......||+.++|+.|+ +.+.++|.|+....++   ..+++.
T Consensus       159 ~~~i~iD~dgtl~~~~~~~~--~~------~~---~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~  227 (301)
T 1ltq_A          159 PKAVIFDVDGTLAKMNGRGP--YD------LE---KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRM  227 (301)
T ss_dssp             CEEEEEETBTTTBCCSSCCT--TC------GG---GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHH
T ss_pred             cceEEEeCCCCcccccCCCc--hh------hh---hccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHh
Confidence            45788999999877543211  11      11   1112456899999999998 5799999999998776   456666


Q ss_pred             --------hCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCc-EEEEECCchhhccCCCCeeeecc
Q 021254          218 --------LDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLAR-IAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       218 --------LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~-vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                              ++.   +|...+.++... .+.   .+.+-+..++.+... +++|+|++........+|+++-.
T Consensus       228 ~~~~~~~~~~~---~~~~~~~~~~~~-~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~  295 (301)
T 1ltq_A          228 TRKWVEDIAGV---PLVMQCQREQGD-TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQ  295 (301)
T ss_dssp             HHHHHHHTTCC---CCSEEEECCTTC-CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEE
T ss_pred             cccccccccCC---CchheeeccCCC-CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEE
Confidence                    544   366666665532 121   133445566666544 68899999988777777877543

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=96.53  E-value=0.0026  Score=58.71  Aligned_cols=121  Identities=15%  Similarity=0.062  Sum_probs=71.1

Q ss_pred             CCeEEEEeCCcceeceecCC----CCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch----hhH
Q 021254          141 LPITLVLDLDETLVHSSFDN----CKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS----IYA  211 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~----~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~----~YA  211 (315)
                      +|+.+|||+||||+..+.-.    .....|.. ..|..-.........||+.+||+.|. ..++|+|-|+...    ..+
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~-~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T  135 (260)
T 3pct_A           57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSP-KTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGT  135 (260)
T ss_dssp             -CEEEEECCBTTTEECHHHHHHHHHHTCCCCH-HHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHH
T ss_pred             CCCEEEEECCccCcCChhHHHhhcccCCCCCH-HHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHH
Confidence            34599999999999986310    00011110 00000001123567899999999998 6799999998865    477


Q ss_pred             HHHHHHhCCCCCeee-eEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhc
Q 021254          212 GQLLDILDPNQTLIG-QRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQ  266 (315)
Q Consensus       212 ~~vL~~LDp~~~~f~-~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~  266 (315)
                      ...|+.++... ++. +.+.|.... .+....+.|...|.  .-++.|.|+..-+.
T Consensus       136 ~~~L~~lGi~~-~~~~~Lilr~~~~-~K~~~r~~L~~~gy--~iv~~iGD~~~Dl~  187 (260)
T 3pct_A          136 VDDMKRLGFTG-VNDKTLLLKKDKS-NKSVRFKQVEDMGY--DIVLFVGDNLNDFG  187 (260)
T ss_dssp             HHHHHHHTCCC-CSTTTEEEESSCS-SSHHHHHHHHTTTC--EEEEEEESSGGGGC
T ss_pred             HHHHHHcCcCc-cccceeEecCCCC-ChHHHHHHHHhcCC--CEEEEECCChHHcC
Confidence            77788887654 232 345554321 12222333433343  44899999887664

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=96.52  E-value=0.004  Score=56.20  Aligned_cols=60  Identities=27%  Similarity=0.304  Sum_probs=47.7

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      .+.+.+++||||||+.+...                       .-|...+.|+++. +...++|.|.-...-+..+++.+
T Consensus        19 ~~~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l   75 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPDHF-----------------------LTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNL   75 (285)
T ss_dssp             --CCEEEEECCCCCSCTTSC-----------------------CCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHH
T ss_pred             CcceEEEEeCcCCCCCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhc
Confidence            55678999999999987421                       3567788888887 67999999999988889999988


Q ss_pred             CCCC
Q 021254          219 DPNQ  222 (315)
Q Consensus       219 Dp~~  222 (315)
                      +...
T Consensus        76 ~~~~   79 (285)
T 3pgv_A           76 GIRS   79 (285)
T ss_dssp             CSCC
T ss_pred             CCCc
Confidence            7764

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=96.49  E-value=0.0018  Score=56.62  Aligned_cols=94  Identities=7%  Similarity=0.061  Sum_probs=69.0

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceee--------eCC--c-cc------
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVF--------ADG--E-YL------  242 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~--------~~g--~-y~------  242 (315)
                      +..+||+.++|++|. +.+.++|.|++...++..+++.|  .+ + ..++..+....        .+.  . +.      
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l--~~-~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~  151 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI--VE-K-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC  151 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT--SC-G-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcC--CC-C-CeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence            678999999999998 56999999999999999999833  22 2 44444333221        111  1 22      


Q ss_pred             --ccccccCCCCCcEEEEECCchhhccCCCCeeeeccc
Q 021254          243 --KDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       243 --KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                        +-++.+|.+++++++|+|++.-.......|+.+..|
T Consensus       152 K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~  189 (236)
T 2fea_A          152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD  189 (236)
T ss_dssp             HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH
T ss_pred             HHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech
Confidence              566778999999999999998776666778877643

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=96.48  E-value=0.0048  Score=54.12  Aligned_cols=57  Identities=9%  Similarity=0.072  Sum_probs=44.5

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+++...                       ..|...+.|+++. +...+++.|......+..+++.++..
T Consensus         4 kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~   60 (231)
T 1wr8_A            4 KAISIDIDGTITYPNRM-----------------------IHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS   60 (231)
T ss_dssp             CEEEEESTTTTBCTTSC-----------------------BCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred             eEEEEECCCCCCCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence            57999999999997421                       3577788888886 57888888888888888888888654


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        61 ~   61 (231)
T 1wr8_A           61 G   61 (231)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=96.42  E-value=0.004  Score=55.03  Aligned_cols=57  Identities=12%  Similarity=0.007  Sum_probs=48.2

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+.+..                       ...|...+.|+++. +.+.++|.|......+..+++.++..
T Consensus         6 kli~~DlDGTLl~~~~-----------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~   62 (227)
T 1l6r_A            6 RLAAIDVDGNLTDRDR-----------------------LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN   62 (227)
T ss_dssp             CEEEEEHHHHSBCTTS-----------------------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             EEEEEECCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence            5799999999998631                       14788999999998 57999999999999999999998765


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        63 ~   63 (227)
T 1l6r_A           63 G   63 (227)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=96.41  E-value=0.00093  Score=58.39  Aligned_cols=93  Identities=15%  Similarity=0.084  Sum_probs=70.0

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEEC
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDN  260 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDD  260 (315)
                      +...|++.++|+.+.+.+.++|.|++...++..+++.++... +|...+....  .....+.+-++.+|.++++++.|.|
T Consensus       111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~i~~~~k--p~~~~~~~~~~~l~~~~~~~i~iGD  187 (251)
T 2pke_A          111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSD-LFPRIEVVSE--KDPQTYARVLSEFDLPAERFVMIGN  187 (251)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGG-TCCCEEEESC--CSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHH-hCceeeeeCC--CCHHHHHHHHHHhCcCchhEEEECC
Confidence            456899999999999779999999999999999999987764 6776655311  1112355667788999999999999


Q ss_pred             Cc-hhhccCCCCeeeec
Q 021254          261 TP-QVFQLQVDNGIPIE  276 (315)
Q Consensus       261 sp-~~~~~q~~NgI~I~  276 (315)
                      ++ .-.......|+.+-
T Consensus       188 ~~~~Di~~a~~aG~~~~  204 (251)
T 2pke_A          188 SLRSDVEPVLAIGGWGI  204 (251)
T ss_dssp             CCCCCCHHHHHTTCEEE
T ss_pred             CchhhHHHHHHCCCEEE
Confidence            99 65544444555543

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=96.39  E-value=0.0012  Score=55.63  Aligned_cols=95  Identities=11%  Similarity=0.081  Sum_probs=73.5

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      +...|++.++|+.+.+ .+.++|.|++  ..+..+++.++... +|...+..+.+...++.   +.+-++.+|.++++++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i  166 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI  166 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG-GCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHH-HcceEeccccCCCCCCChHHHHHHHHHcCCChhHeE
Confidence            3467999999999985 6999999998  67788899887654 78877776665554443   5566778899999999


Q ss_pred             EEECCchhhccCCCCeeeeccc
Q 021254          257 IVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      .|+|++.-.......|+.+-..
T Consensus       167 ~iGD~~nDi~~a~~aG~~~~~~  188 (221)
T 2wf7_A          167 GLEDSQAGIQAIKDSGALPIGV  188 (221)
T ss_dssp             EEESSHHHHHHHHHHTCEEEEE
T ss_pred             EEeCCHHHHHHHHHCCCEEEEE
Confidence            9999998766555666665544

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=96.28  E-value=0.00078  Score=60.84  Aligned_cols=93  Identities=8%  Similarity=-0.053  Sum_probs=55.7

Q ss_pred             eCchHHHHHHHhhc--ccEEEEEcCC---------------------chhhHHHHHHHhCCCCCeeeeE----------E
Q 021254          183 QRPYLHMFLEAVAS--MFDVVIFTAG---------------------QSIYAGQLLDILDPNQTLIGQR----------V  229 (315)
Q Consensus       183 lRP~l~eFL~~l~~--~fEIvIfTas---------------------~~~YA~~vL~~LDp~~~~f~~r----------l  229 (315)
                      .+|++.++|+.+.+  .+.+.+.|..                     ....+..+++..+... +|...          .
T Consensus       123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSV-NINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEE-EEEECCGGGTCCTTEE
T ss_pred             CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCE-EEEEccccccCCCCce
Confidence            46899999999985  4556777766                     3445555565554332 22211          1


Q ss_pred             Eecceeee--CCc-ccccccccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          230 YRDSCVFA--DGE-YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       230 ~Re~C~~~--~g~-y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      +-+.....  ++. +.+-+..+|.++++++.|-|+..-.......|+.+.
T Consensus       202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~  251 (289)
T 3gyg_A          202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYL  251 (289)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE
T ss_pred             EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEE
Confidence            11111111  111 334455679999999999999997766666666653

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=96.28  E-value=0.006  Score=54.34  Aligned_cols=56  Identities=21%  Similarity=0.116  Sum_probs=46.5

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.++|||||||+.+...                       .-|...+.|+++. +...+++.|.....-+..+++.++.
T Consensus         5 ~kli~fDlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   61 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKKE-----------------------ISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRM   61 (279)
T ss_dssp             CCEEEECCCCCCSCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTG
T ss_pred             ceEEEEeCCCCCCCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCC
Confidence            468999999999987431                       3577888888887 6799999999999889999988875

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.25  E-value=0.0073  Score=54.10  Aligned_cols=57  Identities=19%  Similarity=0.120  Sum_probs=40.4

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+++...                       .-|...+.|+++. +...+++.|......+..+++.++.
T Consensus         6 ~kli~fDlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~   62 (290)
T 3dnp_A            6 KQLLALNIDGALLRSNGK-----------------------IHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKL   62 (290)
T ss_dssp             CCEEEECCCCCCSCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTC
T ss_pred             ceEEEEcCCCCCCCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence            568999999999997431                       2455666666665 5677777777777777777777665


Q ss_pred             C
Q 021254          221 N  221 (315)
Q Consensus       221 ~  221 (315)
                      .
T Consensus        63 ~   63 (290)
T 3dnp_A           63 D   63 (290)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=96.23  E-value=0.0064  Score=54.14  Aligned_cols=57  Identities=19%  Similarity=0.170  Sum_probs=39.3

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+.+...                       .-|...+.|+++. +...+++.|.....-+..+++.++.
T Consensus         5 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   61 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKNE-----------------------LAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDI   61 (279)
T ss_dssp             CCEEEECC----------------------------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTC
T ss_pred             eEEEEEcCcCCCCCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence            467999999999998531                       4577788888887 6799999999999999999999876


Q ss_pred             C
Q 021254          221 N  221 (315)
Q Consensus       221 ~  221 (315)
                      .
T Consensus        62 ~   62 (279)
T 3mpo_A           62 D   62 (279)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=96.20  E-value=0.0024  Score=58.99  Aligned_cols=123  Identities=16%  Similarity=0.035  Sum_probs=73.2

Q ss_pred             CCCeEEEEeCCcceeceecC----CCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch----hh
Q 021254          140 GLPITLVLDLDETLVHSSFD----NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS----IY  210 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~----~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~----~Y  210 (315)
                      .+++.+|||+||||+....-    ......|.. ..+..-.........||+.+||+.|. ..++|+|-|+...    ..
T Consensus        56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~-~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~  134 (262)
T 3ocu_A           56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDG-KDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSG  134 (262)
T ss_dssp             TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCH-HHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHH
T ss_pred             CCCeEEEEECCCcCCCCchhhhhhccccccCCH-HHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHH
Confidence            45679999999999998631    000011100 00000001123567899999999998 6799999998765    46


Q ss_pred             HHHHHHHhCCCCCeee-eEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhcc
Q 021254          211 AGQLLDILDPNQTLIG-QRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQL  267 (315)
Q Consensus       211 A~~vL~~LDp~~~~f~-~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~  267 (315)
                      +..-|+.++... +.. +.+.|..... +..-.+.|...|.  .-++.|.|...-+..
T Consensus       135 T~~~L~~lGi~~-~~~~~Lilr~~~~~-K~~~r~~l~~~Gy--~iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          135 TIDDMKRLGFNG-VEESAFYLKKDKSA-KAARFAEIEKQGY--EIVLYVGDNLDDFGN  188 (262)
T ss_dssp             HHHHHHHHTCSC-CSGGGEEEESSCSC-CHHHHHHHHHTTE--EEEEEEESSGGGGCS
T ss_pred             HHHHHHHcCcCc-ccccceeccCCCCC-hHHHHHHHHhcCC--CEEEEECCChHHhcc
Confidence            777777776653 221 4555654321 2222333433344  348999998877643

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=96.19  E-value=0.0046  Score=55.30  Aligned_cols=95  Identities=17%  Similarity=0.154  Sum_probs=74.1

Q ss_pred             EeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCC-----
Q 021254          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGR-----  250 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgr-----  250 (315)
                      +...|++.++|+.+++  .+.++|.|++...++..+++.++..  .|...+..+.+...+..   |.+-++.+|.     
T Consensus       113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  190 (275)
T 2qlt_A          113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQ  190 (275)
T ss_dssp             CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSS
T ss_pred             CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcccc
Confidence            5678999999999996  5999999999999999999999765  36666666654433322   5566778899     


Q ss_pred             --CCCcEEEEECCchhhccCCCCeeeecc
Q 021254          251 --DLARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       251 --dl~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                        ++++|+.|.|++.-.......|+.+-.
T Consensus       191 ~~~~~~~i~~GDs~nDi~~a~~AG~~~i~  219 (275)
T 2qlt_A          191 DPSKSKVVVFEDAPAGIAAGKAAGCKIVG  219 (275)
T ss_dssp             CGGGSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred             CCCcceEEEEeCCHHHHHHHHHcCCEEEE
Confidence              999999999999877655566655444

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=96.16  E-value=0.0073  Score=53.36  Aligned_cols=57  Identities=16%  Similarity=0.067  Sum_probs=41.0

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+++...                       ..|...+.|+++. +...+++.|......+..+++.++.
T Consensus         3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~   59 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQKQ-----------------------LPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGI   59 (258)
T ss_dssp             CCEEEECTBTTTBCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTC
T ss_pred             ceEEEEeCCCCCcCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCC
Confidence            357899999999997421                       3466667777776 4677888777777777777777755


Q ss_pred             C
Q 021254          221 N  221 (315)
Q Consensus       221 ~  221 (315)
                      .
T Consensus        60 ~   60 (258)
T 2pq0_A           60 D   60 (258)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=96.02  E-value=0.0019  Score=54.84  Aligned_cols=93  Identities=11%  Similarity=0.096  Sum_probs=72.2

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCee-eeEEEecceeee--CC---cccccccccCCCCCc
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFA--DG---EYLKDLTILGRDLAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f-~~rl~Re~C~~~--~g---~y~KDL~~Lgrdl~~  254 (315)
                      +...|++.++|+.+..  .++|.|++...++..+++.++... +| ...++.+.+...  ++   .+.+-++.+|.++++
T Consensus        86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~  162 (229)
T 2fdr_A           86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKP-YFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR  162 (229)
T ss_dssp             CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGG-GTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHH-hccceEEeccccccCCCCcCHHHHHHHHHHcCCChhH
Confidence            4568999999999986  899999999999999999997764 77 777776654333  22   255667788999999


Q ss_pred             EEEEECCchhhccCCCCeeeec
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      ++.|+|++.-.......|+.+-
T Consensus       163 ~i~iGD~~~Di~~a~~aG~~~i  184 (229)
T 2fdr_A          163 VVVVEDSVHGIHGARAAGMRVI  184 (229)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEE
T ss_pred             eEEEcCCHHHHHHHHHCCCEEE
Confidence            9999999987655556666543

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=95.99  E-value=0.003  Score=57.23  Aligned_cols=92  Identities=14%  Similarity=0.160  Sum_probs=68.5

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHh--C---------CCCCeeeeEEEecceeeeCC---ccccccc
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDIL--D---------PNQTLIGQRVYRDSCVFADG---EYLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~L--D---------p~~~~f~~rl~Re~C~~~~g---~y~KDL~  246 (315)
                      +...||+.++|++   .+.++|.|++....+..+++..  .         .. .+|...+...-+. .+.   .|.+-++
T Consensus       124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~-~~~~~~f~~~~~g-~KP~p~~~~~a~~  198 (253)
T 2g80_A          124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLN-SYIDGYFDINTSG-KKTETQSYANILR  198 (253)
T ss_dssp             BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCG-GGCCEEECHHHHC-CTTCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchH-hhcceEEeeeccC-CCCCHHHHHHHHH
Confidence            4568999999999   8999999999999999999976  2         22 2454443221101 233   3788889


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeeecc
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      .+|.+++++++|+|++.........|+....
T Consensus       199 ~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~  229 (253)
T 2g80_A          199 DIGAKASEVLFLSDNPLELDAAAGVGIATGL  229 (253)
T ss_dssp             HHTCCGGGEEEEESCHHHHHHHHTTTCEEEE
T ss_pred             HcCCCcccEEEEcCCHHHHHHHHHcCCEEEE
Confidence            9999999999999999877666667776543

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=95.99  E-value=0.011  Score=53.45  Aligned_cols=57  Identities=19%  Similarity=0.174  Sum_probs=44.6

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+++...                       ..|...+.|+++. +...+++.|......+..+++.++..
T Consensus         5 kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   61 (288)
T 1nrw_A            5 KLIAIDLDGTLLNSKHQ-----------------------VSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK   61 (288)
T ss_dssp             CEEEEECCCCCSCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred             EEEEEeCCCCCCCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            57999999999997421                       3566778888887 57889999998888888888887654


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        62 ~   62 (288)
T 1nrw_A           62 T   62 (288)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=95.97  E-value=0.012  Score=53.22  Aligned_cols=59  Identities=20%  Similarity=0.164  Sum_probs=46.6

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +.+.+++||||||+.+...                       .-|...+.|+++. +...++|-|......+..+++.++
T Consensus         8 ~~~li~~DlDGTLl~~~~~-----------------------~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~   64 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLG   64 (275)
T ss_dssp             CCEEEEEECTTTTSCSSCC-----------------------SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTT
T ss_pred             CceEEEEeCCCCCCCCCCc-----------------------CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence            4578999999999986321                       1245678888887 579999999999999999999887


Q ss_pred             CCC
Q 021254          220 PNQ  222 (315)
Q Consensus       220 p~~  222 (315)
                      ...
T Consensus        65 ~~~   67 (275)
T 1xvi_A           65 LQG   67 (275)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            653

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=95.82  E-value=0.0092  Score=53.81  Aligned_cols=59  Identities=17%  Similarity=0.133  Sum_probs=39.4

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      .+.+.+++||||||+.+...                      ..-|...+.|+++. +...++|-|.....-+..+++.+
T Consensus        19 ~~~kli~~DlDGTLl~~~~~----------------------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l   76 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKDGSL----------------------LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPI   76 (283)
T ss_dssp             CCCCEEEECCBTTTBSTTCS----------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGG
T ss_pred             cCceEEEEeCcCCCCCCCCC----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Confidence            55678999999999987421                      02455666666665 55777777776666666666655


Q ss_pred             CC
Q 021254          219 DP  220 (315)
Q Consensus       219 Dp  220 (315)
                      .+
T Consensus        77 ~~   78 (283)
T 3dao_A           77 KH   78 (283)
T ss_dssp             GG
T ss_pred             CC
Confidence            43

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=95.76  E-value=0.0075  Score=53.22  Aligned_cols=56  Identities=20%  Similarity=0.090  Sum_probs=33.0

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.++|||||||+.+...                       .-|...+.|+++. +...+++.|.....-+..+++.++.
T Consensus         5 ~kli~fDlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~   61 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEVYG-----------------------IPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGV   61 (274)
T ss_dssp             CCEEEECSBTTTBBTTTB-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCC
T ss_pred             ceEEEEECCCCCCCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCC
Confidence            467999999999998532                       2344445555544 4455555555554444444444433

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=95.72  E-value=0.012  Score=51.96  Aligned_cols=55  Identities=9%  Similarity=-0.008  Sum_probs=40.2

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc---hhhHHHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ---SIYAGQLLDI  217 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~---~~YA~~vL~~  217 (315)
                      .+.++|||||||+++..                        .-|+..+.|+++. +...+++.|..+   ..-....++.
T Consensus         8 ~kli~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~   63 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSVT------------------------PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRS   63 (268)
T ss_dssp             CSEEEEECBTTTEETTE------------------------ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHH
T ss_pred             CCEEEEcCcCcEECCCE------------------------eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHH
Confidence            56899999999998531                        3488999999998 679999999943   3333344555


Q ss_pred             hCC
Q 021254          218 LDP  220 (315)
Q Consensus       218 LDp  220 (315)
                      ++.
T Consensus        64 lg~   66 (268)
T 3qgm_A           64 FGL   66 (268)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            544

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=95.68  E-value=0.02  Score=51.19  Aligned_cols=56  Identities=16%  Similarity=0.085  Sum_probs=44.3

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+.+...                       .-|...+.|++ . +...++|-|......+..+++.++..
T Consensus         3 kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~   58 (268)
T 1nf2_A            3 RVFVFDLDGTLLNDNLE-----------------------ISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKR   58 (268)
T ss_dssp             CEEEEECCCCCSCTTSC-----------------------CCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSS
T ss_pred             cEEEEeCCCcCCCCCCc-----------------------cCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCC
Confidence            57899999999986321                       34667778887 5 67999999999988888999888765


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        59 ~   59 (268)
T 1nf2_A           59 T   59 (268)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=95.62  E-value=0.0064  Score=56.40  Aligned_cols=95  Identities=12%  Similarity=0.134  Sum_probs=72.8

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeee------------CC-ccccccc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA------------DG-EYLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~------------~g-~y~KDL~  246 (315)
                      +..+|++.++|+++.+ .+.++|.|++...+++.+++.++... +|...+...+....            ++ .+.+-++
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~  255 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY-AQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ  255 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe-EEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence            5689999999999994 69999999999999999999998875 77766543332221            11 2455566


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      .+|.++++|+.|.|++.-...-...|+.+-
T Consensus       256 ~lgi~~~~~v~vGDs~nDi~~a~~aG~~va  285 (335)
T 3n28_A          256 QYDVEIHNTVAVGDGANDLVMMAAAGLGVA  285 (335)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HcCCChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence            789999999999999987655556666654

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=95.61  E-value=0.0086  Score=53.26  Aligned_cols=55  Identities=18%  Similarity=0.209  Sum_probs=40.0

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc---hhhHHHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ---SIYAGQLLDI  217 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~---~~YA~~vL~~  217 (315)
                      .+.++|||||||+.+..                       .. |+..++|+++. +...+++.|...   ..-+...++.
T Consensus         5 ~kli~~DlDGTLl~~~~-----------------------~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~   60 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGKS-----------------------RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRG   60 (264)
T ss_dssp             CCEEEECCBTTTEETTE-----------------------EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHT
T ss_pred             CCEEEEeCCCceEeCCE-----------------------EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            46899999999999742                       14 89999999998 679999999543   3333444554


Q ss_pred             hCC
Q 021254          218 LDP  220 (315)
Q Consensus       218 LDp  220 (315)
                      ++.
T Consensus        61 lg~   63 (264)
T 3epr_A           61 FNV   63 (264)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            443

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=95.61  E-value=0.016  Score=52.37  Aligned_cols=57  Identities=19%  Similarity=0.174  Sum_probs=46.3

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+.+...                       .-|...+.|+++. +...++|.|......+..+++.++.
T Consensus         5 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l   61 (282)
T 1rkq_A            5 IKLIAIDMDGTLLLPDHT-----------------------ISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHM   61 (282)
T ss_dssp             CCEEEECCCCCCSCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTC
T ss_pred             ceEEEEeCCCCCCCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence            357999999999986321                       3567788899887 5799999999998889999998876


Q ss_pred             C
Q 021254          221 N  221 (315)
Q Consensus       221 ~  221 (315)
                      .
T Consensus        62 ~   62 (282)
T 1rkq_A           62 E   62 (282)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=95.36  E-value=0.023  Score=50.39  Aligned_cols=54  Identities=15%  Similarity=0.261  Sum_probs=42.4

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+ +...                       . +-..+.|+++. +...++|.|......+..+++.++..
T Consensus         3 kli~~DlDGTLl-~~~~-----------------------~-~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A            3 RLIFLDIDKTLI-PGYE-----------------------P-DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             EEEEECCSTTTC-TTSC-----------------------S-GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred             cEEEEeCCCCcc-CCCC-----------------------c-HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            578999999999 4210                       1 22667888887 67999999999999999999998764

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=95.33  E-value=0.03  Score=46.50  Aligned_cols=86  Identities=14%  Similarity=0.143  Sum_probs=62.7

Q ss_pred             eeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC-CCeeeeEEEe--cce----eee---CCcccccccc-cC
Q 021254          182 RQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN-QTLIGQRVYR--DSC----VFA---DGEYLKDLTI-LG  249 (315)
Q Consensus       182 ~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~-~~~f~~rl~R--e~C----~~~---~g~y~KDL~~-Lg  249 (315)
                      ..+|++.++|+.+. ..+.++|.|++...++..+++.++.. ..+|...+..  +.+    ...   ++.+.+-+.. +|
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  161 (219)
T 3kd3_A           82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG  161 (219)
T ss_dssp             TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred             cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence            37899999999999 46999999999999999999999874 2355543332  221    111   2334555544 48


Q ss_pred             CCCCcEEEEECCchhhcc
Q 021254          250 RDLARIAIVDNTPQVFQL  267 (315)
Q Consensus       250 rdl~~vIIIDDsp~~~~~  267 (315)
                      .++++++.|.|+..-...
T Consensus       162 ~~~~~~~~vGD~~~Di~~  179 (219)
T 3kd3_A          162 LIDGEVIAIGDGYTDYQL  179 (219)
T ss_dssp             GCCSEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEECCHhHHHH
Confidence            999999999999986644

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.25  E-value=0.025  Score=50.61  Aligned_cols=53  Identities=17%  Similarity=0.218  Sum_probs=37.9

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHH
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLL  215 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL  215 (315)
                      .+.+.+++||||||+.+...                       .-|...+.|+++.+...++|-|......+.+.+
T Consensus        11 ~~~kli~~DlDGTLl~~~~~-----------------------is~~~~~al~~l~~~i~v~iaTGR~~~~~~~~l   63 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPARQK-----------------------IDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQL   63 (262)
T ss_dssp             --CEEEEEESBTTTBSTTSC-----------------------CCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHH
T ss_pred             cCeEEEEEeCccCCCCCCCc-----------------------CCHHHHHHHHHHHhCCEEEEEcCCCHHHHHHHH
Confidence            45678999999999986321                       357788999999855888888876655444444

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=94.23  E-value=0.0032  Score=56.89  Aligned_cols=86  Identities=10%  Similarity=0.163  Sum_probs=67.9

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVD  259 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIID  259 (315)
                      ...||++.++|++|++ .+.++|.|......+..+++.++... +|...+        ...+.+-++.++.++++|++|.
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~~~--------p~~k~~~~~~l~~~~~~~~~VG  205 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-YYSNLS--------PEDKVRIIEKLKQNGNKVLMIG  205 (263)
Confidence            4589999999999995 59999999999999999999998764 565443        2234556677788889999999


Q ss_pred             CCchhhccCCCCeeee
Q 021254          260 NTPQVFQLQVDNGIPI  275 (315)
Q Consensus       260 Dsp~~~~~q~~NgI~I  275 (315)
                      |+..-...-...|+.|
T Consensus       206 D~~~D~~aa~~Agv~v  221 (263)
T 2yj3_A          206 DGVNDAAALALADVSV  221 (263)
Confidence            9987665555666654

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=95.18  E-value=0.026  Score=53.79  Aligned_cols=57  Identities=16%  Similarity=0.160  Sum_probs=45.3

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc----hhhHHHH
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ----SIYAGQL  214 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~----~~YA~~v  214 (315)
                      +++++++||+||||++...                        .=||+.++|++|. ..+.+++.|++.    +.+++.+
T Consensus        11 ~~~~~~l~D~DGvl~~g~~------------------------~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l   66 (352)
T 3kc2_A           11 SKKIAFAFDIDGVLFRGKK------------------------PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFI   66 (352)
T ss_dssp             -CCEEEEECCBTTTEETTE------------------------ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHH
T ss_pred             ccCCEEEEECCCeeEcCCe------------------------eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHH
Confidence            4678999999999998631                        2499999999998 579999999875    6777777


Q ss_pred             HHHhCC
Q 021254          215 LDILDP  220 (315)
Q Consensus       215 L~~LDp  220 (315)
                      -+.++.
T Consensus        67 ~~~lgi   72 (352)
T 3kc2_A           67 SSKLDV   72 (352)
T ss_dssp             HHHHTS
T ss_pred             HHhcCC
Confidence            766654

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=95.17  E-value=0.013  Score=51.90  Aligned_cols=55  Identities=16%  Similarity=0.114  Sum_probs=39.3

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch---hhHHHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS---IYAGQLLDI  217 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~---~YA~~vL~~  217 (315)
                      .+.++|||||||+++..                        .-|+..++|+++. +...+++.|..+.   .-+...++.
T Consensus         6 ~kli~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~   61 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNGTE------------------------KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS   61 (266)
T ss_dssp             CSEEEEECSSSTTCHHH------------------------HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHH
T ss_pred             CCEEEEeCcCceEeCCE------------------------eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence            56899999999998631                        2478899999998 6799999988433   333344555


Q ss_pred             hCC
Q 021254          218 LDP  220 (315)
Q Consensus       218 LDp  220 (315)
                      ++.
T Consensus        62 lg~   64 (266)
T 3pdw_A           62 FDI   64 (266)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=95.10  E-value=0.0072  Score=52.90  Aligned_cols=94  Identities=10%  Similarity=-0.063  Sum_probs=70.0

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCee-eeEEEecceeeeCC---cccccccccCCCC-Cc
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFADG---EYLKDLTILGRDL-AR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f-~~rl~Re~C~~~~g---~y~KDL~~Lgrdl-~~  254 (315)
                      ....|++.++|+.+.+ .+.++|.|++....+..+++.++..+ +| +..++.+.+...+.   .+.+-++.+|.++ ++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  180 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  180 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcc-cChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcC
Confidence            4567999999999984 69999999999999999999886554 43 55555555433322   2455667789999 99


Q ss_pred             EEEEECCchhhccCCCCeeee
Q 021254          255 IAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      ++.|.|++.-.......|+.+
T Consensus       181 ~i~iGD~~nDi~~a~~aG~~~  201 (267)
T 1swv_A          181 MIKVGDTVSDMKEGRNAGMWT  201 (267)
T ss_dssp             EEEEESSHHHHHHHHHTTSEE
T ss_pred             EEEEeCCHHHHHHHHHCCCEE
Confidence            999999998766555666543

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=95.09  E-value=0.03  Score=49.40  Aligned_cols=54  Identities=22%  Similarity=0.146  Sum_probs=37.7

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCC---chhhHHHHHH
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAG---QSIYAGQLLD  216 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas---~~~YA~~vL~  216 (315)
                      +.+++++||||||+.+..                        .-|+..++|+++. +...+++.|..   ....+...++
T Consensus        16 ~~~~v~~DlDGTLl~~~~------------------------~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~   71 (271)
T 1vjr_A           16 KIELFILDMDGTFYLDDS------------------------LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLR   71 (271)
T ss_dssp             GCCEEEECCBTTTEETTE------------------------ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHH
T ss_pred             CCCEEEEcCcCcEEeCCE------------------------ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHH
Confidence            456899999999998721                        3477888888887 57888888843   3333344445


Q ss_pred             Hh
Q 021254          217 IL  218 (315)
Q Consensus       217 ~L  218 (315)
                      .+
T Consensus        72 ~l   73 (271)
T 1vjr_A           72 NM   73 (271)
T ss_dssp             HT
T ss_pred             Hc
Confidence            54

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=94.94  E-value=0.035  Score=50.99  Aligned_cols=55  Identities=16%  Similarity=0.089  Sum_probs=44.6

Q ss_pred             CeEEEEeCCcceece-ecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHH--HH
Q 021254          142 PITLVLDLDETLVHS-SFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLL--DI  217 (315)
Q Consensus       142 k~tLVLDLDeTLVhs-~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL--~~  217 (315)
                      .+.+++||||||+.+ ...                       .-|...+.|+++. +...++|-|......+..++  +.
T Consensus        27 ikli~~DlDGTLl~~~~~~-----------------------is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~   83 (301)
T 2b30_A           27 IKLLLIDFDGTLFVDKDIK-----------------------VPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEEN   83 (301)
T ss_dssp             CCEEEEETBTTTBCCTTTC-----------------------SCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHH
T ss_pred             ccEEEEECCCCCcCCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHh
Confidence            468999999999986 321                       3467888898887 57999999999988888888  87


Q ss_pred             hC
Q 021254          218 LD  219 (315)
Q Consensus       218 LD  219 (315)
                      ++
T Consensus        84 l~   85 (301)
T 2b30_A           84 LK   85 (301)
T ss_dssp             HH
T ss_pred             hc
Confidence            65

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=94.92  E-value=0.039  Score=48.53  Aligned_cols=53  Identities=15%  Similarity=0.197  Sum_probs=38.5

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +++.+++||||||+.+...                       .-|...+.|+++.+...++|-|.....   .+.+.+.
T Consensus         5 ~~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~i~v~iaTGR~~~---~~~~~l~   57 (246)
T 2amy_A            5 GPALCLFDVDGTLTAPRQK-----------------------ITKEMDDFLQKLRQKIKIGVVGGSDFE---KVQEQLG   57 (246)
T ss_dssp             CSEEEEEESBTTTBCTTSC-----------------------CCHHHHHHHHHHTTTSEEEEECSSCHH---HHHHHHC
T ss_pred             CceEEEEECCCCcCCCCcc-----------------------cCHHHHHHHHHHHhCCeEEEEcCCCHH---HHHHHhc
Confidence            5678999999999986321                       357788999999855778888876543   3555664

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=94.81  E-value=0.018  Score=51.50  Aligned_cols=55  Identities=13%  Similarity=0.102  Sum_probs=36.1

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCch-HHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPY-LHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~-l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      .+.+++||||||+++...                       .-|. +.+.|+++. +...++|-|......+..+++.+.
T Consensus         3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~   59 (271)
T 1rlm_A            3 VKVIVTDMDGTFLNDAKT-----------------------YNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELK   59 (271)
T ss_dssp             CCEEEECCCCCCSCTTSC-----------------------CCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTT
T ss_pred             ccEEEEeCCCCCCCCCCc-----------------------CCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcC
Confidence            357999999999997421                       2344 356666666 457777777777666655555543

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=94.80  E-value=0.026  Score=49.97  Aligned_cols=54  Identities=22%  Similarity=0.171  Sum_probs=42.2

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      +.+++||||||+.+..                        .-+...+.|+++.+...++|-|......+..+++.++.
T Consensus         4 ~li~~DlDGTLl~~~~------------------------~~~~~~~~l~~~~~gi~v~iaTGR~~~~~~~~~~~l~l   57 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQ------------------------ALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGL   57 (244)
T ss_dssp             EEEEECTBTTTBSCHH------------------------HHHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTC
T ss_pred             eEEEEeCCCCCcCCHH------------------------HHHHHHHHHHHhcCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence            4789999999998631                        01456677777777889999999988888899988654

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=94.71  E-value=0.042  Score=49.16  Aligned_cols=53  Identities=17%  Similarity=0.193  Sum_probs=40.3

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .+.+++||||||+.+...                       .-|...+.|+++. +...++|-|......   +.+.+..
T Consensus         4 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~   57 (246)
T 3f9r_A            4 RVLLLFDVDGTLTPPRLC-----------------------QTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR   57 (246)
T ss_dssp             SEEEEECSBTTTBSTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred             ceEEEEeCcCCcCCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence            578999999999987421                       3577889999998 568999999887663   4555543

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=94.64  E-value=0.018  Score=52.44  Aligned_cols=56  Identities=11%  Similarity=0.067  Sum_probs=36.6

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCch-HHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPY-LHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~-l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      .+.++|||||||+.+...                       .-|. ..+.|+++. +...+++.|......+..+++.+.
T Consensus        37 iKli~fDlDGTLld~~~~-----------------------i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~   93 (304)
T 3l7y_A           37 VKVIATDMDGTFLNSKGS-----------------------YDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCH   93 (304)
T ss_dssp             CSEEEECCCCCCSCTTSC-----------------------CCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTG
T ss_pred             eEEEEEeCCCCCCCCCCc-----------------------cCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhC
Confidence            578999999999987431                       2344 555666665 557777777666666655555544


Q ss_pred             C
Q 021254          220 P  220 (315)
Q Consensus       220 p  220 (315)
                      .
T Consensus        94 ~   94 (304)
T 3l7y_A           94 E   94 (304)
T ss_dssp             G
T ss_pred             C
Confidence            3

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=94.60  E-value=0.032  Score=49.55  Aligned_cols=52  Identities=13%  Similarity=0.223  Sum_probs=39.2

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      +.+++|+||||++...                       .. |+..++|+++. +...+++.|.....-...+.+.+
T Consensus         2 k~i~~D~DGtL~~~~~-----------------------~~-~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l   54 (263)
T 1zjj_A            2 VAIIFDMDGVLYRGNR-----------------------AI-PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL   54 (263)
T ss_dssp             EEEEEECBTTTEETTE-----------------------EC-TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH
T ss_pred             eEEEEeCcCceEeCCE-----------------------eC-ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            5789999999997521                       13 78999999998 57899999987765555555554

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=94.48  E-value=0.055  Score=46.92  Aligned_cols=42  Identities=19%  Similarity=0.126  Sum_probs=28.7

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhc-ccEEEEEcCCc
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVAS-MFDVVIFTAGQ  207 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~-~fEIvIfTas~  207 (315)
                      .+.++|||||||+++...                        -|+..+.++.+.+ .+.+++.|...
T Consensus         7 ik~i~fDlDGTLld~~~~------------------------~~~~~~ai~~l~~~G~~~~~~t~~~   49 (259)
T 2ho4_A            7 LKAVLVDLNGTLHIEDAA------------------------VPGAQEALKRLRATSVMVRFVTNTT   49 (259)
T ss_dssp             CCEEEEESSSSSCC---C------------------------CTTHHHHHHHHHTSSCEEEEEECCS
T ss_pred             CCEEEEeCcCcEEeCCEe------------------------CcCHHHHHHHHHHCCCeEEEEeCCC
Confidence            468999999999996421                        2566777777774 57778887443

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=94.35  E-value=0.042  Score=49.16  Aligned_cols=57  Identities=12%  Similarity=-0.074  Sum_probs=42.0

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcC---CchhhHHHHHH
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTA---GQSIYAGQLLD  216 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTa---s~~~YA~~vL~  216 (315)
                      +.+.++|||||||++...                        .-|+..++|+++. +...+++.|.   .........++
T Consensus        13 ~~k~i~~D~DGtL~~~~~------------------------~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~   68 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTYNG------------------------LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYH   68 (284)
T ss_dssp             GCSEEEECSBTTTEETTE------------------------ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHH
T ss_pred             cCCEEEEcCcCCcCcCCe------------------------eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHH
Confidence            356899999999998531                        2488999999998 6899999996   33444555666


Q ss_pred             HhCCC
Q 021254          217 ILDPN  221 (315)
Q Consensus       217 ~LDp~  221 (315)
                      .++..
T Consensus        69 ~lg~~   73 (284)
T 2hx1_A           69 KLGLF   73 (284)
T ss_dssp             HTTCT
T ss_pred             HCCcC
Confidence            66554

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=94.03  E-value=0.057  Score=45.78  Aligned_cols=16  Identities=25%  Similarity=0.492  Sum_probs=13.7

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++|||||||+++.
T Consensus         3 ~k~i~fDlDGTLl~~~   18 (250)
T 2c4n_A            3 IKNVICDIDGVLMHDN   18 (250)
T ss_dssp             CCEEEEECBTTTEETT
T ss_pred             ccEEEEcCcceEEeCC
Confidence            3579999999999974

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=94.01  E-value=0.029  Score=46.58  Aligned_cols=94  Identities=15%  Similarity=0.161  Sum_probs=67.1

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecc-----------ee-eeCC-ccccccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDS-----------CV-FADG-EYLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~-----------C~-~~~g-~y~KDL~  246 (315)
                      ..+.|++.++|+.+. +.+.++|+|++...++..+++.++... +|...+....           +. ..++ .+.+-++
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~  153 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK  153 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe-EEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence            456799999999998 569999999999999999999988754 5554433211           10 0111 1333445


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      .+|.++++++.|.|++.-...-...|+.+
T Consensus       154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~  182 (211)
T 1l7m_A          154 IEGINLEDTVAVGDGANDISMFKKAGLKI  182 (211)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred             HcCCCHHHEEEEecChhHHHHHHHCCCEE
Confidence            67999999999999998776555667764

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=93.78  E-value=0.065  Score=47.08  Aligned_cols=49  Identities=16%  Similarity=0.162  Sum_probs=34.5

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQL  214 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~v  214 (315)
                      .+.++|||||||+.+..                        .-|++.++|+.+. ....+++.|.....-...+
T Consensus         5 ~k~v~fDlDGTL~~~~~------------------------~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~   54 (264)
T 1yv9_A            5 YQGYLIDLDGTIYLGKE------------------------PIPAGKRFVERLQEKDLPFLFVTNNTTKSPETV   54 (264)
T ss_dssp             CCEEEECCBTTTEETTE------------------------ECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHH
T ss_pred             CCEEEEeCCCeEEeCCE------------------------ECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Confidence            46899999999998632                        1267788888886 5678888877654333333

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=93.70  E-value=0.05  Score=47.95  Aligned_cols=15  Identities=40%  Similarity=0.463  Sum_probs=13.2

Q ss_pred             CeEEEEeCCcceece
Q 021254          142 PITLVLDLDETLVHS  156 (315)
Q Consensus       142 k~tLVLDLDeTLVhs  156 (315)
                      .+.+++||||||+++
T Consensus        12 iKli~~DlDGTLl~~   26 (268)
T 3r4c_A           12 IKVLLLDVDGTLLSF   26 (268)
T ss_dssp             CCEEEECSBTTTBCT
T ss_pred             eEEEEEeCCCCCcCC
Confidence            578999999999984

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=93.69  E-value=0.11  Score=44.94  Aligned_cols=30  Identities=10%  Similarity=0.142  Sum_probs=19.5

Q ss_pred             ccccCCCCCcEEEEECCc-hhhccCCCCeee
Q 021254          245 LTILGRDLARIAIVDNTP-QVFQLQVDNGIP  274 (315)
Q Consensus       245 L~~Lgrdl~~vIIIDDsp-~~~~~q~~NgI~  274 (315)
                      ++.+|.++++|+.|.|++ .-.......|+.
T Consensus       200 ~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~  230 (271)
T 2x4d_A          200 LQAIGVEAHQAVMIGDDIVGDVGGAQRCGMR  230 (271)
T ss_dssp             HHHHTCCGGGEEEEESCTTTTHHHHHHTTCE
T ss_pred             HHHhCCCcceEEEECCCcHHHHHHHHHCCCc
Confidence            345688888999999987 544433344443

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=93.67  E-value=0.025  Score=50.09  Aligned_cols=54  Identities=26%  Similarity=0.149  Sum_probs=40.8

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      +.+++||||||+++...                      ...|...+.|+++. +...+++.|... ..+..+++.++
T Consensus         3 kli~~DlDGTLl~~~~~----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~   57 (261)
T 2rbk_A            3 KALFFDIDGTLVSFETH----------------------RIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQ   57 (261)
T ss_dssp             CEEEECSBTTTBCTTTS----------------------SCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHH
T ss_pred             cEEEEeCCCCCcCCCCC----------------------cCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhC
Confidence            57899999999997421                      02567778888887 568999999887 77767766665

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=93.64  E-value=0.073  Score=48.36  Aligned_cols=55  Identities=16%  Similarity=0.102  Sum_probs=38.9

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcC---CchhhHHHHHH
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTA---GQSIYAGQLLD  216 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTa---s~~~YA~~vL~  216 (315)
                      +.+.+++|+||||+...                        ..-|++.++|+++. +.+.+++.|.   .........++
T Consensus        20 ~~k~i~~D~DGTL~~~~------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~   75 (306)
T 2oyc_A           20 RAQGVLFDCDGVLWNGE------------------------RAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFA   75 (306)
T ss_dssp             HCSEEEECSBTTTEETT------------------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHH
T ss_pred             hCCEEEECCCCcEecCC------------------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHH
Confidence            34689999999999752                        13478999999998 6799999995   33333334444


Q ss_pred             HhC
Q 021254          217 ILD  219 (315)
Q Consensus       217 ~LD  219 (315)
                      .+.
T Consensus        76 ~~g   78 (306)
T 2oyc_A           76 RLG   78 (306)
T ss_dssp             HTT
T ss_pred             hcC
Confidence            443

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=93.07  E-value=0.063  Score=47.39  Aligned_cols=57  Identities=19%  Similarity=0.177  Sum_probs=40.8

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      +.+++||||||+.....+..                  -..-|...+.|+++. +. .++|-|......+..+++.+
T Consensus         2 kli~~DlDGTLl~~~~~~~~------------------~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l   59 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIMNPEE------------------SYADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD   59 (239)
T ss_dssp             CEEEEECBTTTBCCCSCGGG------------------CCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred             eEEEEecCCCCcCCCCCccc------------------CCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence            46899999999985311000                  013578889999998 57 88888988877777776554

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=92.94  E-value=0.034  Score=45.79  Aligned_cols=91  Identities=12%  Similarity=0.093  Sum_probs=63.1

Q ss_pred             EeeCchHHHHHHHhhc-ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeee-C---CcccccccccCCCCCcE
Q 021254          181 VRQRPYLHMFLEAVAS-MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFA-D---GEYLKDLTILGRDLARI  255 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~-~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~-~---g~y~KDL~~Lgrdl~~v  255 (315)
                      +..+|++.++|+.+.+ .+.++|.|++...++..+ +.++... ++....+.+..... +   .....-+..+  +++++
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~  153 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEF-MANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFI  153 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEE-EEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCE
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchh-heeeEEeeCCceECCcCCccCHHHHHHhc--CcCcE
Confidence            4689999999999995 599999999999999988 8887654 44444433322111 1   1112333444  88999


Q ss_pred             EEEECCchhhccCCCCeeee
Q 021254          256 AIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I  275 (315)
                      +.|.|++.-.......|+.|
T Consensus       154 i~iGD~~~Di~~~~~ag~~v  173 (201)
T 4ap9_A          154 LAMGDGYADAKMFERADMGI  173 (201)
T ss_dssp             EEEECTTCCHHHHHHCSEEE
T ss_pred             EEEeCCHHHHHHHHhCCceE
Confidence            99999998665555566654

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=92.23  E-value=0.1  Score=46.08  Aligned_cols=45  Identities=24%  Similarity=0.118  Sum_probs=33.6

Q ss_pred             EEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHH
Q 021254          144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAG  212 (315)
Q Consensus       144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~  212 (315)
                      .+++||||||+.+. .                       .-|...+-|+++. +...++|.|.....-+.
T Consensus         2 li~~DlDGTLl~~~-~-----------------------i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~   47 (259)
T 3zx4_A            2 IVFTDLDGTLLDER-G-----------------------ELGPAREALERLRALGVPVVPVTAKTRKEVE   47 (259)
T ss_dssp             EEEECCCCCCSCSS-S-----------------------SCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH
T ss_pred             EEEEeCCCCCcCCC-c-----------------------CCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH
Confidence            58999999999874 2                       3466777888886 67888888776665544

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=90.68  E-value=0.1  Score=43.10  Aligned_cols=17  Identities=29%  Similarity=0.477  Sum_probs=14.5

Q ss_pred             CCeEEEEeCCcceecee
Q 021254          141 LPITLVLDLDETLVHSS  157 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~  157 (315)
                      +.+.++|||||||+++.
T Consensus         4 ~~k~i~fDlDGTL~d~~   20 (211)
T 1l7m_A            4 KKKLILFDFDSTLVNNE   20 (211)
T ss_dssp             CCEEEEEECCCCCBSSC
T ss_pred             CCcEEEEeCCCCCCCcc
Confidence            34689999999999984

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=86.43  E-value=0.26  Score=42.69  Aligned_cols=18  Identities=39%  Similarity=0.287  Sum_probs=15.1

Q ss_pred             CCCeEEEEeCCcceecee
Q 021254          140 GLPITLVLDLDETLVHSS  157 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~  157 (315)
                      ...+.++|||||||+++.
T Consensus        21 ~~~k~iiFDlDGTL~d~~   38 (243)
T 2hsz_A           21 TQFKLIGFDLDGTLVNSL   38 (243)
T ss_dssp             SSCSEEEECSBTTTEECH
T ss_pred             ccCCEEEEcCCCcCCCCH
Confidence            445689999999999985

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=86.07  E-value=0.26  Score=41.69  Aligned_cols=17  Identities=47%  Similarity=0.600  Sum_probs=14.4

Q ss_pred             CeEEEEeCCcceeceec
Q 021254          142 PITLVLDLDETLVHSSF  158 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~  158 (315)
                      .+.++|||||||+++..
T Consensus         4 ~k~viFDlDGTL~d~~~   20 (210)
T 2ah5_A            4 ITAIFFDLDGTLVDSSI   20 (210)
T ss_dssp             CCEEEECSBTTTEECHH
T ss_pred             CCEEEEcCCCcCccCHH
Confidence            35899999999999853

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=85.73  E-value=0.27  Score=40.74  Aligned_cols=16  Identities=38%  Similarity=0.422  Sum_probs=14.0

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++|||||||+++.
T Consensus         6 ~k~v~fDlDGTL~d~~   21 (225)
T 3d6j_A            6 YTVYLFDFDYTLADSS   21 (225)
T ss_dssp             CSEEEECCBTTTEECH
T ss_pred             CCEEEEeCCCCCCCCH
Confidence            4689999999999875

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=85.47  E-value=0.3  Score=41.08  Aligned_cols=17  Identities=24%  Similarity=0.384  Sum_probs=14.4

Q ss_pred             CeEEEEeCCcceeceec
Q 021254          142 PITLVLDLDETLVHSSF  158 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~  158 (315)
                      .+.++|||||||+++..
T Consensus         4 ~k~iifDlDGTL~d~~~   20 (234)
T 2hcf_A            4 RTLVLFDIDGTLLKVES   20 (234)
T ss_dssp             CEEEEECCBTTTEEECT
T ss_pred             ceEEEEcCCCCcccCcc
Confidence            46899999999999853

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=84.77  E-value=0.32  Score=39.75  Aligned_cols=16  Identities=25%  Similarity=0.335  Sum_probs=12.3

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      |+.++|||||||+++.
T Consensus         9 k~ivifDlDGTL~d~~   24 (201)
T 4ap9_A            9 KKVAVIDIEGTLTDFE   24 (201)
T ss_dssp             SCEEEEECBTTTBCCC
T ss_pred             ceeEEecccCCCcchH
Confidence            3445599999999764

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=84.51  E-value=0.34  Score=40.05  Aligned_cols=16  Identities=19%  Similarity=0.270  Sum_probs=13.8

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++||+||||+++.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (200)
T 3cnh_A            4 IKALFWDIGGVLLTNG   19 (200)
T ss_dssp             CCEEEECCBTTTBCCS
T ss_pred             ceEEEEeCCCeeECCC
Confidence            4589999999999974

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=84.36  E-value=0.33  Score=41.82  Aligned_cols=16  Identities=31%  Similarity=0.196  Sum_probs=14.0

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++|||||||+++.
T Consensus        13 ~k~iifDlDGTL~d~~   28 (251)
T 2pke_A           13 IQLVGFDGDDTLWKSE   28 (251)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             eeEEEEeCCCCCccCc
Confidence            4689999999999975

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=84.09  E-value=0.34  Score=39.30  Aligned_cols=17  Identities=35%  Similarity=0.423  Sum_probs=14.1

Q ss_pred             CeEEEEeCCcceeceec
Q 021254          142 PITLVLDLDETLVHSSF  158 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~  158 (315)
                      .+.++|||||||+++..
T Consensus         4 ~k~i~fDlDGTL~~~~~   20 (207)
T 2go7_A            4 KTAFIWDLDGTLLDSYE   20 (207)
T ss_dssp             CCEEEECTBTTTEECHH
T ss_pred             ccEEEEeCCCcccccHH
Confidence            35799999999998753

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=84.06  E-value=0.3  Score=40.59  Aligned_cols=16  Identities=19%  Similarity=0.389  Sum_probs=13.7

Q ss_pred             eEEEEeCCcceeceec
Q 021254          143 ITLVLDLDETLVHSSF  158 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~  158 (315)
                      +.++|||||||+++..
T Consensus         3 k~i~fDlDGTL~d~~~   18 (221)
T 2wf7_A            3 KAVLFDLDGVITDTAE   18 (221)
T ss_dssp             CEEEECCBTTTBTHHH
T ss_pred             cEEEECCCCcccCChH
Confidence            5799999999999753

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=83.90  E-value=0.37  Score=40.35  Aligned_cols=17  Identities=29%  Similarity=0.341  Sum_probs=14.3

Q ss_pred             CeEEEEeCCcceeceec
Q 021254          142 PITLVLDLDETLVHSSF  158 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~  158 (315)
                      .+.++|||||||+++..
T Consensus         4 ik~i~fDlDGTL~d~~~   20 (229)
T 2fdr_A            4 FDLIIFDCDGVLVDSEI   20 (229)
T ss_dssp             CSEEEECSBTTTBCCHH
T ss_pred             ccEEEEcCCCCcCccHH
Confidence            46899999999999753

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=83.76  E-value=0.33  Score=41.78  Aligned_cols=16  Identities=25%  Similarity=0.474  Sum_probs=13.9

Q ss_pred             eEEEEeCCcceeceec
Q 021254          143 ITLVLDLDETLVHSSF  158 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~  158 (315)
                      +.++|||||||+++..
T Consensus         5 k~viFDlDGTL~ds~~   20 (240)
T 2hi0_A            5 KAAIFDMDGTILDTSA   20 (240)
T ss_dssp             SEEEECSBTTTEECHH
T ss_pred             cEEEEecCCCCccCHH
Confidence            5799999999999863

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=83.59  E-value=0.39  Score=39.97  Aligned_cols=16  Identities=38%  Similarity=0.515  Sum_probs=13.9

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++|||||||+++.
T Consensus         4 ~k~iifDlDGTL~d~~   19 (209)
T 2hdo_A            4 YQALMFDIDGTLTNSQ   19 (209)
T ss_dssp             CSEEEECSBTTTEECH
T ss_pred             ccEEEEcCCCCCcCCH
Confidence            3589999999999975

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=83.51  E-value=0.43  Score=40.38  Aligned_cols=17  Identities=24%  Similarity=0.286  Sum_probs=14.5

Q ss_pred             CCeEEEEeCCcceecee
Q 021254          141 LPITLVLDLDETLVHSS  157 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~  157 (315)
                      ..+.++||+||||+++.
T Consensus        22 ~~k~i~fDlDGTL~d~~   38 (247)
T 3dv9_A           22 DLKAVLFDMDGVLFDSM   38 (247)
T ss_dssp             CCCEEEEESBTTTBCCH
T ss_pred             CCCEEEECCCCccCcCH
Confidence            35689999999999975

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=83.31  E-value=0.35  Score=40.80  Aligned_cols=15  Identities=20%  Similarity=0.530  Sum_probs=13.4

Q ss_pred             eEEEEeCCcceecee
Q 021254          143 ITLVLDLDETLVHSS  157 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~  157 (315)
                      +.++|||||||+++.
T Consensus         3 k~i~fDlDGTL~d~~   17 (233)
T 3nas_A            3 KAVIFDLDGVITDTA   17 (233)
T ss_dssp             CEEEECSBTTTBCHH
T ss_pred             cEEEECCCCCcCCCH
Confidence            579999999999975

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=83.28  E-value=0.41  Score=39.42  Aligned_cols=16  Identities=25%  Similarity=0.542  Sum_probs=13.8

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++|||||||+.+.
T Consensus         4 ik~i~fDlDGTL~d~~   19 (219)
T 3kd3_A            4 MKNIIFDFDSTLIKKE   19 (219)
T ss_dssp             CEEEEECCCCCCBSSC
T ss_pred             ceEEEEeCCCCCcCcc
Confidence            4689999999999864

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=83.26  E-value=0.43  Score=39.50  Aligned_cols=16  Identities=25%  Similarity=0.515  Sum_probs=13.9

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++|||||||+.+.
T Consensus         9 ~k~i~fDlDGTL~~~~   24 (226)
T 1te2_A            9 ILAAIFDMDGLLIDSE   24 (226)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             CCEEEECCCCCcCcCH
Confidence            4689999999999875

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=83.18  E-value=0.45  Score=40.34  Aligned_cols=17  Identities=24%  Similarity=0.208  Sum_probs=14.4

Q ss_pred             CeEEEEeCCcceeceec
Q 021254          142 PITLVLDLDETLVHSSF  158 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~  158 (315)
                      .+.++||+||||+++..
T Consensus         3 ~k~viFDlDGTL~d~~~   19 (220)
T 2zg6_A            3 YKAVLVDFGNTLVGFKP   19 (220)
T ss_dssp             CCEEEECSBTTTEEEEE
T ss_pred             ceEEEEcCCCceecccc
Confidence            45899999999999863

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=82.80  E-value=0.39  Score=40.30  Aligned_cols=16  Identities=31%  Similarity=0.492  Sum_probs=13.9

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++|||||||+++.
T Consensus         7 ~k~i~fDlDGTL~d~~   22 (238)
T 3ed5_A            7 YRTLLFDVDDTILDFQ   22 (238)
T ss_dssp             CCEEEECCBTTTBCHH
T ss_pred             CCEEEEcCcCcCcCCc
Confidence            4689999999999875

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=82.60  E-value=0.031  Score=48.52  Aligned_cols=90  Identities=10%  Similarity=0.038  Sum_probs=55.3

Q ss_pred             eCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeee---eEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          183 QRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIG---QRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       183 lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~---~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      ..|++.++|+.+.+.+.+ |.|+....++...+..++... +|.   .....+.....+.   .|.+-++.+|.++++++
T Consensus       123 ~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~  200 (259)
T 2ho4_A          123 HYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGP-FVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAV  200 (259)
T ss_dssp             BHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHH-HHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEE
T ss_pred             CHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcH-HHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEE
Confidence            468999999999977888 889887665543333322221 221   1111222222222   26667788999999999


Q ss_pred             EEECCc-hhhccCCCCeee
Q 021254          257 IVDNTP-QVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp-~~~~~q~~NgI~  274 (315)
                      +|.|++ .-.......|+.
T Consensus       201 ~iGD~~~~Di~~a~~aG~~  219 (259)
T 2ho4_A          201 MIGDDCRDDVDGAQNIGML  219 (259)
T ss_dssp             EEESCTTTTHHHHHHTTCE
T ss_pred             EECCCcHHHHHHHHHCCCc
Confidence            999998 555433344443

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=82.54  E-value=0.37  Score=40.31  Aligned_cols=15  Identities=20%  Similarity=0.226  Sum_probs=13.3

Q ss_pred             eEEEEeCCcceecee
Q 021254          143 ITLVLDLDETLVHSS  157 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~  157 (315)
                      +.++|||||||+++.
T Consensus         5 k~i~fDlDGTL~d~~   19 (235)
T 2om6_A            5 KLVTFDVWNTLLDLN   19 (235)
T ss_dssp             CEEEECCBTTTBCHH
T ss_pred             eEEEEeCCCCCCCcc
Confidence            579999999999975

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=82.22  E-value=0.44  Score=42.10  Aligned_cols=19  Identities=26%  Similarity=0.356  Sum_probs=15.5

Q ss_pred             CCCeEEEEeCCcceeceec
Q 021254          140 GLPITLVLDLDETLVHSSF  158 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~  158 (315)
                      .+.+.++|||||||+++..
T Consensus        16 ~~~k~viFDlDGTLvds~~   34 (260)
T 2gfh_A           16 SRVRAVFFDLDNTLIDTAG   34 (260)
T ss_dssp             CCCCEEEECCBTTTBCHHH
T ss_pred             ccceEEEEcCCCCCCCCHH
Confidence            3456899999999999863

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=82.16  E-value=0.45  Score=41.21  Aligned_cols=16  Identities=13%  Similarity=0.077  Sum_probs=13.8

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++|||||||+++.
T Consensus         6 ik~i~fDlDGTLld~~   21 (267)
T 1swv_A            6 IEAVIFAWAGTTVDYG   21 (267)
T ss_dssp             CCEEEECSBTTTBSTT
T ss_pred             ceEEEEecCCCEEeCC
Confidence            4589999999999974

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=81.95  E-value=3  Score=37.50  Aligned_cols=96  Identities=15%  Similarity=0.169  Sum_probs=63.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCC---eeeeEEEecceeee---CC----ccccc-----
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQT---LIGQRVYRDSCVFA---DG----EYLKD-----  244 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~---~f~~rl~Re~C~~~---~g----~y~KD-----  244 (315)
                      +.+|||+.+|++.|. ..+.++|.|.+....++++++.+.....   .+...+..++-...   .+    .+.|.     
T Consensus       140 i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~k  219 (297)
T 4fe3_A          140 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALK  219 (297)
T ss_dssp             CCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHT
T ss_pred             CCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHHH
Confidence            789999999999999 5799999999999999999999875421   23333322221111   11    01111     


Q ss_pred             ---ccccCCCCCcEEEEECCchhhcc-----CCCCeeeec
Q 021254          245 ---LTILGRDLARIAIVDNTPQVFQL-----QVDNGIPIE  276 (315)
Q Consensus       245 ---L~~Lgrdl~~vIIIDDsp~~~~~-----q~~NgI~I~  276 (315)
                         ...+.....+|++|=|...-...     +.++||.|-
T Consensus       220 ~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiG  259 (297)
T 4fe3_A          220 NTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIG  259 (297)
T ss_dssp             CHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEE
T ss_pred             HHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEE
Confidence               11223455789999998876543     567777664

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=81.69  E-value=0.53  Score=40.19  Aligned_cols=17  Identities=24%  Similarity=0.339  Sum_probs=14.7

Q ss_pred             CCeEEEEeCCcceecee
Q 021254          141 LPITLVLDLDETLVHSS  157 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~  157 (315)
                      ..+.++|||||||+++.
T Consensus        23 ~~k~i~fDlDGTL~d~~   39 (243)
T 3qxg_A           23 KLKAVLFDMDGVLFNSM   39 (243)
T ss_dssp             CCCEEEECSBTTTBCCH
T ss_pred             cCCEEEEcCCCCCCCCH
Confidence            45789999999999875

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=81.66  E-value=0.41  Score=40.93  Aligned_cols=15  Identities=47%  Similarity=0.731  Sum_probs=13.4

Q ss_pred             eEEEEeCCcceecee
Q 021254          143 ITLVLDLDETLVHSS  157 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~  157 (315)
                      +.++|||||||+++.
T Consensus         3 k~iiFDlDGTL~d~~   17 (241)
T 2hoq_A            3 KVIFFDLDDTLVDTS   17 (241)
T ss_dssp             CEEEECSBTTTBCHH
T ss_pred             cEEEEcCCCCCCCCh
Confidence            479999999999975

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=81.17  E-value=0.43  Score=39.89  Aligned_cols=16  Identities=25%  Similarity=0.152  Sum_probs=14.0

Q ss_pred             CeEEEEeCCcceecee
Q 021254          142 PITLVLDLDETLVHSS  157 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~  157 (315)
                      .+.++||+||||+++.
T Consensus         6 ~k~i~fD~DGTL~d~~   21 (240)
T 3smv_A            6 FKALTFDCYGTLIDWE   21 (240)
T ss_dssp             CSEEEECCBTTTBCHH
T ss_pred             ceEEEEeCCCcCcCCc
Confidence            4689999999999975

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=80.66  E-value=0.51  Score=39.57  Aligned_cols=15  Identities=33%  Similarity=0.521  Sum_probs=13.5

Q ss_pred             eEEEEeCCcceecee
Q 021254          143 ITLVLDLDETLVHSS  157 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~  157 (315)
                      +.++||+||||+++.
T Consensus         3 k~i~fDlDGTL~~~~   17 (230)
T 3vay_A            3 KLVTFDLDDTLWDTA   17 (230)
T ss_dssp             CEEEECCBTTTBCSH
T ss_pred             eEEEecCcccCcCCc
Confidence            579999999999985

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=80.48  E-value=0.5  Score=39.96  Aligned_cols=17  Identities=18%  Similarity=0.036  Sum_probs=14.5

Q ss_pred             CCeEEEEeCCcceecee
Q 021254          141 LPITLVLDLDETLVHSS  157 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~  157 (315)
                      ..+.++|||||||+++.
T Consensus        14 ~~k~i~fDlDGTL~d~~   30 (254)
T 3umg_A           14 NVRAVLFDTFGTVVDWR   30 (254)
T ss_dssp             BCCEEEECCBTTTBCHH
T ss_pred             CceEEEEeCCCceecCc
Confidence            35689999999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	315
d1ta0a_	181	c.108.1.16 (A:) Carboxy-terminal domain RNA polyme	2e-56

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 181

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (453), Expect = 2e-56
 Identities = 75/189 (39%), Positives = 109/189 (57%), Gaps = 12/189 (6%)

Query: 121 LPQIAPSYWPRTPLREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVF 180
           LP+       +           I +V+DLDETLVHSSF    +ADF  P+     V  V+
Sbjct: 5   LPEAKAQDSDK-----------ICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVY 53

Query: 181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE 240
           V +RP++  FL+ +  +F+ V+FTA  + YA  + D+LD        R++R+SCVF  G 
Sbjct: 54  VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWG-AFRARLFRESCVFHRGN 112

Query: 241 YLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMFLETLVGA 300
           Y+KDL+ LGRDL R+ I+DN+P  +    DN +P+ SWF + SD+ L  LL F E L   
Sbjct: 113 YVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRV 172

Query: 301 DDVRPIIKQ 309
           DDV  +++Q
Sbjct: 173 DDVYSVLRQ 181

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	315
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.06
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	98.77
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	98.76
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	98.71
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.66
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	98.62
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	98.61
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	98.5
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	98.41
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	98.37
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	98.3
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	98.3
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	98.28
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.19
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.15
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.1
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	98.09
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	98.02
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	97.99
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.93
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	97.91
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.75
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.67
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.34
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.33
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	97.17
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	97.09
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	96.98
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	96.77
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	96.68
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.6
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	96.37
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	96.36
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	96.21
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	96.12
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	96.06
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	96.05
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.02
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	95.97
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	95.72
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	95.72
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	95.65
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	95.35
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	95.29
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	94.72
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	94.7
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	94.63
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	93.69
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	91.93
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	91.13
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	90.56

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-49  Score=345.30  Aligned_cols=175  Identities=42%  Similarity=0.732  Sum_probs=167.2

Q ss_pred             CCCCCCCCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHH
Q 021254          134 LREPIAGLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQ  213 (315)
Q Consensus       134 P~~~~~~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~  213 (315)
                      |..+..++|+|||||||||||||+..+....++.+.+...+....+||++|||+++||++|+++|||+|||||++.||++
T Consensus         7 ~~~~~~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~   86 (181)
T d1ta0a_           7 EAKAQDSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADP   86 (181)
T ss_dssp             CCCGGGTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHHH
T ss_pred             CCCcccCCCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhceEEEEEcCCcHHHHHH
Confidence            34455688999999999999999998888899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCChHHHHHHHH
Q 021254          214 LLDILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLSLLMF  293 (315)
Q Consensus       214 vL~~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~eLl~L~~~  293 (315)
                      |++.|||++ .|.+++||++|...++.++|||+.+|+++++||||||++.+|..||+|||+|++|+|+++|++|+.|++|
T Consensus        87 il~~ldp~~-~~~~~~~r~~c~~~~~~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~I~~f~~~~~D~eL~~l~~~  165 (181)
T d1ta0a_          87 VADLLDKWG-AFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPF  165 (181)
T ss_dssp             HHHHHCSSC-CEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCCCCCCSSCTTCCHHHHHHHH
T ss_pred             HHHHhccCC-ceeEEEEeeeeeecCCcccccHhhcCCCHHHeEEEcCChhhhhcCccCeeEecCcCCCCCcHHHHHHHHH
Confidence            999999987 6889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccCCCChHHHHHh
Q 021254          294 LETLVGADDVRPIIKQ  309 (315)
Q Consensus       294 L~~L~~~~DVR~~l~~  309 (315)
                      |+.|+.++|||++|++
T Consensus       166 L~~l~~~~DVR~~l~~  181 (181)
T d1ta0a_         166 FEQLSRVDDVYSVLRQ  181 (181)
T ss_dssp             HHHHTTCSCHHHHHCC
T ss_pred             HHHHccCCcHHHHhcC
Confidence            9999999999999985

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=1.1e-10  Score=97.19  Aligned_cols=150  Identities=19%  Similarity=0.107  Sum_probs=99.2

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCee---eeeeEeeCchHHHHHHHhh-cccEEEEEcCCc-hhhHHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEV---QTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ-SIYAGQLLD  216 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~---~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~-~~YA~~vL~  216 (315)
                      ++++||||||||+++.........+.  ....+..   ....+.+.||+.++|++|. +.+.++|.|++. ..++..+++
T Consensus         5 pK~viFDlDGTL~d~~~~~~~~~~~~--~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~   82 (164)
T d1u7pa_           5 PKLAVFDLDYTLWPFWVDTHVDPPFH--KSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLE   82 (164)
T ss_dssp             CSEEEECCBTTTBSSCTTTTCCSCEE--ECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHH
T ss_pred             CCEEEEcCCCcccCCccccccCccHh--HHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchh
Confidence            46799999999998754322222211  1111111   2223788999999999999 569999999765 578888999


Q ss_pred             HhCCCCCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCCCChHHHH-HHHHHh
Q 021254          217 ILDPNQTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDPSDSALLS-LLMFLE  295 (315)
Q Consensus       217 ~LDp~~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~~D~eLl~-L~~~L~  295 (315)
                      .+.... +|........  .....+.+-++.+|.+++++|+|||++.........|+..........-.++.+ +-.|-+
T Consensus        83 ~~~~~~-~~~~~~~~~k--p~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~~~~~l~~f~~  159 (164)
T d1u7pa_          83 LFDLGK-YFIQREIYPG--SKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAK  159 (164)
T ss_dssp             HTTCGG-GCSEEEESSS--CHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCCCHHHHHHHHHHHHH
T ss_pred             cccccc-cceeeecccC--CChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence            988765 5655432211  111246677788899999999999999988777778887765543334444443 344433


Q ss_pred             h
Q 021254          296 T  296 (315)
Q Consensus       296 ~  296 (315)
                      .
T Consensus       160 ~  160 (164)
T d1u7pa_         160 A  160 (164)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=98.77  E-value=7.7e-10  Score=93.89  Aligned_cols=96  Identities=10%  Similarity=0.037  Sum_probs=80.8

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +...||+.++|++|+ +.+.++|.|++.+.++..+++.++..+ +|...++.++-...+.   .|.+-++.+|.++++++
T Consensus        87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~-~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  165 (218)
T d1te2a_          87 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV  165 (218)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             ccccchHHHHHHHhhhccccccccccccccccccccccccccc-cccccccccccccchhhHHHHHHHHHHcCCCchhcE
Confidence            346799999999998 679999999999999999999999975 8999998877555443   37788889999999999


Q ss_pred             EEECCchhhccCCCCeeeecc
Q 021254          257 IVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~  277 (315)
                      +|+|++.-.......|+..-.
T Consensus       166 ~igD~~~di~aA~~~G~~~i~  186 (218)
T d1te2a_         166 ALEDSVNGMIASKAARMRSIV  186 (218)
T ss_dssp             EEESSHHHHHHHHHTTCEEEE
T ss_pred             EEeeCHHHHHHHHHcCCEEEE
Confidence            999999877666666766543

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.76  E-value=4.4e-10  Score=94.85  Aligned_cols=94  Identities=14%  Similarity=0.027  Sum_probs=76.1

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +.+.||+.++|+.++ +.+.++|.|++.. ++..+++.++..+ +|+.++..+.....+.   .|..-++.+|.++++|+
T Consensus        81 ~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~-~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l  158 (204)
T d2go7a1          81 VVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVES-YFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY  158 (204)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGG-GEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CcccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccc-ccccccccccccccchhHHHHHHHHHHhCCCCceEE
Confidence            567899999999999 5699999998765 7788999999886 8998888776555443   36777888899999999


Q ss_pred             EEECCchhhccCCCCeeeec
Q 021254          257 IVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~  276 (315)
                      +|+|++.-.......|++.-
T Consensus       159 ~VgD~~~Di~~A~~~G~~~i  178 (204)
T d2go7a1         159 YIGDRTLDVEFAQNSGIQSI  178 (204)
T ss_dssp             EEESSHHHHHHHHHHTCEEE
T ss_pred             EEeCCHHHHHHHHHcCCeEE
Confidence            99999987766666666543

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=98.71  E-value=3.8e-10  Score=95.64  Aligned_cols=94  Identities=10%  Similarity=0.019  Sum_probs=79.0

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      +...||+.++|+++++.+.++|.|++....+..+++.++..+ +|...+..++....++   .|.+-++.+|.+++++|+
T Consensus        81 ~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  159 (207)
T d2hdoa1          81 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMM-RMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  159 (207)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGG-GEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             cccccchhhhhhhhcccccccccccccccccccccccccccc-cccccccccccccchhhhhhhcccccceeeeccceeE
Confidence            567899999999999889999999999999999999998875 8998888877665554   367778889999999999


Q ss_pred             EECCchhhccCCCCeeee
Q 021254          258 VDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I  275 (315)
                      |+|++.-.......|+..
T Consensus       160 VgDs~~Di~~a~~aG~~~  177 (207)
T d2hdoa1         160 IGDSVSDEQTAQAANVDF  177 (207)
T ss_dssp             EESSHHHHHHHHHHTCEE
T ss_pred             ecCCHHHHHHHHHcCCeE
Confidence            999998765555556654

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.66  E-value=1.8e-09  Score=87.16  Aligned_cols=128  Identities=13%  Similarity=0.043  Sum_probs=79.8

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      .+++++|||+||||+++......  ++.      ..   .-....|++.++|+.+. +.|+|++.|+....++...++.|
T Consensus         5 ~kpk~vifDiDgTL~~~~~~~~~--~~~------~~---~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l   73 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGRGPY--DLE------KC---DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY   73 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSCCTT--CGG------GG---GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH
T ss_pred             CCCcEEEEEcCCCcEeCCCCCcC--Ccc------cc---ccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH
Confidence            56789999999999987543211  110      00   01235799999999999 58999999998877665555554


Q ss_pred             CC--------CCCeeeeEEEecceeeeCCc-c-cccccccCCCCCcE-EEEECCchhhccCCCCeeeeccc
Q 021254          219 DP--------NQTLIGQRVYRDSCVFADGE-Y-LKDLTILGRDLARI-AIVDNTPQVFQLQVDNGIPIESW  278 (315)
Q Consensus       219 Dp--------~~~~f~~rl~Re~C~~~~g~-y-~KDL~~Lgrdl~~v-IIIDDsp~~~~~q~~NgI~I~~f  278 (315)
                      ..        .+..+.....+..+...... + ..-|..+..+..++ ++|||++........+||++-..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V  144 (149)
T d1ltqa1          74 RMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQV  144 (149)
T ss_dssp             HHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred             HHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEe
Confidence            32        12223333444443322211 1 11223345555565 56799999888777889887544

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.62  E-value=2e-09  Score=90.76  Aligned_cols=97  Identities=13%  Similarity=0.054  Sum_probs=78.7

Q ss_pred             eEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeC-CcccccccccCCCCCcEEEE
Q 021254          180 FVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFAD-GEYLKDLTILGRDLARIAIV  258 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~-g~y~KDL~~Lgrdl~~vIII  258 (315)
                      .....||+.++|+.+++.+.++|.|++...++..+++.++... +|..++..+.....+ ..+.+-+..+|.+++++++|
T Consensus        82 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~-~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~V  160 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             SCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             cccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhcccc-cccccccccccccccccccchhhhhhhcccccceee
Confidence            4678999999999999999999999999999999999999886 898888765533222 13566778889999999999


Q ss_pred             ECCchhhccCCCCeeeecc
Q 021254          259 DNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       259 DDsp~~~~~q~~NgI~I~~  277 (315)
                      .|++.-.......|++.-.
T Consensus       161 GDs~~Di~aa~~aGi~~i~  179 (210)
T d2ah5a1         161 GDTKFDMLGARETGIQKLA  179 (210)
T ss_dssp             ESSHHHHHHHHHHTCEEEE
T ss_pred             cCCHHHHHHHHHcCCeEEE
Confidence            9998877666666765443

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=98.61  E-value=3.1e-09  Score=89.68  Aligned_cols=94  Identities=14%  Similarity=0.102  Sum_probs=77.5

Q ss_pred             eEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcE
Q 021254          180 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARI  255 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~v  255 (315)
                      ..++.||+.++|++|+ ..+.++|.|++.+.+++.+++.++..+ +|..++..+.....+.   .|..-++.+|.+++++
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~  171 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQI  171 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             ccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchh-hccccccccccccccccchhhHHHHHHhhhhhhcc
Confidence            3667899999999999 569999999999999999999999875 8998888766544443   3667778889999999


Q ss_pred             EEEECCchhhccCCCCeee
Q 021254          256 AIVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~  274 (315)
                      ++|+|++..+......|+.
T Consensus       172 ~~igD~~~Di~~A~~aG~~  190 (224)
T d2hsza1         172 LFVGDSQNDIFAAHSAGCA  190 (224)
T ss_dssp             EEEESSHHHHHHHHHHTCE
T ss_pred             chhcCcHHHHHHHHHcCCe
Confidence            9999999877555555554

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.50  E-value=3.5e-08  Score=84.23  Aligned_cols=95  Identities=12%  Similarity=0.077  Sum_probs=74.1

Q ss_pred             EeeCchHHHHHHHhhc--ccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---cc---ccccccCCCC
Q 021254          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YL---KDLTILGRDL  252 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~--~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~---KDL~~Lgrdl  252 (315)
                      +..-||+.++|++|++  .+.++|.|++....+..+++.++... +|+..++.++....++.   +.   +.+...|.++
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p  168 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPFGAFADDALDRNELPHIALERARRMTGANYSP  168 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc-cccccccccccccccchhHHHHHHhhhhcccCCCh
Confidence            4567999999999985  38899999999999999999999986 89988887764443332   22   2233337889


Q ss_pred             CcEEEEECCchhhccCCCCeeeec
Q 021254          253 ARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       253 ~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      +++|+|.|++.-.......|+..-
T Consensus       169 ~~~l~VGD~~~Di~aA~~aG~~~i  192 (228)
T d2hcfa1         169 SQIVIIGDTEHDIRCARELDARSI  192 (228)
T ss_dssp             GGEEEEESSHHHHHHHHTTTCEEE
T ss_pred             hHheeecCChHHHHHHHHcCCEEE
Confidence            999999999987776677787653

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.41  E-value=1.5e-08  Score=84.83  Aligned_cols=96  Identities=8%  Similarity=-0.028  Sum_probs=73.3

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vI  256 (315)
                      ..+.||+.++|++++ +.+.++|.|++.+ .+..+++.++... +|+..+..++....++.   |..-++.+|.  +.+|
T Consensus        78 ~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l  153 (187)
T d2fi1a1          78 PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAA-YFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGL  153 (187)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGG-GEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEE
T ss_pred             CcccchhHHHHHHHHhhhccccccccCcc-chhhhhhhhcccc-ccccccccccccccCCCHHHHHHHHHHcCC--CCeE
Confidence            456799999999998 5699999998765 5556899999875 89998887765554432   5555666664  5699


Q ss_pred             EEECCchhhccCCCCeeeeccccC
Q 021254          257 IVDNTPQVFQLQVDNGIPIESWFG  280 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~I~~f~~  280 (315)
                      +|+|++.-.......|+...-+.+
T Consensus       154 ~vgDs~~Di~aA~~aG~~~i~v~~  177 (187)
T d2fi1a1         154 VIGDRPIDIEAGQAAGLDTHLFTS  177 (187)
T ss_dssp             EEESSHHHHHHHHHTTCEEEECSC
T ss_pred             EEeCCHHHHHHHHHcCCEEEEECC
Confidence            999999887766778887655543

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=98.37  E-value=2.2e-08  Score=84.39  Aligned_cols=93  Identities=13%  Similarity=0.046  Sum_probs=79.4

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      ....|++.++|+.+. +.+.++|.|++...++..++....... +|..+++.+++...+.   .|.+-++.+|.++++++
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~-~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l  170 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL  170 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc-cccceeeeeeeeccccHHHHHHHHHHHhCCCCceEE
Confidence            557899999999997 679999999999999999999988875 8999999888777665   47888999999999999


Q ss_pred             EEECCchhhccCCCCeee
Q 021254          257 IVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~  274 (315)
                      +|+|++.-.......|+.
T Consensus       171 ~VgD~~~Di~~A~~aG~~  188 (220)
T d1zrna_         171 FVASNAWDATGARYFGFP  188 (220)
T ss_dssp             EEESCHHHHHHHHHHTCC
T ss_pred             EEecChHhHHHHHHcCCE
Confidence            999999766555555655

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.30  E-value=1.3e-08  Score=86.37  Aligned_cols=96  Identities=11%  Similarity=0.150  Sum_probs=75.5

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecce-e--eeC---CcccccccccCCCCCc
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSC-V--FAD---GEYLKDLTILGRDLAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C-~--~~~---g~y~KDL~~Lgrdl~~  254 (315)
                      +...||+.++|+++...  .+|.|++...++..+++.++... +|...++.... .  ..+   ..|.+-+..+|.++++
T Consensus        84 ~~~~~g~~~~L~~l~~~--~~i~t~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~  160 (222)
T d2fdra1          84 VKIIDGVKFALSRLTTP--RCICSNSSSHRLDMMLTKVGLKP-YFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR  160 (222)
T ss_dssp             CCBCTTHHHHHHHCCSC--EEEEESSCHHHHHHHHHHTTCGG-GTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             cchhhhHHHHhhhcccc--ceeeeecchhhhhhhhccccccc-ccceeecccccccccccccCHHHHHHHHHhhCCCCce
Confidence            66789999999999853  46889999999999999999986 78766653221 1  112   2478888899999999


Q ss_pred             EEEEECCchhhccCCCCeeeecccc
Q 021254          255 IAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      +|+|+|++.-.......|+..-.+.
T Consensus       161 ~l~vgDs~~dv~aA~~aG~~~i~v~  185 (222)
T d2fdra1         161 VVVVEDSVHGIHGARAAGMRVIGFT  185 (222)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHcCCEEEEEc
Confidence            9999999998877777787765554

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.30  E-value=1.5e-07  Score=79.10  Aligned_cols=95  Identities=13%  Similarity=-0.001  Sum_probs=74.3

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCC----chhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCC
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAG----QSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDL  252 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas----~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl  252 (315)
                      +..+|++.++|.+++ +.+.++|.|++    ...+...++...+..+ ||+.+++.+.+...+..   |.+-++.+|.++
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~-~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p  174 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQ-HFDFLIESCQVGMIKPEPQIYNFLLDTLKAKP  174 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGG-GCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCT
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHh-hhceeeehhhccCCCCChHHHHHHHHHhCCCc
Confidence            567899999999998 56999999964    4445566666666655 89999998776665543   788888999999


Q ss_pred             CcEEEEECCchhhccCCCCeeeec
Q 021254          253 ARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       253 ~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      +++|+|+|+..-.......|+...
T Consensus       175 ~~~l~IgD~~~Di~~A~~aG~~ti  198 (222)
T d1cr6a1         175 NEVVFLDDFGSNLKPARDMGMVTI  198 (222)
T ss_dssp             TSEEEEESSSTTTHHHHHHTCEEE
T ss_pred             ceEEEEECCHHHHHHHHHcCCEEE
Confidence            999999999877766666666533

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=98.28  E-value=5.8e-08  Score=82.09  Aligned_cols=91  Identities=10%  Similarity=0.097  Sum_probs=72.4

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIA  256 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vI  256 (315)
                      +..-||+.++|+.++ ..+.+++.|++  ..+..+++.++..+ +|..+++.+.....+.   .|.+-++.+|.+++++|
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~--~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l  166 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI  166 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHTTCGG-GCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             ccccCCceeccccccccccceEEEeec--chhhHHHHhhcccc-ccccccccccccccccChHHHHHHHHHcCCCCceEE
Confidence            456799999999999 56888888875  56889999998876 8998888777655543   37888999999999999


Q ss_pred             EEECCchhhccCCCCeee
Q 021254          257 IVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       257 IIDDsp~~~~~q~~NgI~  274 (315)
                      +|+|++.........|+.
T Consensus       167 ~VgD~~~di~~A~~aG~~  184 (221)
T d1o08a_         167 GLEDSQAGIQAIKDSGAL  184 (221)
T ss_dssp             EEESSHHHHHHHHHHTCE
T ss_pred             EEecCHHHHHHHHHcCCE
Confidence            999999766544444543

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.19  E-value=1.8e-06  Score=71.85  Aligned_cols=121  Identities=17%  Similarity=0.171  Sum_probs=74.0

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCch--------h---
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQS--------I---  209 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~--------~---  209 (315)
                      ++.++||.||||+......     +  .+.  ..   -.+.+-||+.+.|+.|. +.|.++|+|....        .   
T Consensus         2 ~K~i~~D~DGtL~~~~~~~-----~--~~~--~~---~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~   69 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSD-----F--QVD--RF---DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFD   69 (161)
T ss_dssp             CEEEEECCBTTTBCCC--C-----C--CCC--SG---GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHH
T ss_pred             CcEEEEeCCCCeEeeCCCC-----C--ccC--CH---HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhh
Confidence            6889999999999743210     0  000  00   12457899999999999 5799999998541        1   


Q ss_pred             -hHHHHHHHhCCCCCeeeeEEEe-----cceeeeC---CcccccccccCCCCCcEEEEECCchhhccCCCCeee
Q 021254          210 -YAGQLLDILDPNQTLIGQRVYR-----DSCVFAD---GEYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGIP  274 (315)
Q Consensus       210 -YA~~vL~~LDp~~~~f~~rl~R-----e~C~~~~---g~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~  274 (315)
                       .-..+.+.+...+..+...++.     +.|...+   +.+..-+..+|.+++++++|-|+..-.......|+.
T Consensus        70 ~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~  143 (161)
T d2fpwa1          70 GPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGIN  143 (161)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSE
T ss_pred             hhhhhhhhhccccccccceeeeccccccccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCe
Confidence             1122334444444334444443     4455544   347788888899999999999998765444444444

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.15  E-value=6.1e-07  Score=76.02  Aligned_cols=95  Identities=9%  Similarity=0.104  Sum_probs=67.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEec-ceeee-------------CCc-cccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRD-SCVFA-------------DGE-YLKD  244 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re-~C~~~-------------~g~-y~KD  244 (315)
                      +.++||+.++|+.+. +.+.++|.|++...+++.+++.+++...++...+.-+ .-...             ++. ..+-
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  153 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV  153 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence            678999999999997 6799999999999999999999987654434333211 10000             001 1233


Q ss_pred             ccccCCCCCcEEEEECCchhhccCCCCeeee
Q 021254          245 LTILGRDLARIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       245 L~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      +..++.++++|+.|-|+..-.......++.+
T Consensus       154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~  184 (226)
T d2feaa1         154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCF  184 (226)
T ss_dssp             HHHHCCTTCEEEEEECCGGGHHHHHTCSEEE
T ss_pred             HHHhcCCCceEEEEeCchhhHHHHHHCCEEE
Confidence            5567899999999999998765555555544

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.10  E-value=1.7e-06  Score=74.95  Aligned_cols=143  Identities=20%  Similarity=0.150  Sum_probs=87.9

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc------------h
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ------------S  208 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~------------~  208 (315)
                      .+.|.||+||||++...- ...            ..  -+++-||+.+.|++|. +.|.++|.|+..            .
T Consensus        23 ~~Aif~DrDGtl~~~~~y-~~~------------~~--~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~   87 (209)
T d2o2xa1          23 LPALFLDRDGTINVDTDY-PSD------------PA--EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFA   87 (209)
T ss_dssp             CCCEEECSBTTTBCCCSC-TTC------------GG--GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHH
T ss_pred             CCEEEEeCCCCeECCCCC-CCC------------HH--HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhh
Confidence            357899999999875321 000            00  1346799999999999 479999999733            2


Q ss_pred             hhHHHHHHHhCCCCCeeeeEEEec------------ceeeeCC---cccccccccCCCCCcEEEEECCchhhccCCCCee
Q 021254          209 IYAGQLLDILDPNQTLIGQRVYRD------------SCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQLQVDNGI  273 (315)
Q Consensus       209 ~YA~~vL~~LDp~~~~f~~rl~Re------------~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~q~~NgI  273 (315)
                      ...+.+.+.+...+-.+...++..            +|.+.+.   .+.+-+..+|.+++++++|-|+..-.......|+
T Consensus        88 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi  167 (209)
T d2o2xa1          88 AVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGL  167 (209)
T ss_dssp             HHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTC
T ss_pred             hhhhHHHHHhhhcccccceEEEecccccccccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCC
Confidence            233445555555554455555432            3444443   3667778889999999999999875543333333


Q ss_pred             ---eeccccCC----------CCChHHHHHHHHHhhccC
Q 021254          274 ---PIESWFGD----------PSDSALLSLLMFLETLVG  299 (315)
Q Consensus       274 ---~I~~f~~d----------~~D~eLl~L~~~L~~L~~  299 (315)
                         .+...++.          .+-.++.+|+..++.|..
T Consensus       168 ~~i~v~~g~~~~~~~~~~~~~~~~~e~~dll~~v~~l~~  206 (209)
T d2o2xa1         168 AQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIETLGR  206 (209)
T ss_dssp             SEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHHHTCC
T ss_pred             cEEEEeCCCCcccCCccccCccchhHHHHHHHHHHHHHH
Confidence               22222211          223456667776666654

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.09  E-value=1.3e-06  Score=74.42  Aligned_cols=95  Identities=16%  Similarity=0.138  Sum_probs=79.1

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      ...+||+.++|++|++.|.++|.|++...++..+++.++..+ +|+.+++.+++...+..   |.+-+..+|.+++++++
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~  177 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKD-LFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGG-GCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhccccccc-ccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence            567899999999999899999999999999999999999875 89999988776665543   77888899999999999


Q ss_pred             EECCchh-hccCCCCeeeec
Q 021254          258 VDNTPQV-FQLQVDNGIPIE  276 (315)
Q Consensus       258 IDDsp~~-~~~q~~NgI~I~  276 (315)
                      |+|++.. .......|+...
T Consensus       178 vgD~~~~Di~~A~~~G~~~v  197 (230)
T d1x42a1         178 VGDNPVKDCGGSKNLGMTSI  197 (230)
T ss_dssp             EESCTTTTHHHHHTTTCEEE
T ss_pred             eecCcHhHHHHHHHcCCEEE
Confidence            9998753 544445666543

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=4e-08  Score=79.69  Aligned_cols=96  Identities=15%  Similarity=0.147  Sum_probs=75.7

Q ss_pred             eeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh-CCCCCeeeeEEEecceeeeCCc---ccccccccCCCCC
Q 021254          179 VFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL-DPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLA  253 (315)
Q Consensus       179 ~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L-Dp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~  253 (315)
                      .+...+|++.+++..+. +.+.+++.|++....+...+..+ +... +|...++.++....+..   |..-++.+|.+++
T Consensus        81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~-~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~  159 (197)
T d2b0ca1          81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD-AADHIYLSQDLGMRKPEARIYQHVLQAEGFSPS  159 (197)
T ss_dssp             CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH-HCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             hccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchh-hccceeecccccccccchHHHHHHHHhcCCCCC
Confidence            45788999999999998 78999999999888877766654 4443 78888887765555543   6777888999999


Q ss_pred             cEEEEECCchhhccCCCCeeee
Q 021254          254 RIAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      ++|+|+|++.........|+..
T Consensus       160 ~~l~vgDs~~di~~A~~aG~~t  181 (197)
T d2b0ca1         160 DTVFFDDNADNIEGANQLGITS  181 (197)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEE
T ss_pred             eEEEEeCCHHHHHHHHHcCCEE
Confidence            9999999998776666777644

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=3.5e-07  Score=75.81  Aligned_cols=98  Identities=9%  Similarity=-0.061  Sum_probs=73.7

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHH----HhCCCCCeeeeEEEecceeeeCC---cccccccccCCCC
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLD----ILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDL  252 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~----~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl  252 (315)
                      ...+|++.++|+.+. +.+.++|-|++....+...+.    ..+.. .+|+.+++.+++...+.   .|.+-++.+|.++
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p  176 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK-MHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP  176 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH-TTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChH-hhccEEEeccccccchhHHHHHHHHhhhcccCc
Confidence            567999999999998 679999999876554443332    22322 37888988777666665   3788888999999


Q ss_pred             CcEEEEECCchhhccCCCCeeeecccc
Q 021254          253 ARIAIVDNTPQVFQLQVDNGIPIESWF  279 (315)
Q Consensus       253 ~~vIIIDDsp~~~~~q~~NgI~I~~f~  279 (315)
                      +++|+|+|++.........|+..--+.
T Consensus       177 ~e~l~VgD~~~Di~~A~~~G~~ti~v~  203 (225)
T d1zd3a1         177 SEVVFLDDIGANLKPARDLGMVTILVQ  203 (225)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred             cceeEEecCHHHHHHHHHcCCEEEEEC
Confidence            999999999887766667777654443

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.93  E-value=9.5e-06  Score=64.92  Aligned_cols=96  Identities=13%  Similarity=0.171  Sum_probs=63.3

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +++++|+||||++.....                   +..-.|++-++|+.|. +.+.|+||||-...+....++.|...
T Consensus         1 mti~vDiDGTl~~~~~~~-------------------~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~   61 (122)
T d2obba1           1 MTIAVDFDGTIVEHRYPR-------------------IGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRAR   61 (122)
T ss_dssp             CEEEECCBTTTBCSCTTS-------------------CCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             CEEEEEcCCCcCCCCCCc-------------------cccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHc
Confidence            479999999998643210                   1124789999999997 78999999999999998888888877


Q ss_pred             CCeeeeEEEecceeeeCCcccccccccCCCCCcEEEEECCch
Q 021254          222 QTLIGQRVYRDSCVFADGEYLKDLTILGRDLARIAIVDNTPQ  263 (315)
Q Consensus       222 ~~~f~~rl~Re~C~~~~g~y~KDL~~Lgrdl~~vIIIDDsp~  263 (315)
                      +-.|.......      +...+.=....+.+.--++|||...
T Consensus        62 ~i~yd~i~~~~------~~~~~~~~~~~~Kp~ad~yIDDKai   97 (122)
T d2obba1          62 GLEFYAANKDY------PEEERDHQGFSRKLKADLFIDDRNV   97 (122)
T ss_dssp             TCCCSEESSSS------TTC---CCSCCSSCCCSEEECTTST
T ss_pred             CCCceehhccC------ccCccccceecCCccccEEEeCCcc
Confidence            64443221111      1111222223334445589999653

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=3e-06  Score=72.36  Aligned_cols=98  Identities=11%  Similarity=0.159  Sum_probs=80.7

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC---cccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG---EYLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g---~y~KDL~~Lgrdl~~vII  257 (315)
                      ....|++.++|++|++.+.++|.|++....+..+++..+... +|+++++.++....+.   .|.+-++.+|.+++++++
T Consensus       108 ~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  186 (247)
T d2gfha1         108 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVM  186 (247)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCccHHHHHHHhhcccceEEeecccchhhhhhhhhccccc-cccccccccccccchhhhhhHHHHHHHhhcCHHhcce
Confidence            356799999999999999999999999999999999998865 8999998887766554   377888889999999999


Q ss_pred             EECCchh-hccCCCCeeeecccc
Q 021254          258 VDNTPQV-FQLQVDNGIPIESWF  279 (315)
Q Consensus       258 IDDsp~~-~~~q~~NgI~I~~f~  279 (315)
                      |.|++.. .......|+...-|.
T Consensus       187 iGD~~~~Di~~A~~~G~~~~~~~  209 (247)
T d2gfha1         187 VGDTLETDIQGGLNAGLKATVWI  209 (247)
T ss_dssp             EESCTTTHHHHHHHTTCSEEEEE
T ss_pred             eccChHhHHHHHHHcCCeEEEEE
Confidence            9999753 555556777643443

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=9.5e-06  Score=67.77  Aligned_cols=110  Identities=18%  Similarity=0.132  Sum_probs=69.4

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchh--------hHHH
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSI--------YAGQ  213 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~--------YA~~  213 (315)
                      +.|+||+||||+.-..       +..      ....  +++-||+.+.|++|. +.|.++|.|+....        ....
T Consensus         3 ~Av~~DrDGtl~~~~~-------y~~------~~~~--~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~   67 (182)
T d2gmwa1           3 PAIFLDRDGTINVDHG-------YVH------EIDN--FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFET   67 (182)
T ss_dssp             CEEEECSBTTTBCCCS-------SCC------SGGG--CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHH
T ss_pred             CEEEEeCCCCccCCCC-------CCC------CHHH--eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhh
Confidence            4799999999986321       100      0001  335699999999999 57999999987531        1111


Q ss_pred             H----HHHhCCCCCeeeeEEE------------ecceeeeCC---cccccccccCCCCCcEEEEECCchhhcc
Q 021254          214 L----LDILDPNQTLIGQRVY------------RDSCVFADG---EYLKDLTILGRDLARIAIVDNTPQVFQL  267 (315)
Q Consensus       214 v----L~~LDp~~~~f~~rl~------------Re~C~~~~g---~y~KDL~~Lgrdl~~vIIIDDsp~~~~~  267 (315)
                      +    ...+...+..+....+            ++.|.+.+.   .+.+-++.++.+++++++|=|+..-...
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~a  140 (182)
T d2gmwa1          68 LTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQA  140 (182)
T ss_dssp             HHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHH
T ss_pred             hhhhhhhhhhhhcccccceeecccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHHHH
Confidence            1    1112111212333333            344655553   4678888899999999999999876543

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=4e-05  Score=65.38  Aligned_cols=100  Identities=11%  Similarity=0.131  Sum_probs=68.7

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCC-CeeeeEEE-ecceeee---CCc----------cccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQ-TLIGQRVY-RDSCVFA---DGE----------YLKD  244 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~-~~f~~rl~-Re~C~~~---~g~----------y~KD  244 (315)
                      +.++||+.++++++. +.+.++|-|++...+++++++.++.+. .++..++- ..+..+.   .+.          .++-
T Consensus        81 ~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~  160 (217)
T d1nnla_          81 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  160 (217)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHH
Confidence            668899999999999 579999999999999999999998653 23433332 1111111   110          1111


Q ss_pred             ccccCCCCCcEEEEECCchhhccCCCCeeeeccccCCC
Q 021254          245 LTILGRDLARIAIVDNTPQVFQLQVDNGIPIESWFGDP  282 (315)
Q Consensus       245 L~~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~~f~~d~  282 (315)
                      + ..+.++++++.|-|+..-..+-...|++| .|.+++
T Consensus       161 ~-~~~~~~~~~~~vGDs~~Di~~~~~ag~~v-a~~~~~  196 (217)
T d1nnla_         161 L-KEKFHFKKIIMIGDGATDMEACPPADAFI-GFGGNV  196 (217)
T ss_dssp             H-HHHHCCSCEEEEESSHHHHTTTTTSSEEE-EECSSC
T ss_pred             H-HhccCccccEEEEeCHhhHHHHHhCCceE-EECCCH
Confidence            1 11457889999999999887777788775 454444

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.34  E-value=0.00015  Score=58.88  Aligned_cols=95  Identities=13%  Similarity=0.157  Sum_probs=70.1

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCC--------c-----cccccc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADG--------E-----YLKDLT  246 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g--------~-----y~KDL~  246 (315)
                      ....+++.++++.+. +.+.+++.|++...++....+...... ++...+..+.......        .     ...-+.
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK  152 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhh-hhhhhhccccccccccccccccccccccchhhhHHH
Confidence            567899999999999 679999999999999999999998875 6766666555443211        0     112233


Q ss_pred             ccCCCCCcEEEEECCchhhccCCCCeeeec
Q 021254          247 ILGRDLARIAIVDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       247 ~Lgrdl~~vIIIDDsp~~~~~q~~NgI~I~  276 (315)
                      .++.+++++|.|-|+..-..+-..-|+.|-
T Consensus       153 ~~~~~~~~~i~iGDs~nDi~m~~~ag~~va  182 (210)
T d1j97a_         153 IEGINLEDTVAVGDGANDISMFKKAGLKIA  182 (210)
T ss_dssp             HHTCCGGGEEEEESSGGGHHHHHHCSEEEE
T ss_pred             HhcccccceEEecCCcChHHHHHHCCCCEE
Confidence            458899999999999976655445566654

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.33  E-value=0.00011  Score=58.81  Aligned_cols=66  Identities=27%  Similarity=0.251  Sum_probs=48.2

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc------------hh
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ------------SI  209 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~------------~~  209 (315)
                      +++++||||||+.....     ++.            .+...|++.++|..+. +.+.|+||||..            ..
T Consensus         2 K~i~~DiDGTI~~~~~~-----~y~------------~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~   64 (124)
T d1xpja_           2 KKLIVDLDGTLTQANTS-----DYR------------NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIH   64 (124)
T ss_dssp             CEEEECSTTTTBCCCCS-----CGG------------GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHH
T ss_pred             CEEEEeCCCCeECCCCC-----CcC------------ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHH
Confidence            57999999999875321     110            1346899999999996 889999999984            44


Q ss_pred             hHHHHHHHhCCCCCee
Q 021254          210 YAGQLLDILDPNQTLI  225 (315)
Q Consensus       210 YA~~vL~~LDp~~~~f  225 (315)
                      +.+...+.|...+-.+
T Consensus        65 ~~~~T~~wL~~~gI~Y   80 (124)
T d1xpja_          65 TLPIITEWLDKHQVPY   80 (124)
T ss_dssp             THHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHcCCCc
Confidence            5666777777666333

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=97.17  E-value=4.7e-05  Score=65.27  Aligned_cols=94  Identities=10%  Similarity=-0.047  Sum_probs=76.2

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCee-eeEEEecceeeeCC---cccccccccCCC-CCc
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLI-GQRVYRDSCVFADG---EYLKDLTILGRD-LAR  254 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f-~~rl~Re~C~~~~g---~y~KDL~~Lgrd-l~~  254 (315)
                      +...||+.++|++|+ +.+.++|.|++...+++.+++.++..+ +| +..++.+++...+.   .|.+-+..+|.. .+.
T Consensus        98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~-~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~  176 (257)
T d1swva_          98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  176 (257)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcc-cccccccccccccccccChHHHHHHHHHhCCCCcce
Confidence            467899999999998 569999999999999999999988776 45 56667777665543   388899999984 589


Q ss_pred             EEEEECCchhhccCCCCeeee
Q 021254          255 IAIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       255 vIIIDDsp~~~~~q~~NgI~I  275 (315)
                      ||+|+|++.-.......|+..
T Consensus       177 ~v~VgDs~~Di~aA~~aG~~t  197 (257)
T d1swva_         177 MIKVGDTVSDMKEGRNAGMWT  197 (257)
T ss_dssp             EEEEESSHHHHHHHHHTTSEE
T ss_pred             EEEEeCChhhHHHHHHCCCEE
Confidence            999999988776666666653

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00012  Score=60.82  Aligned_cols=94  Identities=10%  Similarity=0.035  Sum_probs=72.9

Q ss_pred             EeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEE-EecceeeeCC---cccccccccCCCCCcE
Q 021254          181 VRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV-YRDSCVFADG---EYLKDLTILGRDLARI  255 (315)
Q Consensus       181 V~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl-~Re~C~~~~g---~y~KDL~~Lgrdl~~v  255 (315)
                      ...+||+.++|++|. +.+.++|.|++....+..+++.+.... +|.... ..+.....+.   .|..-+..+|.+++++
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~  204 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGD-ILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI  204 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBC-CGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcch-hhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcE
Confidence            456899999999998 679999999999999999999887654 554322 2233333343   3788889999999999


Q ss_pred             EEEECCchhhccCCCCeeee
Q 021254          256 AIVDNTPQVFQLQVDNGIPI  275 (315)
Q Consensus       256 IIIDDsp~~~~~q~~NgI~I  275 (315)
                      ++|+|++.-.......|+..
T Consensus       205 l~vgD~~~dv~aA~~aG~~t  224 (253)
T d1zs9a1         205 LFLTDVTREASAAEEADVHV  224 (253)
T ss_dssp             EEEESCHHHHHHHHHTTCEE
T ss_pred             EEEeCCHHHHHHHHHcCCEE
Confidence            99999998776666677654

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.0005  Score=56.78  Aligned_cols=54  Identities=15%  Similarity=0.143  Sum_probs=40.4

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHH
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      +++.++|||||||+++...                       .-|...+.|+++.+...++|.|++....+...+..
T Consensus         2 ~~kl~~fDlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~i~Tgr~~~~~~~~~~~   55 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQK-----------------------ITKEMDDFLQKLRQKIKIGVVGGSDFEKVQEQLGN   55 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSC-----------------------CCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHCT
T ss_pred             CCEEEEEcCcCCeeCCCCc-----------------------CCHHHHHHHHHHHcCCCEEEEcCCChHHhHHHHhh
Confidence            5678888999999986421                       46788999999998777888888776555554433

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.001  Score=56.77  Aligned_cols=106  Identities=16%  Similarity=0.147  Sum_probs=67.1

Q ss_pred             CCCeEEEEeCCcceeceecC---CCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc--------
Q 021254          140 GLPITLVLDLDETLVHSSFD---NCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ--------  207 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~---~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~--------  207 (315)
                      ..++.++||+||||+.....   +....+              +..+.|++.+.|+.|. +.|.|+|+|...        
T Consensus        19 ~~~Kia~fDrDGtLik~~~~~~~~~~~~d--------------~~~l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s   84 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSGKVFPTSPSD--------------WRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLP   84 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSSCSSCSSTTC--------------CEESCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSC
T ss_pred             CcCcEEEEECCCceEeeCCCCcCCCChhh--------------ceeccCCHHHHHHHHHhCCcEEEEecCcchhccCCcC
Confidence            34678899999999986431   111112              2346899999999998 679999999953        


Q ss_pred             hhh----HHHHHHHhCCCCCeeeeEEEecceeeeCCc---cc---ccccc-cCCCCCcEEEEECCc
Q 021254          208 SIY----AGQLLDILDPNQTLIGQRVYRDSCVFADGE---YL---KDLTI-LGRDLARIAIVDNTP  262 (315)
Q Consensus       208 ~~Y----A~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~---KDL~~-Lgrdl~~vIIIDDsp  262 (315)
                      ...    -+.+++.|+..   +...+...+|.+.++.   +.   ++.+. .+.|+++.++|=|..
T Consensus        85 ~~~~~~~~~~i~~~l~~~---~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~  147 (195)
T d1yj5a1          85 AEVFKGKVEAVLEKLGVP---FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA  147 (195)
T ss_dssp             HHHHHHHHHHHHHHHTSC---CEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCC
T ss_pred             HHHHHHHHHHHHHHcCCC---ccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCcc
Confidence            222    34456666433   2333335666666543   32   33331 358889999999853

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=96.68  E-value=0.00046  Score=57.76  Aligned_cols=94  Identities=14%  Similarity=0.089  Sum_probs=79.3

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEEEecceeeeCCc---ccccccccCCCCCcEEE
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRVYRDSCVFADGE---YLKDLTILGRDLARIAI  257 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl~Re~C~~~~g~---y~KDL~~Lgrdl~~vII  257 (315)
                      +...|++.+.|+++. .+.+++.|++...++..+++.++... +|+.+++.+.....|..   |.+-++.+|.++++||+
T Consensus        92 ~~~~~~~~~~L~~l~-~~~~~v~s~~~~~~~~~~~~~~~~~~-~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~  169 (245)
T d1qq5a_          92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTD-SFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (245)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGG-GCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             cccchhhhHHHHHHh-hhceeEEeccchHHHHHHHhhccccc-ccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence            456799999999986 46789999999999999999998775 89999988887766653   88899999999999999


Q ss_pred             EECCchhhccCCCCeeeec
Q 021254          258 VDNTPQVFQLQVDNGIPIE  276 (315)
Q Consensus       258 IDDsp~~~~~q~~NgI~I~  276 (315)
                      |+|++.........|+...
T Consensus       170 VgD~~~di~~A~~aG~~tv  188 (245)
T d1qq5a_         170 VSSNGFDVGGAKNFGFSVA  188 (245)
T ss_dssp             EESCHHHHHHHHHHTCEEE
T ss_pred             EeCCHHHHHHHHHcCCeEE
Confidence            9999987766667776644

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.0018  Score=53.19  Aligned_cols=59  Identities=20%  Similarity=0.164  Sum_probs=46.5

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILD  219 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LD  219 (315)
                      ++..++.||||||+++...                       .-|...+.|+++. +...+++-|..+...+..++..+.
T Consensus         3 ~~~li~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~   59 (232)
T d1xvia_           3 QPLLVFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLG   59 (232)
T ss_dssp             CCEEEEEECTTTTSCSSCC-----------------------SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTT
T ss_pred             CCEEEEEECCCCccCCcCc-----------------------CCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhc
Confidence            3555666999999975321                       2466778899998 679999999999999999999987


Q ss_pred             CCC
Q 021254          220 PNQ  222 (315)
Q Consensus       220 p~~  222 (315)
                      ..+
T Consensus        60 ~~~   62 (232)
T d1xvia_          60 LQG   62 (232)
T ss_dssp             CTT
T ss_pred             cCC
Confidence            654

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.37  E-value=0.0034  Score=51.45  Aligned_cols=58  Identities=9%  Similarity=0.056  Sum_probs=46.7

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      -+.+++|+||||+++...                       +.|-..+.|+++. +...+++-|......+..++..+..
T Consensus         2 iK~i~~D~DGTL~~~~~~-----------------------i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~   58 (230)
T d1wr8a_           2 IKAISIDIDGTITYPNRM-----------------------IHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGT   58 (230)
T ss_dssp             CCEEEEESTTTTBCTTSC-----------------------BCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTC
T ss_pred             ceEEEEecCCCCcCCCCc-----------------------cCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCC
Confidence            468999999999976321                       3567788888887 5689999999999999999988877


Q ss_pred             CC
Q 021254          221 NQ  222 (315)
Q Consensus       221 ~~  222 (315)
                      ..
T Consensus        59 ~~   60 (230)
T d1wr8a_          59 SG   60 (230)
T ss_dssp             CS
T ss_pred             Cc
Confidence            65

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=96.36  E-value=0.0022  Score=54.59  Aligned_cols=57  Identities=19%  Similarity=0.174  Sum_probs=46.7

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCC
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      .|.+++||||||+++...                       +-|...+.|++|. +...++|-|..+...+..+++.+..
T Consensus         4 iKli~~DlDGTL~~~~~~-----------------------i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l   60 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPDHT-----------------------ISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHM   60 (271)
T ss_dssp             CCEEEECCCCCCSCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTC
T ss_pred             eeEEEEeCCccccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcC
Confidence            466999999999976321                       3477889999998 5699999999999999999999764


Q ss_pred             C
Q 021254          221 N  221 (315)
Q Consensus       221 ~  221 (315)
                      .
T Consensus        61 ~   61 (271)
T d1rkqa_          61 E   61 (271)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.21  E-value=0.0047  Score=51.11  Aligned_cols=55  Identities=15%  Similarity=0.161  Sum_probs=44.1

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||++...                         .+-..+-|+++. +...+++-|..+...+..+++.++..
T Consensus         3 Kli~~DlDGTLl~~~~-------------------------~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~   57 (243)
T d1wzca1           3 RLIFLDIDKTLIPGYE-------------------------PDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (243)
T ss_dssp             EEEEECCBTTTBSSSC-------------------------SGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             EEEEEeCCCCCCCCCC-------------------------CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence            6789999999996421                         122346677777 68999999999999999999999876


Q ss_pred             C
Q 021254          222 Q  222 (315)
Q Consensus       222 ~  222 (315)
                      .
T Consensus        58 ~   58 (243)
T d1wzca1          58 T   58 (243)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.12  E-value=0.0033  Score=52.46  Aligned_cols=60  Identities=12%  Similarity=0.013  Sum_probs=47.6

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++|+||||+++...                       .-|.+.+.|+.+. +...+++-|.....++..+...+...
T Consensus         4 Kli~~D~DGTL~~~~~~-----------------------i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~   60 (225)
T d1l6ra_           4 RLAAIDVDGNLTDRDRL-----------------------ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN   60 (225)
T ss_dssp             CEEEEEHHHHSBCTTSC-----------------------BCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred             EEEEEecCCCCcCCCCc-----------------------CCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCC
Confidence            57899999999976421                       3577888888887 56889999998888999999988776


Q ss_pred             CCee
Q 021254          222 QTLI  225 (315)
Q Consensus       222 ~~~f  225 (315)
                      ..++
T Consensus        61 ~~~i   64 (225)
T d1l6ra_          61 GPVF   64 (225)
T ss_dssp             SCEE
T ss_pred             ceEE
Confidence            5443

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.06  E-value=0.0047  Score=52.70  Aligned_cols=56  Identities=20%  Similarity=0.177  Sum_probs=44.9

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||++....                       .=|...+.|++|. +...+++-|..+...+..+++.++..
T Consensus         2 Kli~~DlDGTLl~~~~~-----------------------i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~   58 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSKHQ-----------------------VSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK   58 (285)
T ss_dssp             CEEEEECCCCCSCTTSC-----------------------CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred             eEEEEECCccccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCC
Confidence            46899999999976321                       2467778888887 56999999998888899999888765

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=96.05  E-value=0.0054  Score=52.42  Aligned_cols=56  Identities=16%  Similarity=0.110  Sum_probs=42.6

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+++...                       +-|...+.|+++++.-.+++-|......+..+++.+.+.
T Consensus         3 Kli~~DlDGTL~~~~~~-----------------------i~~~~~~al~~l~~~~~~~i~TGR~~~~~~~~~~~~~~~   58 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDNLE-----------------------ISEKDRRNIEKLSRKCYVVFASGRMLVSTLNVEKKYFKR   58 (267)
T ss_dssp             CEEEEECCCCCSCTTSC-----------------------CCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHHHHHSSS
T ss_pred             EEEEEeCCccccCCcCc-----------------------cCHHHHHHHHHHHcCCEEEEECCCChHHHHHHHHHhccc
Confidence            36899999999986421                       357788888888877778888877777777888776554

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0044  Score=50.56  Aligned_cols=50  Identities=18%  Similarity=0.262  Sum_probs=34.5

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHH
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLL  215 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL  215 (315)
                      ..++|||||||+.+...                       .-|...+.|+++.+.-.+++.|++....+...+
T Consensus         2 ~i~lFDlDGTLl~~~~~-----------------------is~~~~~~i~~l~~~g~~~i~tgrr~~~~~~~~   51 (244)
T d2fuea1           2 VLCLFDVDGTLTPARQK-----------------------IDPEVAAFLQKLRSRVQIGVVGGSDYCKIAEQL   51 (244)
T ss_dssp             EEEEEESBTTTBSTTSC-----------------------CCHHHHHHHHHHTTTSEEEEECSSCHHHHHHHH
T ss_pred             EEEEEccccCccCCCCc-----------------------CCHHHHHHHHHHHhCCCEEEEecCChhhhhhhh
Confidence            34446999999976421                       346678889999876677888887655544433

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=95.97  E-value=0.0031  Score=53.91  Aligned_cols=52  Identities=21%  Similarity=0.275  Sum_probs=38.1

Q ss_pred             CeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHH
Q 021254          142 PITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       142 k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      -+.++|||||||++...                        .=|++.+|++.+. ..+.+++.|++..+..+.+.+.
T Consensus         3 ik~VifDlDGTL~~~~~------------------------~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~   55 (250)
T d2c4na1           3 IKNVICDIDGVLMHDNV------------------------AVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANR   55 (250)
T ss_dssp             CCEEEEECBTTTEETTE------------------------ECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHH
T ss_pred             CCEEEEECCCeeEECCC------------------------cCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHH
Confidence            46899999999987532                        1278899999998 5699999997665444444333

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=95.72  E-value=0.0053  Score=52.38  Aligned_cols=53  Identities=25%  Similarity=0.211  Sum_probs=38.3

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHH
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDI  217 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~  217 (315)
                      +-+.++|||||||+++..                        .=|++.++|++|. +...+++.|+....-...+.+.
T Consensus         6 ~ik~vlFDlDGTL~~~~~------------------------~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~   59 (261)
T d1vjra_           6 KIELFILDMDGTFYLDDS------------------------LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRK   59 (261)
T ss_dssp             GCCEEEECCBTTTEETTE------------------------ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHH
T ss_pred             hCCEEEEeCCCeeEECCc------------------------cCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHH
Confidence            346899999999998632                        1278999999998 5788999987654444444443

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=95.72  E-value=0.0058  Score=51.73  Aligned_cols=58  Identities=14%  Similarity=-0.022  Sum_probs=44.4

Q ss_pred             CCCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHh
Q 021254          140 GLPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDIL  218 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~L  218 (315)
                      ..-+.+++||||||+.....                      ..-|...+.|+++. +...++|-|..+...+..++..+
T Consensus         8 ~~ikli~~DlDGTLl~~~~~----------------------~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l   65 (283)
T d2b30a1           8 ADIKLLLIDFDGTLFVDKDI----------------------KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEE   65 (283)
T ss_dssp             CCCCEEEEETBTTTBCCTTT----------------------CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHH
T ss_pred             cCccEEEEECCCCCcCCCCC----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHh
Confidence            44568999999999843211                      13577788888887 68999999999998888888765


Q ss_pred             C
Q 021254          219 D  219 (315)
Q Consensus       219 D  219 (315)
                      .
T Consensus        66 ~   66 (283)
T d2b30a1          66 N   66 (283)
T ss_dssp             H
T ss_pred             C
Confidence            3

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.65  E-value=0.0039  Score=53.21  Aligned_cols=48  Identities=17%  Similarity=0.187  Sum_probs=35.4

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHH
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQL  214 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~v  214 (315)
                      ++++|||||||++...                        .=|++.++|++|. ....+++-|..+.+..+.+
T Consensus         3 k~v~fDlDGTL~~~~~------------------------~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~   51 (253)
T d1yv9a1           3 QGYLIDLDGTIYLGKE------------------------PIPAGKRFVERLQEKDLPFLFVTNNTTKSPETV   51 (253)
T ss_dssp             CEEEECCBTTTEETTE------------------------ECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHH
T ss_pred             CEEEEcCCCccEeCCC------------------------cCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHH
Confidence            4799999999987632                        1288999999998 5788999886554333333

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=95.35  E-value=0.0062  Score=52.05  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=32.9

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchh
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSI  209 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~  209 (315)
                      +.++|||||||++...                        .=|++.++|++|. ....+++-|.+..+
T Consensus         3 k~vlFDlDGTL~~~~~------------------------~i~~a~e~l~~l~~~g~~~~~~TN~s~~   46 (253)
T d1wvia_           3 KGYLIDLDGTIYKGKD------------------------RIPAGEDFVKRLQERQLPYILVTNNTTR   46 (253)
T ss_dssp             CEEEEECBTTTEETTE------------------------ECHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred             CEEEEcCcCceEECCC------------------------cCccHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            5799999999998632                        1388899998887 46888888865443

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.29  E-value=0.008  Score=50.40  Aligned_cols=57  Identities=21%  Similarity=0.138  Sum_probs=42.0

Q ss_pred             CCeEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCC
Q 021254          141 LPITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDP  220 (315)
Q Consensus       141 ~k~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp  220 (315)
                      +++.+++||||||+.....                       . ..++.+++..++...++|-|......+.++++.+..
T Consensus         2 ~~~li~~DlDGTL~~~~~~-----------------------~-~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~   57 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGDQQA-----------------------L-EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGL   57 (244)
T ss_dssp             CSEEEEECTBTTTBSCHHH-----------------------H-HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTC
T ss_pred             CceEEEEECcccCCCCCCC-----------------------H-HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCC
Confidence            5677888999999875321                       0 234566666667888999999888889898888765


Q ss_pred             C
Q 021254          221 N  221 (315)
Q Consensus       221 ~  221 (315)
                      .
T Consensus        58 ~   58 (244)
T d1s2oa1          58 M   58 (244)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.72  E-value=0.017  Score=46.90  Aligned_cols=51  Identities=22%  Similarity=0.200  Sum_probs=35.1

Q ss_pred             EEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhhcccEEEEEcCCchhhHH
Q 021254          144 TLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVASMFDVVIFTAGQSIYAG  212 (315)
Q Consensus       144 tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~  212 (315)
                      .|+|||||||+.....+..                  -...|.+.+.|+++.+...++|-|..+...+.
T Consensus         2 Li~~DlDGTL~~~~~~~~~------------------~~i~~~~~~~l~~l~~~~~v~i~TGR~~~~l~   52 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNPEE------------------SYADAGLLSLISDLKERFDTYIVTGRSPEEIS   52 (229)
T ss_dssp             EEEEECBTTTBCCCSCGGG------------------CCCCHHHHHHHHHHHHHSEEEEECSSCHHHHH
T ss_pred             EEEEEecCCCCCCCCChhh------------------CCCCHHHHHHHHHHhhCCCEEEEcCCCHHHhh
Confidence            4788999999964321110                  11467888999998877788888777655543

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=94.70  E-value=0.0078  Score=51.02  Aligned_cols=57  Identities=14%  Similarity=0.174  Sum_probs=43.3

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCC
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPN  221 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~  221 (315)
                      +.+++||||||+.+...                      ...|...+.|+++. +...+++-|......+.++++.+...
T Consensus         3 Kli~~DlDGTLl~~~~~----------------------~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~   60 (269)
T d1rlma_           3 KVIVTDMDGTFLNDAKT----------------------YNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDE   60 (269)
T ss_dssp             CEEEECCCCCCSCTTSC----------------------CCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTT
T ss_pred             EEEEEeCCccCcCCCCc----------------------CChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcc
Confidence            46899999999976421                      02467788888888 45899999988888888888777655

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.63  E-value=0.0068  Score=48.48  Aligned_cols=96  Identities=13%  Similarity=0.103  Sum_probs=68.5

Q ss_pred             EeeCchHHHHHHHhhcccEEEEEcCCchhhHHHHHHHhCCCCCeeeeEE-Eecceeee-----CCc-ccccccccCCCCC
Q 021254          181 VRQRPYLHMFLEAVASMFDVVIFTAGQSIYAGQLLDILDPNQTLIGQRV-YRDSCVFA-----DGE-YLKDLTILGRDLA  253 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~~fEIvIfTas~~~YA~~vL~~LDp~~~~f~~rl-~Re~C~~~-----~g~-y~KDL~~Lgrdl~  253 (315)
                      +...|+...+...+.+.+.+++.|.+....+..+...+.... .+...+ +...+...     .+. ..+....+|.+++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  146 (206)
T d1rkua_          68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  146 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred             ccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCch-hhcceeeeecccccccccccchhhHHHHHHHhccccc
Confidence            667899999999999999999999999999999999998775 344333 23322221     111 1234445688999


Q ss_pred             cEEEEECCchhhccCCCCeeeecc
Q 021254          254 RIAIVDNTPQVFQLQVDNGIPIES  277 (315)
Q Consensus       254 ~vIIIDDsp~~~~~q~~NgI~I~~  277 (315)
                      +|+.|=|+.--..+-..-|+.|-.
T Consensus       147 eviaiGDg~NDi~Ml~~Ag~gIAm  170 (206)
T d1rkua_         147 RVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             EEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             ceEEecCCccCHHHHHhCCccEEE
Confidence            999999988766555566666653

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.69  E-value=0.047  Score=48.66  Aligned_cols=113  Identities=16%  Similarity=0.224  Sum_probs=71.1

Q ss_pred             eEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHHHhCCCCC---eeeeEEEecceeee---CCc----cccc----
Q 021254          180 FVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLDILDPNQT---LIGQRVYRDSCVFA---DGE----YLKD----  244 (315)
Q Consensus       180 yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~~LDp~~~---~f~~rl~Re~C~~~---~g~----y~KD----  244 (315)
                      -+.+|||+.+|+++|. ..+.++|+|+|...+++++++.+.....   ++..++.-+.....   .+.    +.|.    
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~  212 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  212 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence            3779999999999999 5799999999999999999999865421   34333322221111   111    1111    


Q ss_pred             --cc--ccCCCCCcEEEEECCchhhcc-----CCCCeeeeccccCCCCChHHHHHHHHHhh
Q 021254          245 --LT--ILGRDLARIAIVDNTPQVFQL-----QVDNGIPIESWFGDPSDSALLSLLMFLET  296 (315)
Q Consensus       245 --L~--~Lgrdl~~vIIIDDsp~~~~~-----q~~NgI~I~~f~~d~~D~eLl~L~~~L~~  296 (315)
                        ..  .+..+.+++|+|=|+..-..+     +.+|++.| .|..+..+.   .+..|.+.
T Consensus       213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~i-gFL~~~~ee---~l~~y~~~  269 (291)
T d2bdua1         213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE---LLEKYMDS  269 (291)
T ss_dssp             TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEE-EEECSCHHH---HHHHHHHH
T ss_pred             hhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeee-ehhHhhHHH---HHHHHHhc
Confidence              11  224567889999999986533     34566654 454444333   35556554

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=91.93  E-value=0.035  Score=47.43  Aligned_cols=120  Identities=11%  Similarity=0.117  Sum_probs=63.2

Q ss_pred             CCCeEEEEeCCcceeceecC--------CCCCCCce-eeeeecCe--eeeeeEeeCchHHHHHHHhh-cccEEEEEcCCc
Q 021254          140 GLPITLVLDLDETLVHSSFD--------NCKDADFS-FPIHSKME--VQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQ  207 (315)
Q Consensus       140 ~~k~tLVLDLDeTLVhs~~~--------~~~~~d~~-~~i~~~~~--~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~  207 (315)
                      .+++.+|||+|+|+++++.-        .+...++. .+..|.-.  .....-.--||+.+||+.+. +..+|+.-|+..
T Consensus        33 ~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTnR~  112 (209)
T d2b82a1          33 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRS  112 (209)
T ss_dssp             CCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSC
T ss_pred             CCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeCCc
Confidence            44569999999999998631        01111110 00111000  00011223579999999999 689999999977


Q ss_pred             hhhHHHHHHH----hCCCCCeeeeEEEecceeee--CCcccccccccCCCCCcEEEEECCchhhc
Q 021254          208 SIYAGQLLDI----LDPNQTLIGQRVYRDSCVFA--DGEYLKDLTILGRDLARIAIVDNTPQVFQ  266 (315)
Q Consensus       208 ~~YA~~vL~~----LDp~~~~f~~rl~Re~C~~~--~g~y~KDL~~Lgrdl~~vIIIDDsp~~~~  266 (315)
                      +...+..++.    ++-...--.+.+++..-...  +..++|+.       .=++++.|.-.-+.
T Consensus       113 ~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y-------~I~l~~GD~l~Df~  170 (209)
T d2b82a1         113 PTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDK-------NIRIFYGDSDNDIT  170 (209)
T ss_dssp             CCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHT-------TEEEEEESSHHHHH
T ss_pred             hhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHc-------CeEEEecCCHHHHh
Confidence            6555444433    33211112344554321111  11233432       33677888777664

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=91.13  E-value=0.046  Score=46.09  Aligned_cols=52  Identities=23%  Similarity=0.182  Sum_probs=33.9

Q ss_pred             eEEEEeCCcceeceecCCCCCCCceeeeeecCeeeeeeEeeCchHHHHHHHhh-cccEEEEEcCCchhhHHHHHH
Q 021254          143 ITLVLDLDETLVHSSFDNCKDADFSFPIHSKMEVQTVFVRQRPYLHMFLEAVA-SMFDVVIFTAGQSIYAGQLLD  216 (315)
Q Consensus       143 ~tLVLDLDeTLVhs~~~~~~~~d~~~~i~~~~~~~~~yV~lRP~l~eFL~~l~-~~fEIvIfTas~~~YA~~vL~  216 (315)
                      |.+++||||||+......                      .-+...+.|+++. +...+++-|..+...+..+.+
T Consensus         2 k~if~DlDGTL~~~~~~~----------------------i~~~~~~al~~l~~~gi~v~~~TGR~~~~~~~l~~   54 (260)
T d2rbka1           2 KALFFDIDGTLVSFETHR----------------------IPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSE   54 (260)
T ss_dssp             CEEEECSBTTTBCTTTSS----------------------CCHHHHHHHHHHHHTTCEEEEECSSCGGGCCSCHH
T ss_pred             eEEEEECCCCCcCCCCCC----------------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence            578999999999642110                      2345567777777 458888888766555544433

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.56  E-value=0.11  Score=42.25  Aligned_cols=30  Identities=23%  Similarity=0.223  Sum_probs=23.7

Q ss_pred             EeeCchHHHHHHHhhc--ccEEEEEcCCchhh
Q 021254          181 VRQRPYLHMFLEAVAS--MFDVVIFTAGQSIY  210 (315)
Q Consensus       181 V~lRP~l~eFL~~l~~--~fEIvIfTas~~~Y  210 (315)
                      ...-||+.+.|++|++  ++++.|-|+....+
T Consensus        73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~  104 (195)
T d1q92a_          73 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMF  104 (195)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCC
T ss_pred             CCcccCHHHHHHHHhhccCccceEEccccccC
Confidence            3445999999999984  67899999987554