Citrus Sinensis ID: 021276

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-----
MPNDSHAPNSKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSVGANVIAAAVAGAATTIATNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDPQPHTL
ccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccccHHHHcccHHHHHHHHHHHHHHHHHccccccccccc
cccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHEHccccHcHcccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccc
mpndshapnskgilcnagagAAAGIIAATFVCPLDVIKtrlqvhglpkltngtvkgSLIVGSLEQIFQKEGlrgmyrglsptvlallPNWAVYFTMYEQLKSFLcsedknhhlsVGANVIAAAVAGAATTIATNPLWVVKTRLqtqgmkagvvpYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHLadqgntsmdklSARDVAVASSVSKIFASTLTYPHEVVRSrlqeqghhsekrySGVVDCIKKVFqqeglpgfyrgcatnllrttpaavITFTSFEMIHRFLvsyfppdpqphtl
MPNDSHAPNSKGILCNAGAGAAAGIIAATFVCPLDVIKTRLqvhglpkltngtvkgsLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSVGANVIAAAVAGAATTIATNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSrlqeqghhsekrysgvVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSyfppdpqphtl
MPNDSHAPNSKGILCNagagaaagiiaaTFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSvganviaaavagaattiatnPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLsardvavassvsKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDPQPHTL
***********GILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHL*******************TNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHLAD***********RDVAVASSVSKIFASTLTYPHEVVRS**********KRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYF*********
***************NAGAGAAAGIIAATFVCPLDVIKTRL*****************IVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFL*********SVGANVIAAAVAGAATTIATNPLWVVKTRL***************LSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHL************ARDVAVASSVSKIFASTLTYPHEVVRS***************VVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFL*************
*********SKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSVGANVIAAAVAGAATTIATNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRL**********YSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDPQPHTL
*******PNSKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSVGANVIAAAVAGAATTIATNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDP*****
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooo
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MPNDSHAPNSKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSVGANVIAAAVAGAATTIATNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDPQPHTL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query315 2.2.26 [Sep-21-2011]
O22261312 Nicotinamide adenine dinu yes no 0.974 0.983 0.802 1e-139
Q8RWA5363 Nicotinamide adenine dinu no no 0.885 0.768 0.650 1e-104
P39953335 Mitochondrial nicotinamid yes no 0.914 0.859 0.423 5e-61
Q54FU9329 Mitochondrial substrate c yes no 0.885 0.848 0.418 1e-58
P40556373 Mitochondrial nicotinamid no no 0.869 0.734 0.438 1e-57
Q95J75315 Mitochondrial folate tran N/A no 0.879 0.879 0.400 4e-50
Q9H2D1315 Mitochondrial folate tran yes no 0.879 0.879 0.397 7e-50
Q8BMG8316 Mitochondrial folate tran yes no 0.866 0.863 0.410 3e-49
Q7XA87308 Folate transporter 1, chl no no 0.888 0.909 0.371 3e-45
Q54QN2306 Mitochondrial substrate c no no 0.911 0.937 0.327 1e-42
>sp|O22261|NDT1_ARATH Nicotinamide adenine dinucleotide transporter 1, chloroplastic OS=Arabidopsis thaliana GN=NDT1 PE=1 SV=2 Back     alignment and function desciption
 Score =  493 bits (1269), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/309 (80%), Positives = 282/309 (91%), Gaps = 2/309 (0%)

Query: 1   MPNDSHAPNSKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIV 60
           M  +SH PNSK +LCNA AGAAAG++AATFVCPLDVIKTR QVHGLPKL +  +KGSLIV
Sbjct: 1   MSANSHPPNSKNVLCNAAAGAAAGVVAATFVCPLDVIKTRFQVHGLPKLGDANIKGSLIV 60

Query: 61  GSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSVGANVI 120
           GSLEQIF++EG+RG+YRGLSPTV+ALL NWA+YFTMY+QLKSFLCS D  H LSVGANV+
Sbjct: 61  GSLEQIFKREGMRGLYRGLSPTVMALLSNWAIYFTMYDQLKSFLCSND--HKLSVGANVL 118

Query: 121 AAAVAGAATTIATNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVP 180
           AA+ AGAATTIATNPLWVVKTRLQTQGM+ G+VPY+ST SAL RIA EEGIRGLYSGLVP
Sbjct: 119 AASGAGAATTIATNPLWVVKTRLQTQGMRVGIVPYKSTFSALRRIAYEEGIRGLYSGLVP 178

Query: 181 ALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVR 240
           ALAGISHVAIQFPTYE IK++LA +G+ S+D L+ARDVAVASS++KIFASTLTYPHEVVR
Sbjct: 179 ALAGISHVAIQFPTYEMIKVYLAKKGDKSVDNLNARDVAVASSIAKIFASTLTYPHEVVR 238

Query: 241 SRLQEQGHHSEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHR 300
           +RLQEQGHHSEKRYSGV DCIKKVF+++G PGFYRGCATNLLRTTPAAVITFTSFEM+HR
Sbjct: 239 ARLQEQGHHSEKRYSGVRDCIKKVFEKDGFPGFYRGCATNLLRTTPAAVITFTSFEMVHR 298

Query: 301 FLVSYFPPD 309
           FLV++ P +
Sbjct: 299 FLVTHIPSE 307
Mediates the NAD(+) import into chloroplast. Favors the NAD(+)(in)/ADP or AMP(out) antiport exchange, but is also able to catalyze a low unidirectional transport (uniport) of NAD(+). Transports NAD(+), nicotinic acid adenine dinucleotide, nicotinamide mononucleotide, nicotinic acid mononucleotide, FAD, FMN, TTP, TDP, TMP, UTP, UDP, UMP, CTP, CDP, CMP, GTP, GDP, GMP, 3'-AMP, ATP, ADP, AND AMP, has low transport activity with cAMP, pyrophosphate, NADH and alpha-NAD(+), and has no activity with NADP(+), NADPH, nicotinamide, nicotinic acid, adenosine, thiamine mono- or diphosphate, inorganic phosphate, CoA, folate, NaCl, malate, malonate, citrate, fumarate, aspartate, glutamate, S-adenosylmethionine, lysine, arginine, and ornithine.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8RWA5|NDT2_ARATH Nicotinamide adenine dinucleotide transporter 2, mitochondrial OS=Arabidopsis thaliana GN=NDT2 PE=1 SV=1 Back     alignment and function description
>sp|P39953|YEA6_YEAST Mitochondrial nicotinamide adenine dinucleotide transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YEA6 PE=1 SV=1 Back     alignment and function description
>sp|Q54FU9|MCFW_DICDI Mitochondrial substrate carrier family protein W OS=Dictyostelium discoideum GN=mcfW PE=3 SV=1 Back     alignment and function description
>sp|P40556|YIA6_YEAST Mitochondrial nicotinamide adenine dinucleotide transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIA6 PE=1 SV=1 Back     alignment and function description
>sp|Q95J75|MFTC_MACFA Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1 Back     alignment and function description
>sp|Q9H2D1|MFTC_HUMAN Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2 Back     alignment and function description
>sp|Q8BMG8|MFTC_MOUSE Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32 PE=2 SV=1 Back     alignment and function description
>sp|Q7XA87|FOLT1_ARATH Folate transporter 1, chloroplastic OS=Arabidopsis thaliana GN=FOLT1 PE=2 SV=1 Back     alignment and function description
>sp|Q54QN2|MCFM_DICDI Mitochondrial substrate carrier family protein M OS=Dictyostelium discoideum GN=mcfM PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query315
225437465315 PREDICTED: mitochondrial nicotinamide ad 1.0 1.0 0.882 1e-151
224068406322 predicted protein [Populus trichocarpa] 0.993 0.972 0.852 1e-148
255564278314 mitochondrial carrier protein, putative 0.996 1.0 0.866 1e-147
356505604317 PREDICTED: mitochondrial nicotinamide ad 0.996 0.990 0.814 1e-145
356572758317 PREDICTED: mitochondrial substrate carri 0.996 0.990 0.808 1e-145
224128430322 predicted protein [Populus trichocarpa] 0.987 0.965 0.844 1e-144
449436459311 PREDICTED: mitochondrial substrate carri 0.987 1.0 0.819 1e-138
297824849312 mitochondrial substrate carrier family p 0.974 0.983 0.809 1e-138
18407372312 NAD+ transporter 1 [Arabidopsis thaliana 0.974 0.983 0.802 1e-137
326527973343 predicted protein [Hordeum vulgare subsp 0.990 0.909 0.719 1e-130
>gi|225437465|ref|XP_002273574.1| PREDICTED: mitochondrial nicotinamide adenine dinucleotide transporter 1 isoform 1 [Vitis vinifera] gi|297743935|emb|CBI36905.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/315 (88%), Positives = 294/315 (93%)

Query: 1   MPNDSHAPNSKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIV 60
           MP +SHAP+ +G+LCNAGAGAAAG+IAATFVCPLDVIKTR QVHGLP+L NG +KGSLIV
Sbjct: 1   MPAESHAPSPRGLLCNAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPQLGNGNIKGSLIV 60

Query: 61  GSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSVGANVI 120
           GSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFT+YEQLKSFLCS D+NH LS+GAN+I
Sbjct: 61  GSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTIYEQLKSFLCSNDENHQLSIGANMI 120

Query: 121 AAAVAGAATTIATNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVP 180
           AA  AGAATTIATNPLWVVKTRLQTQGM+AGVVPY STLSAL RIA EEGIRGLYSGLVP
Sbjct: 121 AACGAGAATTIATNPLWVVKTRLQTQGMRAGVVPYSSTLSALRRIAYEEGIRGLYSGLVP 180

Query: 181 ALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVR 240
           ALAGISHVAIQFPTYEKIKM+LA + NT+MDKL A DVAVASSVSKIFASTLTYPHEVVR
Sbjct: 181 ALAGISHVAIQFPTYEKIKMYLASRENTTMDKLGAPDVAVASSVSKIFASTLTYPHEVVR 240

Query: 241 SRLQEQGHHSEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHR 300
           SRLQEQGHHSEKRYSGVVDCIKKV QQEGL GFYRGCATNLLRTTPAAVITFTSFEMIHR
Sbjct: 241 SRLQEQGHHSEKRYSGVVDCIKKVLQQEGLAGFYRGCATNLLRTTPAAVITFTSFEMIHR 300

Query: 301 FLVSYFPPDPQPHTL 315
           FLV+  PPDP PHTL
Sbjct: 301 FLVNLLPPDPHPHTL 315

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224068406|ref|XP_002302737.1| predicted protein [Populus trichocarpa] gi|222844463|gb|EEE82010.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255564278|ref|XP_002523136.1| mitochondrial carrier protein, putative [Ricinus communis] gi|223537698|gb|EEF39321.1| mitochondrial carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356505604|ref|XP_003521580.1| PREDICTED: mitochondrial nicotinamide adenine dinucleotide transporter 2 [Glycine max] Back     alignment and taxonomy information
>gi|356572758|ref|XP_003554533.1| PREDICTED: mitochondrial substrate carrier family protein W-like [Glycine max] Back     alignment and taxonomy information
>gi|224128430|ref|XP_002320327.1| predicted protein [Populus trichocarpa] gi|222861100|gb|EEE98642.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449436459|ref|XP_004136010.1| PREDICTED: mitochondrial substrate carrier family protein W-like [Cucumis sativus] gi|449505342|ref|XP_004162441.1| PREDICTED: mitochondrial substrate carrier family protein W-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297824849|ref|XP_002880307.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297326146|gb|EFH56566.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18407372|ref|NP_566102.1| NAD+ transporter 1 [Arabidopsis thaliana] gi|75277252|sp|O22261.2|NDT1_ARATH RecName: Full=Nicotinamide adenine dinucleotide transporter 1, chloroplastic; Short=AtNDT1; AltName: Full=NAD(+) transporter 1 gi|13937206|gb|AAK50096.1|AF372957_1 At2g47490/T30B22.21 [Arabidopsis thaliana] gi|18491125|gb|AAL69531.1| At2g47490/T30B22.21 [Arabidopsis thaliana] gi|20196964|gb|AAC62861.2| putative mitochondrial carrier protein [Arabidopsis thaliana] gi|21537111|gb|AAM61452.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gi|73531025|emb|CAI38582.1| mitochondrial carrier like protein [Arabidopsis thaliana] gi|222423082|dbj|BAH19521.1| AT2G47490 [Arabidopsis thaliana] gi|283482334|emb|CAR70090.1| chloroplastic nicotinamide adenine dinucleotide transporter 1 [Arabidopsis thaliana] gi|330255756|gb|AEC10850.1| NAD+ transporter 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|326527973|dbj|BAJ89038.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query315
TAIR|locus:2062002312 NDT1 "NAD+ transporter 1" [Ara 0.974 0.983 0.689 1.2e-113
TAIR|locus:2031240363 NDT2 "NAD+ transporter 2" [Ara 0.936 0.812 0.548 1.8e-85
CGD|CAL0003970366 orf19.1393 [Candida albicans ( 0.850 0.732 0.388 2.3e-48
SGD|S000000732335 YEA6 "Putative mitochondrial N 0.869 0.817 0.377 5.4e-47
FB|FBgn0033391360 CG8026 [Drosophila melanogaste 0.787 0.688 0.368 6.8e-47
SGD|S000001268373 YIA6 "Mitochondrial NAD+ trans 0.825 0.697 0.387 1.2e-44
DICTYBASE|DDB_G0290669329 mcfW "mitochondrial substrate 0.838 0.802 0.383 1.9e-44
UNIPROTKB|E1BSF1322 SLC25A32 "Uncharacterized prot 0.825 0.807 0.386 7.3e-43
UNIPROTKB|Q5ZJN5322 SLC25A32 "Uncharacterized prot 0.825 0.807 0.386 7.3e-43
POMBASE|SPAC227.03c371 SPAC227.03c "mitochondrial NAD 0.447 0.380 0.385 3.3e-42
TAIR|locus:2062002 NDT1 "NAD+ transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
 Identities = 213/309 (68%), Positives = 240/309 (77%)

Query:     1 MPNDSHAPNSKGILCNXXXXXXXXXXXXTFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIV 60
             M  +SH PNSK +LCN            TFVCPLDVIKTR QVHGLPKL +  +KGSLIV
Sbjct:     1 MSANSHPPNSKNVLCNAAAGAAAGVVAATFVCPLDVIKTRFQVHGLPKLGDANIKGSLIV 60

Query:    61 GSLEQIFQKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSXXXXXX 120
             GSLEQIF++EG+RG+YRGLSPTV+ALL NWA+YFTMY+QLKSFLCS D  H LS      
Sbjct:    61 GSLEQIFKREGMRGLYRGLSPTVMALLSNWAIYFTMYDQLKSFLCSND--HKLSVGANVL 118

Query:   121 XXXXXXXXXXXXXXPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVP 180
                           PLWVVKTRLQTQGM+ G+VPY+ST SAL RIA EEGIRGLYSGLVP
Sbjct:   119 AASGAGAATTIATNPLWVVKTRLQTQGMRVGIVPYKSTFSALRRIAYEEGIRGLYSGLVP 178

Query:   181 ALAGISHVAIQFPTYEKIKMHLADQGNTSMDKLXXXXXXXXXXXXKIFASTLTYPHEVVR 240
             ALAGISHVAIQFPTYE IK++LA +G+ S+D L            KIFASTLTYPHEVVR
Sbjct:   179 ALAGISHVAIQFPTYEMIKVYLAKKGDKSVDNLNARDVAVASSIAKIFASTLTYPHEVVR 238

Query:   241 SRLQEQGHHSEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHR 300
             +RLQEQGHHSEKRYSGV DCIKKVF+++G PGFYRGCATNLLRTTPAAVITFTSFEM+HR
Sbjct:   239 ARLQEQGHHSEKRYSGVRDCIKKVFEKDGFPGFYRGCATNLLRTTPAAVITFTSFEMVHR 298

Query:   301 FLVSYFPPD 309
             FLV++ P +
Sbjct:   299 FLVTHIPSE 307
GO:0005215 "transporter activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0031969 "chloroplast membrane" evidence=IDA
GO:0043132 "NAD transport" evidence=IDA
GO:0051724 "NAD transporter activity" evidence=IDA
TAIR|locus:2031240 NDT2 "NAD+ transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
CGD|CAL0003970 orf19.1393 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
SGD|S000000732 YEA6 "Putative mitochondrial NAD+ transporter" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
FB|FBgn0033391 CG8026 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
SGD|S000001268 YIA6 "Mitochondrial NAD+ transporter" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0290669 mcfW "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|E1BSF1 SLC25A32 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZJN5 SLC25A32 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
POMBASE|SPAC227.03c SPAC227.03c "mitochondrial NAD transmembrane transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P39953YEA6_YEASTNo assigned EC number0.42370.91420.8597yesno
Q54FU9MCFW_DICDINo assigned EC number0.41890.88570.8480yesno
Q8BMG8MFTC_MOUSENo assigned EC number0.41070.86660.8639yesno
Q9H2D1MFTC_HUMANNo assigned EC number0.39730.87930.8793yesno
O22261NDT1_ARATHNo assigned EC number0.80250.97460.9839yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query315
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-27
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-26
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-26
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-24
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 4e-12
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-09
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-06
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information 
 Score =  101 bits (255), Expect = 3e-27
 Identities = 35/96 (36%), Positives = 58/96 (60%)

Query: 211 DKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVVDCIKKVFQQEGL 270
             LS     +A  ++   A+T+TYP +VV++RLQ       ++Y G++DC KK++++EG+
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGI 60

Query: 271 PGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYF 306
            G Y+G   NLLR  PAA I F ++E + + L+   
Sbjct: 61  RGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96

Length = 96
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 315
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.97
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.96
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.96
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.94
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.94
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.94
KOG0766297 consensus Predicted mitochondrial carrier protein 99.93
KOG0036463 consensus Predicted mitochondrial carrier protein 99.93
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.93
KOG0765333 consensus Predicted mitochondrial carrier protein 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG1519297 consensus Predicted mitochondrial carrier protein 99.9
KOG2745321 consensus Mitochondrial carrier protein [General f 99.9
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.81
KOG2954427 consensus Mitochondrial carrier protein [General f 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.7
KOG2745321 consensus Mitochondrial carrier protein [General f 99.65
KOG1519297 consensus Predicted mitochondrial carrier protein 99.42
KOG2954427 consensus Mitochondrial carrier protein [General f 98.74
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=2e-60  Score=398.66  Aligned_cols=288  Identities=35%  Similarity=0.571  Sum_probs=254.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHhhchHHHHHHHHhccCCCCCCCCCcCcccHHHHHHHHHHhhchhhccccchhhhhhhccch
Q 021276           11 KGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPNW   90 (315)
Q Consensus        11 ~~~~~~~~~g~~a~~~~~~i~~Pld~~k~~~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~l~~G~~~~~~~~~~~~   90 (315)
                      ......+++|++||+++.+++.|||++|+|+|++.++   ....+..++++.+++|+++||++|+|||..+++++.+++.
T Consensus        25 ~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~---~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~  101 (320)
T KOG0752|consen   25 ITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEP---SKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYG  101 (320)
T ss_pred             HHHHHHHhcchHHHHHHHHhcCchhHceEEEEecccc---ccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecc
Confidence            3667789999999999999999999999999999865   2234555599999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhccCCCCCCCchHHHHHHHHHHHHHHHHhhccHHHHHHHHhhcCCCCCCcCCCcHHHHHHHHHHhhC
Q 021276           91 AVYFTMYEQLKSFLCSEDKNHHLSVGANVIAAAVAGAATTIATNPLWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEG  170 (315)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~i~~P~d~ik~r~~~~~~~~~~~~~~~~~~~~~~i~~~~G  170 (315)
                      +++|..||..++...........+...++++|++||+++.+++||+|++|+|+..+....   .|+++.+++++|+++||
T Consensus       102 avqf~aye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~---~y~~l~~a~~~I~~~eG  178 (320)
T KOG0752|consen  102 AVQFSAYEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELK---VYRGLLHAFKTIYREEG  178 (320)
T ss_pred             hhhhhHHHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccc---cCCcHHHHHHHHHHhcc
Confidence            999999999998654444334778889999999999999999999999999999876432   59999999999999999


Q ss_pred             hhhhccchhhhhcc-hhhhhhhHhhHHHHHHH-HHhcCCCCCCCCChHHHHHHHHHHHHHHhhhcccHHHHHHHHhhcCC
Q 021276          171 IRGLYSGLVPALAG-ISHVAIQFPTYEKIKMH-LADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGH  248 (315)
Q Consensus       171 ~~~ly~G~~~~l~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~Pld~ik~r~q~~~~  248 (315)
                      ++|||||+.|++++ .|+.++.|..||.+|++ +.+..+.  ++.+.+..+++|++||.++..++||||+||+|||+.+.
T Consensus       179 i~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~~~~--~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~  256 (320)
T KOG0752|consen  179 IRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKSSGN--KELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGL  256 (320)
T ss_pred             hhhhhcCcchhhheehhhhhhHHHHHHHHHHhhccccccc--chhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCc
Confidence            99999999999998 57999999999999995 3333222  45667788999999999999999999999999999875


Q ss_pred             C---CCCCCCCHHHHHHHHHHhcCccccccchhhhHhhhccchhhHHHHHHHHHHHhhccC
Q 021276          249 H---SEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYF  306 (315)
Q Consensus       249 ~---~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~  306 (315)
                      .   +..++.+++||+++|+++||+.|||||+.|++++.+|..++.|.+||.+++++....
T Consensus       257 ~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~~l~~~~  317 (320)
T KOG0752|consen  257 KYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYEILKDLLRLLK  317 (320)
T ss_pred             cccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHHHHHHHhhccc
Confidence            2   335567999999999999999999999999999999999999999999998776543

>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query315
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-17
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-14
1okc_A 297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 9e-05
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure 
Iteration: 1

 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 14/285 (4%)
Query: 33  PLDVIKTRLQVHGLPK---LTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLPN 89
           PLD  K RLQ+ G  +    T  + +   ++G++  + + EG R +Y GL   +   +  
Sbjct: 21  PLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSF 80
Query: 90  WAVYFTMYEQLKSFLCSEDKNHHLSXXXXXXXXXXXXXXXXXXXXPLWVVKTRLQTQGMK 149
            +V   +Y+ +K F      + H                      P  VVK R Q Q   
Sbjct: 81  ASVRIGLYDSVKQFY--TKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA 138
Query: 150 AGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHV-AIQFPTYEKIKMHLADQGNT 208
            G   Y+ST+ A   IA+EEGIRGL+ G  P +A  + V   +  TY+ IK  L  + N 
Sbjct: 139 GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLL-KANL 197
Query: 209 SMDKLXXXXXXXXXXXXKIFAST-LTYPHEVVRSRLQEQGHHSEKRYSGVVDCIKKVFQQ 267
             D L              F +T +  P +VV++R     + +  +Y     C   + ++
Sbjct: 198 MTDDLPCHFTSAFGAG---FCTTVIASPVDVVKTRYM---NSALGQYHSAGHCALTMLRK 251
Query: 268 EGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDPQP 312
           EG   FY+G   + LR     V+ F ++E + R L++ +     P
Sbjct: 252 EGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAP 296
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query315
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-86
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-39
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-38
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 8e-17
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 8e-11
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-86
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-49
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-37
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  261 bits (669), Expect = 1e-86
 Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 12/300 (4%)

Query: 19  AGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSL---IVGSLEQIFQKEGLRGM 75
               A  IA     PLD  K RLQ+ G  +    T   +    ++G++  + + EG R +
Sbjct: 7   GAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSL 66

Query: 76  YRGLSPTVLALLPNWAVYFTMYEQLKSFLCSEDKNHHLSVGANVIAAAVAGAATTIATNP 135
           Y GL   +   +   +V   +Y+ +K F      + H  +G+ ++A +  GA       P
Sbjct: 67  YNGLVAGLQRQMSFASVRIGLYDSVKQFYT--KGSEHAGIGSRLLAGSTTGALAVAVAQP 124

Query: 136 LWVVKTRLQTQGMKAGVVPYRSTLSALSRIAQEEGIRGLYSGLVPALAGISHV-AIQFPT 194
             VVK R Q Q    G   Y+ST+ A   IA+EEGIRGL+ G  P +A  + V   +  T
Sbjct: 125 TDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVT 184

Query: 195 YEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRY 254
           Y+ IK  L      + D L       ++  +    + +  P +VV++R          +Y
Sbjct: 185 YDLIKDTLLKANLMT-DDLPCH--FTSAFGAGFCTTVIASPVDVVKTRYMNSAL---GQY 238

Query: 255 SGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSYFPPDPQPHT 314
                C   + ++EG   FY+G   + LR     V+ F ++E + R L++ +     P  
Sbjct: 239 HSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQSREAPFH 298
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query315
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=5.7e-56  Score=384.01  Aligned_cols=288  Identities=24%  Similarity=0.398  Sum_probs=241.7

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhhchHHHHHHHHhccCCCCCCCCCcCcccHHHHHHHHHHhhchhhccccchhhhhhhcc
Q 021276            9 NSKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLP   88 (315)
Q Consensus         9 ~~~~~~~~~~~g~~a~~~~~~i~~Pld~~k~~~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~l~~G~~~~~~~~~~   88 (315)
                      ++.+....+++|++||+++.++++|+|++|+|+|++...........+.+.++++++++++||++|||||+.+++++.++
T Consensus         3 ~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~   82 (297)
T 1okc_A            3 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   82 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHH
Confidence            34577889999999999999999999999999999864322222234456999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHhhccCCC-CCC--CchHHHHHHHHHHHHHHHHhhccHHHHHHHHhhcCCCC-CCcCCCcHHHHHHH
Q 021276           89 NWAVYFTMYEQLKSFLCSEDK-NHH--LSVGANVIAAAVAGAATTIATNPLWVVKTRLQTQGMKA-GVVPYRSTLSALSR  164 (315)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~g~~ag~~~~~i~~P~d~ik~r~~~~~~~~-~~~~~~~~~~~~~~  164 (315)
                      ..+++|.+||.+++.+....+ ...  ......+++|++||+++.++++|+|+||+|+|.+.... ....|++.++++++
T Consensus        83 ~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~  162 (297)
T 1okc_A           83 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK  162 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHH
Confidence            999999999999995433221 111  23457889999999999999999999999999985322 23468999999999


Q ss_pred             HHHhhChhhhccchhhhhcc-hhhhhhhHhhHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHHHhhhcccHHHHHHHH
Q 021276          165 IAQEEGIRGLYSGLVPALAG-ISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRL  243 (315)
Q Consensus       165 i~~~~G~~~ly~G~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~Pld~ik~r~  243 (315)
                      |+++||+++||||+.+++++ ++..+++|.+||.+++.+.+.     +..+....+++|+++|++++++++|+|+||+||
T Consensus       163 i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~-----~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~  237 (297)
T 1okc_A          163 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-----KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM  237 (297)
T ss_dssp             HHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-----GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC-----CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence            99999999999999999997 679999999999999976432     224567778999999999999999999999999


Q ss_pred             hhcCCC--CCCCCCCHHHHHHHHHHhcCccccccchhhhHhhhccchhhHHHHHHHHHHHh
Q 021276          244 QEQGHH--SEKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFL  302 (315)
Q Consensus       244 q~~~~~--~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~~~~~  302 (315)
                      |.+...  ....|.++++|+++++++||++|||||+.++++|. +..++.|.+||.+++++
T Consensus       238 q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          238 MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV  297 (297)
T ss_dssp             HTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred             hhcCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence            997542  23579999999999999999999999999999996 56789999999988764
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 315
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-43
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-23
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-18
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score =  148 bits (374), Expect = 2e-43
 Identities = 65/286 (22%), Positives = 117/286 (40%), Gaps = 11/286 (3%)

Query: 19  AGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRG 78
           AG  A  I+ T V P++ +K  LQV    K  +   +   I+  + +I +++G    +RG
Sbjct: 12  AGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRG 71

Query: 79  LSPTVLALLPNWAVYFTMYEQLKSFL---CSEDKNHHLSVGANVIAAAVAGAATTIATNP 135
               V+   P  A+ F   ++ K          K        N+ +   AGA +     P
Sbjct: 72  NLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYP 131

Query: 136 LWVVKTRLQTQGMKAGVVP-YRSTLSALSRIAQEEGIRGLYSGLVPALAGISHVAIQFPT 194
           L   +TRL     K      +    + +++I + +G+RGLY G   ++ GI      +  
Sbjct: 132 LDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFG 191

Query: 195 YEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGHH--SEK 252
                  +          +S     + +      A  ++YP + VR R+  Q     ++ 
Sbjct: 192 VYDTAKGMLPDPKNVHIIVS----WMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADI 247

Query: 253 RYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMI 298
            Y+G VDC +K+ + EG   F++G  +N+LR    A      ++ I
Sbjct: 248 MYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGA-FVLVLYDEI 292
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query315
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=8.8e-52  Score=355.23  Aligned_cols=284  Identities=25%  Similarity=0.391  Sum_probs=246.8

Q ss_pred             CchhhHHHHHHHHHHHHHHHHhhchHHHHHHHHhccCCCCCCCCCcCcccHHHHHHHHHHhhchhhccccchhhhhhhcc
Q 021276            9 NSKGILCNAGAGAAAGIIAATFVCPLDVIKTRLQVHGLPKLTNGTVKGSLIVGSLEQIFQKEGLRGMYRGLSPTVLALLP   88 (315)
Q Consensus         9 ~~~~~~~~~~~g~~a~~~~~~i~~Pld~~k~~~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~l~~G~~~~~~~~~~   88 (315)
                      ...+++.++++|++|++++.+++||||++|+|+|++.............+.++++++++++||+++||||+.+.+++..+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            45789999999999999999999999999999999876544444455567999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHhhccCCCCCC---CchHHHHHHHHHHHHHHHHhhccHHHHHHHHhhcCCCC-CCcCCCcHHHHHHH
Q 021276           89 NWAVYFTMYEQLKSFLCSEDKNHH---LSVGANVIAAAVAGAATTIATNPLWVVKTRLQTQGMKA-GVVPYRSTLSALSR  164 (315)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~ag~~~~~i~~P~d~ik~r~~~~~~~~-~~~~~~~~~~~~~~  164 (315)
                      ...++|.+|+.+++.+........   ......+.+|.+|++++.++++|+|++|+|+|.+.... ..+.|.+..+++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~  161 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK  161 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHH
Confidence            999999999999998876543222   23446788999999999999999999999999986543 33468899999999


Q ss_pred             HHHhhChhhhccchhhhhcc-hhhhhhhHhhHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHHHhhhcccHHHHHHHH
Q 021276          165 IAQEEGIRGLYSGLVPALAG-ISHVAIQFPTYEKIKMHLADQGNTSMDKLSARDVAVASSVSKIFASTLTYPHEVVRSRL  243 (315)
Q Consensus       165 i~~~~G~~~ly~G~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~Pld~ik~r~  243 (315)
                      ++++||+++||+|+.+++++ +++.+++|..||.+|+.+.+..     .......+++++++++++++++||+||||+||
T Consensus       162 ~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~  236 (292)
T d1okca_         162 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK-----NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRM  236 (292)
T ss_dssp             HHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG-----CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccchhhhhccccccccceehHhhhhhhhccchhhhccccc-----ccchHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence            99999999999999999996 6799999999999998665433     34567788999999999999999999999999


Q ss_pred             hhcCCCC--CCCCCCHHHHHHHHHHhcCccccccchhhhHhhhccchhhHHHHHHHH
Q 021276          244 QEQGHHS--EKRYSGVVDCIKKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMI  298 (315)
Q Consensus       244 q~~~~~~--~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~y~~~  298 (315)
                      |.+....  ...|.++++|+++++++||++|||||+.++++|.++ .++.|.+||.+
T Consensus       237 q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         237 MMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             HhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9986533  357899999999999999999999999999999766 57889999963
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure